View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17082_high_13 (Length: 454)
Name: NF17082_high_13
Description: NF17082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17082_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 8932389 - 8931955
Alignment:
| Q |
1 |
tgtgtctccaatgaagcccatggatagaatttccttcataatttgagctcaaaatgaacttctgttctggaatccttttaaacacaaattgaaaattttg |
100 |
Q |
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|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8932389 |
tgtgtctccaatgaagcctatggacagaatttccttcataatttgagctcaaaatgaacttctgttctggaatccttttaaacacaaattgaaaattttg |
8932290 |
T |
|
| Q |
101 |
gatagttctgcagctgttttcccatgaaattctaccataagcaaattatttctgaatattannnnnnngattgagtttccaataattaatttcacaaacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
8932289 |
gatagttctgcagctgttttcccatgaaattctaccataagcaaattatttctgaatattatttttttgattgagtttccaataattaatttcacaaacc |
8932190 |
T |
|
| Q |
201 |
aaagattagtctattgttcttgttctcttgctatcaaatgaatatgttgttgcaatgttttgctcccatgataacttgaaaaggtttgtttgataattta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
8932189 |
aaagattagtctattgttcttgttctcttgctatcaaatgaatatgttgttgcaatgttttgctcccatgataacttgaaaaggtttgtttgattattta |
8932090 |
T |
|
| Q |
301 |
ttctatcaaatgctgcttgtattgaccattttacagcgaggttttgatttgctacattgagtttatatgtttagtagacatggtttgctgtcttactttg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
8932089 |
ttctatcaaatgctgcttgtattgaccattttacagcgaggttttgatttgctacattgagtttatttgtttagtagacatggtttgctgtcttactttg |
8931990 |
T |
|
| Q |
401 |
atgtaatccaattattggactaataaccattttac |
435 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
8931989 |
atgtaatccaattattggactaataaccattttac |
8931955 |
T |
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