View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17083_low_7 (Length: 536)

Name: NF17083_low_7
Description: NF17083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17083_low_7
NF17083_low_7
[»] chr7 (44 HSPs)
chr7 (151-515)||(8659198-8659562)
chr7 (154-506)||(8654294-8654646)
chr7 (149-386)||(10494341-10494578)
chr7 (149-386)||(8667383-8667620)
chr7 (149-387)||(13333423-13333661)
chr7 (151-386)||(1301424-1301659)
chr7 (25-116)||(1301740-1301831)
chr7 (149-293)||(8585673-8585817)
chr7 (15-116)||(8659639-8659740)
chr7 (149-273)||(8628609-8628733)
chr7 (154-293)||(8636315-8636454)
chr7 (16-119)||(8667692-8667795)
chr7 (16-119)||(13333248-13333351)
chr7 (19-119)||(8654723-8654823)
chr7 (16-119)||(8647150-8647253)
chr7 (16-119)||(10494166-10494269)
chr7 (25-104)||(8585507-8585586)
chr7 (16-119)||(8671422-8671525)
chr7 (29-104)||(17268227-17268302)
chr7 (17-119)||(8382669-8382771)
chr7 (19-104)||(17260529-17260614)
chr7 (25-104)||(8628820-8628899)
chr7 (29-119)||(8636148-8636238)
chr7 (16-102)||(8640339-8640425)
chr7 (149-323)||(27830842-27831016)
chr7 (149-301)||(17260290-17260442)
chr7 (152-299)||(8382846-8382993)
chr7 (152-275)||(8590713-8590836)
chr7 (16-119)||(8602247-8602350)
chr7 (53-119)||(8559606-8559672)
chr7 (152-286)||(29581811-29581945)
chr7 (450-515)||(1301295-1301360)
chr7 (16-104)||(7877525-7877613)
chr7 (235-286)||(3147328-3147379)
chr7 (29-104)||(6789800-6789875)
chr7 (152-299)||(8545684-8545831)
chr7 (464-503)||(8585988-8586027)
chr7 (464-503)||(27831157-27831196)
chr7 (152-287)||(29577642-29577777)
chr7 (443-501)||(3147113-3147171)
chr7 (66-119)||(8576599-8576652)
chr7 (154-287)||(8602037-8602170)
chr7 (16-96)||(8590934-8591014)
chr7 (149-293)||(17267996-17268140)
[»] chr1 (5 HSPs)
chr1 (149-503)||(4678525-4678878)
chr1 (15-119)||(4678349-4678453)
chr1 (151-299)||(34466762-34466910)
chr1 (149-286)||(15595098-15595235)
chr1 (25-104)||(15595329-15595408)
[»] chr2 (14 HSPs)
chr2 (149-515)||(16657484-16657850)
chr2 (149-287)||(16661959-16662097)
chr2 (149-287)||(14703471-14703609)
chr2 (16-109)||(16657309-16657402)
chr2 (149-299)||(12258548-12258698)
chr2 (223-299)||(7542277-7542353)
chr2 (25-101)||(16661793-16661869)
chr2 (16-104)||(43625700-43625788)
chr2 (149-299)||(12245373-12245523)
chr2 (220-286)||(43625476-43625542)
chr2 (16-104)||(12234977-12235065)
chr2 (25-104)||(7542514-7542593)
chr2 (16-107)||(17716485-17716576)
chr2 (16-96)||(11999690-11999770)
[»] chr4 (7 HSPs)
chr4 (149-379)||(9335858-9336088)
chr4 (16-119)||(9335683-9335786)
chr4 (149-293)||(30775309-30775453)
chr4 (149-299)||(35132499-35132649)
chr4 (464-503)||(30775099-30775138)
chr4 (16-95)||(35132745-35132824)
chr4 (31-104)||(30775540-30775613)
[»] chr5 (3 HSPs)
chr5 (464-515)||(28219753-28219804)
chr5 (223-322)||(28219946-28220045)
chr5 (16-104)||(28220239-28220327)
[»] chr8 (1 HSPs)
chr8 (16-119)||(43745122-43745223)


Alignment Details
Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 151 - 515
Target Start/End: Complemental strand, 8659562 - 8659198
Alignment:
Q  151 gtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggg 250  Q
    |||||||||||||||||||||||||| || ||||||||| | ||||| || ||||||| ||||||||||||||||||| |||| ||||| |||||||| |    
T  8659562 gtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggag 8659463  T
Q  251 gagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggaggtt 350  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    ||| | | ||| |||||||||||    
T  8659462 gagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggtt 8659363  T
Q  351 gagagatgcgtgtgaaagggcaaagaggacactctccgaggaatatgtcgcctttgttgaggtagagtttttattcaaggatatagactttatttcacca 450  Q
    ||||  ||| ||||| ||||||||||||||||||||    |  | |||| ||  ||||||||| || | ||||||  |||  ||||||||   ||||  |    
T  8659362 gagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagacttctgttcatta 8659263  T
Q  451 atcacttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgtatcaaaacggttga 515  Q
    |||||| || ||  |||||||||||| |||||||| ||||| ||||||||||| ||||| |||||    
T  8659262 atcactcgtgccaggtttgaggaaatgaatatggatctttttaatgagtgtatgaaaactgttga 8659198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 154 - 506
Target Start/End: Complemental strand, 8654646 - 8654294
Alignment:
Q  154 tttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggggag 253  Q
    ||||||||||||||||||||||| || ||||||||  |||||||||| ||||||| |||||| ||||||||||||||||| ||||| ||||| |||||||    
T  8654646 tttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggag 8654547  T
Q  254 aagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggaggttgag 353  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||   ||| | | ||| ||||||||||||||    
T  8654546 aagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgag 8654447  T
Q  354 agatgcgtgtgaaagggcaaagaggacactctccgaggaatatgtcgcctttgttgaggtagagtttttattcaaggatatagactttatttcaccaatc 453  Q
    |  ||| ||||| |||||||| |||| ||||||       | |||| ||  ||||||||||||   |||||| | ||  || ||||||  |||| |||||    
T  8654446 aactgcctgtgagagggcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatc 8654347  T
Q  454 acttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgtatcaa 506  Q
    ||| || |  | ||||||||||||||||||||| |||||||||||||||||||    
T  8654346 actcgtgctaaatttgaggaaattaatatggactttttcaatgagtgtatcaa 8654294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 149 - 386
Target Start/End: Original strand, 10494341 - 10494578
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    ||||||||||||| |||||||||||||| || ||||||||| |||||||||| ||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  10494341 ttgtctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgg 10494440  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
    |||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||  ||||| |||||||| ||   |||  | | ||| |||||||||    
T  10494441 gggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggagg 10494540  T
Q  349 ttgagagatgcgtgtgaaagggcaaagaggacactctc 386  Q
    ||||||  ||| ||||| |||||||| |||| ||||||    
T  10494541 ttgagaactgcctgtgagagggcaaaaaggatactctc 10494578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 149 - 386
Target Start/End: Complemental strand, 8667620 - 8667383
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    ||||||||||||| ||||| || ||||| || ||||||||| |||||||||| ||||||| ||||||||| ||||||||||| || ||||| ||||||||    
T  8667620 ttgtctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgg 8667521  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
    ||| || |||||||||| ||||||||||||||| ||||| |||||||| |||||||  |||||||||||||| ||  ||||| | | ||| |||||||||    
T  8667520 gggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatccttaaggagg 8667421  T
Q  349 ttgagagatgcgtgtgaaagggcaaagaggacactctc 386  Q
    ||||||  ||| ||||| |||||||| |||| ||||||    
T  8667420 ttgagaactgcctgtgagagggcaaaaaggatactctc 8667383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 149 - 387
Target Start/End: Original strand, 13333423 - 13333661
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    ||||||||||||| |||||||||||||| || ||||||||| | |||||||  ||||||| |||||||||||||||||| || || ||||| ||||||||    
T  13333423 ttgtctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgg 13333522  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  ||||| || || || ||   |||| | | ||| |||||||||    
T  13333523 gggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatccttaaggagg 13333622  T
Q  349 ttgagagatgcgtgtgaaagggcaaagaggacactctcc 387  Q
    ||||||  ||| ||||| |||| ||| |||| |||||||    
T  13333623 ttgagaactgcctgtgagagggaaaaaaggatactctcc 13333661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 151 - 386
Target Start/End: Complemental strand, 1301659 - 1301424
Alignment:
Q  151 gtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggg 250  Q
    |||||||| ||||| ||||||||||| || ||||||||| | || || || || |||| |||||||||||||||||||| ||| || || |||||||| |    
T  1301659 gtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggag 1301560  T
Q  251 gagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggaggtt 350  Q
    |||| ||||| ||||  |||||||||| |||||||||||||||||||| |||||  |||||||||||||||||    |||  || ||| |||||||||||    
T  1301559 gagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtggtaaccagaaatccttaaggaggtt 1301460  T
Q  351 gagagatgcgtgtgaaagggcaaagaggacactctc 386  Q
    ||||  ||||||||| |||||||| |||||||||||    
T  1301459 gagaattgcgtgtgagagggcaaaaaggacactctc 1301424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 1301831 - 1301740
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataat 116  Q
    |||||||||||||||||| | |||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1301831 gttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtcattcagataat 1301740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 293
Target Start/End: Original strand, 8585673 - 8585817
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||| ||||||||||||||||| ||||| || |||||| || |||||||||| ||||||| ||||||||| ||||| || ||||| || || ||||||||    
T  8585673 ttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatactcaccttgg 8585772  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagagga 293  Q
    |||||  ||||| |||| ||||||| ||||||||||||| |||||    
T  8585773 gggaggggactttgataacagaatgttgaactactttgttgagga 8585817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 8659740 - 8659639
Alignment:
Q  15 gaagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagata 114  Q
    ||||||||  |||||||| ||||||||||| |||||  |||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  8659740 gaagaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagata 8659641  T
Q  115 at 116  Q
    ||    
T  8659640 at 8659639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 8628733 - 8628609
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||| ||||||||||||||||| ||||| || |||||| || |||||||||| ||||||| ||||||||| |||||||||||||| || || ||||||||    
T  8628733 ttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatactcaccttgg 8628634  T
Q  249 gggagaagacttcgataccagaatg 273  Q
     ||||| ||||| |||| |||||||    
T  8628633 tggagaggactttgataacagaatg 8628609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 8636315 - 8636454
Alignment:
Q  154 tttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggggag 253  Q
    |||||||||||||||||||| || |||||||||||  ||| |||||| ||||| | ||||||||| ||||||||||| ||  |||| |||||||| ||||    
T  8636315 tttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggag 8636414  T
Q  254 aagacttcgataccagaatggtgaactactttgtagagga 293  Q
    | ||||| |||| |||||||||| | || |||||||||||    
T  8636415 aggactttgataacagaatggtggaatattttgtagagga 8636454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 8667795 - 8667692
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    ||||||| ||||||||||||||| || ||||||||  |||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||| |||||    
T  8667795 aagaatgccgttgttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataa 8667696  T
Q  116 tcaa 119  Q
    ||||    
T  8667695 tcaa 8667692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 13333248 - 13333351
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    ||||||| ||||||||||||||| || ||||||||  |||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||  ||||    
T  13333248 aagaatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaataa 13333347  T
Q  116 tcaa 119  Q
    ||||    
T  13333348 tcaa 13333351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 8654823 - 8654723
Alignment:
Q  19 aatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataatca 118  Q
    |||||||||||||||||||| |||||||||||  | |||||| ||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||| |||    
T  8654823 aatgtcgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaacgtcattcggatactca 8654724  T
Q  119 a 119  Q
    |    
T  8654723 a 8654723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 8647253 - 8647150
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    |||||||  ||||||||||||||||||||||||||  ||| |||| |||||||||| |||||||| || || ||||||||||||||| |||| | |||||    
T  8647253 aagaatgcagttgttactgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataa 8647154  T
Q  116 tcaa 119  Q
    ||||    
T  8647153 tcaa 8647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 10494166 - 10494269
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    |||||||  |||||||||||||| || ||||||||| |||||||  |||| || || || ||||||||||| |||||||||||||||||||||| |||||    
T  10494166 aagaatgctgttgttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataa 10494265  T
Q  116 tcaa 119  Q
    ||||    
T  10494266 tcaa 10494269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 8585507 - 8585586
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||| ||||||||||| || |||||  |||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  8585507 gttgtgactgtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgt 8585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 8671422 - 8671525
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    ||||||| ||||||||| ||||| || ||||||||  |||||||| |||  |||||||| ||||||||| | |||||||| ||||||||||||| |||||    
T  8671422 aagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataa 8671521  T
Q  116 tcaa 119  Q
    ||||    
T  8671522 tcaa 8671525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 17268302 - 17268227
Alignment:
Q  29 ttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||||| || || ||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  17268302 ttactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgt 17268227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 8382669 - 8382771
Alignment:
Q  17 agaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataat 116  Q
    ||||||| |||||||| ||||||||||| |||||  |||||||  | |||||||| | |||||||||||| ||||||||||| ||||| || | ||||||    
T  8382669 agaatgtagttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataat 8382768  T
Q  117 caa 119  Q
    |||    
T  8382769 caa 8382771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 17260614 - 17260529
Alignment:
Q  19 aatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||| ||| ||||||| ||||| || |||||  |||||||| ||||||||||||||||||||||||  |||||||||||| ||||    
T  17260614 aatgttgttattactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgt 17260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 8628899 - 8628820
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||| || |||||||| || |||||  |||||||| |||||||||||||  |||||||||| |||||||||||||||||    
T  8628899 gttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgt 8628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 8636148 - 8636238
Alignment:
Q  29 ttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataatcaa 119  Q
    |||||||||| || || |||||  |||||||| | ||| |||||| |||||||||||| ||||| ||||||||||| |||| |||||||||    
T  8636148 ttactgtgcccgcttatttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaa 8636238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 8640339 - 8640425
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaat 102  Q
    |||||||  ||||||||| ||||||| ||||||||  ||| ||||  |||||||||||||||||| || || |||||||||||||||    
T  8640339 aagaatgcagttgttactatgcctgcttacttcaatgattatcagcaaaaagccaccatagatgccggggccattgctggccttaat 8640425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 323
Target Start/End: Original strand, 27830842 - 27831016
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||| ||||| ||||||||||| ||||| || |||||| | || |||||||| | | | | |||  |||| || || |||||||| ||||| ||||||||    
T  27830842 ttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacactcaccttgg 27830941  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattag 323  Q
     ||||| ||||| ||||  || ||||||||||| ||||| |||| |||||| ||||  || | ||||||||||||    
T  27830942 tggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattag 27831016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 301
Target Start/End: Complemental strand, 17260442 - 17260290
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||| |||||||| || ||||| || |||||| |||| |||||||| | | | | ||| ||||| || ||||| | |||  |||| || |||||    
T  17260442 ttgtctttgaccttggtggggggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgg 17260343  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaa 301  Q
    ||| || ||||| ||||  ||||||||| |||| |||||||||||| ||||||    
T  17260342 gggtgaggactttgataatagaatggtgtactattttgtagaggagatcaaaa 17260290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 8382846 - 8382993
Alignment:
Q  152 tctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttggggg 251  Q
    ||||||||||||||||||| ||||| || |||||| || ||||||||||   | ||| |||||  || || |||||||| ||  |||| || || || ||    
T  8382846 tctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggagg 8382945  T
Q  252 agaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
     |||||||| |||| |||||| ||||| |||||||| || ||||||||    
T  8382946 tgaagacttagataacagaatcgtgaagtactttgttgacgagttcaa 8382993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 8590836 - 8590713
Alignment:
Q  152 tctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttggggg 251  Q
    ||||||||||||||||||| ||||| || |||||| |  ||||| | || ||||||  |||||| |||||||||||| | ||  | |||||||| || ||    
T  8590836 tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg 8590737  T
Q  252 agaagacttcgataccagaatggt 275  Q
    ||| ||||| |||| |||||||||    
T  8590736 agaggactttgataacagaatggt 8590713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 8602350 - 8602247
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    |||||||  |||||||||||||| || || || ||  |||||||| |||||||||| | |||||||||||| |||||||| || ||||| || | |||||    
T  8602350 aagaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgcggataa 8602251  T
Q  116 tcaa 119  Q
    ||||    
T  8602250 tcaa 8602247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 8559672 - 8559606
Alignment:
Q  53 attctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataatcaa 119  Q
    ||||||| |||| |||||||| |||||| |||| ||||||||| |||||||| || |||||||||||    
T  8559672 attctcaaagaagagccaccaaagatgcaggtgaaattgctggtcttaatgtaatgcagataatcaa 8559606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 286
Target Start/End: Original strand, 29581811 - 29581945
Alignment:
Q  152 tctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttggggg 251  Q
    ||||||||||||||||||| ||||| || |||||| |  ||||| | || | |||| | |||||||| || |||||||||||  | || ||||| || ||    
T  29581811 tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggagg 29581910  T
Q  252 agaagacttcgataccagaatggtgaactactttg 286  Q
    ||| ||||| |||| | |||||||||| |||||||    
T  29581911 agaggactttgataaccgaatggtgaattactttg 29581945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 515
Target Start/End: Complemental strand, 1301360 - 1301295
Alignment:
Q  450 aatcacttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgtatcaaaacggttga 515  Q
    ||||||| || || |||||||||||||||||||||| ||||| ||||||||||  ||||| |||||    
T  1301360 aatcactcgtgccaagtttgaggaaattaatatggatctttttaatgagtgtacaaaaaccgttga 1301295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 7877525 - 7877613
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    |||||||  |||||||||||||| || || |||||  |||||||  |||||||||| | ||||||||||||| |||| ||||| |||||    
T  7877525 aagaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgt 7877613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 3147379 - 3147328
Alignment:
Q  235 aacacccaccttgggggagaagacttcgataccagaatggtgaactactttg 286  Q
    |||||||||||||||||||| ||||| ||||  || ||||||||||||||||    
T  3147379 aacacccaccttgggggagaggactttgataataggatggtgaactactttg 3147328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 6789875 - 6789800
Alignment:
Q  29 ttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||||||||||| || |||||  |||||||  | ||||||||  ||||||||||||| |||||||| ||||||||    
T  6789875 ttactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgt 6789800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 299
Target Start/End: Complemental strand, 8545831 - 8545684
Alignment:
Q  152 tctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttggggg 251  Q
    ||||||| ||||| ||||| ||||| || ||||||||  | ||||||||   | | | |||||| || || |||||||||||  ||||  |||| || ||    
T  8545831 tctttgaccttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcgg 8545732  T
Q  252 agaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
     |||||||| |||| |||||||||||| ||||||||  ||||||||||    
T  8545731 tgaagactttgataacagaatggtgaattactttgtgaaggagttcaa 8545684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 503
Target Start/End: Original strand, 8585988 - 8586027
Alignment:
Q  464 agtttgaggaaattaatatggaccttttcaatgagtgtat 503  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  8585988 agtttgaggaaatcaatatggacctttttaatgagtgtat 8586027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 503
Target Start/End: Original strand, 27831157 - 27831196
Alignment:
Q  464 agtttgaggaaattaatatggaccttttcaatgagtgtat 503  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  27831157 agtttgaggaaatcaatatggaccttttcaatgaatgtat 27831196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 287
Target Start/End: Original strand, 29577642 - 29577777
Alignment:
Q  152 tctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttggggg 251  Q
    ||||||||||||||||||| || || || |||||| |  ||||| |||| | ||||   ||||||||||| |||||||||||  | || ||||| || ||    
T  29577642 tctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggagg 29577741  T
Q  252 agaagacttcgataccagaatggtgaactactttgt 287  Q
    ||| ||||||||||  | |||||||| | |||||||    
T  29577742 agaggacttcgataataaaatggtgagccactttgt 29577777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 501
Target Start/End: Complemental strand, 3147171 - 3147113
Alignment:
Q  443 tttcaccaatcacttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgt 501  Q
    ||||| |||||||| || || ||||||||||||| |||||||| ||||||| |||||||    
T  3147171 tttcatcaatcactcgtgccaagtttgaggaaatcaatatggatcttttcactgagtgt 3147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 8576652 - 8576599
Alignment:
Q  66 agccaccatagatgctggtgcaattgctggccttaatgtcattcagataatcaa 119  Q
    |||||| | |||||| |||||||||||||| || |||||||| |||||||||||    
T  8576652 agccactaaagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaa 8576599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 8602170 - 8602037
Alignment:
Q  154 tttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggggag 253  Q
    ||||||||||||||||| ||||| || || ||| |  ||||||||||   | ||  ||||||||| || |||||| | ||  |||| |||||||| ||||    
T  8602170 tttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttggaggag 8602071  T
Q  254 aagacttcgataccagaatggtgaactactttgt 287  Q
    | ||||| |||| | ||||||||||| |||||||    
T  8602070 aggactttgataaccgaatggtgaaccactttgt 8602037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 8591014 - 8590934
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggc 96  Q
    |||||||  |||||||||||||| || || || ||  |||||||||| ||||| |||| |||||||||||  |||||||||    
T  8591014 aagaatgcagttgttactgtgccagcttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggc 8590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 293
Target Start/End: Complemental strand, 17268140 - 17267996
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||| ||||||||||| ||||| || |||||| |||| |||||||| | | | | ||| ||||| || ||||| | |||  |||| || |||||    
T  17268140 ttgtctttgaccttggtggtgggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgg 17268041  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagagga 293  Q
    ||| || ||||| ||||  ||||||||  |||| ||||| |||||    
T  17268040 gggtgaggactttgataatagaatggtatactattttgttgagga 17267996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 149 - 503
Target Start/End: Original strand, 4678525 - 4678878
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||| ||||||||||||||||| || ||||||||| | | ||| || |||| || |||||||||||||||||||||||| ||||| ||||| ||    
T  4678525 ttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctagg 4678624  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
     ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| | | | |||||||||    
T  4678625 tggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttaaggagg 4678724  T
Q  349 ttgagagatgcgtgtgaaagggcaaagaggacactctccgaggaatatgtcgcctttgttgaggtagagtttttattcaaggatatagactttatttcac 448  Q
    ||||||  ||| || || ||||||||||||||||||||    |  | |||| ||  |||||| ||||| | ||||||  |||  |||||||||  ||||     
T  4678725 ttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga-gtagattctttatttcagggaatagacttttcttcat 4678823  T
Q  449 caatcacttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgtat 503  Q
    | || ||| || || ||||||||||||||||||||||||||||||| ||||||||    
T  4678824 ctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtat 4678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 4678349 - 4678453
Alignment:
Q  15 gaagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagata 114  Q
    ||||||||||||||||||||||||||||||||||||  |||||||  ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||    
T  4678349 gaagaatgtcgttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattcaaata 4678448  T
Q  115 atcaa 119  Q
    |||||    
T  4678449 atcaa 4678453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 299
Target Start/End: Original strand, 34466762 - 34466910
Alignment:
Q  151 gtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgggg 250  Q
    |||||||| ||||||||||| ||||| || |||||| || | |||||||| | | ||| ||||||||| || |||||| |||| ||||| ||||| ||      
T  34466762 gtctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggac 34466861  T
Q  251 gagaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
    |||| ||||| ||||  ||||||| |||| |||||| | ||||||||||    
T  34466862 gagaggactttgataatagaatggcgaaccactttgcaaaggagttcaa 34466910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 286
Target Start/End: Complemental strand, 15595235 - 15595098
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||||||||||||||| ||||| || ||||||||| | |||||||| |   | | |||  |||| || ||||| |  || ||||| ||||||||    
T  15595235 ttgtctttgatcttggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaacactcaccttgg 15595136  T
Q  249 gggagaagacttcgataccagaatggtgaactactttg 286  Q
     ||||| ||||| |||| ||||||||| ||||||||||    
T  15595135 aggagaggactttgataacagaatggtcaactactttg 15595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 15595408 - 15595329
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    |||||||| |||||||| ||  ||||  |||||||  |||||||||| |||||||| ||||| |||||||||||||||||    
T  15595408 gttgttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgt 15595329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 149 - 515
Target Start/End: Original strand, 16657484 - 16657850
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||  ||||| |||||||||||||| || ||||| ||||||||    
T  16657484 ttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgg 16657583  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
    |||||| ||||| |||| ||||| ||||||||||||||||||||||||  ||||||  ||||| |||||||| ||   |||| | | | | || ||||||    
T  16657584 gggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagccttgaggagg 16657683  T
Q  349 ttgagagatgcgtgtgaaagggcaaagaggacactctccgaggaatatgtcgcctttgttgaggtagagtttttattcaaggatatagactttatttcac 448  Q
    ||||||  ||| ||||| ||||||||||||||||||||    |  | |||| ||  |||||||||||| | ||||||  |||  || ||||||  ||||     
T  16657684 ttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttatttcagggaattgacttttcttcat 16657783  T
Q  449 caatcacttgtaccgagtttgaggaaattaatatggaccttttcaatgagtgtatcaaaacggttga 515  Q
    |||||||  || || |||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  16657784 caatcacccgtgccaagtttgaggaaattaatatggatcttttcaatgagtgtatgaaaactgttga 16657850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 149 - 287
Target Start/End: Original strand, 16661959 - 16662097
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||||||||||||||| ||||| || |||||| || |||||||||| ||||||| ||||||||| ||||||||| |||| ||||| ||||| ||    
T  16661959 ttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgg 16662058  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgt 287  Q
    |||||| ||||| |||| ||||||| |||||||||||||    
T  16662059 gggagaggactttgataacagaatgttgaactactttgt 16662097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 14703609 - 14703471
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||||||||||||||||||||| ||||||||| || | |||||||| ||    | |||  || | || || |||||||| ||||| ||||| ||    
T  14703609 ttgtctttgatcttggtggtggtacttttgacgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactcacctcgg 14703510  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgt 287  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  14703509 gggagaggacttcgataacagaatggtgaactactttgt 14703471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 16657309 - 16657402
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattc 109  Q
    |||||||  |||||||||||||| || ||||||||  |||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  16657309 aagaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattc 16657402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 12258548 - 12258698
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||||||||||||||| ||||| || |||||| |  | || ||||| | | ||| |||| |||| || || || ||||| ||||| ||||||||    
T  12258548 ttgtctttgatcttggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgcaccttgg 12258647  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
     ||||| ||||| ||||  ||||||||||  ||||||||||| ||||||||    
T  12258648 aggagaggactttgataatagaatggtgagttactttgtagaagagttcaa 12258698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 7542353 - 7542277
Alignment:
Q  223 gccactgctgggaacacccaccttgggggagaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
    ||||||||||| ||||| |||||||| ||||||||||| ||||  ||||||| ||||||||||||| | ||||||||    
T  7542353 gccactgctggcaacactcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaa 7542277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 16661793 - 16661869
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaa 101  Q
    ||||| ||||| ||||| || || ||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  16661793 gttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaa 16661869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 43625788 - 43625700
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    |||||||  |||||||| |||||||| ||||||||  |||||||| |||||||||||||||||| |||||  ||||  |||||||||||    
T  43625788 aagaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcattgtcggccttaatgt 43625700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 12245373 - 12245523
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||| ||||||||||||||||| ||||| ||||| |||||| | || ||||| | | |   |||  |||| || ||||||||||| ||||| ||||||||    
T  12245373 ttgtgtttgatcttggtggtggcacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcaccttgg 12245472  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
     ||||| || || ||||  |||||||| |||||||||| | ||||||||||    
T  12245473 aggagaggattttgataatagaatggtaaactactttgcacaggagttcaa 12245523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 43625542 - 43625476
Alignment:
Q  220 aaagccactgctgggaacacccaccttgggggagaagacttcgataccagaatggtgaactactttg 286  Q
    |||||||||||||| ||||| |||||||| ||||| ||||| |||   |||||||||||||||||||    
T  43625542 aaagccactgctggaaacactcaccttggaggagaggactttgatgatagaatggtgaactactttg 43625476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 12235065 - 12234977
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    |||||||  |||||||| |||||||| || |||||  |||||||  ||||||| || |||||||||||||  ||||||||||| |||||    
T  12235065 aagaatgcagttgttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgt 12234977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 7542593 - 7542514
Alignment:
Q  25 gttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||||||||| ||||| || || ||  |||||||  |||||||||| |||||||| ||||| ||||||||||| |||||    
T  7542593 gttgttactgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgt 7542514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 17716485 - 17716576
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcat 107  Q
    ||||||| |||||||||||| ||||| ||||| || | |||||||||| |||| || |   |||||||||| |||||||| |||||| ||||    
T  17716485 aagaatgccgttgttactgtccctgcttactttaatttttctcagagacaagctactaagcatgctggtgctattgctggtcttaatttcat 17716576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 11999770 - 11999690
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggc 96  Q
    |||||||| ||||||||||| || || || || |   |||||||  |||||||||| |||||||| |||||||||||||||    
T  11999770 aagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggc 11999690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 149 - 379
Target Start/End: Original strand, 9335858 - 9336088
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    ||||||||||||| ||||| |||||||| || ||||||||| |||||||||| ||||||   ||||||||||||||||| || || ||||| ||||||||    
T  9335858 ttgtctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttgg 9335957  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacattagcaagaacgcgatatcattaaggagg 348  Q
     || || ||||| |||| ||||||||| ||||| ||||| || ||||| |||||||  |||||||||||||| |   ||||| | | ||| |||||||||    
T  9335958 aggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagcagaacccaaaatccttaaggagg 9336057  T
Q  349 ttgagagatgcgtgtgaaagggcaaagagga 379  Q
    ||||||  ||| ||||| |||||||| ||||    
T  9336058 ttgagaactgcctgtgagagggcaaaaagga 9336088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 9335683 - 9335786
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    ||||||| ||||||||| ||||| || ||||||||  |||||||| |||| |||||||||||||||||| | |||||||||||||||||||||| |||||    
T  9335683 aagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataa 9335782  T
Q  116 tcaa 119  Q
    ||||    
T  9335783 tcaa 9335786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 149 - 293
Target Start/End: Complemental strand, 30775453 - 30775309
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    |||||||||||||||||||||| ||||| || |||||| |  |||| ||||  | |||||  |||||||| ||||| |||||||| ||||| ||| | ||    
T  30775453 ttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacactcacatcgg 30775354  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagagga 293  Q
    |||||| ||||| |||| ||||||| |||| ||||||||||||||    
T  30775353 gggagaggactttgataacagaatgttgaattactttgtagagga 30775309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 35132649 - 35132499
Alignment:
Q  149 ttgtctttgatcttggtggtggtactttggacgtgtctatcgtcacaattaacggtgatgactttgaagtaaaagccactgctgggaacacccaccttgg 248  Q
    ||||||| |||||||||||||| ||||| || || || ||  | || ||||| | | ||| |||  |||| || |||||||| || ||||| || || ||    
T  35132649 ttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaacactcatctcgg 35132550  T
Q  249 gggagaagacttcgataccagaatggtgaactactttgtagaggagttcaa 299  Q
     ||||| ||||| |||| |||||||||||||||||||||| | ||||||||    
T  35132549 tggagaggactttgataacagaatggtgaactactttgtacaagagttcaa 35132499  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 503
Target Start/End: Complemental strand, 30775138 - 30775099
Alignment:
Q  464 agtttgaggaaattaatatggaccttttcaatgagtgtat 503  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  30775138 agtttgaggaaatcaatatggacctttttaatgagtgtat 30775099  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 35132824 - 35132745
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctgg 95  Q
    |||||||  ||||||||||||||||| || || |   |||||||  |||||||||| |||||||||||||| ||||||||    
T  35132824 aagaatgcagttgttactgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctgg 35132745  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 30775613 - 30775540
Alignment:
Q  31 actgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    ||||||||||| || |||||  || | ||| |||||||||| || ||||||||||| |||||||| ||||||||    
T  30775613 actgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgt 30775540  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 28219804 - 28219753
Alignment:
Q  464 agtttgaggaaattaatatggaccttttcaatgagtgtatcaaaacggttga 515  Q
    ||||||||||||| |||||||| ||||||||||||||| | ||||| |||||    
T  28219804 agtttgaggaaatcaatatggatcttttcaatgagtgtttgaaaactgttga 28219753  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 28220045 - 28219946
Alignment:
Q  223 gccactgctgggaacacccaccttgggggagaagacttcgataccagaatggtgaactactttgtagaggagttcaaaaagagtaataaagtggacatta 322  Q
    ||||| ||||| ||||| ||||| |||||||| ||||| ||||  || |||||||||||||| | ||||||||| || ||||  || || ||||||||||    
T  28220045 gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta 28219946  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 28220327 - 28220239
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgt 104  Q
    |||||||  ||| ||||||||||||| || |||||  ||| |||| | ||||||||||||||||| ||| | |||||||| || |||||    
T  28220327 aagaatgcagttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgt 28220239  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 43745223 - 43745122
Alignment:
Q  16 aagaatgtcgttgttactgtgcctgcatacttcaactattctcagagaaaagccaccatagatgctggtgcaattgctggccttaatgtcattcagataa 115  Q
    |||||||  |||||||||||||| || || |||||  ||| |||| | ||||||||  ||||||||||||| |||||||| ||| |||| ||  ||||||    
T  43745223 aagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataa 43745126  T
Q  116 tcaa 119  Q
    ||||    
T  43745125 tcaa 43745122  T

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