View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17082_low_30 (Length: 337)

Name: NF17082_low_30
Description: NF17082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17082_low_30
NF17082_low_30
[»] chr4 (57 HSPs)
chr4 (1-319)||(50514572-50514882)
chr4 (108-298)||(35808374-35808565)
chr4 (133-298)||(55669704-55669870)
chr4 (139-271)||(45688714-45688847)
chr4 (109-271)||(33951638-33951804)
chr4 (109-298)||(26040338-26040521)
chr4 (133-298)||(23765543-23765709)
chr4 (169-298)||(34016626-34016756)
chr4 (133-298)||(41956191-41956357)
chr4 (143-285)||(10100104-10100247)
chr4 (143-255)||(19328950-19329062)
chr4 (139-286)||(51266895-51267043)
chr4 (139-298)||(2362600-2362762)
chr4 (144-298)||(31754914-31755069)
chr4 (160-286)||(32131134-32131261)
chr4 (139-245)||(47188697-47188803)
chr4 (143-286)||(34316712-34316857)
chr4 (133-296)||(30475390-30475554)
chr4 (144-266)||(20811239-20811362)
chr4 (140-298)||(27839284-27839443)
chr4 (141-298)||(26831764-26831921)
chr4 (141-298)||(31168107-31168265)
chr4 (143-256)||(53566971-53567087)
chr4 (133-301)||(54339078-54339246)
chr4 (143-274)||(40436056-40436188)
chr4 (140-245)||(45088042-45088144)
chr4 (148-236)||(32584560-32584648)
chr4 (211-298)||(51290473-51290561)
chr4 (148-239)||(52341581-52341672)
chr4 (148-256)||(35675211-35675319)
chr4 (142-220)||(9693528-9693606)
chr4 (203-272)||(19876187-19876257)
chr4 (139-240)||(15986237-15986338)
chr4 (139-240)||(20456540-20456641)
chr4 (149-272)||(30617930-30618054)
chr4 (149-228)||(1457584-1457663)
chr4 (186-252)||(3769831-3769897)
chr4 (172-242)||(35927309-35927379)
chr4 (139-256)||(31494682-31494799)
chr4 (139-256)||(51018400-51018517)
chr4 (193-256)||(35511201-35511264)
chr4 (201-286)||(31487754-31487840)
chr4 (149-256)||(30199807-30199914)
chr4 (183-242)||(52021047-52021106)
chr4 (148-242)||(966562-966656)
chr4 (183-257)||(13966574-13966648)
chr4 (107-240)||(36486723-36486856)
chr4 (183-240)||(39418155-39418212)
chr4 (148-240)||(39158363-39158455)
chr4 (184-240)||(46823488-46823544)
chr4 (193-240)||(49483122-49483169)
chr4 (198-240)||(11996140-11996182)
chr4 (170-256)||(13498138-13498224)
chr4 (183-256)||(27545877-27545950)
chr4 (192-256)||(23260728-23260793)
chr4 (183-228)||(25928454-25928499)
chr4 (187-240)||(53484634-53484687)
[»] chr3 (40 HSPs)
chr3 (141-298)||(32415542-32415700)
chr3 (137-298)||(36730131-36730293)
chr3 (141-288)||(8847440-8847588)
chr3 (143-305)||(46317461-46317624)
chr3 (144-298)||(8715480-8715634)
chr3 (144-298)||(9067367-9067521)
chr3 (139-286)||(35306303-35306451)
chr3 (140-298)||(44570364-44570523)
chr3 (134-272)||(51817316-51817455)
chr3 (141-298)||(25102300-25102457)
chr3 (149-272)||(4759854-4759978)
chr3 (143-289)||(10854834-10854985)
chr3 (143-307)||(37509086-37509251)
chr3 (143-298)||(29915553-29915709)
chr3 (143-298)||(29964706-29964862)
chr3 (152-298)||(44695649-44695796)
chr3 (134-256)||(12051004-12051126)
chr3 (143-252)||(20227405-20227514)
chr3 (144-267)||(12905292-12905415)
chr3 (143-256)||(52570755-52570870)
chr3 (142-226)||(31647278-31647362)
chr3 (148-265)||(21324496-21324612)
chr3 (199-298)||(1803919-1804019)
chr3 (148-240)||(34060803-34060895)
chr3 (183-272)||(18791-18881)
chr3 (170-240)||(41345977-41346047)
chr3 (183-256)||(18949-19022)
chr3 (149-272)||(45899547-45899672)
chr3 (172-239)||(11316970-11317037)
chr3 (192-236)||(26850535-26850579)
chr3 (183-241)||(34750293-34750351)
chr3 (209-298)||(48136701-48136790)
chr3 (148-256)||(11675293-11675399)
chr3 (183-256)||(39974827-39974900)
chr3 (183-228)||(50420699-50420744)
chr3 (156-231)||(46160500-46160575)
chr3 (186-233)||(49976185-49976232)
chr3 (155-241)||(271202-271288)
chr3 (197-239)||(6822837-6822879)
chr3 (183-240)||(12060096-12060153)
[»] chr1 (53 HSPs)
chr1 (133-298)||(27209696-27209862)
chr1 (146-298)||(34874545-34874698)
chr1 (140-286)||(11385953-11386100)
chr1 (140-298)||(41147453-41147612)
chr1 (139-272)||(4940741-4940875)
chr1 (133-298)||(7190450-7190616)
chr1 (137-298)||(22346212-22346374)
chr1 (143-286)||(49508721-49508864)
chr1 (146-271)||(28277484-28277610)
chr1 (137-298)||(43433744-43433906)
chr1 (150-298)||(47655346-47655495)
chr1 (139-256)||(50154444-50154561)
chr1 (148-271)||(49901906-49902030)
chr1 (141-256)||(6170569-6170684)
chr1 (144-289)||(932141-932287)
chr1 (143-298)||(2125682-2125838)
chr1 (139-298)||(24140744-24140903)
chr1 (149-271)||(33929947-33930070)
chr1 (138-286)||(11385797-11385946)
chr1 (160-271)||(42607326-42607438)
chr1 (142-245)||(47895308-47895411)
chr1 (141-298)||(31975460-31975618)
chr1 (139-272)||(52396414-52396547)
chr1 (172-300)||(4656020-4656149)
chr1 (170-295)||(40845253-40845379)
chr1 (159-298)||(28850885-28851024)
chr1 (175-286)||(32213876-32213988)
chr1 (141-272)||(45721728-45721857)
chr1 (146-272)||(29966800-29966928)
chr1 (159-272)||(50295434-50295549)
chr1 (139-286)||(8244068-8244207)
chr1 (160-298)||(26469557-26469696)
chr1 (183-255)||(41898878-41898950)
chr1 (148-235)||(17402928-17403015)
chr1 (143-256)||(48938611-48938723)
chr1 (148-256)||(51424137-51424245)
chr1 (133-256)||(14331802-14331925)
chr1 (133-256)||(44359690-44359813)
chr1 (148-274)||(40920165-40920294)
chr1 (160-226)||(44286864-44286930)
chr1 (183-272)||(41492924-41493013)
chr1 (133-256)||(43168106-43168229)
chr1 (161-225)||(30222613-30222678)
chr1 (149-235)||(27210705-27210792)
chr1 (198-256)||(5945450-5945508)
chr1 (183-256)||(16691309-16691382)
chr1 (144-256)||(8892789-8892901)
chr1 (145-189)||(9055897-9055941)
chr1 (193-231)||(44043500-44043538)
chr1 (171-216)||(10161024-10161069)
chr1 (183-228)||(46296231-46296276)
chr1 (183-239)||(23328437-23328493)
chr1 (148-228)||(34644145-34644225)
[»] chr7 (55 HSPs)
chr7 (139-298)||(29034658-29034818)
chr7 (146-271)||(24359713-24359839)
chr7 (143-300)||(5240308-5240466)
chr7 (137-274)||(42222190-42222328)
chr7 (160-298)||(40763241-40763380)
chr7 (138-298)||(46478537-46478694)
chr7 (138-271)||(8380411-8380545)
chr7 (109-298)||(27053471-27053662)
chr7 (135-298)||(7322931-7323095)
chr7 (139-298)||(1910215-1910374)
chr7 (137-298)||(8292714-8292876)
chr7 (160-286)||(43567496-43567623)
chr7 (143-272)||(22521561-22521691)
chr7 (149-239)||(29687457-29687547)
chr7 (144-272)||(49069531-49069660)
chr7 (137-272)||(41188790-41188926)
chr7 (173-270)||(3681699-3681797)
chr7 (140-298)||(36279094-36279250)
chr7 (149-298)||(5347950-5348097)
chr7 (158-298)||(30538458-30538596)
chr7 (168-298)||(22707049-22707179)
chr7 (192-286)||(48454812-48454907)
chr7 (160-272)||(43958087-43958200)
chr7 (160-226)||(40194818-40194884)
chr7 (159-285)||(8258634-8258756)
chr7 (169-256)||(46042749-46042835)
chr7 (147-272)||(40066921-40067045)
chr7 (148-233)||(44296945-44297030)
chr7 (171-235)||(31626083-31626147)
chr7 (148-234)||(18529196-18529282)
chr7 (139-236)||(16082473-16082570)
chr7 (183-256)||(32204197-32204270)
chr7 (132-221)||(35404310-35404399)
chr7 (143-240)||(48879645-48879742)
chr7 (136-196)||(29959035-29959095)
chr7 (141-214)||(16957639-16957711)
chr7 (144-240)||(16931867-16931962)
chr7 (144-240)||(16937250-16937345)
chr7 (144-240)||(30388697-30388793)
chr7 (183-255)||(40774264-40774336)
chr7 (193-240)||(4686080-4686127)
chr7 (148-235)||(35239829-35239915)
chr7 (171-241)||(6548533-6548603)
chr7 (140-234)||(10575802-10575896)
chr7 (206-256)||(31360313-31360363)
chr7 (148-221)||(44260558-44260631)
chr7 (148-279)||(1907586-1907717)
chr7 (193-256)||(3720135-3720198)
chr7 (183-234)||(5543061-5543112)
chr7 (193-236)||(35003630-35003673)
chr7 (183-226)||(43189688-43189731)
chr7 (192-255)||(44391019-44391082)
chr7 (183-228)||(18800197-18800242)
chr7 (198-235)||(46423388-46423425)
chr7 (183-235)||(5977757-5977809)
[»] chr5 (48 HSPs)
chr5 (133-295)||(35653236-35653399)
chr5 (133-271)||(34546743-34546882)
chr5 (136-300)||(4421940-4422105)
chr5 (133-298)||(16315512-16315676)
chr5 (144-298)||(35945222-35945377)
chr5 (138-286)||(4962507-4962655)
chr5 (159-298)||(43414042-43414182)
chr5 (142-284)||(25017283-25017426)
chr5 (147-272)||(5151468-5151594)
chr5 (147-299)||(28143100-28143253)
chr5 (140-255)||(13951258-13951373)
chr5 (133-299)||(39567868-39568035)
chr5 (133-254)||(12914140-12914261)
chr5 (141-306)||(8410115-8410281)
chr5 (144-279)||(3639072-3639207)
chr5 (141-264)||(25568304-25568428)
chr5 (173-298)||(37243852-37243977)
chr5 (139-272)||(27823233-27823364)
chr5 (142-245)||(39692984-39693087)
chr5 (160-286)||(338754-338881)
chr5 (172-272)||(1759821-1759922)
chr5 (143-256)||(12068195-12068307)
chr5 (181-272)||(1479140-1479232)
chr5 (111-256)||(39167538-39167683)
chr5 (207-295)||(15915871-15915960)
chr5 (146-209)||(4838259-4838322)
chr5 (148-255)||(20184570-20184677)
chr5 (188-286)||(40099352-40099450)
chr5 (149-235)||(39335454-39335540)
chr5 (169-299)||(10017599-10017727)
chr5 (152-254)||(10406772-10406873)
chr5 (148-240)||(678430-678522)
chr5 (148-256)||(19894798-19894906)
chr5 (183-256)||(38610313-38610386)
chr5 (144-215)||(15915014-15915083)
chr5 (142-216)||(39042096-39042170)
chr5 (172-256)||(6823773-6823858)
chr5 (193-236)||(12349585-12349628)
chr5 (183-234)||(24288502-24288553)
chr5 (183-234)||(24373668-24373719)
chr5 (193-240)||(28599691-28599738)
chr5 (183-221)||(3015106-3015144)
chr5 (183-256)||(3241974-3242047)
chr5 (169-214)||(16899635-16899680)
chr5 (188-240)||(27535114-27535167)
chr5 (195-235)||(5058772-5058812)
chr5 (183-255)||(17168691-17168763)
chr5 (184-240)||(28996229-28996285)
[»] chr2 (45 HSPs)
chr2 (139-274)||(2966511-2966647)
chr2 (139-298)||(6999173-6999333)
chr2 (110-295)||(39085773-39085952)
chr2 (139-285)||(16361537-16361684)
chr2 (140-298)||(39401513-39401671)
chr2 (169-298)||(765128-765258)
chr2 (138-285)||(862559-862707)
chr2 (135-298)||(27495090-27495254)
chr2 (108-273)||(17118376-17118542)
chr2 (138-298)||(17074466-17074626)
chr2 (138-271)||(41436448-41436582)
chr2 (138-298)||(17056036-17056196)
chr2 (138-298)||(17068483-17068643)
chr2 (141-240)||(23685689-23685788)
chr2 (143-285)||(33726355-33726498)
chr2 (168-289)||(17603811-17603933)
chr2 (162-286)||(33864349-33864474)
chr2 (139-235)||(17095108-17095204)
chr2 (133-298)||(1321132-1321299)
chr2 (133-287)||(9201484-9201638)
chr2 (142-217)||(11445379-11445454)
chr2 (143-298)||(44299659-44299815)
chr2 (145-272)||(35445294-35445423)
chr2 (143-256)||(464770-464884)
chr2 (147-256)||(44173099-44173207)
chr2 (146-226)||(15004905-15004985)
chr2 (148-274)||(2239562-2239689)
chr2 (168-300)||(13997880-13998013)
chr2 (148-256)||(34334182-34334290)
chr2 (139-240)||(11659233-11659334)
chr2 (183-283)||(34220639-34220740)
chr2 (183-240)||(747528-747585)
chr2 (139-216)||(33848957-33849034)
chr2 (133-206)||(41890182-41890255)
chr2 (133-256)||(2136401-2136524)
chr2 (148-238)||(29260167-29260257)
chr2 (183-232)||(3454743-3454791)
chr2 (183-256)||(10900271-10900344)
chr2 (181-285)||(43140314-43140419)
chr2 (204-255)||(11445313-11445364)
chr2 (193-236)||(34512671-34512714)
chr2 (192-226)||(8327004-8327038)
chr2 (186-256)||(30831636-30831706)
chr2 (160-226)||(2805373-2805441)
chr2 (201-254)||(37230253-37230306)
[»] chr8 (35 HSPs)
chr8 (146-298)||(19389288-19389441)
chr8 (141-298)||(4989909-4990064)
chr8 (142-271)||(10694781-10694911)
chr8 (158-267)||(18068952-18069062)
chr8 (141-272)||(8018733-8018866)
chr8 (133-271)||(26672755-26672894)
chr8 (149-298)||(21016035-21016185)
chr8 (147-300)||(45337983-45338137)
chr8 (148-266)||(14855394-14855513)
chr8 (160-266)||(26195383-26195490)
chr8 (168-272)||(25249345-25249450)
chr8 (133-256)||(6433509-6433632)
chr8 (162-256)||(6939152-6939246)
chr8 (168-295)||(21016234-21016362)
chr8 (141-271)||(37433239-37433369)
chr8 (112-226)||(33741525-33741637)
chr8 (143-272)||(44874308-44874430)
chr8 (150-245)||(34713953-34714048)
chr8 (188-298)||(5129434-5129545)
chr8 (177-256)||(26892795-26892874)
chr8 (148-270)||(3174436-3174563)
chr8 (148-272)||(7532767-7532890)
chr8 (148-233)||(20212433-20212518)
chr8 (160-242)||(30351583-30351666)
chr8 (139-240)||(39972189-39972290)
chr8 (148-235)||(4308789-4308876)
chr8 (148-207)||(7444258-7444317)
chr8 (133-256)||(38869969-38870092)
chr8 (172-235)||(6396315-6396378)
chr8 (192-255)||(20169309-20169372)
chr8 (148-226)||(35973927-35974005)
chr8 (186-231)||(17320000-17320045)
chr8 (193-226)||(39491858-39491891)
chr8 (148-208)||(5300203-5300263)
chr8 (148-236)||(25381708-25381796)
[»] scaffold0062 (3 HSPs)
scaffold0062 (140-298)||(16750-16908)
scaffold0062 (140-298)||(26918-27076)
scaffold0062 (140-298)||(37084-37242)
[»] chr6 (24 HSPs)
chr6 (142-299)||(7274191-7274349)
chr6 (107-297)||(10855379-10855562)
chr6 (140-256)||(7875202-7875318)
chr6 (141-272)||(12191466-12191598)
chr6 (139-285)||(5578245-5578392)
chr6 (133-298)||(26572060-26572221)
chr6 (140-256)||(7880448-7880564)
chr6 (133-299)||(16437567-16437726)
chr6 (168-272)||(6866915-6867020)
chr6 (133-256)||(8324125-8324248)
chr6 (149-235)||(31220369-31220455)
chr6 (140-209)||(32786041-32786110)
chr6 (191-298)||(29692319-29692427)
chr6 (149-235)||(21186059-21186145)
chr6 (143-256)||(12175535-12175647)
chr6 (211-298)||(32786259-32786346)
chr6 (143-232)||(34780023-34780112)
chr6 (171-272)||(28014638-28014740)
chr6 (187-239)||(1947424-1947476)
chr6 (133-256)||(12226352-12226475)
chr6 (105-166)||(19645941-19645995)
chr6 (141-216)||(29964274-29964349)
chr6 (183-240)||(5029489-5029546)
chr6 (183-256)||(27127528-27127601)
[»] scaffold0002 (1 HSPs)
scaffold0002 (148-245)||(392164-392261)
[»] scaffold0809 (2 HSPs)
scaffold0809 (159-218)||(4705-4764)
scaffold0809 (210-297)||(4249-4337)
[»] scaffold0144 (1 HSPs)
scaffold0144 (132-256)||(39553-39675)
[»] scaffold0050 (1 HSPs)
scaffold0050 (148-226)||(37430-37507)
[»] scaffold2122 (1 HSPs)
scaffold2122 (184-240)||(655-711)


Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 50514882 - 50514572
Alignment:
Q  1 tttttgttgtcctattaacggtaggcaattttccaatatcctctaacgataaatcccaaacaatgggtggcacatggagtacaaattagtctacgatatt 100  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  50514882 tttttgttgtcctattaacggtgggtaattttccaatatcctctaacgataaatcccaaacaatgggtggtacatggagtacaaaatagtctacgatatt 50514783  T
Q  101 tatcttttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaact 200  Q
    ||||||||||||||||||||||||||       ||| || | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  50514782 tatcttttgggtcttgctaaccattg-------ccccgatgtcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaacattttaact 50514690  T
Q  201 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctcta 300  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||| |||||| || ||||||||||    
T  50514689 tttaaaaagttaaatttatcactttttaccatttttcaatgttatatttctattttatcctcttatccaatgtcacaagagcaatggttagcattctcta 50514590  T
Q  301 tcttttaagtagaacaaat 319  Q
    | |||||||||||||||||    
T  50514589 t-ttttaagtagaacaaat 50514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 108 - 298
Target Start/End: Complemental strand, 35808565 - 35808374
Alignment:
Q  108 tgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaa 207  Q
    ||||||||||||||||||| | ||||   | ||| |||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  35808565 tgggtcttgctaaccattgccatcaggagtcaggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaa 35808466  T
Q  208 agttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||||| |||| || ||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  35808465 agttaaatttatcatttttcacaattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 35808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 133 - 298
Target Start/End: Original strand, 55669704 - 55669870
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  ||| ||||||||||| |||||||||||||||||||||||| |||| |||||    
T  55669704 gccctgagggcaatggttaaggaagccaaaagtagcatgtttgcattgtttttaacaacattttgacttttaaaaagttaaatttatcatttttcaccat 55669803  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  55669804 tttccaatgctatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 55669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 45688714 - 45688847
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||    
T  45688714 agggcaatagttaaggaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttca 45688813  T
Q  239 atgctatctttcta-ttttatccccttatccaat 271  Q
    ||||||| |||||| |||||||||||||||||||    
T  45688814 atgctatgtttctatttttatccccttatccaat 45688847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 33951638 - 33951804
Alignment:
Q  109 gggtcttgctaaccattgtcctca---gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaa 205  Q
    |||| |||||||||||||||| ||   ||||| |||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||| ||||||    
T  33951638 gggttttgctaaccattgtccacaattgccctcagggcaatggttaaggaagccaaaattaacatgtttgtattggtttcaacaacattttaatttttaa 33951737  T
Q  206 aaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaat 271  Q
    ||||||||||||||||||||| || |||||||||| |||| |||||| |||||||||||||| ||||    
T  33951738 aaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 298
Target Start/End: Complemental strand, 26040521 - 26040338
Alignment:
Q  109 gggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaa 208  Q
    |||||||||||||||||||||||||        ||| ||||||||||| ||||||||| ||| |||||||| | |||||||| ||||| |||||||||||    
T  26040521 gggtcttgctaaccattgtcctcaga-------gcagtggttaaggaagccaaaagtagcatatttgcattggcttcaacaatattttgacttttaaaaa 26040429  T
Q  209 gttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| ||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  26040428 gttaaacttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 26040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 298
Target Start/End: Original strand, 23765543 - 23765709
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||| |||| ||||||||| | ||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  23765543 gccctcaggacaattgttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcaccat 23765642  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||||||| |||| | ||||||||||||||| ||||   ||| ||||||| || ||||||||    
T  23765643 tttccaatgctatatttcaatttttatccccttatctaatgcaccaaaggcaatggttagcattctc 23765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 298
Target Start/End: Original strand, 34016626 - 34016756
Alignment:
Q  169 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 267  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatccccttatc 34016725  T
Q  268 caatgtcacaagggcaatgattggcattctc 298  Q
    ||||||| ||||| ||||| || ||||||||    
T  34016726 caatgtctcaaggacaatggttagcattctc 34016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 41956357 - 41956191
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| || |||||||||||||||  |||||||| |||||||||||| | |||||||||||||| |||||||||||||||||||||||| |||| | |||    
T  41956357 gccctcagagcaatggttaaggaaggcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcat 41956258  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||| ||| |||||| |||||||| ||||||| ||| | ||||||||||| || ||||||||    
T  41956257 tttccaatgttatatttctatttttatcctcttatccgatgccccaagggcaatggttagcattctc 41956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 285
Target Start/End: Complemental strand, 10100247 - 10100104
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||      
T  10100247 caatggttaagaaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttctaatat 10100148  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaat 285  Q
    ||| ||| || |||||||||||||||| ||||| ||||| ||||    
T  10100147 tatatttatatttttatccccttatccgatgtcccaaggacaat 10100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 19329062 - 19328950
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  19329062 caatggttaaggaaggcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacatttcaccattttccaatgc 19328963  T
Q  243 tatctttctattt 255  Q
    ||| |||||||||    
T  19328962 tatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 51266895 - 51267043
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||| ||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||    
T  51266895 agggcaatgattaaggaagtcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttca 51266994  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    || |||| |||||| ||||||| |||||||||||||  |||| ||||||    
T  51266995 atactatatttctatttttatctccttatccaatgttccaagagcaatg 51267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 2362600 - 2362762
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaactttt--aaaaagttaaatttatcactttttaccattttc 236  Q
    ||||||||||||||||||  ||||||||  ||||||||||| |||| ||||||||||| ||||||  ||||| ||||||||||||||||| |||||||||    
T  2362600 agggcaatggttaaggaagtcaaaagtagtatgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttc 2362699  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||| |||| ||| || |||||||||||||||| ||| | ||||||||||| || ||||||||    
T  2362700 caatactatatttttatttttatccccttatccgatgccccaagggcaatggttagcattctc 2362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 31754914 - 31755069
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| | |||||| |||| ||    
T  31754914 aatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcatttttcaattct 31755013  T
Q  244 atctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || ||| || |||||||||||||||||||  | ||| ||||||| || ||||||||    
T  31755014 atatttatatttttatccccttatccaataccccaatggcaatggttagcattctc 31755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 286
Target Start/End: Original strand, 32131134 - 32131261
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||||| |||| |||||| ||||||    
T  32131134 aaaagtaacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttat 32131233  T
Q  259 ccccttatccaatgtcacaagggcaatg 286  Q
    | | |||||||||||  |||||||||||    
T  32131234 ctctttatccaatgttccaagggcaatg 32131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 47188803 - 47188697
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||    
T  47188803 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgactttttagaagttaaatttatcacttttcaccattttcca 47188704  T
Q  239 atgctat 245  Q
    || ||||    
T  47188703 atactat 47188697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 34316857 - 34316712
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaa-tttatcactttttaccattttccaatg 241  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||| || ||||| |||||    
T  34316857 caatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatg 34316758  T
Q  242 ctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
     ||| ||| || ||||||| |||||||||||| | |||||||||||    
T  34316757 ttatatttatatttttatctccttatccaatgccccaagggcaatg 34316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 30475390 - 30475554
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| || ||||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||| |||||    
T  30475390 gccctcagagcaatagttaaggaagccaaaagtaatatgtttgcattggtttcaacaatattttgacatttaaaaagttaaatttatcacttttcaccat 30475489  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattc 296  Q
    ||| |||| |||| ||| || ||||||| |||||||||||  |  |||||||||| || ||||||    
T  30475490 ttttcaatactatatttttatttttatctccttatccaataccctaagggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 144 - 266
Target Start/End: Original strand, 20811239 - 20811362
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||| ||| ||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| |    
T  20811239 aatggttaaagaagccaaaagtagcatgtttgcattgattttaacaacattttgacttttaaaaagttaaatttatcacttttcaccaatttccaatgtt 20811338  T
Q  244 atctttcta-ttttatccccttat 266  Q
    || |||||| ||||||||||||||    
T  20811339 atatttctatttttatccccttat 20811362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 27839443 - 27839284
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||| |||||||   ||||| || |||||||||||| |||| || |||||||| ||||||||||| |||||||||||| |||| | |||||| |||    
T  27839443 gggcaatgattaaggaggtcaaaaatagcatgtttgcattggttttaataacattttgacttttaaaaacttaaatttatcatttttcatcatttttcaa 27839344  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| |||||| |||||| ||||||||||||| | ||||||||||| || ||||||||    
T  27839343 tgctatatttctatttttattcccttatccaatgccccaagggcaatggttagcattctc 27839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 26831921 - 26831764
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||| ||||| |||  |||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  26831921 ggcaatcgttaaagaagtcaaaagtagcatgtttgcatt-gtttcaacaacattttaatttttaaaaagataaatttatcactttttaccattttacaat 26831823  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
      ||| |||||| |||||||| ||||| ||||| | ||||| ||||  || ||||||||    
T  26831822 attatatttctatttttatcctcttattcaatgccccaaggacaattgttagcattctc 26831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 31168107 - 31168265
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||| ||| |||||||||  |||||| |||| |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||    
T  31168107 ggcaatggttaaagaagccaaaagtagaatgtttacattggtttcaacaacattttgactttaaaaaaattaaatttatcacttttcaccattttccaat 31168206  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||   ||||| |||||||||||| || ||||   ||||||||||  || ||||||||    
T  31168207 gctaaaattctatttttatccccttgtctaatgctccaagggcaatagttagcattctc 31168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 53567087 - 53566971
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttat---cactttttaccattttccaa 239  Q
    |||| |||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||| |||    
T  53567087 caatagttaaggaagtcaaaagtagcatgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaa 53566988  T
Q  240 tgctatctttctatttt 256  Q
    |||||| ||||||||||    
T  53566987 tgctatatttctatttt 53566971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 301
Target Start/End: Original strand, 54339078 - 54339246
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| || |||||||||||||||  |||||||| ||| ||| |||| ||||||| || ||||| ||||||||||| |||||||||||| |||| |||||    
T  54339078 gccctcagagcaatggttaaggaagtcaaaagtagcatatttacattggtttcaaaaatattttgacttttaaaaaattaaatttatca-ttttcaccat 54339176  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctat 301  Q
    ||| ||||| ||| ||| || ||||||||| |||||||||| | ||| | ||||| || |||||||||||    
T  54339177 ttttcaatgttatatttatatttttatccctttatccaatgccccaacgacaatggttagcattctctat 54339246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 143 - 274
Target Start/End: Original strand, 40436056 - 40436188
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||||| ||||| |  ||||||||||||||||||| | |||| | ||||||  |||||    
T  40436056 caatggttaagaaaaccaaaagtagcatgtttgctttggtttcaacaatattttgatatttaaaaagttaaatttattatttttcatcattttttaatgc 40436155  T
Q  243 ta-tctttctattttatccccttatccaatgtc 274  Q
    || | ||||  ||||||||||||||||||||||    
T  40436156 tattttttcatttttatccccttatccaatgtc 40436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 45088042 - 45088144
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||||||||||||||||  |||||||||||  ||||||||   |||| ||||| ||||| ||||||||||||||||| | ||||||||||    
T  45088042 gggcaatggttaaggaaaccaaaagtagtatgtttgcattgatttcaaca---ttttgactttcaaaaaattaaatttatcacttttcatcattttccaa 45088138  T
Q  240 tgctat 245  Q
    ||||||    
T  45088139 tgctat 45088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 32584648 - 32584560
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||||||||||||| |||||||||  ||| || |||||||| |||||||||||||||||||| |||| || ||||||||||||||||    
T  32584648 gttaaggaaaccaaaattaacatgttcccatgagattcaacaatattttaacttttaaaaagttgaattcattactttttaccattttc 32584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 51290473 - 51290561
Alignment:
Q  211 taaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| || ||||||||    
T  51290473 taaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctc 51290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 52341581 - 52341672
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||||| ||  ||||||||||| | |||||||||||||| ||||||||||||||||||| |||| |||| | ||||||||||    
T  52341581 gttaaggaaaccaaaattagtatgtttgcattggattcaacaacattttgacttttaaaaagttaaattcatcatttttcatcattttccaa 52341672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 35675319 - 35675211
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    |||||| ||| ||||||||  |||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||| || |||| ||||| | || |    
T  35675319 gttaagaaaatcaaaagtagtatgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcactatttcccaatacaatat 35675220  T
Q  248 ttctatttt 256  Q
    |||||||||    
T  35675219 ttctatttt 35675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 9693606 - 9693528
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatc 220  Q
    |||||||||||||||  ||||| || |||||||||||| |||||||||| ||||  |||||||||||||||||||||||    
T  9693606 gcaatggttaaggaagtcaaaaatagcatgtttgcattggtttcaacaatatttcgacttttaaaaagttaaatttatc 9693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 19876257 - 19876187
Alignment:
Q  203 taaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 272  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatg 19876187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 15986237 - 15986338
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||||| |||||||  |||||||||||   |||||||| ||| | ||||||||||| ||||||| | ||||||| |||||||| ||    
T  15986237 agggcaatggttaaggaaactaaaagtagaatgtttgcattgaattcaacaatattctgacttttaaaaatttaaattcaccacttttcaccatttttca 15986336  T
Q  239 at 240  Q
    ||    
T  15986337 at 15986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 20456540 - 20456641
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||| ||||||||| |||||||| ||||||||||||   |||||||| |||||||| |||||||| ||||||| || |||||| | |||||| ||    
T  20456540 agggcaatgattaaggaaatcaaaagtagcatgtttgcattgaattcaacaatattttaacatttaaaaatttaaattcataacttttcatcatttttca 20456639  T
Q  239 at 240  Q
    ||    
T  20456640 at 20456641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 30617930 - 30618054
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    ||||||||||||||||||  | | ||||||| | |||||||| |||| |||||||||||||||||||| ||  ||||| | ||||| ||||||| || ||    
T  30617930 ttaaggaaaccaaaagtagtaggattgcattggattcaacaatatttgaacttttaaaaagttaaattcattgcttttcatcatttcccaatgcaatatt 30618029  T
Q  249 tctat-tttatccccttatccaatg 272  Q
    ||||| ||||||| |||| ||||||    
T  30618030 tctatgtttatcctcttaaccaatg 30618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 1457663 - 1457584
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    ||||||||| ||||||||| | |||||||||   |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  1457663 ttaaggaaatcaaaagtaataagtttgcattgaattcaacaatattttaacttttaaaaaattaaatttatcaattttta 1457584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 3769831 - 3769897
Alignment:
Q  186 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta 252  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||| |||||| || ||||||    
T  3769831 aacaatattttaacttttaaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 35927379 - 35927309
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||  |||| ||||||||| |||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaagttaaattcatcgtttttcaccattttctaatgc 35927309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 31494799 - 31494682
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||||||||||||||||||||||| || ||| ||||   ||||||||  ||||  | ||||||||||||||||  |||||||| ||||||| | |    
T  31494799 agggcaatggttaaggaaaccaaaagtaatatatttacattgaattcaacaatgttttgtcatttaaaaagttaaattcttcacttttcaccatttccaa 31494700  T
Q  239 atgctatctttctatttt 256  Q
    || | || ||||||||||    
T  31494699 atacaatgtttctatttt 31494682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 51018517 - 51018400
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||| ||||  |||||||  || ||| ||||   ||||||||  |||||| |||||||||||||||||  |||||||| |||||||| ||    
T  51018517 agggcaatggttaaagaaattaaaagtagtatatttacattgaattcaacaatgttttaatttttaaaaagttaaattcttcacttttcaccatttttca 51018418  T
Q  239 atgctatctttctatttt 256  Q
    |||| || ||||||||||    
T  51018417 atgcaatgtttctatttt 51018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 35511264 - 35511201
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||| | || ||||||||||    
T  35511264 ttttaacttttaaaaagtcaaattcatcacttttcaccattttccaatacaatatttctatttt 35511201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 31487754 - 31487840
Alignment:
Q  201 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    |||||||||| ||||||||||||||| || ||||| ||||||||| ||| || |||||||||||||| |||||   |||||||||||    
T  31487754 tttaaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatg 31487840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 30199914 - 30199807
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    ||||| |||| ||||||||   |||| |||| | ||||| || ||||||||||||||||| |||| || ||||||||||| |||||| |||||| || ||    
T  30199914 ttaagaaaactaaaagtaatgagtttacattggattcaataatattttaacttttaaaaaattaatttcatcactttttatcatttttcaatgcaatatt 30199815  T
Q  249 tctatttt 256  Q
    | ||||||    
T  30199814 tatatttt 30199807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 52021047 - 52021106
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||  |||| ||||||    
T  52021047 ttcaacaatattttaacatttaaaaagttaaatttatcattttttacagtttttcaatgc 52021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 966562 - 966656
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||| ||||||||  |  ||| |||| | |||||||| ||||||| ||||||||||||||||| || | |||||| |||||| ||||||    
T  966562 gttaaggaaatcaaaagtagtagtttttcattggattcaacaatattttaatttttaaaaagttaaattcataattttttatcatttttcaatgc 966656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 13966574 - 13966648
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttta 257  Q
    |||||||| || | |||||||||||||| ||||| || | |||||||||||||||||||| || ||| |||||||    
T  13966574 ttcaacaatatgtcaacttttaaaaagtcaaattcattattttttaccattttccaatgcaatatttatatttta 13966648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 36486856 - 36486723
Alignment:
Q  107 ttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 206  Q
    |||| ||||||||||||||| ||| | | || |||  |||| ||||||||| |||| |||| || ||| |||    ||||| || ||||| |||||||||    
T  36486856 ttggatcttgctaaccattgccctgatctctcaggataatgattaaggaaatcaaacgtaatatatttacatagaattcaataatattttgacttttaaa 36486757  T
Q  207 aagttaaatttatcactttttaccattttccaat 240  Q
    || |||||||  |||||||| |||||||||||||    
T  36486756 aaattaaattcttcacttttcaccattttccaat 36486723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 39418212 - 39418155
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||  |||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  39418212 ttcaacaattttttaacttttaaaaagtcaaacatatcactttttaccattatccaat 39418155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 39158455 - 39158363
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||| ||||||||  |||||| ||||   || ||||| ||||||| ||||||||||||||||  ||||||||| ||| ||| |||||    
T  39158455 gttaaggaaatcaaaagtagtatgtttacattgaattgaacaatattttaatttttaaaaagttaaatagatcacttttcaccctttcccaat 39158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 46823488 - 46823544
Alignment:
Q  184 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||  |||| ||||||||||||||||||| || |||||| |||||||||||||    
T  46823488 tcaacaattttttgacttttaaaaagttaaattcataacttttcaccattttccaat 46823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 49483122 - 49483169
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  49483122 ttttaactttgaaaaagtcaaatctatcacttttcaccattttccaat 49483169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 11996182 - 11996140
Alignment:
Q  198 acttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||| |||||||||| |||||||||| |||||||||||||    
T  11996182 acttttagaaagttaaatctatcacttttcaccattttccaat 11996140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 13498224 - 13498138
Alignment:
Q  170 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||| |||| | ||||||||  |||| ||||||||||||||||||| |||  | ||||| |||||||||| | || ||||||||||    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaattcatcgttctttactattttccaatacaatatttctatttt 13498138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 27545877 - 27545950
Alignment:
Q  183 ttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| ||||||| |||| ||||||||||||| ||||| ||||| |||||| |||||| || ||||||||||    
T  27545877 ttcaacaatattttaagttttcaaaaagttaaattcatcac-ttttatcatttttcaatgcaatatttctatttt 27545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 23260728 - 23260793
Alignment:
Q  192 attttaacttttaaaaagttaaatttatca-ctttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||  |||||| || ||| ||||||    
T  23260728 attttaacttttaaaaagttaaattcatcagcttttcaccatttctcaatgcaatatttttatttt 23260793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 25928454 - 25928499
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    |||||||| |||||||| ||||||| |||||||| |||||||||||    
T  25928454 ttcaacaatattttaacatttaaaacgttaaattcatcacttttta 25928499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 53484634 - 53484687
Alignment:
Q  187 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||||| ||||||||||| |||  ||||| ||||||| ||||    
T  53484634 acaacattttaacttttagaaagttaaattcatctttttttcccatttttcaat 53484687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 32415542 - 32415700
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| || ||||| ||||    
T  32415542 ggcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatgacttttcacaatttttcaat 32415641  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||| |||||| ||||||||| |||||||||| | ||||||||||||||  |||||||    
T  32415642 gctatatttctatttttatccctttatccaatgcctcaagggcaatgattaacattctc 32415700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 137 - 298
Target Start/End: Complemental strand, 36730293 - 36730131
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||     
T  36730293 tgagggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttt 36730194  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||| |||| ||| || |||||||||||||||||||| || |||||||||| || ||||||||    
T  36730193 caatactatatttatatttttatccccttatccaatgccataagggcaatggttagcattctc 36730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 141 - 288
Target Start/End: Complemental strand, 8847588 - 8847440
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8847588 ggcaatggttaaggaaaccaaaagtagcatgtttacattgttttcaacaatattttaacttttaaaaagttaaattaatcactttttaccattttccaat 8847489  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgat 288  Q
    | ||| |||||| |||||||||||||||||||||| |||| ||||||||    
T  8847488 gttatatttctatttttatccccttatccaatgtcccaagtgcaatgat 8847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 143 - 305
Target Start/End: Original strand, 46317461 - 46317624
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||     
T  46317461 caatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgt 46317560  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatcttt 305  Q
    ||| |||||| |||||||  ||||||||||||| ||||||||||| || |||||| || |||||    
T  46317561 tatatttctatttttatctacttatccaatgtctcaagggcaatggttagcattccctttcttt 46317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 144 - 298
Target Start/End: Complemental strand, 8715634 - 8715480
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  8715634 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgct 8715535  T
Q  244 atctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || ||||||||||  |||||||||||||| |  |||| ||||| || ||||||||    
T  8715534 atatttctatttttaccccttatccaatgccctaaggacaatggttagcattctc 8715480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 144 - 298
Target Start/End: Complemental strand, 9067521 - 9067367
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  9067521 aatggttaaggaagctaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgct 9067422  T
Q  244 atctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || ||||||||||  |||||||||||||| |  |||| ||||| || ||||||||    
T  9067421 atatttctatttttaccccttatccaatgccctaaggacaatggttagcattctc 9067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 35306303 - 35306451
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||| |||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  35306303 agggcaatgcttaaggaaaccaaaagtagcatgtttgcattgatttcaataacattttaacttttaaaaagttaaatttatcacttttcatcattttcca 35306402  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    ||| ||| |||||| |||||||||||||||||||  | |||||||||||    
T  35306403 atgttatatttctatttttatccccttatccaattgcccaagggcaatg 35306451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 44570523 - 44570364
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  44570523 gggcaatggttaaggaagccaaaagtagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaagttatcacttttcaccattttccaa 44570424  T
Q  240 tgctatctttctatttt-atccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || ||| |||||||||| ||||| ||||| |||| | ||||||||||| || ||||||||    
T  44570423 tgttatatttctattttgatccctttatcgaatgccccaagggcaatggttagcattctc 44570364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 51817455 - 51817316
Alignment:
Q  134 ccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 233  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  51817455 ccctgagggcaatggttaaggaagccaaaagtagcatgtttgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccatt 51817356  T
Q  234 ttccaatgctatctttcta-ttttatccccttatccaatg 272  Q
    |||||||||||| ||| || |||||||| ||||| |||||    
T  51817355 ttccaatgctatatttttatttttatcctcttattcaatg 51817316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 141 - 298
Target Start/End: Complemental strand, 25102457 - 25102300
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  25102457 ggcaatagttaaggaaaccaaaagtagcatatttgcattggtttcaacaatattttaactttaaaaaaatt-aatttatcactttttaccattttccaat 25102359  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||| |||||| ||||||| | |||||||||||| ||||||||||| || ||||||||    
T  25102358 gctatatttctatttttatctcattatccaatgtcccaagggcaatggttagcattctc 25102300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 4759978 - 4759854
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  4759978 ttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatgctatatt 4759879  T
Q  249 tcta-ttttatccccttatccaatg 272  Q
    |||| ||||||||| ||||||||||    
T  4759878 tctatttttatccctttatccaatg 4759854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 143 - 289
Target Start/End: Original strand, 10854834 - 10854985
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  10854834 caatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttattagttttcaccattttccaatgc 10854933  T
Q  243 tatctttctatttt-----atccccttatccaatgtcacaagggcaatgatt 289  Q
    ||| |||||| |||     |||||||||||||||| | ||||||||||||||    
T  10854934 tatatttctacttttatccatccccttatccaatgccccaagggcaatgatt 10854985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 307
Target Start/End: Original strand, 37509086 - 37509251
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||  |||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  37509086 caatggttaaggaagtcaaaagtaacatatttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatgc 37509185  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatctttta 307  Q
    |   |||| | |||||||||||||||||||| | ||| ||||||| || |||||||| || |||||    
T  37509186 tgcatttcaatttttatccccttatccaatgccccaaaggcaatggttagcattctcaatttttta 37509251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 298
Target Start/End: Complemental strand, 29915709 - 29915553
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||| |||||||| |||||||||  ||||||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |    
T  29915709 caatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatac 29915610  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| ||| || |||||||||||||||||| | | ||||||||||| || ||||||||    
T  29915609 tatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctc 29915553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 298
Target Start/End: Complemental strand, 29964862 - 29964706
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||| |||||||| |||||||||  ||||||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||| |    
T  29964862 caatgattaaggaagccaaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatac 29964763  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| ||| || |||||||||||||||||| | | ||||||||||| || ||||||||    
T  29964762 tatatttttatttttatccccttatccaacgccccaagggcaatggttagcattctc 29964706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 44695796 - 44695649
Alignment:
Q  152 aggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct 251  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||   ||| ||| |    
T  44695796 aggaagccaaaagtaacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcatttttcaccattttccaagattatatttat 44695697  T
Q  252 a-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | |||||||||||||||||||||| ||| | |||||||| ||||||||    
T  44695696 atttttatccccttatccaatgtcccaatgacaatgattagcattctc 44695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 12051004 - 12051126
Alignment:
Q  134 ccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 233  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||| |  |||    
T  12051004 ccctcagggcaatggttaaggaagccaaaagtagcatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcatttttcattatt 12051103  T
Q  234 ttccaatgctatctttctatttt 256  Q
    || |||| |||| ||||||||||    
T  12051104 ttacaatactatatttctatttt 12051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 20227514 - 20227405
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||| ||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||| ||||||    
T  20227514 caatgattaaggaagtcaaaagtaacatgtttgtattggtttcaataacattttaacttttaagaagttaaatttatcacttttcatcatttttcaatgc 20227415  T
Q  243 tatctttcta 252  Q
    ||| ||||||    
T  20227414 tatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 12905415 - 12905292
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||| |||||||| | ||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| ||||| |    
T  12905415 aatgattaaggaagcaaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaatgttaaatttatcatttttcaccatttt-caatgtt 12905317  T
Q  244 atctttcta-ttttatccccttatc 267  Q
    || |||||| |||||||||||||||    
T  12905316 atatttctatttttatccccttatc 12905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 52570755 - 52570870
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacat--gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||  ||||||||| |||  ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  52570755 caatggttaaggatgccaaaagtagcatatgtttgcattggtttcaacaatattttgacttttaaaaagttatatttatcacttttcaccattttccaat 52570854  T
Q  241 gctatctttctatttt 256  Q
     |||| ||||||||||    
T  52570855 actatatttctatttt 52570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 31647278 - 31647362
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||| |||||||| |||||||||||||||||||||||| ||||    
T  31647278 gcaatggttaaggaagccaaaagtagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttt 31647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 21324496 - 21324612
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||| ||||| |||||||| ||| ||||||  | |||||||| |||||||||||||||||||||||| |||||||||| | || |||||||||| || |    
T  21324496 gttaaagaaactaaaagtaatatgattgcatcggattcaacaatattttaacttttaaaaagttaaatctatcacttttcatca-tttccaatgcaatat 21324594  T
Q  248 ttctattttatcccctta 265  Q
    ||||||||||||| ||||    
T  21324595 ttctattttatccgctta 21324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 1803919 - 1804019
Alignment:
Q  199 cttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 297  Q
    |||||| |||||||||||||||| |||||||| |||| ||||  ||| |||||| |||||||||||||||||||| | ||||| |||||||| |||||||    
T  1803919 cttttacaaagttaaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattct 1804018  T
Q  298 c 298  Q
    |    
T  1804019 c 1804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 34060895 - 34060803
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||  |||||||   ||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  34060895 gttaaggaaattaaaagtagtttgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcaccatttttcaat 34060803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 18881 - 18791
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 272  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || |||||| |||||||| |||| ||||||    
T  18881 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatg 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 41345977 - 41346047
Alignment:
Q  170 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| || ||||| ||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaaaattaaatttattacttttcactatttttcaat 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 19022 - 18949
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||| ||||||| || ||||||||||    
T  19022 ttcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttt 18949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 45899672 - 45899547
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttt-accattttccaatgctatct 247  Q
    ||||||||||||||||||  |||||| ||||   |||||||| ||||| ||||||||||| ||||||| |||||||||| | |||||||||||   || |    
T  45899672 ttaaggaaaccaaaagtagtatgtttacattgaattcaacaatattttgacttttaaaaatttaaattcatcactttttcatcattttccaatataatat 45899573  T
Q  248 ttcta-ttttatccccttatccaatg 272  Q
    ||||| |||||| | |||||||||||    
T  45899572 ttctatttttattctcttatccaatg 45899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 11316970 - 11317037
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||| ||||| || ||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaagttaaattcataacttttcaccattttccaa 11317037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 26850579 - 26850535
Alignment:
Q  192 attttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  26850579 attttaacttttaaaaaattaaattcatcactttttaccattttc 26850535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 34750351 - 34750293
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    |||||||| ||||||| || |||||||||||||| ||||||||| |||| |||||||||    
T  34750351 ttcaacaatattttaatttataaaaagttaaattcatcacttttcaccagtttccaatg 34750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Complemental strand, 48136790 - 48136701
Alignment:
Q  209 gttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||||||  | ||||| ||||| || ||||||||    
T  48136790 gttaaatttatcactttc-acaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctc 48136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 11675293 - 11675399
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||||||||||||||||   | ||| ||||| | |||||||| ||||| || ||||||||||||||||  |||  |||||||||||| |||| | || |    
T  11675293 gttaaggaaaccaaaagtggtaggttagcattggattcaacaatattttgacatttaaaaagttaaattcgtca--ttttaccatttttcaatacaatat 11675390  T
Q  248 ttctatttt 256  Q
    |||||||||    
T  11675391 ttctatttt 11675399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 39974900 - 39974827
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||  ||||||||||||||||||||||||| ||||||| | | ||||||| ||||| || ||| ||||||    
T  39974900 ttcaacactattttaacttttaaaaagttaaattcatcacttctcatcattttctaatgcaatatttttatttt 39974827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 50420699 - 50420744
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||    
T  50420699 ttcaacaattttttaacttttaaaaagttaaatctatcacttttta 50420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 46160500 - 46160575
Alignment:
Q  156 aaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 231  Q
    |||||||||||  ||||| ||||||| ||||||||  ||||||| ||| |||||||| ||| ||||||||| ||||    
T  46160500 aaccaaaagtagtatgttcgcattagattcaacaattttttaaccttttaaaagttacattcatcacttttcacca 46160575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 49976232 - 49976185
Alignment:
Q  186 aacaacattttaacttttaaaaagttaaatttatcactttttaccatt 233  Q
    ||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  49976232 aacaatattttgacttttaaaaagttaaattcatcacttttcaccatt 49976185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 271288 - 271202
Alignment:
Q  155 aaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    ||||||||||||  | ||||| ||| | ||||||||  |||||||||||||||||| ||||| || | |||||| | ||||||||||    
T  271288 aaaccaaaagtagaaagtttgtattggattcaacaatgttttaacttttaaaaagtcaaattcattattttttatcgttttccaatg 271202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 6822879 - 6822837
Alignment:
Q  197 aacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||| |||| |||||||||||||| |||||||    
T  6822879 aacttttaaaaagttgaattcatcactttttaccactttccaa 6822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 12060153 - 12060096
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||  |||||||||||||||| | |||| |||||||||| | |||||||||||    
T  12060153 ttcaacaattttttaacttttaaaaactcaaatctatcacttttcatcattttccaat 12060096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 27209862 - 27209696
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27209862 gccctgagggcaatggttaaggaagccaaaagtaggatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcaattttcaccat 27209763  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||| ||| |||||| ||||||||| |||||||||| | ||||| ||||| || ||||||||    
T  27209762 tttccaatgttatatttctatttttatccctttatccaatgccccaaggacaatggttagcattctc 27209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 298
Target Start/End: Original strand, 34874545 - 34874698
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  34874545 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgctat 34874644  T
Q  246 ctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
     |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  34874645 atttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 34874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 140 - 286
Target Start/End: Original strand, 11385953 - 11386100
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11385953 gggcaatggttaagaaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaatttttaccattttccaa 11386052  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    |||||| |||||| ||||||||  ||||| |||||| ||||| |||||    
T  11386053 tgctatatttctatttttatccaattatctaatgtcccaaggacaatg 11386100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 41147612 - 41147453
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||| |||    
T  41147612 gggcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattaatcattttttaccatttttcaa 41147513  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  41147512 tgctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 41147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 4940875 - 4940741
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||| |||||||||||||||| || |||||||| ||| |||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4940875 agggcaatagttaaggaaaccaaaaatagcatgtttgtattggttttaacaatattttgacttttaaaaagttaaatttatcacttttaaccattttcca 4940776  T
Q  239 atgctatctttcta-ttttatccccttatccaatg 272  Q
    ||||||| |||||| ||||||||||||||||||||    
T  4940775 atgctatatttctatttttatccccttatccaatg 4940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 7190616 - 7190450
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||| |||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  7190616 gcccttaggacaatggttaaggaagctaaaagtagcatgtttgcattagtttcaacaccattttaacttttaaaaagttaaatttatcacttttcatcat 7190517  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||  |||||||| |||||| |||||||| |||| |||||| | ||||||||| | || ||||||||    
T  7190516 ttttgaatgctatatttctatttttatcctcttaaccaatgccccaagggcaaaggttagcattctc 7190450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 298
Target Start/End: Complemental strand, 22346374 - 22346212
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||     
T  22346374 tgaggacaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaaattaaatttatcacttttcaccattttt 22346275  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||| |||| |||||| |||||| ||||||||||| | | ||||||||||| || ||||||||    
T  22346274 caatactatatttctatttttattcccttatccaaagccccaagggcaatggttagcattctc 22346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 49508864 - 49508721
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||| ||| ||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  49508864 caatggttaaagaagccaaaagtagcatgtttgcattggtttcgacaatattttgacttttaaaaagttaaatttatcac-tttcaccattttccaatgc 49508766  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    ||| |||||| |||||||||||||||||||| | |||||||||||    
T  49508765 tatatttctatttttatccccttatccaatgccccaagggcaatg 49508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 28277610 - 28277484
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||    
T  28277610 tggttaaggaaatcaaaagtaacatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcactttttatcatttttcaatgttat 28277511  T
Q  246 ctttcta-ttttatccccttatccaat 271  Q
     |||||| |||||||| ||||||||||    
T  28277510 atttctatttttatcctcttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 298
Target Start/End: Original strand, 43433744 - 43433906
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||| ||||||||||||| |||||||||  ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||     
T  43433744 tgagggtaatggttaaggaagccaaaagtagtatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttt 43433843  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
     ||| |||| |||||| |||||||||||||||||||| | |||| |||||  || ||||||||    
T  43433844 taatactatatttctatttttatccccttatccaatgccccaagagcaatagttagcattctc 43433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 47655495 - 47655346
Alignment:
Q  150 taaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatcttt 249  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||  ||    
T  47655495 taaggaaggcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaattttcaccatttttcaatgctatactt 47655396  T
Q  250 cta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| |||||||||||||| |||||||  |||||||||| || ||||||||    
T  47655395 ctatttttatccccttattcaatgtcttaagggcaatggttagcattctc 47655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 50154444 - 50154561
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||    
T  50154444 agggtaatggttaaggaagccaaaagtaacatgtttgcattggtttcaacaacattttaacttttaaaaggttaaatttatcattttttatcatttttca 50154543  T
Q  239 atgctatctttctatttt 256  Q
    ||||||| ||| ||||||    
T  50154544 atgctatatttatatttt 50154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 49901906 - 49902030
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |    
T  49901906 gttaaggaagccaaaagtatcatgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaatttatcacttttcaccattttccaatactatat 49902005  T
Q  248 ttcta-ttttatccccttatccaat 271  Q
    ||||| |||||||| ||||||||||    
T  49902006 ttctatttttatcctcttatccaat 49902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 6170684 - 6170569
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||  | ||||||||||    
T  6170684 ggcaatggttaaggaagtcaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttctctattttccaat 6170585  T
Q  241 gctatctttctatttt 256  Q
    ||||| ||||||||||    
T  6170584 gctatatttctatttt 6170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 144 - 289
Target Start/End: Complemental strand, 932287 - 932141
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||||||||||||   ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||| | ||||||||||||||    
T  932287 aatggttaaggaaggtaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaaattaaatttataatttttcatcattttccaatgct 932188  T
Q  244 atctttcta-ttttatccccttatccaatgtcacaagggcaatgatt 289  Q
    || |||||| |||||||||||||||||||| | ||||  ||||||||    
T  932187 atatttctatttttatccccttatccaatgccccaagaacaatgatt 932141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 298
Target Start/End: Complemental strand, 2125838 - 2125682
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||| |||  ||||||||||||| ||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||    
T  2125838 caatggttaaagaagtcaaaagtaacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaatttatcacttttcacaatttttcaatgc 2125739  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| |||||| |||||||||||||||||||| | ||||  ||||| || ||||||||    
T  2125738 tatatttctatttttatccccttatccaatgccccaagaacaatggttagcattctc 2125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 24140744 - 24140903
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||    
T  24140744 agggcaatggttaaggaagccaaaaatagcatgtttgcattggtttcaacaacattttgactttaaaaaagttaagtttatcacgtttcaccattttcca 24140843  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||  ||| |||||| |||||||||||||| ||||| | ||| ||||||| || ||||||||    
T  24140844 atagtatatttctatttttatccccttat-caatgccccaaaggcaatggttagcattctc 24140903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 271
Target Start/End: Original strand, 33929947 - 33930070
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||||||| ||    
T  33929947 ttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcagttttcactatttttcaatgctatatt 33930046  T
Q  249 tcta-ttttatccccttatccaat 271  Q
    | || |||||||||||||||||||    
T  33930047 tatatttttatccccttatccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 11385946 - 11385797
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||||||  ||| ||||| |||   | |||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  11385946 gagggcaatggttaaggatgccataagtagcattcctacattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttcc 11385847  T
Q  238 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    ||| |||| |||||| ||||||||||||||||||||   |||||||||||    
T  11385846 aatactatatttctatttttatccccttatccaatgctgcaagggcaatg 11385797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 42607438 - 42607326
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||| ||| || ||||||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttat 42607339  T
Q  259 ccccttatccaat 271  Q
    |||||||||||||    
T  42607338 ccccttatccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 47895308 - 47895411
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||| |||||||| ||||     
T  47895308 gcaatggttaaggaagccaaaagtaacatgtttgcattagtttcaacaatattttgacatttaaaaagttaaatttatcacctttcaccatttttcaata 47895407  T
Q  242 ctat 245  Q
    ||||    
T  47895408 ctat 47895411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 31975460 - 31975618
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||| || | |||| |||||||||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||||||| |||||| ||||    
T  31975460 ggcaatggttaagaaagctaaaaataacatgtttgcattagttttaacaatattttgatttttaaaaagttaaatttaccactttttatcatttttcaat 31975559  T
Q  241 gctatctttctattt-tatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | ||| ||||||||| |||| | |||||||||  | ||||||||||| || ||||||||    
T  31975560 gttatatttctatttatatctctttatccaatacctcaagggcaatggttagcattctc 31975618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 52396414 - 52396547
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||||  |||| || |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||| ||||| |||||| ||    
T  52396414 agggcaatggttaaggaaattaaaaatagcatgtttgcatttgtttcaataatattttgacttttaaaaagttaaatttatcac-ttttatcatttttca 52396512  T
Q  239 atgctatctttcta-ttttatccccttatccaatg 272  Q
    || |||| |||||| ||||||||||||||||||||    
T  52396513 atactatatttctatttttatccccttatccaatg 52396547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 4656020 - 4656149
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 270  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||| || ||||||  ||||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaatttatcactttttactattttccaatgttatatttttatttttatttccttatccaa 4656119  T
Q  271 tgtcacaagggcaatgattggcattctcta 300  Q
    |||  | | ||||||||||  |||||||||    
T  4656120 tgttccgaaggcaatgattaacattctcta 4656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 40845253 - 40845379
Alignment:
Q  170 tgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatcc 268  Q
    ||||||| || |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| |||| |||| |||||| |||||||||||||| |    
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccccttattc 40845352  T
Q  269 aatgtcacaagggcaatgattggcatt 295  Q
    |||||| ||||||||||| || |||||    
T  40845353 aatgtctcaagggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 28851024 - 28850885
Alignment:
Q  159 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 257  Q
    |||||||| ||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||    
T  28851024 caaaagtagcatatttgcattggtttcaacaat-ttttgacttttaaaaagttaaatttatcacttttcaccattttccaatgttatatttctattttta 28850926  T
Q  258 tccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | | |||||| |||| | ||||||||||| || ||||||||    
T  28850925 ttctcttatctaatgccccaagggcaatggttagcattctc 28850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 32213988 - 32213876
Alignment:
Q  175 gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgt 273  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | | |||||| ||||||||||||||| |||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatgt 32213889  T
Q  274 cacaagggcaatg 286  Q
    | |||| ||||||    
T  32213888 cccaagagcaatg 32213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 45721728 - 45721857
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||    |||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  45721728 ggcaatggttaaggaaatcaaaagtagcatgtttgcattgattt---taacattttgatttttaaaaagttaaatttatcagtttttaccattttccaat 45721824  T
Q  241 gctatctttcta-ttttatccccttatccaatg 272  Q
    | ||| ||| || ||||||| ||||||||||||    
T  45721825 gttatatttttatttttatcaccttatccaatg 45721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 29966800 - 29966928
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttt-taaaaagttaaatttatcactttttaccattttccaatgcta 244  Q
    |||||||||||  |||||||| |||||||||||| |||||||||| ||||| |||||  ||||| |||||||||||| ||||| ||||||| ||||||||    
T  29966800 tggttaaggaagtcaaaagtagcatgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgcta 29966899  T
Q  245 tctttcta-ttttatccccttatccaatg 272  Q
    | ||| || ||||||||||||||||||||    
T  29966900 tatttatatttttatccccttatccaatg 29966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 50295549 - 50295434
Alignment:
Q  159 caaaagtaacatgttt-gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 256  Q
    |||||||| ||||||| |||||  ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| |||| |||||| ||||    
T  50295549 caaaagtagcatgttttgcattgatttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatactatatttctattttt 50295450  T
Q  257 atccccttatccaatg 272  Q
    | ||||||||||||||    
T  50295449 acccccttatccaatg 50295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 8244068 - 8244207
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||| |||||      ||| ||||||||||||||||||    ||| |||||||||    
T  8244068 agggcaatggttaaggaagccaaaaataacatgtttccattggtttcaaaaacat-----gtttgaaaaagttaaatttatca----ttatcattttcca 8244158  T
Q  239 atgctatctttctat-tttatccccttatccaatgtcacaagggcaatg 286  Q
    ||| ||| ||||||| ||||||||||||||||||| | |||| ||||||    
T  8244159 atgttatatttctatatttatccccttatccaatgccccaagagcaatg 8244207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 298
Target Start/End: Complemental strand, 26469696 - 26469557
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    |||||||  |||||| |||| ||||||| || ||||| |||||||||||||||||||||||| |||| |  ||||| ||||||||| ||| || ||||||    
T  26469696 aaaagtagtatgttttcattggtttcaataatattttgacttttaaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttat 26469597  T
Q  259 ccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| ||||||||| |  |||||||| ||||| ||||||||    
T  26469596 ccctttatccaatattccaagggcagtgattagcattctc 26469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| | || |||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 17402928 - 17403015
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||||| ||||||||||||  |  ||| |||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17402928 gttaagaaaaccaaaagtagtagttttacattagattcaacaatattttgacttttaaaaagttaaattcatcactttttaccatttt 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 48938611 - 48938723
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||||||||||||  || ||| |||||  ||||||||  |||| |||||||||||| ||||||| |||||||| ||||||||| ||| |    
T  48938611 caatggttaaggaaaccaaaagtagtatatttacattaaattcaacaatgttttgacttttaaaaag-taaatttttcacttttcaccattttctaatac 48938709  T
Q  243 tatctttctatttt 256  Q
     || ||||||||||    
T  48938710 aatatttctatttt 48938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 51424137 - 51424245
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||| |||||||||||||| |||||| |||| | ||||||||  ||||||| |||||||||||||||| |||||||||  | ||||| |||| | || |    
T  51424137 gttaaagaaaccaaaagtaatatgtttacattggattcaacaatgttttaacctttaaaaagttaaattcatcacttttagcaatttttcaatacaatat 51424236  T
Q  248 ttctatttt 256  Q
    |||||||||    
T  51424237 ttctatttt 51424245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 14331802 - 14331925
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||||||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| |||||||||||||||||||  ||| |||| |||||    
T  14331802 gccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcatttttcaccat 14331901  T
Q  233 tttccaatgctatctttctatttt 256  Q
    || ||||| | || ||||||||||    
T  14331902 ttcccaatacaatgtttctatttt 14331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 44359813 - 44359690
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||||||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| |||||||||||||||||||  |||||||| |||||    
T  44359813 gccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcacttttcaccat 44359714  T
Q  233 tttccaatgctatctttctatttt 256  Q
    || || || | || ||||||||||    
T  44359713 ttcccgatacaatgtttctatttt 44359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 40920165 - 40920294
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttat--cactttttaccattttccaatgctat 245  Q
    |||||||||||||||||||     |||||||| | |||||||| ||||||||||||||||||||||||| ||  ||||||| |||| ||  |||||| ||    
T  40920165 gttaaggaaaccaaaagtagtggatttgcattggattcaacaatattttaacttttaaaaagttaaattaatcacacttttcaccacttctcaatgcaat 40920264  T
Q  246 ctttcta-ttttatccccttatccaatgtc 274  Q
     |||||| |||||||| |||| ||||||||    
T  40920265 atttctatttttatcctcttaaccaatgtc 40920294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 44286864 - 44286930
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    |||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||||| ||||    
T  44286864 aaaagtaacatgtttgcattggttttaataatattttaatttttaaaaagttaaatttatcattttt 44286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 41492924 - 41493013
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatg 272  Q
    |||| ||| |||||||||||||||| || ||||| ||||||||| |||| || ||||||| || |||||||||||||| |||| ||||||    
T  41492924 ttcatcaatattttaacttttaaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctattttatcctcttaaccaatg 41493013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 43168106 - 43168229
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||| |||||||||||||| ||||||||  || ||| ||||   ||||||||  |||| ||||||||||||||||| |  |||||||| |||||    
T  43168106 gccctcagggaaatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaactcttcacttttcaccat 43168205  T
Q  233 tttccaatgctatctttctatttt 256  Q
    || ||||| | || ||||||||||    
T  43168206 ttcccaatacaatgtttctatttt 43168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 30222613 - 30222678
Alignment:
Q  161 aaagtaacatgtttgcattagtttcaacaacattttaac-ttttaaaaagttaaatttatcacttt 225  Q
    |||||| ||| |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcacttt 30222678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 27210705 - 27210792
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacatttt-aacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||| ||| ||||||||| |  |||||||||  ||||||||| |||| |||||||||||||||||||| |||| |||| ||||||||    
T  27210705 ttaagtaaatcaaaagtaataaatttgcattaaattcaacaacttttttaacttttaaaaagttaaattgatcatttttcaccatttt 27210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 5945450 - 5945508
Alignment:
Q  198 acttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||  || ||||||||||    
T  5945450 acttttaaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttt 5945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 16691309 - 16691382
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||  |||| |||||||||||||||||||  ||| |||||||||||| ||||| | || ||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattcttcattttttaccatttcccaatacaatgtttctatttt 16691382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 8892901 - 8892789
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||||||||| |||||||  || |||  |||   || |||||  |||| |||||||||||||||||||  | |||||| ||||||||||||| |     
T  8892901 aatggttaaggaaactaaaagtagtatatttatattgaatttaacaatgttttgacttttaaaaagttaaattctttacttttcaccattttccaatacg 8892802  T
Q  244 atctttctatttt 256  Q
    || ||||||||||    
T  8892801 atgtttctatttt 8892789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 9055941 - 9055897
Alignment:
Q  145 atggttaaggaaaccaaaagtaacatgtttgcattagtttcaaca 189  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  9055941 atggttaaggaagccaaaagtagcatgtttgcattagtctcaaca 9055897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 44043500 - 44043538
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttacca 231  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  44043500 ttttgacttttaaaaagttaaatatatcactttttacca 44043538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 10161069 - 10161024
Alignment:
Q  171 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 216  Q
    ||||||||||  |||||| | |||||||||||||||||||||||||    
T  10161069 gtttgcattaaattcaacgatattttaacttttaaaaagttaaatt 10161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 46296276 - 46296231
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    |||||||| ||||| |||||||||||||||||||||| | ||||||    
T  46296276 ttcaacaatattttgacttttaaaaagttaaatttattatttttta 46296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 23328437 - 23328493
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||  ||||||||||||||||||  | | ||||||||||||| |||||||||    
T  23328437 ttcaacaattttttaacttttaaaaagtctagtctatcactttttactattttccaa 23328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 34644145 - 34644225
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    |||||||||||||||| ||  | |||| ||||   |||||||| ||||||||||||||| ||| ||||| |||| ||||||    
T  34644145 gttaaggaaaccaaaactactaagtttacattgaattcaacaatattttaacttttaaatagtcaaattcatcatttttta 34644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 29034658 - 29034818
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  29034658 agggcaatggttaagaaagccaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca 29034757  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || |||| ||| || |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  29034758 atactatatttatatttttatccccttatccaatgcctcaaggacaatggttagcattctc 29034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 24359839 - 24359713
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24359839 tggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatccctttttaccattttccattgctat 24359740  T
Q  246 ctttcta-ttttatccccttatccaat 271  Q
     |||||| |||||||||||||||||||    
T  24359739 atttctatttttatccccttatccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 5240466 - 5240308
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||| |    
T  5240466 caatggttaaggaagccaaaagtagcatgtttgcattggtttcaataacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatac 5240367  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 300  Q
    ||| |||||| ||||||||| |||||||||| | ||||| ||||| || ||||||||||    
T  5240366 tatatttctatttttatccctttatccaatgcctcaaggacaatggttagcattctcta 5240308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 42222190 - 42222328
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  42222190 tgagggcaatggttaaggaaactaaaagtaacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttc 42222289  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtc 274  Q
    |||| | || |||||| ||||||||||||||| ||||||    
T  42222290 caataccatatttctatttttatccccttatctaatgtc 42222328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 160 - 298
Target Start/End: Original strand, 40763241 - 40763380
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||| ||||||    
T  40763241 aaaagtagcatatttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccatttttcaatgttatatttctatttttat 40763340  T
Q  259 ccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||||| | ||||||||||| || ||||||||    
T  40763341 ccccttatccaatgccccaagggcaatggttagcattctc 40763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 46478694 - 46478537
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||| |    
T  46478694 gaggacaatggttaacgaagccaaaagtaacatatttgcattagtttcaacaatattttaacttttaaaaagttaaatttatca-ttttcactatttttc 46478596  T
Q  238 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||| ||| |||||| |||||||||||||||||||||   ||||||||||||| ||||||||    
T  46478595 aatgatatatttctatttttatccccttatccaatgt---aagggcaatgattagcattctc 46478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 271
Target Start/End: Original strand, 8380411 - 8380545
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||||||| |||||||||  |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  8380411 gagggcaatggttaaggaagccaaaagtagtatgttttcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcattttcc 8380510  T
Q  238 aatgctatctttcta-ttttatccccttatccaat 271  Q
    |||||||| ||| || |||||||||||||||||||    
T  8380511 aatgctatatttttatttttatccccttatccaat 8380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 298
Target Start/End: Complemental strand, 27053662 - 27053471
Alignment:
Q  109 gggtcttgctaaccattgtcctcagccctgagggcaa--tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 206  Q
    |||||||||||||||||| ||||||   | |||||||  |||||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||    
T  27053662 gggtcttgctaaccattgccctcag-ggtaagggcaatgtggttaaggaaaccaaaagtagaatgtttgcattggtttcaacaatattttgacttttaaa 27053564  T
Q  207 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||||||||||| |||||||||  ||||||| |||||| ||||||||| |||||||||| |  |||| |||||||| | ||||||    
T  27053563 aagttaaatttatcacttttcaccattttctgatgctatatttctatttttatccctttatccaatgccctaaggacaatgattagtattctc 27053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 7323095 - 7322931
Alignment:
Q  135 cctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    |||||| ||||||||||| |||  |||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  7323095 cctgagagcaatggttaaagaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattt 7322996  T
Q  235 tccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | ||| | ||| |||||| |||||||| |||||||||| || ||||||||||| || ||||||||    
T  7322995 ttcaaggttatatttctatttttatcctcttatccaatatctcaagggcaatggttagcattctc 7322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 1910215 - 1910374
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||| |||  |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  1910215 agggcaatggttaaagaagtcaaaagtagcatgtttacatttgtttcaacaacattttaacttttaaaaagttaaatttatcatttttcaccattttcta 1910314  T
Q  239 atgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| ||| ||||||||||   |||||||| |||| |  ||||||||||||| ||||||||    
T  1910315 atgttatatttctatttttatcccttatcaaatgccctaagggcaatgattagcattctc 1910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 298
Target Start/End: Original strand, 8292714 - 8292876
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    ||||||||||||||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||||  |||||||| |||||| |||||||||    
T  8292714 tgagggcaatggttaaggaagtcaaaagtagcatgtttggattgatttcaacaacattttgacttttaaaaaggcaaatttataacttttcaccattttc 8292813  T
Q  237 caatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||| |||||| ||||||||||||||||||||   ||| | |||||||| ||||||||    
T  8292814 caatgctatatttctatttttatccccttatccaatgctccaaagacaatgattagcattctc 8292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 43567623 - 43567496
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||| ||||||    
T  43567623 aaaagtatcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactataattctatttttat 43567524  T
Q  259 ccccttatccaatgtcacaagggcaatg 286  Q
    | |||||||||||| | |||||||||||    
T  43567523 ctccttatccaatgccccaagggcaatg 43567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 22521561 - 22521691
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||| ||  |||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| | | |||||||||||||    
T  22521561 caatggttaagaaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagttaaatttatcacttctcatcattttccaatgc 22521660  T
Q  243 tatctttcta-ttttatccccttatccaatg 272  Q
    ||| |||||| |||||||| |||||||||||    
T  22521661 tatatttctagttttatcctcttatccaatg 22521691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 29687457 - 29687547
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29687457 ttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 49069531 - 49069660
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| || || | ||||||||||||| ||||||||||||| |||||||| |||| ||    
T  49069531 aatggttaaggaaaccaaaagtaacatgtttgtattggtttcaacaatatattgatttttaaaaagttagatttatcacttttcaccatttttcaatact 49069630  T
Q  244 atctttcta-ttttatccccttatccaatg 272  Q
    || |||||| |||||||  |||||||||||    
T  49069631 atatttctatttttatcttcttatccaatg 49069660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 41188926 - 41188790
Alignment:
Q  137 tgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    ||||| |||||||||||||| ||||| |||  |||||||||||  |||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||    
T  41188926 tgaggacaatggttaaggaagccaaatgtagtatgtttgcattgatttcaacagcattttgacttttaaaaagttaaatttatcacctttcaccattttc 41188827  T
Q  237 caatgctatctttcta-ttttatccccttatccaatg 272  Q
    ||||||||| ||| || |||||||| |||||| ||||    
T  41188826 caatgctatatttatatttttatcctcttatcaaatg 41188790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  173 ttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 270  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||| || ||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 298
Target Start/End: Original strand, 36279094 - 36279250
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||| ||  |||||||| ||||||||||||| ||||||||   |||| | ||||||||||||||||||||||||||| ||||||||||||    
T  36279094 gggcaatggttaagaaaggcaaaagtagcatgtttgcattaatttcaaca---ttttgatttttaaaaagttaaatttatcacttttcaccattttccaa 36279190  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| ||| || ||||||||  |||||||||| | |||| | |||| || ||||||||    
T  36279191 tgctatatttatatttttatcctattatccaatgccccaagagtaatggttagcattctc 36279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 5348097 - 5347950
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    |||||||| ||||||||| |||||||||||| |||||||||   |||| ||||||||||||||||||||||||||||| | |||||||||||| ||| ||    
T  5348097 ttaaggaagccaaaagtagcatgtttgcattggtttcaaca---ttttgacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatt 5348001  T
Q  249 tctattt-tatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||| ||| ||||||| ||||| |  ||||| |||| || ||||||||    
T  5348000 tctatttatattcccttattcaatgccctaagggtaatggttagcattctc 5347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 30538596 - 30538458
Alignment:
Q  158 ccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 256  Q
    ||||||||||||||||||||||  ||||||||   |||| | |||||||||||||||||||||| |||| || |||||| ||| |||| |||||| ||||    
T  30538596 ccaaaagtaacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaatttatcatttttcactattttctaatactatatttctattttt 30538500  T
Q  257 atccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||||| |||||| ||||| |||||||| ||||||||    
T  30538499 atccccttatctaatgtcccaaggacaatgattagcattctc 30538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 22707049 - 22707179
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatc 267  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||| |  ||||||||||||||| ||||||||||   || ||||     
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcctttatt 22707148  T
Q  268 caatgtcacaagggcaatgattggcattctc 298  Q
    ||||| | ||| ||||||| || ||||||||    
T  22707149 caatgccccaaaggcaatggttagcattctc 22707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 48454907 - 48454812
Alignment:
Q  192 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||| | |||||| ||||    
T  48454907 attttgacttttaaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatg 48454812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 43958200 - 43958087
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    |||||||||||||||||||| ||||||  || ||||| ||||||||||| |||||||||||| |||| || |||||| ||| |||| |||||| ||||||    
T  43958200 aaaagtaacatgtttgcattggtttcagtaatattttgacttttaaaaaattaaatttatcatttttcacaattttctaatactatatttctatttttat 43958101  T
Q  259 ccccttatccaatg 272  Q
    | ||||||||||||    
T  43958100 cgccttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 40194818 - 40194884
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  40194818 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcactttt 40194884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 8258756 - 8258634
Alignment:
Q  159 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 257  Q
    ||||||||  ||||||||||| |||||||||| ||| | ||| ||||||||||||||||||||||||| |||||||| ||     || |||||| |||||    
T  8258756 caaaagtagtatgtttgcattggtttcaacaaaattatgactattaaaaagttaaatttatcacttttcaccatttttca-----atatttctattttta 8258662  T
Q  258 tccccttatccaatgtcacaagggcaat 285  Q
    ||||||||||| ||| | ||||||||||    
T  8258661 tccccttatccgatgccccaagggcaat 8258634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 46042749 - 46042835
Alignment:
Q  169 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||| |||||||||||||||  ||||| |||||||||||||||| |||||| |||||||| |||| |||| ||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaagttaaatttataacttttcaccatttt-caatactatatttctatttt 46042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 40067045 - 40066921
Alignment:
Q  147 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 246  Q
    ||||||||||  ||||||||  || |||| ||| |||| ||||||||||||  |||||||||||||||||||||| |||| |||||||| ||||  |||     
T  40067045 ggttaaggaaggcaaaagtagtat-tttgtattggttttaacaacattttat-ttttaaaaagttaaatttatcatttttcaccatttttcaatattata 40066948  T
Q  247 tttcta-ttttatccccttatccaatg 272  Q
    |||||| ||||||||||||||||||||    
T  40066947 tttctatttttatccccttatccaatg 40066921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 44297030 - 44296945
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 233  Q
    ||||||||||||||||||| || |||| |||| | |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  44297030 gttaaggaaaccaaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 44296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 31626147 - 31626083
Alignment:
Q  171 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| | ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcatcatttt 31626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 18529282 - 18529196
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    |||||| ||||||||| || |||||||||| ||| |||||||||||||| ||||  ||||| ||||||| ||||||||| |||||||    
T  18529282 gttaagcaaaccaaaattagcatgtttgcaatagattcaacaacattttgacttgaaaaaaattaaattcatcacttttcaccattt 18529196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 16082570 - 16082473
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||| | ||||||||| |||||||||  ||||||||||| | |||||||| |  ||||||||||||| |||||||| |||| |||| |||||||||    
T  16082570 agggcacttgttaaggaatccaaaagtagtatgtttgcattggattcaacaataacttaacttttaaaacgttaaattcatcaattttcaccattttc 16082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 32204197 - 32204270
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| | |||||| |||||| || ||||||||||    
T  32204197 ttcaaaaatattttaacttttaaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 35404399 - 35404310
Alignment:
Q  132 agccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca 221  Q
    |||||| |||||| | |||||||||| ||||||||  | |||| |||||| |||||| | ||||||||||||||||||||||||| ||||    
T  35404399 agccctaagggcagttgttaaggaaatcaaaagtagtaggtttacattagattcaacgatattttaacttttaaaaagttaaattcatca 35404310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 48879645 - 48879742
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||| ||| |||||||| ||| ||| |||||  |||||||| ||||||||||||||||| |||||||  |||||||| || |||| |||||    
T  48879645 caatggttaagaaaatcaaaagtagcatatttacattaaattcaacaatattttaacttttaaaaaattaaattcttcacttttcactatttcccaat 48879742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 29959035 - 29959095
Alignment:
Q  136 ctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacatttt 196  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  29959035 ctgaggacaatgattaaggaaaccaaaagtattatgtttgcattggtttcaacaacatttt 29959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 16957639 - 16957711
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaa 214  Q
    |||||||||||||||| |||||||||| || ||| |||||  |||||||| ||||| |||||||||||||||||    
T  16957639 ggcaatggttaaggaa-ccaaaagtaatatatttacattaaattcaacaatattttgacttttaaaaagttaaa 16957711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 16931867 - 16931962
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||| ||||||||| ||  || ||| |||||  |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16931867 aatggttaagaaaaccaaaaatagtatatttacattaaattcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 16937250 - 16937345
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||| ||||||||| ||  || ||| |||||  |||||||| ||||| |||||||||||||||||||  |||| |||||| ||||||||||    
T  16937250 aatggttaagaaaaccaaaaatagtatatttacattaaattcaacaatattttgacttttaaaaagttaaattattcac-ttttactattttccaat 16937345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 30388793 - 30388697
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||| |||  ||||||||  ||||||  |||  |||||| || ||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  30388793 aatggttaaagaagtcaaaagtagtatgtttatattgatttcaataatattttgacttttaaaaagttaaatttatcatttttcaccatttttcaat 30388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 40774336 - 40774264
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||| | |||||| |||||| || |||||||||    
T  40774336 ttcatcaatattttaacttttaaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctattt 40774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 4686127 - 4686080
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  4686127 ttttaacttttaaaaagttaaattaatcacttttcaccatttttcaat 4686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 35239915 - 35239829
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||| ||| |||||||| |||||| ||||   ||||| | |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  35239915 gttaaggtaacaaaaagtaatatgttt-cattgaattcaatagcattttaacttttaaaaagttaaattcatcacgttttatcatttt 35239829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 6548533 - 6548603
Alignment:
Q  171 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    ||||||||| | | |||||| ||||||||||||||||||||||||| |||| |||| ||| ||| ||||||    
T  6548533 gtttgcattggatccaacaatattttaacttttaaaaagttaaattcatcatttttcaccgtttcccaatg 6548603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 10575896 - 10575802
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    ||||||||||||| |||| ||||||||  || ||| ||||   |||||||| ||||  | |||||||||||||||||| |||||||| |||||||    
T  10575896 gggcaatggttaaagaaatcaaaagtagtatattttcattgaattcaacaatatttggagttttaaaaagttaaatttttcacttttcaccattt 10575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 31360363 - 31360313
Alignment:
Q  206 aaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||||||||||||||||||||| ||||| | || ||||||||||    
T  31360363 aaagttaaatttatcactttttaccatttcccaatacaatatttctatttt 31360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 44260631 - 44260558
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca 221  Q
    |||||||||||||||| ||  ||||||||||||  ||||| ||||||||  |||||||||| ||||||| ||||    
T  44260631 gttaaggaaaccaaaattagtatgtttgcattaaattcaataacattttggcttttaaaaaattaaattcatca 44260558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 279
Target Start/End: Complemental strand, 1907717 - 1907586
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||||||||||||| |||  |||||||||||   |||||||| ||||| | | ||||||| ||||||| || | ||||||||||||| |||| | || |    
T  1907717 gttaaggaaaccaaatgtat-atgtttgcattgcattcaacaatattttgattattaaaaaattaaattcattattttttaccatttttcaatacaatat 1907619  T
Q  248 ttct-attttatccccttatccaatgtcacaag 279  Q
    ||||  ||||||||  |||||||||||| ||||    
T  1907618 ttctctttttatccttttatccaatgtctcaag 1907586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 3720198 - 3720135
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||||||||||||||||||||| |||  |||||||  |||||| || || |||||||    
T  3720198 ttttaacttttaaaaagttaaatttatcattttacaccatttgtcaatgcaatattactatttt 3720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 5543061 - 5543112
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    ||||||||  |||||||||||||||||| |||| |||||||||| |||||||    
T  5543061 ttcaacaattttttaacttttaaaaagtcaaatatatcacttttcaccattt 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 35003630 - 35003673
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||    
T  35003630 ttttaatttttaaaaagttaaattaatcacttttcaccattttc 35003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 43189731 - 43189688
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||    
T  43189731 ttcaacaatattttaacttttaaaaagtcaaattcatcactttt 43189688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 44391019 - 44391082
Alignment:
Q  192 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  44391019 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 44391082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 18800242 - 18800197
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcacttttta 228  Q
    |||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  18800242 ttcaacaatattgtaatttttaaaaagttaaatttatcactcttta 18800197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 46423388 - 46423425
Alignment:
Q  198 acttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||||||| || ||||||||||||||||||||||||||    
T  46423388 acttttaagaaattaaatttatcactttttaccatttt 46423425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 5977809 - 5977757
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||||  |||||||||||||||||||||||  ||||||||| || |||||    
T  5977809 ttcaacaattttttaacttttaaaaagttaaatccatcacttttcactatttt 5977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 35653399 - 35653236
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||| |||||    
T  35653399 gccctcagggcaatggttaaggaagccaaaagtaccatgtttgcattggtttcaacaacattttgattttcaaaaagttaaatttatcacttttcaccat 35653300  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 295  Q
    ||||||||||||| |||||| ||||||||||||||||||||   ||||||||||| || |||||    
T  35653299 tttccaatgctatatttctatttttatccccttatccaatgcaccaagggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 34546743 - 34546882
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34546743 gccctaagggcaatggttaaggaagccaaaagtatcatttttgcattagtttcaacaacattttaacttttaaaaaattaaatttatcacttttcaccat 34546842  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaat 271  Q
    ||| ||||| ||| |||||| |||||||||||||||||||    
T  34546843 ttttcaatgttatatttctatttttatccccttatccaat 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 300
Target Start/End: Complemental strand, 4422105 - 4421940
Alignment:
Q  136 ctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||||||||||||||||||||  |||||||||||||||||||||   |||||||||||||| | || |||||||||||||||||||||||| ||||||||    
T  4422105 ctgagggcaatggttaaggaagtcaaaagtaacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaatttatcacttttcaccatttt 4422006  T
Q  236 ccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 300  Q
    |||||||||| |||||| |||||||| ||||||||||| |  |||||||||| ||  |||||||||    
T  4422005 ccaatgctatatttctatttttatcctcttatccaatgccctaagggcaatggttaacattctcta 4421940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 16315676 - 16315512
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| |||||    
T  16315676 gccctcagggcaatggttaaggaagccaaaagtagcgtgtttgcattggtttcaacaacattttgactattaaaaagtt--atttatcacttttcaccat 16315579  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||||||||||| |||||| |||||||||||||||| ||| |  ||||||| || || ||||||||    
T  16315578 tttccaatgctatatttctatttttatccccttatccgatgcccaaagggcagtggttagcattctc 16315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 35945222 - 35945377
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||||||||| || |||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |    
T  35945222 aatggttaagaaagccaaaaatatcatatttgcattagtttcaacaacattttaacatttaaaaagttaaatttatcacttttcactattttccaatgtt 35945321  T
Q  244 atctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || |||||| |||||| ||||||||||||  | |||| ||||||||| ||||||||    
T  35945322 atatttctatttttattcccttatccaataccccaagagcaatgattagcattctc 35945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 4962655 - 4962507
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    |||||||||||||| | ||  |||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  4962655 gagggcaatggttaggaaagacaaaagtagcatgtttgtattagtttcaacaacattttgactttaaaaaagttaaatttatcacttttcatcattttcc 4962556  T
Q  238 aatgctatctttctattttatccccttatccaatgtcacaagggcaatg 286  Q
    |||| ||| ||||||||||    |||||||||||||| |||||||||||    
T  4962555 aatgttatatttctatttttattccttatccaatgtcccaagggcaatg 4962507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 43414182 - 43414042
Alignment:
Q  159 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttta 257  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||| |||| |||||||||||||||||| |||||| |||||    
T  43414182 caaaagtaacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattgatcatttttcaccattttccaatgctatatttctattttta 43414083  T
Q  258 tccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||||  |||| ||||||||||  || ||||||||    
T  43414082 tccccttatcccttgtcccaagggcaattcttagcattctc 43414042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 284
Target Start/End: Complemental strand, 25017426 - 25017283
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    |||||||||||||||  |||||||| |||||||| ||| |||||||| | ||||| ||||||||||||||||||||||||||||| || ||||||||||     
T  25017426 gcaatggttaaggaagtcaaaagtagcatgtttgtattggtttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaata 25017327  T
Q  242 ctatctttcta-ttttatccccttatccaatgtcacaagggcaa 284  Q
    |||| |||||| |||||||||||||||||||| | |||||||||    
T  25017326 ctatatttctatttttatccccttatccaatgcctcaagggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 147 - 272
Target Start/End: Original strand, 5151468 - 5151594
Alignment:
Q  147 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 246  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||| |||     
T  5151468 ggttaaggaaggcaaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttata 5151567  T
Q  247 tttcta-ttttatccccttatccaatg 272  Q
    |||||| ||||||||||||||| ||||    
T  5151568 tttctatttttatccccttatcaaatg 5151594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 147 - 299
Target Start/End: Complemental strand, 28143253 - 28143100
Alignment:
Q  147 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 246  Q
    |||||| ||| ||||||||| |||||||| |||||||||||||||||||| | |||||||||||||||||||| | |||| ||||||| |||||| |||     
T  28143253 ggttaaagaagccaaaagtagcatgtttgtattagtttcaacaacattttgatttttaaaaagttaaatttattatttttcaccatttcccaatgttata 28143154  T
Q  247 tttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 299  Q
    |||||| ||||||| |||||| ||||||| ||||||||||| || |||||||||    
T  28143153 tttctatttttatctccttattcaatgtcccaagggcaatggttagcattctct 28143100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 13951373 - 13951258
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||| |||||||||||  |||||||||||||||| |||||||| |||    
T  13951373 gggcaatggttaaggaagccaaaagtagcatgcttgcattggtttcaacaacattttgacttttaaaaaaataaatttatcacttttcaccatttttcaa 13951274  T
Q  240 tgctatctttctattt 255  Q
    |||||| |||||||||    
T  13951273 tgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 299
Target Start/End: Original strand, 39567868 - 39568035
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||||||||| ||||||||  |||||||| |||||||||||| ||||||||||  |||| | |||||||||||||||||||||| |||| | |||    
T  39567868 gccctcagggcaatgattaaggaagtcaaaagtagcatgtttgcattggtttcaacaatgttttgatttttaaaaagttaaatttatcatttttcatcat 39567967  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 299  Q
    ||||||||||||| ||| || ||||||||| |||||||||| | ||||||||||| ||  ||||||||    
T  39567968 tttccaatgctatatttatatttttatcccattatccaatgccccaagggcaatggttatcattctct 39568035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 12914140 - 12914261
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||| |||||||||| ||||| | ||||||||| ||||||||||||||||| |||||    
T  12914140 gccctgagggtaatggttaaggaagccaaaagtagtatgtttgcattggtttcaacaatattttgatttttaaaaaattaaatttatcacttttcaccat 12914239  T
Q  233 tttccaatgctatctttctatt 254  Q
    ||| ||||||||| ||||||||    
T  12914240 ttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 141 - 306
Target Start/End: Original strand, 8410115 - 8410281
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||| |||||||| |||||| || |||||||| ||| |||| || |||||||| |||||||||||||||||||||||| |||||||||||||| |||    
T  8410115 ggcaatgattaaggaagccaaaactagcatgtttgtattggttttaataacattttgacttttaaaaagttaaatttatcattttttaccattttctaat 8410214  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctctatctttt 306  Q
     |||| ||| || ||||||||||||||| |||  | ||| ||||||| || ||||||||||| ||||    
T  8410215 actatatttttatttttatccccttatctaataccccaaaggcaatggttagcattctctatttttt 8410281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 3639207 - 3639072
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    |||||||||||||  ||||||||| ||||||||||| |||||||||| |||| | |||||||||| |||||||||||||| || |||||||||||||| |    
T  3639207 aatggttaaggaagtcaaaagtaatatgtttgcattggtttcaacaatatttga-cttttaaaaaattaaatttatcactcttcaccattttccaatgtt 3639109  T
Q  244 atctttcta-ttttatccccttatccaatgtcacaag 279  Q
    || |||||| |||||||||||||| ||||||| ||||    
T  3639108 atatttctatttttatccccttattcaatgtctcaag 3639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 25568428 - 25568304
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||| | |||||||||||||||| |||||||||| | |||||| ||||    
T  25568428 ggcaatggttaaggaaactaaaattaacatgtttgcattggtttcaataacattttgatttttaaaaagttaaatgtatcacttttcatcatttttcaat 25568329  T
Q  241 gctatctttcta-ttttatcccctt 264  Q
    ||||| ||| || ||||||||||||    
T  25568328 gctatatttatatttttatcccctt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 37243852 - 37243977
Alignment:
Q  173 ttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatg 272  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||   || ||||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcctttatccaatg 37243951  T
Q  273 tcacaagggcaatgattggcattctc 298  Q
     | |||||||||||||| ||||||||    
T  37243952 cctcaagggcaatgattagcattctc 37243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 27823233 - 27823364
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||| ||||||||  ||||| || |||||||| |||  |||||||   ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27823233 agggcaatgattaaggaagtcaaaattagcatgtttgtattgatttcaac---attttaatttttaaaaagttaaatttatcacttttcaccattttcca 27823329  T
Q  239 atgctatctttcta-ttttatccccttatccaatg 272  Q
    || |||| |||||| ||||||||||||||||||||    
T  27823330 atactatatttctatttttatccccttatccaatg 27823364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 39692984 - 39693087
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    |||||||||||||||  ||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  39692984 gcaatggttaaggaagtcaaaagtaacatgtttgtattgatttcaacaatattttaacttttaaaaagataaatttatcattttttaccacttttcaatg 39693083  T
Q  242 ctat 245  Q
    ||||    
T  39693084 ctat 39693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 338881 - 338754
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    ||||||| |||||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||||| |||||| ||||   || ||| || ||||||    
T  338881 aaaagtagcatgtttgcatttgtttcaacaatattttgatttttaaaaagttaaatttatcactttttatcatttttcaatatcatatttttatttttat 338782  T
Q  259 ccccttatccaatgtcacaagggcaatg 286  Q
    ||| |||||||||| | |||||||||||    
T  338781 ccctttatccaatgccccaagggcaatg 338754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 1759821 - 1759922
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaa 270  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |||| |||| |||||| |||||||| |||||||||    
T  1759821 tttgcattggttttaacaacattttgacttttaaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatccaa 1759920  T
Q  271 tg 272  Q
    ||    
T  1759921 tg 1759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 12068307 - 12068195
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||| ||  ||||| || |||||||| ||| || |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  12068307 caatggttaagaaagtcaaaa-tagcatgtttgtattggtgtcaataacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatac 12068209  T
Q  243 tatctttctatttt 256  Q
    ||| ||||||||||    
T  12068208 tatatttctatttt 12068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 1479232 - 1479140
Alignment:
Q  181 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatg 272  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |  ||||| ||||||||| |||||| |||||||||||||| |||||    
T  1479232 gtttcaataacattttgacttttaaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatg 1479140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 256
Target Start/End: Original strand, 39167538 - 39167683
Alignment:
Q  111 gtcttgctaaccattgtcctca-gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 209  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||| ||||||||||||| || ||| ||||   || |||||  |||| | ||||||||||    
T  39167538 gtcttgctaaccattgccctgatgcccttagggcaatggttaagaaaaccaaaagtaatatatttacattgaatttaacaatgttttgatttttaaaaag 39167637  T
Q  210 ttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| | |||||| ||||||||||||| | || ||||||||||    
T  39167638 ttaaattt-ttacttttcaccattttccaatacaatgtttctatttt 39167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 15915871 - 15915960
Alignment:
Q  207 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 295  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||| | |||| |||||| || |||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 4838259 - 4838322
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 209  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  4838259 tggttaaggaagccaaaaataacatgtttgcattagtttcaacaatattttgacttttaaaaag 4838322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 20184677 - 20184570
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    |||||||||| ||||||||| ||| ||| ||||| ||||||||  |||||||||||||||||| ||||| ||||||||| ||| |||  |||||| || |    
T  20184677 gttaaggaaatcaaaagtaatatgattgtattagattcaacaatgttttaacttttaaaaagtgaaattcatcacttttcaccgtttctcaatgcaatat 20184578  T
Q  248 ttctattt 255  Q
    ||||||||    
T  20184577 ttctattt 20184570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 40099352 - 40099450
Alignment:
Q  188 caacattttaacttttaaaaagttaaatttatcactttttacca-ttttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatg 286  Q
    |||||||| || |||||||| |||||||||||||||||| |||| |||| ||||||||| ||| |||||| ||||||||||||||| ||||||| |||||    
T  40099352 caacatttcaatttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt-tccccttatccaatgccacaaggacaatg 40099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 39335454 - 39335540
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||| |||||||||| ||  ||||||| ||| | |||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  39335454 ttaaagaaaccaaaattattatgtttgtattggattcaacaacattttgacttttaaaaagttaaattcatcactttttactatttt 39335540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 10017727 - 10017599
Alignment:
Q  169 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 267  Q
    ||||||||||| |||| ||||||||||||||||||||||||||  |||||||| |||| |||| |||||| | |||| |||||| |||||||| ||||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt--atttatcaattttcacca-tttccagtactatatttctatttttatcctcttatc 10017631  T
Q  268 caatgtcacaagggcaatgattggcattctct 299  Q
     |||||| | ||| ||||| ||  ||||||||    
T  10017630 aaatgtctctaggacaatggttaacattctct 10017599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 10406772 - 10406873
Alignment:
Q  152 aggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct 251  Q
    ||||||||||||||||||| |||||||| | |||||||| ||||| |  |||||||| |||||||||||||||||  ||||||| |||| | || |||||    
T  10406772 aggaaaccaaaagtaacatttttgcattggattcaacaatattttga-atttaaaaaattaaatttatcacttttctccatttttcaatacaatatttct 10406870  T
Q  252 att 254  Q
    |||    
T  10406871 att 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 678430 - 678522
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||| || || |||| || | | ||||||||  ||||||||||||||| |||||||| || |||||| |||||||||||||    
T  678430 gttaaggaaaccaaaattagcaggtttacaatggattcaacaattttttaacttttaaaaggttaaattcattacttttcaccattttccaat 678522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 19894798 - 19894906
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    |||||||||| ||||||||  | ||||| ||| | || ||||| ||||||||||||||||||||||||| ||||  ||| ||||||||  ||||| || |    
T  19894798 gttaaggaaatcaaaagtataaggtttgaattggatttaacaatattttaacttttaaaaagttaaattcatcatatttaaccattttttaatgcaatat 19894897  T
Q  248 ttctatttt 256  Q
    |||||||||    
T  19894898 ttctatttt 19894906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 38610386 - 38610313
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||  |||| |||||||||||||||||||  |||||||||| |||||| |||||| || ||||||||||    
T  38610386 ttcaacaatgttttgacttttaaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttt 38610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 15915014 - 15915083
Alignment:
Q  144 aatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaat 215  Q
    |||||||||||||||||||||||  |||||||  ||  |||||| || ||||||||||||||||||||||||    
T  15915014 aatggttaaggaaaccaaaagtagtatgtttg--ttgatttcaaaaatattttaacttttaaaaagttaaat 15915083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 39042170 - 39042096
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 216  Q
    ||||||||||| ||| |||||| || ||||||| ||||    ||||||||||||||||||||||||| |||||||    
T  39042170 gcaatggttaaagaagccaaaaatagcatgtttacattgacatcaacaacattttaacttttaaaaaattaaatt 39042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| | |||||||| |||||||||||||||||||| |||||||| |||||  ||| |||||| || | || ||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 12349628 - 12349585
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  12349628 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 12349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 24288502 - 24288553
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24288502 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 24373719 - 24373668
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    ||||||||  || |||||||||||||||||||| |||||||||| |||||||    
T  24373719 ttcaacaattttgtaacttttaaaaagttaaatctatcacttttcaccattt 24373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 28599738 - 28599691
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||||||||||||| |||||||||| |||| || ||||||||||    
T  28599738 ttttaacttttaaaaagtcaaatttatcatttttcactattttccaat 28599691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 3015144 - 3015106
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatca 221  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaattaatca 3015106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 3242047 - 3241974
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| |||||||||||||||||||| |||| |||| |||| || | || ||||||| || ||| ||||||    
T  3242047 ttcaacaatattttaacttttaaaaagtttaattcatcaattttcactacttcccaatgcaatatttttatttt 3241974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 16899680 - 16899635
Alignment:
Q  169 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaa 214  Q
    ||||||| ||| | |||||||||||||| |||||||||||||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaa 16899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 27535114 - 27535167
Alignment:
Q  188 caacattttaacttttaaaaagtt-aaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||||||| || ||||| ||||||||| |||||||| ||||    
T  27535114 caacattttaacttttaaaaacttaaaattcatcacttttcaccatttttcaat 27535167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5058772 - 5058812
Alignment:
Q  195 ttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||| ||||||||||||||||||||||||||| || |||||    
T  5058772 ttaatttttaaaaagttaaatttatcacttttcacaatttt 5058812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 17168691 - 17168763
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    |||| ||| ||||||| ||||||||||| ||||| |||| |||| ||| |||| |||||| || |||||||||    
T  17168691 ttcagcaatattttaaattttaaaaagtcaaattcatcatttttcaccgtttttcaatgcaatatttctattt 17168763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 28996229 - 28996285
Alignment:
Q  184 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||  ||||||||||||||||||| |||| |  |||||| |||||||||||||    
T  28996229 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 28996285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 139 - 274
Target Start/End: Original strand, 2966511 - 2966647
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||| | ||||||| ||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  2966511 agggcaatggttaaggaagctaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttcca 2966610  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtc 274  Q
    ||| ||| |||||| ||||||||||||||||||||||    
T  2966611 atgttatatttctatttttatccccttatccaatgtc 2966647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 6999173 - 6999333
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  6999173 agggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttcca 6999272  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || |||| |||||| ||||||| ||||||||| || | ||   ||||||||| ||||||||    
T  6999273 atactatatttctatttttatctccttatccattgccccagaagcaatgattagcattctc 6999333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 39085952 - 39085773
Alignment:
Q  110 ggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 209  Q
    ||||||||||||||||||||||||        |||||||||||||||  |||||| | ||||||||||||  ||||||||||||||| ||||||||||||    
T  39085952 ggtcttgctaaccattgtcctcaga-------gcaatggttaaggaagtcaaaagcagcatgtttgcattgatttcaacaacattttgacttttaaaaag 39085860  T
Q  210 ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcatt 295  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||| |||| |||||| || |||||    
T  39085859 ttaaatttatcactttttatcattttccaatgttatatttctatttttatccctttatccaatgtcccaagagcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 139 - 285
Target Start/End: Original strand, 16361537 - 16361684
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  16361537 agggcaatgattaaggaagccaaaagtaacatgtttgcattggtttcgacaacattttgacttttataaagttaaatttatcaatttttaccattttcca 16361636  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 285  Q
    ||| ||| |||||| |||||| |||||||||||||   ||||||||||    
T  16361637 atgttatatttctatttttattcccttatccaatgctccaagggcaat 16361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 39401671 - 39401513
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||    
T  39401671 gggcaatggttaaggaagccaaaagtagcatgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa-ttatcacttttcaccatttttcaa 39401573  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || ||| |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  39401572 tgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 39401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 765258 - 765128
Alignment:
Q  169 atgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatc 267  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| |||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatc 765159  T
Q  268 caatgtcacaagggcaatgattggcattctc 298  Q
    ||||| | ||||||||||| || ||||||||    
T  765158 caatgccccaagggcaatggttagcattctc 765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 862559 - 862707
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    |||||||||| |||||||| ||||||||| |||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  862559 gagggcaatgattaaggaagccaaaagtagcatgtttgcattggtttcaacaagattttgactcttaaaaagttaaatttatcacttttcaccattttcc 862658  T
Q  238 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 285  Q
    ||| |||| |||||| ||||||||| |||| ||||| |  |||||||||    
T  862659 aatactatatttctatttttatcccattattcaatgccctaagggcaat 862707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 27495090 - 27495254
Alignment:
Q  135 cctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattt 234  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||| |||||||||||||||| | |||||||| |||||||||||||||||| |||||||    
T  27495090 cctgagggcaatggttaaggaagtcaaaagtagtatgtttgcattggtttcaacaacattttgatttttaaaatgttaaatttatcacttttcaccattt 27495189  T
Q  235 tccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    || |||| ||| ||| || |||||||||||||| ||||| | |||| |||||| || ||||||||    
T  27495190 tctaatgttatatttttatttttatccccttattcaatgccccaagtgcaatggttagcattctc 27495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 273
Target Start/End: Complemental strand, 17118542 - 17118376
Alignment:
Q  108 tgggtcttgctaaccattgtcctca-gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 206  Q
    ||||||||||||||||||| ||||| ||| ||||| |||||||||||||| |||||| |||||| |||||||| |||||||||||| ||| | |||||||    
T  17118542 tgggtcttgctaaccattgccctcatgccttgaggacaatggttaaggaagccaaaaataacatatttgcattggtttcaacaaca-tttgagttttaaa 17118444  T
Q  207 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgt 273  Q
    ||||||||||||||| |||| | ||||||||| |  ||| |||||| ||||||||| |||||||||||    
T  17118443 aagttaaatttatcatttttcaacattttccagtattatatttctatttttatccctttatccaatgt 17118376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 17074626 - 17074466
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17074626 gagggcaatggttaaggaagccaaaaatagcatatttgcattagtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17074528  T
Q  238 aatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | || ||| |||||| ||||||||| ||||| |||| |  |||||||||| || ||||||||    
T  17074527 agtgttatatttctatttttatccctttatctaatgccctaagggcaatggttagcattctc 17074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 138 - 271
Target Start/End: Original strand, 41436448 - 41436582
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||| |||  |||||||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| | |||||| |    
T  41436448 gagggcaatggttaatgaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaagtttatcacttttcatcatttttc 41436547  T
Q  238 aatgctatctttcta-ttttatccccttatccaat 271  Q
    ||| |||| ||| || |||||||||||||| ||||    
T  41436548 aatactatatttttatttttatccccttattcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 17056196 - 17056036
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17056196 gagggcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17056098  T
Q  238 aatgctatctttc-tattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | || ||| |||| | ||||||||| |||||||||| |  |||||||||| || ||||||||    
T  17056097 agtgttatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctc 17056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 298
Target Start/End: Complemental strand, 17068643 - 17068483
Alignment:
Q  138 gagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcc 237  Q
    ||||||||||||||||||| |||||| || ||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||      
T  17068643 gagggcaatggttaaggaagccaaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-t 17068545  T
Q  238 aatgctatctttc-tattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    | || ||| |||| | ||||||||| |||||||||| |  |||||||||| || ||||||||    
T  17068544 agtgttatatttctttttttatccctttatccaatgccctaagggcaatggttagcattctc 17068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 23685788 - 23685689
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||| |||||||| ||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  23685788 ggcaatgtttaaggaagccaaaagtaacatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcacttttccccattttccaat 23685689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 285
Target Start/End: Original strand, 33726355 - 33726498
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||| ||||| || |||||||| |||  ||||||||| ||||||||||||| |||||||||||||| | |||| |||||||| |||| |    
T  33726355 caatggttaaggaaatcaaaaatagcatgtttgtattgatttcaacaatattttaacttttagaaagttaaatttattatttttcaccatttttcaatac 33726454  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaat 285  Q
    ||| ||| || |||||||||||||||||||| | ||||||||||    
T  33726455 tatatttttatttttatccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 17603811 - 17603933
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 266  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| |||||| ||||||| | ||||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttttatcatttttcaatgctatatttctatttttatcgcgttat 17603910  T
Q  267 ccaatgtcacaagggcaatgatt 289  Q
    |||||| | ||||||||||||||    
T  17603911 ccaatgccccaagggcaatgatt 17603933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 33864349 - 33864474
Alignment:
Q  162 aagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatcc 260  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||||||| |||||| ||||||||||||||| || ||| || ||||||||    
T  33864349 aagtaacatatttgcattggtttcaacaatattttgacttttaaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcc 33864448  T
Q  261 ccttatccaatgtcacaagggcaatg 286  Q
     ||||| ||||||| |||||||||||    
T  33864449 tcttattcaatgtctcaagggcaatg 33864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 17095204 - 17095108
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||||||||||||||  ||||| || ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17095204 agggcaatggttaaggaatgcaaaaatagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 17095108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 298
Target Start/End: Original strand, 1321132 - 1321299
Alignment:
Q  133 gccctgagggcaatgg-ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 231  Q
    ||||| |||||||||| |||||||| |||||  || ||||||| ||||  ||||||||||||||| | ||||||| |||||||||||| | |||||||||    
T  1321132 gccctcagggcaatgggttaaggaagccaaagttagcatgtttacattgatttcaacaacattttgatttttaaagagttaaatttattattttttacca 1321231  T
Q  232 ttttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||| ||| |||||| |||||||| |||||||||||   ||||| ||||| || ||||||||    
T  1321232 ttttccaatgttatatttctatttttatcctcttatccaatgctccaaggacaatggttagcattctc 1321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 9201638 - 9201484
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||||||| ||||| |||  ||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  9201638 gccctcagggcaatagttaaagaagtcaaaagtaacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaatttatcacttttcaccat 9201540  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatga 287  Q
    |||  |||  ||| || ||| ||||||| | |||||||||||| ||||| ||||||    
T  9201539 tttttaatattatattcctatttttatctcattatccaatgtctcaaggacaatga 9201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 11445454 - 11445379
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaattt 217  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  11445454 gcaatggttaaggaaaccaaaagtaacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 143 - 298
Target Start/End: Complemental strand, 44299815 - 44299659
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    |||||||||||||| |||||| ||  ||| || |||| |||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| | | ||    
T  44299815 caatggttaaggaagccaaaaatagtatgcttacattggtttcaacaatattttgacttttaaaatgttaaatttatcacttttcaccatttttcgaggc 44299716  T
Q  243 tatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||| |||||| |||||||| |||| |||||| | |||  ||||||||| ||||||||    
T  44299715 tatatttctatttttatcctcttacccaatgccccaaaagcaatgattagcattctc 44299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 35445423 - 35445294
Alignment:
Q  145 atggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaactttt-aaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||| ||  |||||||| |||||||| ||| |||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||| ||||| |    
T  35445423 atggttaagcaagtcaaaagtagcatgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgtt 35445324  T
Q  244 atctttcta-ttttatccccttatccaatg 272  Q
    || ||| || |||||||||||||| |||||    
T  35445323 atatttatatttttatccccttattcaatg 35445294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 464770 - 464884
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatca-ctttttaccattttccaatg 241  Q
    ||||| ||||||||   |||||||||||||||| |||  |||||| |||||||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  464770 caatgattaaggaagttaaaagtaacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaattatcatttttttaccatttttcaatg 464869  T
Q  242 ctatctttctatttt 256  Q
     ||| ||||||||||    
T  464870 ttatatttctatttt 464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 44173099 - 44173207
Alignment:
Q  147 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 246  Q
    |||||| ||| |||||| ||| ||||||| ||| |||||||||||||||||| ||||||||| |||||||||||| |||| | |||||| |||||||||     
T  44173099 ggttaaagaagccaaaa-taatatgtttgtattggtttcaacaacattttaatttttaaaaaattaaatttatcatttttcatcatttttcaatgctata 44173197  T
Q  247 tttctatttt 256  Q
    ||||||||||    
T  44173198 tttctatttt 44173207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 15004905 - 15004985
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    ||||||| |||  |||||||| |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15004905 tggttaaagaagtcaaaagtatcatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcactttt 15004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 2239562 - 2239689
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    |||||| | ||||||||||  || |||| ||| | |||||||| ||||||||||||||||||||||||| |||| ||||||||||||| || ||| || |    
T  2239562 gttaagaataccaaaagtagtatatttgtattggattcaacaatattttaacttttaaaaagttaaattcatcattttttaccatttttcattgcaatat 2239661  T
Q  248 ttctat-tttatccccttatccaatgtc 274  Q
    |||||| ||||||| |||| ||||||||    
T  2239662 ttctatctttatcctcttaaccaatgtc 2239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 13998013 - 13997880
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 266  Q
    |||||||| |||  ||||||||| ||||||| |||||||||||||||||||||| |||| || ||||| ||||||||| |||||| |||||| |||||||    
T  13998013 catgtttgtattgatttcaacaatattttaatttttaaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttattcccttat 13997914  T
Q  267 ccaatgtcacaagggcaatgattggcattctcta 300  Q
    | |||  | |||  |||||| || ||||||||||    
T  13997913 ctaattcctcaaaagcaatggttagcattctcta 13997880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 34334290 - 34334182
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||||||||| ||||||| |||||||| ||| | |||||||| ||||||| || ||||||||| ||||| ||| |||||||||||||| ||| | || |    
T  34334290 gttaaggaaactaaaagtagcatgtttgtattggattcaacaatattttaatttgtaaaaagtttaatttgtcattttttaccattttcaaatacaatat 34334191  T
Q  248 ttctatttt 256  Q
    |||||||||    
T  34334190 ttctatttt 34334182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 11659233 - 11659334
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||||||||||||| |  || ||| ||||   |||||||| ||||||| |||||||||||||||||  |||||||| || ||||| ||    
T  11659233 agggcaatggttaaggaaaccaaaagcagtatatttacattgaattcaacaatattttaatttttaaaaagttaaattcttcacttttcactatttttca 11659332  T
Q  239 at 240  Q
    ||    
T  11659333 at 11659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 34220740 - 34220639
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaaggg 281  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||| |||| || ||||||| |  |||||| |||||||| |||| ||||||||  |||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatgtcttaaggg 34220641  T
Q  282 ca 283  Q
    ||    
T  34220640 ca 34220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 747585 - 747528
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||  ||||||||||||||||||||||| |||||||||| || ||||||||||    
T  747585 ttcaacaattttttaacttttaaaaagttaaatctatcacttttcactattttccaat 747528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 33848957 - 33849034
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 216  Q
    ||||||||||||||||||||||||||||| || |||  ||||  ||||||||   ||| |||||||||||||||||||    
T  33848957 agggcaatggttaaggaaaccaaaagtaatatatttatattaaattcaacaatggtttgacttttaaaaagttaaatt 33849034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 41890255 - 41890182
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 206  Q
    ||||| |||||| | |||||||||||||||||||  | ||||||||| | |||||||| |||||||||||||||    
T  41890255 gccctaagggcatttgttaaggaaaccaaaagtagtaggtttgcattggattcaacaatattttaacttttaaa 41890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 2136401 - 2136524
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| |||||| | |||||||||||||||| ||  | ||||| |||   |||||||| ||||| |||||| |||||| |||||   ||||||| | |||    
T  2136401 gcccttagggcacttgttaaggaaaccaaaattagtaggtttgtattgtattcaacaatattttcacttttcaaaagtcaaattctccacttttcatcat 2136500  T
Q  233 tttccaatgctatctttctatttt 256  Q
    |||||||||| || ||||||||||    
T  2136501 tttccaatgcaatatttctatttt 2136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 29260257 - 29260167
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||||||||||||| | | | ||| |||||   ||||||||  ||||||||||| |||||| |||| |||||||||| |||||||||||    
T  29260257 gttaaggaaaccaaaaatgataagttcgcattgaattcaacaattttttaactttttaaaagtcaaatctatcacttttcaccattttcca 29260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 3454791 - 3454743
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  3454791 ttcaacaatatttta-cttttaaaaagttaaagttatcactttttaccat 3454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 10900344 - 10900271
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||| || ||||||||||||||||| | ||||| ||||||||||| |||||| |||||  || ||||||||||    
T  10900344 ttcaataatattttaacttttaaaaaataaaattcatcactttttatcatttttcaatgtgatatttctatttt 10900271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 43140419 - 43140314
Alignment:
Q  181 gtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaag 279  Q
    ||||||| || ||||| | |||||||||||||||||||||| ||||   |||||| ||||| ||| ||| || |||||||| |||||||||| || ||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaatatctcaag 43140320  T
Q  280 ggcaat 285  Q
    | ||||    
T  43140319 gacaat 43140314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 11445364 - 11445313
Alignment:
Q  204 aaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    |||||||||||||||||| |||| |||||||| ||||| ||| |||||||||    
T  11445364 aaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 34512671 - 34512714
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  34512671 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 34512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 8327004 - 8327038
Alignment:
Q  192 attttaacttttaaaaagttaaatttatcactttt 226  Q
    |||||||||||||||||||||||||| ||||||||    
T  8327004 attttaacttttaaaaagttaaatttttcactttt 8327038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 30831636 - 30831706
Alignment:
Q  186 aacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||||  |||||  ||||| || ||||||||||    
T  30831636 aacaatatttttacttttaaaaagttaaattcatcattttttataattttttaatgcaatatttctatttt 30831706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 2805373 - 2805441
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaactttt--aaaaagttaaatttatcactttt 226  Q
    |||||||  ||||||| ||||| |||||||| ||||| ||||||  ||||||||||||| |||||||||    
T  2805373 aaaagtagtatgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcactttt 2805441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 37230253 - 37230306
Alignment:
Q  201 tttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatt 254  Q
    ||||||||||||| |||||||||||| |||||||| |||| | || ||||||||    
T  37230253 tttaaaaagttaagtttatcacttttcaccatttttcaatacaatatttctatt 37230306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 298
Target Start/End: Complemental strand, 19389441 - 19389288
Alignment:
Q  146 tggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    |||||||||||| |||||||| ||||||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||    
T  19389441 tggttaaggaaatcaaaagtagcatgtttgcattgttttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactat 19389342  T
Q  246 ctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
     |||||| |||||||||||||||||||| | ||||||||||| || ||||||||    
T  19389341 atttctatttttatccccttatccaatgccccaagggcaatggttagcattctc 19389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 4989909 - 4990064
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||   |||| || ||||||||||||||||||||| |||| || ||||||||||    
T  4989909 ggcaatggttaaggaagtcaaaagtagcatgtttgcattggtttcaaca---ttttgacatttaaaaagttaaatttatcatttttcactattttccaat 4990005  T
Q  241 gctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||| |||||| ||||||||||||||||||||  |||||| |||||||| ||||||||    
T  4990006 gctatatttctatttttatccccttatccaatgctacaaggacaatgattagcattctc 4990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 10694781 - 10694911
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    ||||||||||||||| ||||||||| ||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||     
T  10694781 gcaatggttaaggaagccaaaagtatcatatttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttaaata 10694880  T
Q  242 ctatctttctatttt-atccccttatccaat 271  Q
    |||| ||| |||||| |||||||||||||||    
T  10694881 ctatatttttattttaatccccttatccaat 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 18068952 - 18069062
Alignment:
Q  158 ccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-tttt 256  Q
    |||||||||  |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  18068952 ccaaaagtataatgtttgcattagtttcaacaacattttgacctttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttt 18069051  T
Q  257 atccccttatc 267  Q
    |||||||||||    
T  18069052 atccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 8018733 - 8018866
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgttt-gcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||||||||||| |||||||||  |||||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  8018733 ggcaatggttaaggaagccaaaagtagtatgttttgcattagttttaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaa 8018832  T
Q  240 tgctatctttcta-ttttatccccttatccaatg 272  Q
    |  ||| |||||| ||||||||||||||||||||    
T  8018833 tattatatttctatttttatccccttatccaatg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 26672755 - 26672894
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||  ||| |||||||||||||||| ||||||||||| |||||||||||  |||||| |||    
T  26672755 gccctgagggcaatggttaaggaaatcaaaaatacgatgtttatattggtttcaacaacattttgacttttaaaaaattaaatttatccttttttatcat 26672854  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaat 271  Q
    ||||||||||||| |||||| ||||||||| |||||||||    
T  26672855 tttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 21016185 - 21016035
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctt 248  Q
    ||||||||  |||||||| |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||| ||| ||    
T  21016185 ttaaggaagtcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttaaccatttttcaatgttatatt 21016086  T
Q  249 tcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||| |||||||||||||||||| | | ||| ||||||| || ||||||||    
T  21016085 tctatttttatccccttatccaaagcctcaaaggcaatggttagcattctc 21016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 45337983 - 45338137
Alignment:
Q  147 ggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatc 246  Q
    ||||||||||||||||||||  ||||||||||| || |||| |||||||| | |||||||||||||||||||||| |||| |||||||| ||||| |||     
T  45337983 ggttaaggaaaccaaaagtagtatgtttgcattggtctcaataacattttgatttttaaaaagttaaatttatcatttttcaccatttttcaatgttata 45338082  T
Q  247 tttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctcta 300  Q
    |||||| |||||||||||||||||||| |  |||| ||||| || ||||||||||    
T  45338083 tttctatttttatccccttatccaatgcccaaaggacaatggttagcattctcta 45338137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 14855513 - 14855394
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| || |||||  ||| |||| |    
T  14855513 gttaaggaaaccaaaagtagcatgtttgcattagttttaacaacattttaacttttaaaatgttaaatttatctcttttcactattttttaatactatat 14855414  T
Q  248 ttcta-ttttatccccttat 266  Q
    ||||| ||||||||||||||    
T  14855413 ttctatttttatccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 26195490 - 26195383
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttat 258  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||| ||||||    
T  26195490 aaaagtagcatgtttgtattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttat 26195391  T
Q  259 ccccttat 266  Q
    ||||||||    
T  26195390 ccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 272
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 266  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||| ||||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttacccccttat 25249351  T
Q  267 ccaatg 272  Q
    ||||||    
T  25249350 ccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 6433509 - 6433632
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| || |||||||||||||||  ||||||||  || |||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  6433509 gccctcagagcaatggttaaggaagacaaaagtagtatctttgcattggttttaacaatattttaacttttaaaaagttaaatttataactttttaccat 6433608  T
Q  233 tttccaatgctatctttctatttt 256  Q
    ||| ||||||||| ||| ||||||    
T  6433609 ttttcaatgctatatttttatttt 6433632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 6939152 - 6939246
Alignment:
Q  162 aagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||| ||||| ||| ||||||||||    
T  6939152 aagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttt 6939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 21016234 - 21016362
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 266  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||  ||| |||||| ||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttcaccatttttcaatattatatttctatttttatccccttat 21016333  T
Q  267 ccaatgtcacaagggcaatgattggcatt 295  Q
    |||| | | ||| ||||||| || |||||    
T  21016334 ccaaagccccaaaggcaatggttagcatt 21016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 37433239 - 37433369
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||| ||||||||   |||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  37433239 ggcaatgattaaggaagttaaaagtagtatgtttgcattggtttcaacaacattttaac-tttaaaaagttaaatttatcacttttcatcatttttcaat 37433337  T
Q  241 gctatctttcta-ttttatccccttatccaat 271  Q
    | ||| | || | |||||||||||||||||||    
T  37433338 gttatatgtcgatttttatccccttatccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 33741637 - 33741525
Alignment:
Q  112 tcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagtt 211  Q
    |||||||||||||||| ||  ||||| || |||||| |||||  |  |||||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  33741637 tcttgctaaccattgttct--gccctcagtgcaatgattaagagagtcaaaagtaacatatttgcattggtttcaacaatattttaacttttaaaaagtt 33741540  T
Q  212 aaatttatcactttt 226  Q
    |||||||||| ||||    
T  33741539 aaatttatcattttt 33741525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 44874308 - 44874430
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||  |||||||| |||||||||||| |||||||||||        ||||||||| ||||||||||||||||| |||||||| |||||     
T  44874308 caatggttaaggaagacaaaagtagcatgtttgcattggtttcaacaac--------ttttaaaaatttaaatttatcacttttcaccatttttcaatgt 44874399  T
Q  243 tatctttcta-ttttatccccttatccaatg 272  Q
    ||| ||| || ||||||||||||||||||||    
T  44874400 tatatttatatttttatccccttatccaatg 44874430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 34714048 - 34713953
Alignment:
Q  150 taaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||| |||| ||||    
T  34714048 taaggaagtcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagtgaaatttatcactttgcaccatttttcaatactat 34713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 5129545 - 5129434
Alignment:
Q  188 caacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatg 286  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||| |||| | ||||||||||||||| ||||    ||||||||||    
T  5129545 caacattttgacttttaaaaaattaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgctctaagggcaatg 5129446  T
Q  287 attggcattctc 298  Q
     || ||||||||    
T  5129445 gttagcattctc 5129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 26892795 - 26892874
Alignment:
Q  177 attagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||| ||||||||||    
T  26892795 attagtttcaataatattttaacttttaaaaagttaaatttatcattttttacaatttttcaatattatatttctatttt 26892874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 3174436 - 3174563
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaac----attttaacttttaaaaagttaaatttatcactttttaccattttccaatgct 243  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||    ||||| ||||||||||||| |||||||| | |||| |||||||||||||       
T  3174436 gttaaggaagccaaaagtagcatgtttgtattggtttcaacaacatttattttgacttttaaaaagtcaaatttataatttttcaccattttccaatata 3174535  T
Q  244 atctttcta-ttttatccccttatccaa 270  Q
    || |||||| ||||||||||| ||||||    
T  3174536 atatttctatttttatcccctcatccaa 3174563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 7532767 - 7532890
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatct 247  Q
    |||||||||||||||||||  | ||||| ||| | |||||||| |||  ||||||||||||  |||||| ||||||||| ||||||||||||| | || |    
T  7532767 gttaaggaaaccaaaagtagtaggtttgaattggattcaacaatatt--aacttttaaaaacctaaattcatcacttttcaccattttccaatacaatat 7532864  T
Q  248 ttcta-ttttatccccttatccaatg 272  Q
    ||||| ||||||||||||| ||||||    
T  7532865 ttctatttttatccccttaaccaatg 7532890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 20212518 - 20212433
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatt 233  Q
    ||||||||||||||||||| || |||| |||| | |||||| | ||||||||||||||||| ||||||| ||||||||| ||||||    
T  20212518 gttaaggaaaccaaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 20212433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 30351583 - 30351666
Alignment:
Q  160 aaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcac-tttttaccattttccaatgc 242  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||||||||||| |  |||| ||||||||||||| ||||||    
T  30351583 aaaagtaatatgtttgcattggattcaacaatattttaacttttaaaaagttaaactcgtcacttttttaccatttttcaatgc 30351666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 39972290 - 39972189
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    |||||| | |||||||||||||||| ||  |||||||||||   || |||||  |||||||||||||||||| ||||| ||||||||| ||||||| |||    
T  39972290 agggcactagttaaggaaaccaaaaatagtatgtttgcattgaattgaacaattttttaacttttaaaaagtcaaattcatcacttttcaccatttccca 39972191  T
Q  239 at 240  Q
    ||    
T  39972190 at 39972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 4308789 - 4308876
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||||||||||||||| ||  | ||||| ||| | |||||||  ||||||||||||| ||||||||||| |||| |||||||||||||    
T  4308789 gttaaggaaaccaaaaatagtaggtttgtattggattcaacactattttaacttttataaagttaaattcatcattttttaccatttt 4308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 7444258 - 7444317
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaa 207  Q
    |||||||||||||||||||  | ||||||||||| |||||||| ||||||||||||||||    
T  7444258 gttaaggaaaccaaaagtagtaggtttgcattagattcaacaatattttaacttttaaaa 7444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 38869969 - 38870092
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| || |||||||| ||||||||||||||||  || ||| ||||   |||| ||| ||||| |||||||||| ||| ||||  |||||||| | |||    
T  38869969 gccctcagagcaatggtcaaggaaaccaaaagtagtatatttacattgaattcatcaatattttgacttttaaaatgttgaattcttcacttttcatcat 38870068  T
Q  233 tttccaatgctatctttctatttt 256  Q
    |||||||||| || ||||||||||    
T  38870069 tttccaatgcaatgtttctatttt 38870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 6396378 - 6396315
Alignment:
Q  172 tttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||||| || ||| || ||||||||    
T  6396378 tttgtattagattcaacaacattttaacgtttaaaatgttaaattcattactcttcaccatttt 6396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 20169309 - 20169372
Alignment:
Q  192 attttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctattt 255  Q
    ||||||||||||||||||| ||||| || | ||||||| |||||| ||||| || |||||||||    
T  20169309 attttaacttttaaaaagtcaaattcataattttttacaattttctaatgcaatatttctattt 20169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 35974005 - 35973927
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    ||||| |||||||||| ||| | ||||| || |  |||||||| |||||| |||||||||| |||||||||||| ||||    
T  35974005 gttaatgaaaccaaaaataataagtttgtatgaaattcaacaatattttatcttttaaaaaattaaatttatcattttt 35973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 17320045 - 17320000
Alignment:
Q  186 aacaacattttaacttttaaaaagttaaatttatcactttttacca 231  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  17320045 aacaatattttaacttttaaaaagttaaattcatctcttttcacca 17320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 39491891 - 39491858
Alignment:
Q  193 ttttaacttttaaaaagttaaatttatcactttt 226  Q
    |||||||||||||||||||||||| |||||||||    
T  39491891 ttttaacttttaaaaagttaaattcatcactttt 39491858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 5300203 - 5300263
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaa 208  Q
    |||||||||||||||||||  | |||||||||   |||||||| ||||| |||||||||||    
T  5300203 gttaaggaaaccaaaagtagtaagtttgcattgaattcaacaatattttgacttttaaaaa 5300263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 25381796 - 25381708
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttc 236  Q
    ||||||||||| |||| ||| ||||||| ||| | | |||||| ||||||||||| ||||| | ||||| |||| ||||| | ||||||    
T  25381796 gttaaggaaactaaaaataaaatgtttgaattggatacaacaatattttaactttaaaaaaataaaattaatcatttttttctattttc 25381708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 16908 - 16750
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  16908 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 16810  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  16809 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 16750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 27076 - 26918
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  27076 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 26978  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  26977 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 26918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 37242 - 37084
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||| |||| || ||||| |||    
T  37242 gggcaatggttaaggaagccaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caa 37144  T
Q  240 tgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||| |||||| |||||||||||||||||||| |  | |||||||| || ||||||||    
T  37143 tgctatatttctatttttatccccttatccaatgccctatgggcaatggttagcattctc 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 7274349 - 7274191
Alignment:
Q  142 gcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatg 241  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  7274349 gcaatgattaaggaaaccaaaagtaacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaatttatcacttttcgtcattttccaatg 7274250  T
Q  242 ctatctttctat-tttatccccttatccaatgtcacaagggcaatgattggcattctct 299  Q
     ||| ||||||| ||||| ||||| ||||||||| ||| | ||||| ||  ||||||||    
T  7274249 ttatatttctatatttattcccttgtccaatgtcccaaagacaatggttaacattctct 7274191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 297
Target Start/End: Original strand, 10855379 - 10855562
Alignment:
Q  107 ttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaa 206  Q
    ||||||||||||||||||||||||       ||||||||||||||| |||| |||||||| ||| |||||||  |||||||||||||||| |||||||||    
T  10855379 ttgggtcttgctaaccattgtcct-------gagggcaatggttaaagaaatcaaaagtagcatatttgcatg-gtttcaacaacattttgacttttaaa 10855470  T
Q  207 aagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 297  Q
    |||||||||||||||||||| | |||||| ||||  ||| |||||| ||||||||||||||| |||| | ||||| ||||| || |||||||    
T  10855471 aagttaaatttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgccccaaggacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 7875318 - 7875202
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||| |||||||| ||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  7875318 gggcaatgattaaggaagccaaaagtagcatgtctgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttccaa 7875219  T
Q  240 tgctatctttctatttt 256  Q
    |||||| ||||||||||    
T  7875218 tgctatatttctatttt 7875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 12191466 - 12191598
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    ||||||||||||||||  |||||||| |||||||| |||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||    
T  12191466 ggcaatggttaaggaaggcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttaccaat 12191565  T
Q  241 gctatctttcta-ttttatccccttatccaatg 272  Q
    ||||| |||||| |||||||| |||||||||||    
T  12191566 gctatatttctatttttatccacttatccaatg 12191598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 139 - 285
Target Start/End: Original strand, 5578245 - 5578392
Alignment:
Q  139 agggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttcca 238  Q
    ||||||||||||||||||  |||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || | |  ||||| ||    
T  5578245 agggcaatggttaaggaagtcaaaagtagcatgtttgcatttgtttcaacaatattttgacttttaaaaagttaaatttatcaattctcattatttttca 5578344  T
Q  239 atgctatctttcta-ttttatccccttatccaatgtcacaagggcaat 285  Q
    ||||||| |||||| ||||||||||| |||||||| | ||||||||||    
T  5578345 atgctatatttctatttttatcccctcatccaatgcctcaagggcaat 5578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 26572221 - 26572060
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||| |||| ||||| ||||||||||||||||  ||||||||||||||||||| |||    
T  26572221 gccctcagggcaatggttaaggaagtcaaaagtagcatgtttgcattggttttaacaatattttaacttttaaaatattaaatttatcactttttatcat 26572122  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    ||||     |||| |||||| |||||||||||||||||||| | ||||| ||||| || ||||||||    
T  26572121 tttc-----ctatatttctatttttatccccttatccaatgccccaaggacaatggttagcattctc 26572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 7880564 - 7880448
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    |||||||| |||||||| ||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| ||    
T  7880564 gggcaatgattaaggaagccaaaagtagcatgtctgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttctaa 7880465  T
Q  240 tgctatctttctatttt 256  Q
    |||||| ||||||||||    
T  7880464 tgctatatttctatttt 7880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 299
Target Start/End: Complemental strand, 16437726 - 16437567
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||| |||||||||||||||||        |||| |||||    
T  16437726 gccctgagggcaatggttaaggaaaccaacagtagcatgtttgcattggtttcaacaatatttttacttttaaaaagttaaa--------ttttcaccat 16437635  T
Q  233 tttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattctct 299  Q
    ||||||||| ||| |||||| |||||||| ||||||||||| |  ||| |||||| || |||||||||    
T  16437634 tttccaatgttatatttctatttttatccacttatccaatgccttaagagcaatggttagcattctct 16437567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 272
Target Start/End: Original strand, 6866915 - 6867020
Alignment:
Q  168 catgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttat 266  Q
    ||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||| ||| || ||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatccccttat 6867014  T
Q  267 ccaatg 272  Q
    ||||||    
T  6867015 ccaatg 6867020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 8324248 - 8324125
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||| ||||||||||||||   |||| ||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||| |||| || ||    
T  8324248 gccctcaggacaatggttaaggaaggtaaaaataacatgtttatattggtttcaacaacattttaatttttaaaaagttaaatttatcatttttcacaat 8324149  T
Q  233 tttccaatgctatctttctatttt 256  Q
    ||  ||||||||| ||||||||||    
T  8324148 ttctcaatgctatgtttctatttt 8324125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 31220455 - 31220369
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||||||||||||||  |||||||||||   ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31220455 ttaaggaaaccaaaagtagtatgtttgcattttattcaataacattttaacttttaaaaagttaaattcatcactttttaccatttt 31220369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 32786041 - 32786110
Alignment:
Q  140 gggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaag 209  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  32786041 gggcaatggttaaggaaaccaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaag 32786110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 29692427 - 29692319
Alignment:
Q  191 cattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgatt 289  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| |||| |||| |||||| ||||||||  |||||||||| | ||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgatt 29692328  T
Q  290 ggcattctc 298  Q
     ||||||||    
T  29692327 agcattctc 29692319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 21186145 - 21186059
Alignment:
Q  149 ttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttt 235  Q
    ||||||||| |||||||| ||  |||||||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  21186145 ttaaggaaatcaaaagtagcaattttgcattagattcaataatattttaacttttaaaaagttaaattcatcactttttaccatttt 21186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 12175535 - 12175647
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgc 242  Q
    ||||||||||||||   |||||||  ||||||||||| |||| || ||| ||||||||||||||||||||||||||||| |||||| |||||| |||| |    
T  12175535 caatggttaaggaacttaaaagtagtatgtttgcattggttttaataac-ttttaacttttaaaaagttaaatttatcagtttttatcatttttcaatac 12175633  T
Q  243 tatctttctatttt 256  Q
    ||| ||| ||||||    
T  12175634 tatatttatatttt 12175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 32786259 - 32786346
Alignment:
Q  211 taaatttatcactttttaccattttccaatgctatctttctattttatccccttatccaatgtcacaagggcaatgattggcattctc 298  Q
    |||||||||| ||||| |||||||||||||| ||| ||||||||||   ||||||||||||  | ||||||||||| || ||||||||    
T  32786259 taaatttatctcttttcaccattttccaatgttatatttctatttttatcccttatccaataccccaagggcaatggttagcattctc 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 34780112 - 34780023
Alignment:
Q  143 caatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||||||||||||| ||||||||  || ||| ||||   ||||||||  ||||||||||||||||||||||||  |||||||| |||||    
T  34780112 caatggttaaggaaatcaaaagtagtatatttacattgaattcaacaatgttttaacttttaaaaagttaaattcttcacttttcaccat 34780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 28014638 - 28014740
Alignment:
Q  171 gtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttct-attttatccccttatcca 269  Q
    ||||||||| | |||||||| ||||||||||||||||||| ||| | |||| |||| ||||||| ||||| | || ||||| |||||| || |||| |||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaagtcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacca 28014737  T
Q  270 atg 272  Q
    |||    
T  28014738 atg 28014740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 1947424 - 1947476
Alignment:
Q  187 acaacattttaacttttaaaaagttaaatttatcactttttaccattttccaa 239  Q
    ||||| |||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  1947424 acaactttttgacttttagaaagttgaatttaacactttttaccattttccaa 1947476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 12226475 - 12226352
Alignment:
Q  133 gccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccat 232  Q
    ||||| ||| ||||||||||||||||||||| ||  || ||| ||||   ||||||||  |||| ||||| |||||||||||||  |||||||| | |||    
T  12226475 gccctcaggacaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaatgtttttactttcaaaaagttaaattcttcacttttaatcat 12226376  T
Q  233 tttccaatgctatctttctatttt 256  Q
    ||  |||| | || ||||||||||    
T  12226375 ttctcaatacaatgtttctatttt 12226352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 19645941 - 19645995
Alignment:
Q  105 ttttgggtcttgctaaccattgtcctcagccctgagggcaatggttaaggaaaccaaaagta 166  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||| |||||||    
T  19645941 ttttgggtcttgctaaccattgtcctc-------agggcaatggttaaggaaactaaaagta 19645995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 29964274 - 29964349
Alignment:
Q  141 ggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatt 216  Q
    |||||||||||||||| |||||| ||| || ||| ||||   ||||||||  |||| |||||||||||||||||||    
T  29964274 ggcaatggttaaggaacccaaaaataatatatttacattgaattcaacaatgttttgacttttaaaaagttaaatt 29964349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 5029546 - 5029489
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||  ||||||||||||||||||||||||| |  || |||||||||||| ||||    
T  5029546 ttcaacactattttaacttttaaaaagttaaattcacaacattttaccatttttcaat 5029489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 27127601 - 27127528
Alignment:
Q  183 ttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctatctttctatttt 256  Q
    |||||||| || || ||||||||||||||||||| |||| |||| |||||||  |||| | || ||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctatttt 27127528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 392261 - 392164
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaatgctat 245  Q
    ||||||||| | ||||||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  392261 gttaaggaagcgaaaagtagcatgtttgcatcggtttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttcaatgctat 392164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 4764 - 4705
Alignment:
Q  159 caaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaattta 218  Q
    |||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  4764 caaaagtagcatgtttgcattaatttcaacaacatattgacttttaaaaagttaaattta 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 297
Target Start/End: Complemental strand, 4337 - 4249
Alignment:
Q  210 ttaaatttatcactttttaccattttccaatgctatctttcta-ttttatccccttatccaatgtcacaagggcaatgattggcattct 297  Q
    ||||||||||||||||| || ||||||||||||||| ||| || |||||||||  ||||||||||| |||  ||||||||| |||||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaaaagcaatgattagcattct 4249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 39553 - 39675
Alignment:
Q  132 agccctgagggcaatggttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttttacca 231  Q
    |||||| ||||||||||||||||||||||||||||  || ||| ||||   |||||||  || || |||||||||||||||||||  ||| |||| || |    
T  39553 agccctcagggcaatggttaaggaaaccaaaagtagtatatttacattgaattcaaca--atgttgacttttaaaaagttaaattcttcagttttcacta 39650  T
Q  232 ttttccaatgctatctttctatttt 256  Q
    ||||||||| | || ||||||||||    
T  39651 ttttccaatacaatgtttctatttt 39675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 37507 - 37430
Alignment:
Q  148 gttaaggaaaccaaaagtaacatgtttgcattagtttcaacaacattttaacttttaaaaagttaaatttatcactttt 226  Q
    |||||||||| ||||||||  ||||| ||||| | ||||| |||||||| |||||| |||||||||||| |||| ||||    
T  37507 gttaaggaaatcaaaagtagaatgtt-gcattggattcaataacattttgacttttgaaaagttaaattcatcattttt 37430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 711 - 655
Alignment:
Q  184 tcaacaacattttaacttttaaaaagttaaatttatcactttttaccattttccaat 240  Q
    |||||||  ||||||||||||||||||| |||| |  |||||| |||||||||||||    
T  711 tcaacaattttttaacttttaaaaagttgaattcacaacttttcaccattttccaat 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University