View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17083_low_40 (Length: 261)
Name: NF17083_low_40
Description: NF17083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17083_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 23 - 248
Target Start/End: Original strand, 38195145 - 38195379
Alignment:
| Q |
23 |
gagattatttgaagagtccacttgttgaagcacatttattcaagtcaagcatttacaatggttcatattccaaacatagagatttgaagcacattt---- |
118 |
Q |
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| T |
38195145 |
gagattatttgaagagtccacttgttgaagcacatttattcaagtcaagcatttacaatggttcatattccaaacaaagagatttgaagcacatttattc |
38195244 |
T |
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| Q |
119 |
-----attcacaatttgttgatccccatagggtaaccatttttcgtgaccaaaatcagaatcaacaagtcaagcatttccaaatttaaaccgatgatgag |
213 |
Q |
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| T |
38195245 |
aatttattcacaatttgttgatccccatagtgtaaccattttacgtgaccaaaatcagaatcaacaagtcaagcatttccaaatttaaaccgatgatgag |
38195344 |
T |
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| Q |
214 |
ctcttctatatcacatttcggccattcatattctt |
248 |
Q |
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| T |
38195345 |
ctcttctatatcacaattcggccattcatattctt |
38195379 |
T |
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