View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17082_high_56 (Length: 250)
Name: NF17082_high_56
Description: NF17082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17082_high_56 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 44431787 - 44432023
Alignment:
| Q |
14 |
aaatcccaaaactccaccgccgttaccattaccattactgtaaccgtcatcggaagccattccatcttcatcttcttcctccaaagcataaatgcaatcc |
113 |
Q |
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| T |
44431787 |
aaatcccaaaactccaccgacgttaccattaccattactgtaaccgtcatcggaagccattccatcttcatcttcttcctccaaagcataaatgcaatcc |
44431886 |
T |
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| Q |
114 |
ctaacactgagtctactctgttcctccgcttgacgctgtttgattctaagatcctcttctctctgtctcgctgatgaagcttgaccaatcgctaattgac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44431887 |
ctaacactgagtctactctgttcctccgcttgacgctgtttgattctaagatcctcttctctctgtctcgctgatgaagcttgaccaatcgctaattgac |
44431986 |
T |
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| Q |
214 |
ctaaattgcgacttacaacacggatctcaaccaacca |
250 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
44431987 |
ctaaattgcgacttacaacacggatctcaaccaacca |
44432023 |
T |
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