View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17082_high_34 (Length: 300)
Name: NF17082_high_34
Description: NF17082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17082_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 26438718 - 26438991
Alignment:
| Q |
11 |
gtaaactggtttccaccaagatataactttgataatgatgacaaagaataacaccattgtggaattgtaccattcagtaaattattgtacaaatataaat |
110 |
Q |
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| T |
26438718 |
gtaaactggtttccactgagatataactctaataatgatgataaagaataacaccattgtggaattgtaccattcagtaaattattggacaaatataaat |
26438817 |
T |
|
| Q |
111 |
actttaaatttgaaagttcgctaattttatttggaatagggccaaccaatttattgtatgaacaagataaaagttcaagatgagttagaccaaacaatga |
210 |
Q |
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| T |
26438818 |
attttaaatttgaaagtccgctaattttatttggaatagggccaaccaatttattgtccccacaagataaaagttcaagttgagttagaccaaacaatga |
26438917 |
T |
|
| Q |
211 |
tgatggcaattggcctaccaattggttttcgtaaagacgtaaatcttgtagtttgctaagcttaccaaatgaat |
284 |
Q |
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||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
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| T |
26438918 |
tgatggcaattggcctaccaattggttttggtaaagacgtaacagttgtagtttgctaagcttaccaaatgaat |
26438991 |
T |
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