View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17083_low_48 (Length: 238)
Name: NF17083_low_48
Description: NF17083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17083_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 47212886 - 47212804
Alignment:
| Q |
147 |
aagcttgcttgtttggcgaatccgaaaacaacaactcttgaaacatcatacaacaaagttcatgaaggaaggtatattcttcg |
229 |
Q |
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| T |
47212886 |
aagcttgcttgtttggcgaatccgaaaacaacaactcttgaaacatcatacaacaaagttcatgaaggaaggtatattattcg |
47212804 |
T |
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