View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17082_high_40 (Length: 282)
Name: NF17082_high_40
Description: NF17082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17082_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 10316055 - 10316312
Alignment:
| Q |
11 |
aatattaatgttagagaaatcttaaatagttaacaaagaatcactttcaagctatgaattgttccaatctctagaatgagcaatttcagtagaataaatg |
110 |
Q |
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| T |
10316055 |
aatattaatgttagagaaatcttaaatagttaacaaagaatcactttcaagccatgaattgttccaatctatagaatgagcaatttcagtagaataaatg |
10316154 |
T |
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| Q |
111 |
gaagctctaatttcatcatgaagagaattagcgatataaatattagtagagaaaacactaataaaagctccagtatgacttccaaaaatgcatccataag |
210 |
Q |
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| T |
10316155 |
gaagctctaatttcatcatgaagagaattagcgatataaatattagtagagaaaacactaataaaagctccagtatgacttccaaaaatgcatccataag |
10316254 |
T |
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| Q |
211 |
tagaaacccatgagagcctttagatgcactattaacgttgcattttatccaataaact |
268 |
Q |
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| T |
10316255 |
tagaaacccatgagagcctttagatgcactattaacgttgcattttatccaataaact |
10316312 |
T |
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