View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17084_high_19 (Length: 283)
Name: NF17084_high_19
Description: NF17084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17084_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 26211441 - 26211628
Alignment:
| Q |
1 |
attgaataggaacgtgaatgagaatgtttctttttgaggttgtnnnnnnnnnnnnnncgttgcataaaagaatgaacatggtttggtaaaggttaatgtt |
100 |
Q |
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| T |
26211441 |
attgaataggaacgtgaatgagaatgtttctttttgaggttgttatatatata----cgttgcataaaagaatgaacatggtttggtaaaggttaatgtt |
26211536 |
T |
|
| Q |
101 |
ttgtgttttgaggaagaaaaagaagcattaaataaacatgatgttgtagaggaggttaaagttaaaggtaaagatgattaaacaaccgacca |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26211537 |
ttgtgttttgaggaagaaaaagaagcattaaataaacatgatgttgtagaggaggttaaagttaaaggtaaagatgattaaacaaccgacca |
26211628 |
T |
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