View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17084_low_12 (Length: 385)
Name: NF17084_low_12
Description: NF17084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17084_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 1 - 385
Target Start/End: Complemental strand, 47813917 - 47813534
Alignment:
| Q |
1 |
ataccgaatgattcacctttatttttattatgccaattcgcaccaccaaaatggatctcaaattctgtacacaaacctgaaaccaagaataattaactta |
100 |
Q |
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| T |
47813917 |
ataccgaatgattcacctttatttttattatgccaattcgcaccaccaaaatggatctcaaattctgtacacaaacctgaaaccaagaataattaactta |
47813818 |
T |
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| Q |
101 |
tataaaagagaaatagaaatctcctaaatttccacttcctcatgatggttgacctgatttaatgaatacatcgtaccaaaattccatttcttcactaatc |
200 |
Q |
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| T |
47813817 |
tataaa-gagaaatagaaatctcctaaatttccacttcctcatgatggttgacctgatttaatgaatacatcgtaccaaaattcaatttcttcactaatc |
47813719 |
T |
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| Q |
201 |
tgacttgaaccatgatggtccatattttctcctaaagtatcacaagaggttgcattgtaaaatcctgaccctacagtgtttggatccttgcttgagacta |
300 |
Q |
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| T |
47813718 |
tgacttgaaccatgatggtccatattttctcctaaagtatcacaagaggttgcattgtaaaatcctgaccctacagtgtttggatccttgcttgagacta |
47813619 |
T |
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| Q |
301 |
aaccataattggaaataactcttttttcaccgacactactataaccatcacttgcttgtgcctcatccaaagtatatgaataaga |
385 |
Q |
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| T |
47813618 |
aaccataattggaaataactcttttttcaccgacactactataaccatcacttgcttgtgcctcatccaaagtatatgaataaga |
47813534 |
T |
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