View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17083_low_33 (Length: 299)

Name: NF17083_low_33
Description: NF17083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17083_low_33
NF17083_low_33
[»] chr3 (47 HSPs)
chr3 (19-202)||(37110729-37110908)
chr3 (203-288)||(48159897-48159982)
chr3 (201-288)||(48160302-48160389)
chr3 (203-288)||(40848521-40848605)
chr3 (203-288)||(40848930-40849015)
chr3 (203-288)||(53687888-53687973)
chr3 (201-288)||(10348768-10348855)
chr3 (201-288)||(27238869-27238956)
chr3 (201-288)||(42673265-42673351)
chr3 (202-288)||(42672977-42673062)
chr3 (202-288)||(47666304-47666390)
chr3 (203-288)||(27238465-27238550)
chr3 (201-288)||(24485429-24485515)
chr3 (201-288)||(53766161-53766248)
chr3 (203-288)||(26007182-26007266)
chr3 (200-288)||(22429565-22429652)
chr3 (201-288)||(53688272-53688358)
chr3 (210-288)||(3353520-3353597)
chr3 (201-278)||(3353126-3353202)
chr3 (204-288)||(22429159-22429243)
chr3 (201-288)||(42456164-42456249)
chr3 (206-288)||(26007588-26007670)
chr3 (203-288)||(36180959-36181044)
chr3 (224-288)||(24485042-24485106)
chr3 (203-288)||(36180556-36180639)
chr3 (200-288)||(8314010-8314098)
chr3 (201-288)||(44007965-44008052)
chr3 (201-288)||(44008370-44008456)
chr3 (204-288)||(10348480-10348564)
chr3 (203-267)||(53766569-53766633)
chr3 (203-266)||(42455790-42455853)
chr3 (203-288)||(47665911-47665996)
chr3 (201-257)||(20969019-20969075)
chr3 (202-281)||(21896487-21896565)
chr3 (206-288)||(1928403-1928484)
chr3 (198-256)||(45060872-45060930)
chr3 (201-257)||(10293909-10293965)
chr3 (201-256)||(1927770-1927825)
chr3 (203-256)||(8315083-8315135)
chr3 (202-257)||(17372297-17372352)
chr3 (201-259)||(3644781-3644839)
chr3 (203-257)||(18875191-18875245)
chr3 (203-257)||(20968718-20968772)
chr3 (203-257)||(47871122-47871175)
chr3 (203-256)||(18874882-18874935)
chr3 (203-259)||(21895657-21895714)
chr3 (202-250)||(45060595-45060643)
[»] chr7 (44 HSPs)
chr7 (201-288)||(37888831-37888918)
chr7 (202-288)||(9035262-9035348)
chr7 (198-288)||(37889228-37889318)
chr7 (203-288)||(10533034-10533119)
chr7 (203-288)||(37972365-37972450)
chr7 (206-288)||(20418891-20418973)
chr7 (199-288)||(13741553-13741642)
chr7 (203-288)||(20419293-20419378)
chr7 (203-288)||(22740156-22740241)
chr7 (206-288)||(18863970-18864052)
chr7 (203-288)||(3205062-3205147)
chr7 (203-288)||(17156967-17157052)
chr7 (203-288)||(37971960-37972045)
chr7 (200-288)||(3204666-3204752)
chr7 (203-288)||(13744202-13744286)
chr7 (203-288)||(29292922-29293007)
chr7 (201-288)||(29293315-29293402)
chr7 (203-288)||(9034867-9034953)
chr7 (202-288)||(48359319-48359404)
chr7 (201-288)||(36527767-36527854)
chr7 (206-288)||(22740560-22740641)
chr7 (203-288)||(18864371-18864455)
chr7 (203-288)||(38826882-38826967)
chr7 (203-288)||(42418591-42418676)
chr7 (206-288)||(42418997-42419079)
chr7 (201-281)||(44599487-44599567)
chr7 (203-281)||(44600111-44600189)
chr7 (207-288)||(48359627-48359707)
chr7 (203-281)||(13863313-13863391)
chr7 (203-281)||(13863933-13864010)
chr7 (203-267)||(16198967-16199031)
chr7 (198-257)||(3687656-3687715)
chr7 (206-284)||(36527387-36527464)
chr7 (203-280)||(46816288-46816365)
chr7 (203-281)||(8643742-8643820)
chr7 (203-257)||(9412325-9412379)
chr7 (201-257)||(13772901-13772957)
chr7 (201-250)||(27096045-27096093)
chr7 (201-250)||(27182210-27182258)
chr7 (203-259)||(13772641-13772697)
chr7 (203-250)||(23686724-23686771)
chr7 (203-257)||(9412023-9412077)
chr7 (201-257)||(3687351-3687408)
chr7 (204-259)||(18925320-18925373)
[»] chr4 (51 HSPs)
chr4 (201-288)||(32703619-32703706)
chr4 (198-288)||(4239335-4239425)
chr4 (203-288)||(28196742-28196827)
chr4 (204-288)||(25161879-25161963)
chr4 (203-288)||(9380307-9380392)
chr4 (203-288)||(9380710-9380795)
chr4 (203-288)||(28196346-28196431)
chr4 (203-288)||(39744434-39744519)
chr4 (201-288)||(169408-169495)
chr4 (203-288)||(9023244-9023329)
chr4 (203-288)||(9023649-9023734)
chr4 (201-288)||(43292326-43292413)
chr4 (203-288)||(169013-169099)
chr4 (203-284)||(293190-293271)
chr4 (203-288)||(26207715-26207800)
chr4 (203-288)||(32703225-32703310)
chr4 (203-288)||(39744030-39744115)
chr4 (203-287)||(292782-292866)
chr4 (204-288)||(43292038-43292122)
chr4 (202-288)||(23540221-23540307)
chr4 (202-288)||(39086592-39086678)
chr4 (203-288)||(26207361-26207445)
chr4 (203-288)||(48405962-48406046)
chr4 (203-288)||(23539841-23539924)
chr4 (221-288)||(44468892-44468959)
chr4 (217-288)||(48406354-48406425)
chr4 (203-281)||(50678779-50678857)
chr4 (203-288)||(36095817-36095902)
chr4 (200-281)||(50679400-50679481)
chr4 (201-281)||(36096451-36096531)
chr4 (198-281)||(56505688-56505771)
chr4 (203-284)||(39912054-39912134)
chr4 (221-288)||(25162282-25162349)
chr4 (203-281)||(43051228-43051306)
chr4 (203-281)||(45830172-45830250)
chr4 (225-288)||(12757788-12757851)
chr4 (201-288)||(39912456-39912542)
chr4 (224-288)||(12758173-12758237)
chr4 (206-281)||(43050610-43050685)
chr4 (201-259)||(16555815-16555873)
chr4 (204-281)||(11529169-11529246)
chr4 (203-259)||(24775781-24775837)
chr4 (204-257)||(8181992-8182046)
chr4 (203-257)||(13198906-13198960)
chr4 (203-257)||(18077202-18077256)
chr4 (207-257)||(49178816-49178866)
chr4 (203-257)||(3930480-3930533)
chr4 (203-257)||(16555515-16555569)
chr4 (203-281)||(56506550-56506628)
chr4 (204-257)||(22681576-22681628)
chr4 (203-259)||(11241659-11241714)
[»] chr1 (65 HSPs)
chr1 (201-288)||(9347124-9347211)
chr1 (201-288)||(48105085-48105172)
chr1 (201-288)||(50430050-50430137)
chr1 (203-284)||(32163016-32163097)
chr1 (201-288)||(13918444-13918531)
chr1 (201-288)||(26814692-26814779)
chr1 (201-288)||(27172114-27172200)
chr1 (205-288)||(50526441-50526524)
chr1 (198-288)||(28633715-28633805)
chr1 (206-288)||(46823846-46823928)
chr1 (206-288)||(48104681-48104763)
chr1 (203-288)||(26815088-26815173)
chr1 (198-282)||(6703869-6703953)
chr1 (201-288)||(21687023-21687110)
chr1 (198-288)||(9347520-9347609)
chr1 (206-288)||(28634126-28634208)
chr1 (203-288)||(20480168-20480252)
chr1 (203-288)||(46824247-46824332)
chr1 (204-288)||(13918836-13918920)
chr1 (201-288)||(49318135-49318221)
chr1 (201-288)||(50615590-50615676)
chr1 (201-288)||(50623418-50623504)
chr1 (206-288)||(42611188-42611270)
chr1 (203-288)||(999494-999578)
chr1 (203-288)||(4692402-4692487)
chr1 (203-288)||(6703460-6703545)
chr1 (203-288)||(44911025-44911110)
chr1 (201-288)||(20371321-20371408)
chr1 (201-288)||(42611583-42611670)
chr1 (206-288)||(999115-999196)
chr1 (202-288)||(49317751-49317836)
chr1 (203-288)||(19008719-19008804)
chr1 (201-278)||(20480591-20480667)
chr1 (203-284)||(27172514-27172595)
chr1 (203-286)||(20371040-20371121)
chr1 (206-288)||(44911406-44911488)
chr1 (203-288)||(50429656-50429741)
chr1 (201-288)||(47498299-47498384)
chr1 (203-281)||(49284409-49284487)
chr1 (203-288)||(39691969-39692054)
chr1 (207-288)||(50949534-50949615)
chr1 (201-288)||(49318412-49318498)
chr1 (201-281)||(6002235-6002315)
chr1 (203-279)||(21687445-21687520)
chr1 (201-279)||(50949159-50949237)
chr1 (208-273)||(32162734-32162799)
chr1 (203-259)||(8108991-8109047)
chr1 (203-250)||(50615240-50615287)
chr1 (203-250)||(50623068-50623115)
chr1 (203-265)||(19007735-19007796)
chr1 (206-288)||(44224088-44224169)
chr1 (203-257)||(47955306-47955360)
chr1 (201-259)||(48190769-48190827)
chr1 (203-288)||(4692022-4692106)
chr1 (205-281)||(6002870-6002946)
chr1 (203-259)||(48191353-48191409)
chr1 (204-259)||(47498493-47498547)
chr1 (231-281)||(49285031-49285081)
chr1 (206-255)||(22149701-22149750)
chr1 (203-256)||(39690794-39690847)
chr1 (202-250)||(1176716-1176763)
chr1 (205-257)||(17518602-17518653)
chr1 (202-250)||(41082908-41082956)
chr1 (203-257)||(13589659-13589712)
chr1 (203-257)||(47955608-47955662)
[»] chr5 (47 HSPs)
chr5 (203-288)||(12498567-12498652)
chr5 (203-288)||(26571133-26571218)
chr5 (206-288)||(21207229-21207311)
chr5 (203-288)||(12498897-12498982)
chr5 (201-288)||(3888237-3888324)
chr5 (202-288)||(19514524-19514611)
chr5 (203-288)||(19514932-19515017)
chr5 (203-288)||(26570729-26570814)
chr5 (203-288)||(37780320-37780404)
chr5 (204-288)||(22729409-22729492)
chr5 (206-288)||(2817152-2817234)
chr5 (206-288)||(43463759-43463840)
chr5 (203-288)||(34147479-34147564)
chr5 (203-284)||(37610202-37610282)
chr5 (203-288)||(43464161-43464245)
chr5 (198-286)||(10098514-10098602)
chr5 (201-284)||(37780715-37780798)
chr5 (206-288)||(3888631-3888713)
chr5 (203-288)||(25940521-25940606)
chr5 (204-288)||(25940983-25941067)
chr5 (205-288)||(2817544-2817626)
chr5 (198-281)||(18817587-18817670)
chr5 (201-288)||(37610587-37610673)
chr5 (201-284)||(22729006-22729088)
chr5 (201-288)||(30401880-30401967)
chr5 (206-288)||(10098910-10098991)
chr5 (203-288)||(34147141-34147224)
chr5 (206-288)||(11316717-11316799)
chr5 (206-288)||(11316943-11317025)
chr5 (203-281)||(18816952-18817030)
chr5 (206-288)||(41072183-41072264)
chr5 (206-279)||(11351405-11351478)
chr5 (203-281)||(11350808-11350885)
chr5 (201-259)||(18433013-18433071)
chr5 (203-288)||(42919305-42919389)
chr5 (203-250)||(16466749-16466796)
chr5 (203-257)||(25115757-25115811)
chr5 (203-257)||(25174849-25174903)
chr5 (203-259)||(26020450-26020506)
chr5 (199-259)||(34576863-34576922)
chr5 (203-257)||(18433316-18433370)
chr5 (203-257)||(25116061-25116115)
chr5 (203-257)||(25175151-25175205)
chr5 (206-280)||(31569910-31569983)
chr5 (203-259)||(22428934-22428989)
chr5 (209-255)||(16726084-16726130)
chr5 (203-259)||(22429194-22429249)
[»] scaffold0017 (2 HSPs)
scaffold0017 (201-288)||(185243-185330)
scaffold0017 (204-288)||(184840-184924)
[»] chr6 (28 HSPs)
chr6 (202-288)||(10087827-10087913)
chr6 (202-288)||(33974268-33974354)
chr6 (201-288)||(32733965-32734052)
chr6 (203-288)||(7654517-7654602)
chr6 (203-288)||(29074341-29074425)
chr6 (203-288)||(29079105-29079189)
chr6 (203-288)||(29106914-29106998)
chr6 (204-288)||(22755058-22755142)
chr6 (201-288)||(22684327-22684413)
chr6 (201-288)||(22754655-22754741)
chr6 (201-281)||(33828988-33829068)
chr6 (198-281)||(33829612-33829695)
chr6 (203-288)||(2354779-2354864)
chr6 (203-284)||(13177029-13177109)
chr6 (201-288)||(2354407-2354493)
chr6 (201-259)||(3403715-3403773)
chr6 (206-288)||(32733560-32733642)
chr6 (203-257)||(3403989-3404043)
chr6 (223-288)||(13176639-13176704)
chr6 (201-288)||(33973862-33973949)
chr6 (203-257)||(18241854-18241908)
chr6 (201-257)||(11656782-11656838)
chr6 (206-257)||(3825530-3825580)
chr6 (203-250)||(21032287-21032334)
chr6 (203-257)||(10039676-10039729)
chr6 (203-257)||(13579651-13579704)
chr6 (201-250)||(30388060-30388108)
chr6 (201-257)||(18242156-18242212)
[»] chr2 (47 HSPs)
chr2 (206-288)||(8851151-8851233)
chr2 (203-288)||(8851551-8851636)
chr2 (203-284)||(37720204-37720285)
chr2 (201-288)||(7664642-7664729)
chr2 (201-288)||(17850976-17851062)
chr2 (201-288)||(26692789-26692876)
chr2 (203-288)||(7664248-7664333)
chr2 (202-288)||(16910826-16910912)
chr2 (203-288)||(5378661-5378746)
chr2 (205-288)||(6325316-6325399)
chr2 (210-288)||(6324924-6325002)
chr2 (203-288)||(5379928-5380013)
chr2 (203-288)||(17851371-17851456)
chr2 (203-288)||(41790881-41790966)
chr2 (204-288)||(16911238-16911321)
chr2 (206-288)||(5793450-5793532)
chr2 (204-286)||(18750097-18750178)
chr2 (206-288)||(26692399-26692481)
chr2 (201-288)||(19141818-19141903)
chr2 (205-288)||(19141446-19141528)
chr2 (203-288)||(7979567-7979650)
chr2 (197-281)||(2639458-2639542)
chr2 (203-281)||(2638820-2638898)
chr2 (203-281)||(26841587-26841665)
chr2 (206-288)||(41790494-41790575)
chr2 (203-288)||(7979972-7980056)
chr2 (201-281)||(26842214-26842294)
chr2 (204-281)||(18296077-18296154)
chr2 (206-281)||(7591204-7591279)
chr2 (202-281)||(38490817-38490895)
chr2 (203-257)||(20347464-20347518)
chr2 (203-257)||(30190923-30190977)
chr2 (201-281)||(7591826-7591906)
chr2 (201-257)||(11883926-11883982)
chr2 (203-259)||(18296691-18296747)
chr2 (200-288)||(18749723-18749810)
chr2 (203-259)||(24832331-24832387)
chr2 (203-257)||(6171456-6171510)
chr2 (203-257)||(11883623-11883677)
chr2 (203-250)||(43495309-43495356)
chr2 (201-257)||(26737781-26737837)
chr2 (201-257)||(30191225-30191281)
chr2 (206-257)||(40469729-40469780)
chr2 (201-250)||(43495612-43495660)
chr2 (203-255)||(6495723-6495775)
chr2 (206-257)||(18055169-18055221)
chr2 (201-257)||(40469425-40469481)
[»] chr8 (49 HSPs)
chr8 (203-288)||(37396708-37396793)
chr8 (201-288)||(37397114-37397201)
chr8 (203-288)||(41662521-41662606)
chr8 (203-288)||(6199065-6199150)
chr8 (203-288)||(17431287-17431372)
chr8 (203-288)||(24473737-24473822)
chr8 (200-288)||(34498119-34498207)
chr8 (201-288)||(9623500-9623587)
chr8 (201-288)||(24473341-24473428)
chr8 (203-288)||(20861607-20861692)
chr8 (203-288)||(34498524-34498609)
chr8 (206-288)||(15444616-15444698)
chr8 (205-267)||(25438794-25438856)
chr8 (206-288)||(25439095-25439176)
chr8 (203-288)||(6198658-6198743)
chr8 (201-281)||(39724024-39724104)
chr8 (205-288)||(15444213-15444296)
chr8 (203-281)||(9823337-9823415)
chr8 (201-281)||(13027257-13027337)
chr8 (201-288)||(16169172-16169258)
chr8 (201-288)||(16169576-16169663)
chr8 (203-281)||(13026635-13026713)
chr8 (203-281)||(13936723-13936800)
chr8 (206-288)||(33727074-33727156)
chr8 (203-288)||(2856526-2856611)
chr8 (201-281)||(9822746-9822826)
chr8 (201-281)||(22851388-22851468)
chr8 (205-288)||(15442765-15442848)
chr8 (203-281)||(13937365-13937443)
chr8 (201-281)||(3307336-3307416)
chr8 (199-259)||(37752080-37752140)
chr8 (201-257)||(41662403-41662459)
chr8 (199-257)||(765730-765788)
chr8 (201-259)||(23123336-23123394)
chr8 (199-256)||(3463946-3464003)
chr8 (203-255)||(12281124-12281176)
chr8 (201-257)||(15156185-15156241)
chr8 (206-281)||(15042148-15042223)
chr8 (200-257)||(16929242-16929299)
chr8 (205-250)||(33726696-33726741)
chr8 (201-257)||(37752416-37752472)
chr8 (202-273)||(9623864-9623936)
chr8 (203-257)||(15155883-15155937)
chr8 (203-257)||(16928942-16928996)
chr8 (231-281)||(39723430-39723480)
chr8 (203-257)||(43246176-43246230)
chr8 (200-257)||(43245868-43245925)
chr8 (201-257)||(12281426-12281482)
chr8 (201-255)||(43162232-43162285)
[»] scaffold0460 (2 HSPs)
scaffold0460 (203-288)||(330-415)
scaffold0460 (201-284)||(736-818)
[»] scaffold0029 (2 HSPs)
scaffold0029 (203-288)||(9905-9991)
scaffold0029 (203-265)||(10311-10371)
[»] scaffold0041 (2 HSPs)
scaffold0041 (203-288)||(38664-38749)
scaffold0041 (236-288)||(38284-38336)
[»] scaffold0176 (2 HSPs)
scaffold0176 (203-288)||(19621-19705)
scaffold0176 (198-288)||(20012-20102)
[»] scaffold0069 (2 HSPs)
scaffold0069 (201-288)||(50475-50562)
scaffold0069 (203-286)||(50075-50156)
[»] scaffold0328 (2 HSPs)
scaffold0328 (201-281)||(6150-6230)
scaffold0328 (203-281)||(6771-6849)
[»] scaffold0802 (2 HSPs)
scaffold0802 (201-257)||(1420-1476)
scaffold0802 (201-257)||(1116-1172)
[»] scaffold0001 (2 HSPs)
scaffold0001 (201-257)||(438928-438984)
scaffold0001 (203-249)||(183670-183716)
[»] scaffold0319 (2 HSPs)
scaffold0319 (203-257)||(6394-6448)
scaffold0319 (202-257)||(6697-6751)
[»] scaffold0192 (1 HSPs)
scaffold0192 (203-257)||(25369-25423)
[»] scaffold0110 (1 HSPs)
scaffold0110 (203-257)||(45807-45860)
[»] scaffold0535 (1 HSPs)
scaffold0535 (203-250)||(10012-10059)
[»] scaffold0015 (1 HSPs)
scaffold0015 (198-255)||(17158-17214)


Alignment Details
Target: chr3 (Bit Score: 146; Significance: 6e-77; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 37110729 - 37110908
Alignment:
Q  19 ccactcactttaatttcacggttaattacaccacttggggagaattttgaatatataatannnnnnnattaagctgatgtatgaacaattgaaacataac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  37110729 ccactcactttaatttcacggttaattacaccacttggggagaattttgaatatataatatttttttattaagctgatgtatgaacaattgaaacataac 37110828  T
Q  119 aattttcttgttggtgtggcttatcttgtcttgattggatagggctaaccccccaattcacaatcccgcctctctcaggatatt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  37110829 aattttcttgttggtgtggcttatcttgtcttgattggatagggctaa----ccaattcacaatcccgcctctctcaggatatt 37110908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 48159897 - 48159982
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48159982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 48160389 - 48160302
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48160389 ttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48160302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 40848521 - 40848605
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40848521 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 40848605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 40849015 - 40848930
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 40848930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 53687888 - 53687973
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 53687973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 10348855 - 10348768
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10348855 ttggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10348768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 27238956 - 27238869
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  27238956 ttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 27238869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 42673351 - 42673265
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42673351 ttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 42672977 - 42673062
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  42672977 tggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 42673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 47666390 - 47666304
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||    
T  47666390 tggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctat 47666304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 27238465 - 27238550
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  27238465 ggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 27238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 24485515 - 24485429
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  24485515 ttggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 24485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 53766161 - 53766248
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53766161 ttggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 53766248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 26007182 - 26007266
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  26007182 ggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 26007266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 22429652 - 22429565
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22429652 attgacttaattgcacttt-ccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22429565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 53688358 - 53688272
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  53688358 ttggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctat 53688272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 3353597 - 3353520
Alignment:
Q  210 ttgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3353597 ttgcacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 3353520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 3353126 - 3353202
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattt 278  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  3353126 ttggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 22429159 - 22429243
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctat 22429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 42456249 - 42456164
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||  ||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42456249 ttggcttaattgcacttt--ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42456164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 26007670 - 26007588
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| |||  |||| |||||||||||||||||||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctat 26007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 36181044 - 36180959
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||  |||||||    
T  36181044 ggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctat 36180959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 24485042 - 24485106
Alignment:
Q  224 cctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  24485042 cctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctat 24485106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 36180556 - 36180639
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  36180556 ggcttaattgcacatttcccc--tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctat 36180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 8314010 - 8314098
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||| ||  ||||||||| |||||||||| ||||||    
T  8314010 attggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctat 8314098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 44007965 - 44008052
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||  ||||||||| | ||| || |  |||||||||||||||||||||||||||||||    
T  44007965 ttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 44008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 44008456 - 44008370
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||  || ||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||| ||||||||    
T  44008456 ttggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 44008370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 10348480 - 10348564
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| ||| ||||||||| ||||||| | ||||| || |||||| ||||||||||||||||||| |||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctat 10348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 53766633 - 53766569
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaa 267  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 42455790 - 42455853
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagtttta 266  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||    
T  42455790 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 47665911 - 47665996
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||| |||| ||| |||| ||||||| |||||| || |||||    
T  47665911 ggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctat 47665996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 20969075 - 20969019
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  20969075 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 21896565 - 21896487
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||| |||| |||| |||| |||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  21896565 tggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgc 21896487  T

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Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 1928484 - 1928403
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| |||||| ||||||  |||||||||||||||||||| ||||||||| ||||||||||| | |||||| ||||||    
T  1928484 ttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctat 1928403  T

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Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 45060930 - 45060872
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    |||| |||||||||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  45060930 atataggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 10293965 - 10293909
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  10293965 ttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 10293909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 1927770 - 1927825
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    ||||||||||||||| ||||||||||||  |||||||||| ||||||||| |||||    
T  1927770 ttggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 8315135 - 8315083
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||| |||||    
T  8315135 ggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 17372297 - 17372352
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||| ||| ||||||||  ||||| |||||||||||||| ||||||    
T  17372297 tggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcacccc 17372352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 3644839 - 3644781
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||| ||||||||| |||  ||||  |||||||||||||| ||||||||    
T  3644839 ttggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 18875245 - 18875191
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||| ||||||||  ||||| |||||| ||||||| ||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcacccc 18875191  T

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Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 20968718 - 20968772
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||| ||||||||||||  ||||  |||||||||||||| ||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcacccc 20968772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 47871175 - 47871122
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  47871175 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    |||| |||||||||||| ||||||||  ||||| |||||||||||||| |||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 21895657 - 21895714
Alignment:
Q  203 ggcttaattgcacttttccccc-ctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||| |||| ||||  ||||||||||||| |||||| ||||||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat 21895714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 45060595 - 45060643
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||||||| ||||  ||||| |||| |||||||||    
T  45060595 tggcttaattgcacttttccccactatcttttgctaattatgcgatttt 45060643  T

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Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 37888831 - 37888918
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37888831 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37888918  T

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Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 9035348 - 9035262
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9035348 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9035262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 37889318 - 37889228
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37889318 atataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37889228  T

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Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 10533034 - 10533119
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10533119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 37972450 - 37972365
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972365  T

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Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 20418891 - 20418973
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 13741553 - 13741642
Alignment:
Q  199 tattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13741553 tattggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13741642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 20419378 - 20419293
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20419293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 22740156 - 22740241
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22740241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 18863970 - 18864052
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 18864052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 3205147 - 3205062
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 3205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 17156967 - 17157052
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 17157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 37971960 - 37972045
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 3204666 - 3204752
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  3204666 attggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 3204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 13744286 - 13744202
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13744286 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13744202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 29292922 - 29293007
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctat 29293007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 29293402 - 29293315
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||    
T  29293402 ttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctat 29293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 9034867 - 9034953
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttaca-ccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctat 9034953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 48359319 - 48359404
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  48359319 tggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 48359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 36527854 - 36527767
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  36527854 ttggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 36527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 22740641 - 22740560
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 22740560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 18864455 - 18864371
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  18864455 ggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctat 18864371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 38826967 - 38826882
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| || |||||||||||||    
T  38826967 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctat 38826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 42418591 - 42418676
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||  | || |||||||||||||||||||||||||||||||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctat 42418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 42419079 - 42418997
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc-atagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  42419079 ttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctat 42418997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 44599487 - 44599567
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  44599487 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 44600189 - 44600111
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44600111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 48359707 - 48359627
Alignment:
Q  207 taattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||| |||| |||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  48359707 taattgcactttttcccc-tatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctat 48359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 13863313 - 13863391
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 13864010 - 13863933
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcga-tttgcaccccatatttttaaacgagcgattttgc 13863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 16199031 - 16198967
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaa 267  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||||    
T  16199031 ggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 3687715 - 3687656
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  3687715 atattggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 3687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 36527387 - 36527464
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||| ||||    
T  36527387 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttcccc 36527464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 46816365 - 46816288
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttg 280  Q
    ||||||||||||||||| ||| ||||  ||| |||||| ||||||||| ||||||||| |||||||||||||||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 8643820 - 8643742
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||||  ||||||  ||| |||||||||||||||| ||||||||  | ||||||||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgc 8643742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 9412379 - 9412325
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 13772957 - 13772901
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  13772957 ttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 27096045 - 27096093
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  27096045 ttggcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 27096093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 27182258 - 27182210
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  27182258 ttggcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 27182210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 13772641 - 13772697
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||| ||||||  ||||| ||||||| |||||| ||||||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccat 13772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 23686771 - 23686724
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgatttt 23686724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 9412023 - 9412077
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||||| |||  ||||  |||||||||||||| ||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 9412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 3687351 - 3687408
Alignment:
Q  201 ttggcttaattgcactttt-cccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||| |||||||||  ||||  |||||||||||||| ||||||    
T  3687351 ttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcacccc 3687408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 18925373 - 18925320
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||| |  |||| ||||| |||||||||||||| ||||||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcaccccat 18925320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 32703706 - 32703619
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32703706 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 32703619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 4239425 - 4239335
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4239425 atattggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 4239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 28196827 - 28196742
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 25161879 - 25161963
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 25161963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 9380307 - 9380392
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctat 9380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 9380795 - 9380710
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 9380710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 28196346 - 28196431
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 39744519 - 39744434
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 39744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 169495 - 169408
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  169495 ttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 9023244 - 9023329
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctat 9023329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 9023734 - 9023649
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 9023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 43292413 - 43292326
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  43292413 ttggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 43292326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 169013 - 169099
Alignment:
Q  203 ggcttaattgcacttttc-ccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctat 169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 293271 - 293190
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 26207800 - 26207715
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 32703225 - 32703310
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctat 32703310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 39744030 - 39744115
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  39744030 ggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctat 39744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 292782 - 292866
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccccta 287  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||||    
T  292782 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgcccccta 292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 43292038 - 43292122
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43292122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 23540307 - 23540221
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  23540307 tggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctat 23540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 39086678 - 39086592
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  39086678 tggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctat 39086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 26207361 - 26207445
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  26207361 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 48405962 - 48406046
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  48405962 ggcttaattgcacttttcccc-ctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctat 48406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 23539841 - 23539924
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  23539841 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctat 23539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 44468959 - 44468892
Alignment:
Q  221 ccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  44468959 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 44468892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 48406425 - 48406354
Alignment:
Q  217 tttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 48406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 50678779 - 50678857
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 50678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 36095817 - 36095902
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat 36095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 50679481 - 50679400
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||||||| |||||||  |||||||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  50679481 attggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgc 50679400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 36096531 - 36096451
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  36096531 ttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 36096451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 56505688 - 56505771
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||  |||| |||||||    
T  56505688 atataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgc 56505771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 39912054 - 39912134
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  39912054 ggcttaattgcacttttcctccctatagtttattaattgtgcgattttaca-tccatagttttaaacgaacgattttgcccc 39912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 25162349 - 25162282
Alignment:
Q  221 ccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| |||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  25162349 ccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctat 25162282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 43051306 - 43051228
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  ||||||||||||| |||||| ||||||||  ||||||||||||||||||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 43051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 45830250 - 45830172
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||| ||||||||| |||||||  |||| ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  45830250 ggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgc 45830172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 12757788 - 12757851
Alignment:
Q  225 ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| ||||||||||||||| || | |||||||||||||||||||||||| |||||||    
T  12757788 ctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctat 12757851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 39912542 - 39912456
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||| |||||||||  | ||||||||  ||||||||||||||| || |||||||||||||||||| ||||||||| |||||    
T  39912542 ttggcttaattacacttttccttc-tatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctat 39912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 12758237 - 12758173
Alignment:
Q  224 cctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| || | |||| ||| |||||||||||||||||| ||||||||||||||    
T  12758237 cctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctat 12758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 43050610 - 43050685
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||  ||||||  ||| |||||||||||||||| ||||||||  ||||||||||| ||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgc 43050685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 16555873 - 16555815
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||||    
T  16555873 ttggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccat 16555815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 11529169 - 11529246
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||   ||||||||||||| |||||| ||||||||  |||||| || ||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgc 11529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 24775837 - 24775781
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||||| |||||  |||| ||||||||||||||| ||||||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccat 24775781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  204 gcttaattgcacttttcccccctatagttt-gccaattgtgcgattttacacccc 257  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 13198960 - 13198906
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 13198906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 18077256 - 18077202
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 49178866 - 49178816
Alignment:
Q  207 taattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||| |||||||  |||||||||||||||||||| ||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacccc 49178816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 3930533 - 3930480
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  3930533 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 16555515 - 16555569
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||||| |||  ||||  |||||||||||||| ||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 16555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 56506628 - 56506550
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| ||| |||  |||||||||||||| |||||  || ||||  ||||||  ||||||||||||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgc 56506550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 22681576 - 22681628
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||| |||||||||  |||| ||||||||||||||| ||||||    
T  22681576 gcttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 11241714 - 11241659
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||| ||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  11241714 ggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccat 11241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 9347124 - 9347211
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9347124 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9347211  T

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Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 48105172 - 48105085
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48105172 ttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48105085  T

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Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 50430137 - 50430050
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50430137 ttggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50430050  T

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Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 32163097 - 32163016
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 32163016  T

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Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 13918444 - 13918531
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13918444 ttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13918531  T

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Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 26814692 - 26814779
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26814692 ttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26814779  T

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Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 27172114 - 27172200
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27172114 ttggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 27172200  T

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Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 50526524 - 50526441
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50526441  T

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Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 28633715 - 28633805
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  28633715 atataggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 28633805  T

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Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 46823846 - 46823928
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 46823928  T

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Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 48104681 - 48104763
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48104763  T

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Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 26815173 - 26815088
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26815173 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26815088  T

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Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 6703953 - 6703869
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcc 282  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  6703953 atattggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcc 6703869  T

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Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 21687023 - 21687110
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  21687023 ttggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctat 21687110  T

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Target: chr1; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 9347609 - 9347520
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  9347609 atataggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 9347520  T

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Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 28634208 - 28634126
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 28634126  T

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Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 20480168 - 20480252
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20480168 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20480252  T

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Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 46824332 - 46824247
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  46824332 ggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 46824247  T

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Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 13918920 - 13918836
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctat 13918836  T

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Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 49318221 - 49318135
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  49318221 ttggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 49318135  T

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Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 50615676 - 50615590
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  50615676 ttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50615590  T

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Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 50623504 - 50623418
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  50623504 ttggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50623418  T

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Target: chr1; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 42611188 - 42611270
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctat 42611270  T

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Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 999578 - 999494
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  999578 ggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctat 999494  T

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Target: chr1; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 4692487 - 4692402
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctat 4692402  T

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Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 6703460 - 6703545
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  6703460 ggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 6703545  T

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Target: chr1; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 44911025 - 44911110
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 44911110  T

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Target: chr1; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 20371408 - 20371321
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttaca-ccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  20371408 ttggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 20371321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 42611670 - 42611583
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  42611670 ttggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctat 42611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 999115 - 999196
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  999115 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 999196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 49317751 - 49317836
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||    
T  49317751 tggcttaattgcacttttcccc-ctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctat 49317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 19008804 - 19008719
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||| || ||||||||||||||    
T  19008804 ggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctat 19008719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 20480667 - 20480591
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattt 278  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20480667 ttggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 27172595 - 27172514
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  27172595 ggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgcccc 27172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 20371040 - 20371121
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 286  Q
    ||||||||||||||||  |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  20371040 ggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 20371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 44911488 - 44911406
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctat 44911406  T

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Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 50429656 - 50429741
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| ||||||||||  |||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 50429741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 47498299 - 47498384
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||| ||||    
T  47498299 ttggcttaattgcacttt--ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctat 47498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 49284409 - 49284487
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 49284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 39692054 - 39691969
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||  ||||||||| | |||||||| ||||||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctat 39691969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 50949615 - 50949534
Alignment:
Q  207 taattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| || | ||| |||| |||||||||||||||||||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctat 50949534  T

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Target: chr1; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 49318498 - 49318412
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||||| ||||||||  ||||||||||||||| || |||||||||||||||||||||||||  |||||||    
T  49318498 ttggcttaattgcatttttccccc-tatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctat 49318412  T

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Target: chr1; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 6002235 - 6002315
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||| |||||||| |||||| ||||||||  ||||||||||||||||||||    
T  6002235 ttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 6002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 21687520 - 21687445
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgatttt 279  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 50949159 - 50949237
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgatttt 279  Q
    |||| ||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||| |||| ||||||||||||||    
T  50949159 ttggtttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 32162734 - 32162799
Alignment:
Q  208 aattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagc 273  Q
    |||||||||||| |  ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc 32162799  T

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Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 8109047 - 8108991
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

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Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 50615240 - 50615287
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  50615240 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgatttt 50615287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 50623068 - 50623115
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  50623068 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgatttt 50623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 19007735 - 19007796
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagtttt 265  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||    
T  19007735 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgccccctatagtttt 19007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 44224169 - 44224088
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||| ||||  | |||||| ||||||||| |||||| || |||||||||||||||||||||||||| |||||||    
T  44224169 ttaattgcactttgcccca-tgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctat 44224088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 47955306 - 47955360
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 48190769 - 48190827
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  48190769 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 48190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 4692022 - 4692106
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| | || ||||||||||| |||||| ||||||| || || ||||||| |||||||| ||||||||||||||    
T  4692022 ggcttaattgcacttt-ctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctat 4692106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 6002946 - 6002870
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||  ||||||  |||  ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6002870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 48191409 - 48191353
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||| |||||||  ||||||||| |||||||||| ||||||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccat 48191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 47498547 - 47498493
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 49285081 - 49285031
Alignment:
Q  231 tttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgc 49285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 39690794 - 39690847
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    |||||| |||||||||| ||||||||| || ||||||||||||||||| |||||    
T  39690794 ggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 1176716 - 1176763
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  1176716 tggcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 1176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 41082908 - 41082956
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||||    
T  41082908 tggcttaattgtactttttccccctatcttttgccaattgtgcgatttt 41082956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 13589712 - 13589659
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  13589712 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 47955662 - 47955608
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  |||   |||||||||||||| ||||||    
T  47955662 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 47955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 12498567 - 12498652
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 12498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 26571218 - 26571133
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 21207229 - 21207311
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 21207311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 12498982 - 12498897
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 12498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 3888237 - 3888324
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3888237 ttggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 19514524 - 19514611
Alignment:
Q  202 tggcttaattgcacttttcccc-cctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19514524 tggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 19515017 - 19514932
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctat 19514932  T

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Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 26570729 - 26570814
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26570729 ggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 26570814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 37780320 - 37780404
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  37780320 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctat 37780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 22729492 - 22729409
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22729409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 2817152 - 2817234
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctat 2817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 43463759 - 43463840
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 34147564 - 34147479
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctat 34147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 37610202 - 37610282
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  37610202 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgcccc 37610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 43464245 - 43464161
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  43464245 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 43464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 10098514 - 10098602
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 286  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||||||    
T  10098514 atattggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 37780798 - 37780715
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  37780798 ttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgcccc 37780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 3888713 - 3888631
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 25940521 - 25940606
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||  ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  25940521 ggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 25940606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 25941067 - 25940983
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| |||||||||||  |||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 25940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 2817626 - 2817544
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  2817626 cttaattgcacttttccccc-tatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctat 2817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 18817670 - 18817587
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  18817670 atattggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 37610673 - 37610587
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  37610673 ttggcttaattgtacttt-cccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat 37610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 22729006 - 22729088
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||| |||  ||||||||||||||||||||||||||||    
T  22729006 ttggcttaattgcacttttcccc-ctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc 22729088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 30401880 - 30401967
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||| | |||||||||||||||||| | ||||| || ||||||||||||||| ||||||||||||||||||    
T  30401880 ttggtttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctat 30401967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 10098991 - 10098910
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  10098991 ttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 10098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 34147141 - 34147224
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||   ||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  34147141 ggcttaattgcacttttccct--tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 34147224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 11316717 - 11316799
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||| || || ||| |||||||||||| ||||||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctat 11316799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 11317025 - 11316943
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||  || || || |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctat 11316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 18816952 - 18817030
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 41072264 - 41072183
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||| ||||||||| || ||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||||    
T  41072264 ttaattacacttttcctcc-tatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctat 41072183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 11351478 - 11351405
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgatttt 279  Q
    ||||||||||||||| | |||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 11350808 - 11350885
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgc 11350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 18433013 - 18433071
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  18433013 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 18433071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 42919305 - 42919389
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||| ||||| |||| |||| ||| |||||||||||||||| |||| |||  |||||||||||||||||||| ||||||    
T  42919305 ggcttaattgctctttttcccc-tatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctat 42919389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 16466796 - 16466749
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgatttt 16466749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 25115757 - 25115811
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 25174849 - 25174903
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 26020450 - 26020506
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccat 26020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 34576863 - 34576922
Alignment:
Q  199 tattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||| ||||||||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  34576863 tattggtttaattgcacttt-cccccctatcttttgctaattgtgcgattttacaccccat 34576922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 18433370 - 18433316
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 25116115 - 25116061
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 25175205 - 25175151
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25175151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttg 280  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||| |||| |||  ||||||||||| |||||||    
T  31569910 ttaattgcacttttccccc-tatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 22428934 - 22428989
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||| ||||||||    
T  22428934 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccat 22428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  209 attgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    ||||||||||| ||||||||  |||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 22429249 - 22429194
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||| ||||||||| |||  ||||| |||||||||||||| ||||||||    
T  22429249 ggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccat 22429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 185330 - 185243
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  185330 ttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 185243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 184840 - 184924
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctat 184924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 10087913 - 10087827
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10087913 tggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10087827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 33974354 - 33974268
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33974354 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 33974268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 32734052 - 32733965
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  32734052 ttggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 32733965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 7654602 - 7654517
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctat 7654517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 29074425 - 29074341
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  29074425 ggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29074341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 29079189 - 29079105
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  29079189 ggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 29106998 - 29106914
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  29106998 ggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29106914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 22755142 - 22755058
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||  ||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctat 22755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 22684413 - 22684327
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||||    
T  22684413 ttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 22754655 - 22754741
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||||    
T  22754655 ttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 33828988 - 33829068
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  33828988 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 33829695 - 33829612
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||| |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  33829695 atataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 2354864 - 2354779
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| |||||||  |||||||||| ||||||||||||||| |||||||| |||| |||||||| ||||||||||||||    
T  2354864 ggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctat 2354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 13177109 - 13177029
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||| ||||||||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13177109 ggcttagttgcacttttccccc-tatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgcccc 13177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 2354407 - 2354493
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| |||||||| |||||||||  ||||||| ||||||| || ||||| |||| |||||||||||||| ||||||||    
T  2354407 ttggcttaattgcatttttcccc-ctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctat 2354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 3403715 - 3403773
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  3403715 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 3403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 32733560 - 32733642
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||| |||| ||| |||||||||||||||| | ||||||| || ||||||||||||||||||| |||||||| |||||    
T  32733560 ttaagtgcattttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctat 32733642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 3404043 - 3403989
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 13176639 - 13176704
Alignment:
Q  223 ccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||| |||||||  | |||||  ||||||| |||||||||||||||||||    
T  13176639 ccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctat 13176704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 33973862 - 33973949
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| ||||||| | ||||||| ||||||||||| || ||||||||||||  ||   ||||||||| ||||||||||||| |||||||    
T  33973862 ttggtttaattgtatttttccctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctat 33973949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 18241854 - 18241908
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 18241908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 11656838 - 11656782
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||    
T  11656838 ttggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcacccc 11656782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||| ||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 21032334 - 21032287
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||||||||||||||  ||||  ||||||||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgatttt 21032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 10039676 - 10039729
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||    
T  10039676 ggcttaattgcactttt-ccccctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 13579704 - 13579651
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||||||| ||||||    
T  13579704 ggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 30388060 - 30388108
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||| |||||||||  ||||| ||||||||||||||    
T  30388060 ttggcttaattgcacttt-cccccctatcttttgctaattgtgcgatttt 30388108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18242212 - 18242156
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||| ||||   ||||||  |||||||||||||||||||| ||||||    
T  18242212 ttggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcacccc 18242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 8851151 - 8851233
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 8851636 - 8851551
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 37720204 - 37720285
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 37720285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 7664729 - 7664642
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7664729 ttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 17850976 - 17851062
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17850976 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctat 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 26692876 - 26692789
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26692876 ttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 7664248 - 7664333
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7664248 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 16910826 - 16910912
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  16910826 tggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 16910912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 5378661 - 5378746
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 6325399 - 6325316
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctat 6325316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 6324924 - 6325002
Alignment:
Q  210 ttgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctat 6325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 5380013 - 5379928
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5379928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 17851456 - 17851371
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17851456 ggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 17851371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 41790966 - 41790881
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctat 41790881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 16911321 - 16911238
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 16911238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 5793450 - 5793532
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctat 5793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 18750178 - 18750097
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 286  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 18750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 26692399 - 26692481
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 26692481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 19141903 - 19141818
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  19141903 ttggtttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 19141818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 19141446 - 19141528
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctat 19141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 7979567 - 7979650
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||| ||||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7979567 ggctttattgcacttttccct--tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 2639542 - 2639458
Alignment:
Q  197 gatattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||| |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  2639542 gatataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 2639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 2638820 - 2638898
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 2638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 26841587 - 26841665
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 41790494 - 41790575
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  41790494 ttaattgcatttttcccc-ctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 41790575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 7980056 - 7979972
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| || | |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  7980056 ggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctat 7979972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 26842294 - 26842214
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  26842294 ttggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26842214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 18296077 - 18296154
Alignment:
Q  204 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||| ||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18296154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 7591204 - 7591279
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||| ||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 7591279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 38490895 - 38490817
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||| || | ||| |||||||||||||||||||||    
T  38490895 tggcttaattgcacttt-cctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgc 38490817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 20347518 - 20347464
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 30190923 - 30190977
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 7591906 - 7591826
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||  |||| | |||||  |||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  7591906 ttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 7591826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 11883982 - 11883926
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  11883982 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 18296747 - 18296691
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 18749723 - 18749810
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||| |||||||||||||| | || | ||||||| ||||| || |||||| ||||||||||||||||||||  |||||||||||||||    
T  18749723 attggtttaattgcacttttactcc-tctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctat 18749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 24832331 - 24832387
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccat 24832387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 6171510 - 6171456
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 11883623 - 11883677
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 43495309 - 43495356
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  43495309 ggcttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 26737837 - 26737781
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||| |||||||  ||||| || ||||||||||| ||||||    
T  26737837 ttggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 30191281 - 30191225
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  |||   |||||||||||||| ||||||    
T  30191281 ttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacccc 30191225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 40469780 - 40469729
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||| ||||||||  ||||| |||||||||||||| ||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcacccc 40469729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 43495660 - 43495612
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||||||||    
T  43495660 ttggcttaattgcacttt-cccacctatattttgctaattgtgcgatttt 43495612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 6495775 - 6495723
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    ||||||||||||||||||| ||||||  ||||  |||||||||||||| ||||    
T  6495775 ggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 18055169 - 18055221
Alignment:
Q  206 ttaattgcacttttcccccctatagttt-gccaattgtgcgattttacacccc 257  Q
    |||||||||||||| | ||||||| ||| ||||||||||||||||| ||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcacccc 18055221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 40469425 - 40469481
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||| | ||||||| |||||  ||||| |||||||||||||| ||||||    
T  40469425 ttggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcacccc 40469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 37396708 - 37396793
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37396793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 37397201 - 37397114
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  37397201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctat 37397114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 41662521 - 41662606
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 41662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 6199150 - 6199065
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  6199150 ggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 6199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 17431287 - 17431372
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  17431287 ggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctat 17431372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 24473822 - 24473737
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 24473737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 34498119 - 34498207
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  34498119 attggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctat 34498207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 9623500 - 9623587
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  9623500 ttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 9623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 24473341 - 24473428
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  24473341 ttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctat 24473428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 20861692 - 20861607
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20861692 ggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctat 20861607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 34498609 - 34498524
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| || |||| ||||||||||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctat 34498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 15444698 - 15444616
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 15444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 25438794 - 25438856
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 25439176 - 25439095
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  25439176 ttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 25439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 6198658 - 6198743
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||| ||| ||| || | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  6198658 ggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 6198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 39724104 - 39724024
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  39724104 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 39724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 15444213 - 15444296
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| |||||||| |||||||||||||||||| | ||||||||  |||||||||||||||||||||||||| ||||||    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctat 15444296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 9823415 - 9823337
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9823337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 13027337 - 13027257
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  13027337 ttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 16169172 - 16169258
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||  || ||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||| ||||||||    
T  16169172 ttggcttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 16169258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 16169663 - 16169576
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||||||| |||||||||||  ||||||||| | ||| || |  |||||||||||||||||||||||||||||||    
T  16169663 ttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 16169576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 13026635 - 13026713
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||| |||| |||  ||||||||||||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgc 13026713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 13936723 - 13936800
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  13936723 ggcttaattgcacttttccccc-tatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 13936800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 33727156 - 33727074
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||| |||||||| ||  |||||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  33727156 ttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctat 33727074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 2856526 - 2856611
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||  |||||||  |||||||    
T  2856526 ggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctat 2856611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 9822746 - 9822826
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||  ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  9822746 ttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 22851388 - 22851468
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| |||||||  |||| ||||||||||||||| ||||||||  |||||||| |||||||||||    
T  22851388 ttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgc 22851468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 15442765 - 15442848
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||| |||||||||||||| || |||||||||| |||||| ||||||||  ||||||||| |||||||||| ||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctat 15442848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 13937443 - 13937365
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||||||||||||||||  |||| ||||||||||| ||| ||||||||  ||||||||||| ||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgc 13937365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 3307336 - 3307416
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||| ||||| |||||||  |||| ||||||||||||||| || |||||| |||||||| |||||||||||    
T  3307336 ttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgc 3307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 37752080 - 37752140
Alignment:
Q  199 tattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  37752080 tattggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccat 37752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 41662459 - 41662403
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  41662459 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 41662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 765730 - 765788
Alignment:
Q  199 tattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  765730 tattgacttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 23123336 - 23123394
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccat 259  Q
    |||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||    
T  23123336 ttggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccat 23123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 3464003 - 3463946
Alignment:
Q  199 tattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccc 256  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||    
T  3464003 tattggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 12281124 - 12281176
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 15156241 - 15156185
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||    
T  15156241 ttggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 15042148 - 15042223
Alignment:
Q  206 ttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    ||||||||||||| ||||| |||  ||||||||||||| |||||| ||||| || |||||||| ||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgc 15042223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 16929299 - 16929242
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  16929299 attggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacccc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 33726696 - 33726741
Alignment:
Q  205 cttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgatttt 33726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 37752472 - 37752416
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  37752472 ttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 37752416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 9623936 - 9623864
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc--atagttttaaacgagc 273  Q
    |||||||||||||||||||  || |||||||||||||| ||| |||||| ||||||  ||||||||||||||||    
T  9623936 tggcttaattgcacttttcatcc-tatagtttgccaatcgtgtgattttgcaccccatatagttttaaacgagc 9623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 15155883 - 15155937
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 15155937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 16928942 - 16928996
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||| ||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 39723430 - 39723480
Alignment:
Q  231 tttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| || |||||  ||||||||||||||||||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgc 39723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 43246230 - 43246176
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||| ||||||| |||||| ||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacccc 43246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 43245868 - 43245925
Alignment:
Q  200 attggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||| ||||||||  ||||  |||||||||||||| ||||||    
T  43245868 attggcttaattgcactttttccccctatcttttgataattgtgcgattttgcacccc 43245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 12281482 - 12281426
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||||||| |||  ||||  |||||||||||||| ||||||    
T  12281482 ttggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 12281426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 43162232 - 43162285
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    ||||||||||||||||||| ||||||||| ||||  |||||||||||||| ||||    
T  43162232 ttggcttaattgcactttt-ccccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 330 - 415
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  330 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 818 - 736
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgcccc 284  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  818 ttggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgcccc 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 9905 - 9991
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttaca-ccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctat 9991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 10371 - 10311
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagtttt 265  Q
    |||||||| ||||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||    
T  10371 ggcttaatagcacttttcccc--tatagtttgccaattgtccgattttgcaccctatagtttt 10311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 38749 - 38664
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctat 38664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  236 caattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctat 38336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 19621 - 19705
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19621 ggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 20102 - 20012
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 288  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||   ||||||||||||||||    
T  20102 atataggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctat 20012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 50562 - 50475
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttaca-ccccatagttttaaacgagcgattttgccccctat 288  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  50562 ttggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 50475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 50075 - 50156
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 286  Q
    ||||||||||||||||  |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  50075 ggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 6150 - 6230
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||||||||||| || ||||  ||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  6150 ttggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgc 6230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 6849 - 6771
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgc 281  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 1476 - 1420
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  1476 ttggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 1116 - 1172
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||| ||||||||  ||||  |||||||||||||| ||||||    
T  1116 ttggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcacccc 1172  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 438928 - 438984
Alignment:
Q  201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  438928 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

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Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 183716 - 183670
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 249  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

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Target: scaffold0319 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 6394 - 6448
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 6448  T

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Target: scaffold0319; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 6751 - 6697
Alignment:
Q  202 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  6751 tggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 6697  T

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Target: scaffold0192 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 25423 - 25369
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

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Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 45860 - 45807
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacccc 257  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  45860 ggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 45807  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 10012 - 10059
Alignment:
Q  203 ggcttaattgcacttttcccccctatagtttgccaattgtgcgatttt 250  Q
    ||||||||||||||||| ||||||||  |||||||||||| |||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgatttt 10059  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 17214 - 17158
Alignment:
Q  198 atattggcttaattgcacttttcccccctatagtttgccaattgtgcgattttacacc 255  Q
    ||||||||||||||||||||||| |||||||  ||||| |||||||| ||||| ||||    
T  17214 atattggcttaattgcacttttc-cccctatcttttgctaattgtgcaattttgcacc 17158  T

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