View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17085_low_2 (Length: 343)

Name: NF17085_low_2
Description: NF17085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17085_low_2
NF17085_low_2
[»] chr8 (54 HSPs)
chr8 (190-343)||(12670247-12670400)
chr8 (190-343)||(30454094-30454247)
chr8 (193-343)||(2626502-2626657)
chr8 (192-343)||(36720779-36720932)
chr8 (191-343)||(28817624-28817778)
chr8 (193-343)||(13160685-13160836)
chr8 (193-343)||(17823559-17823711)
chr8 (193-343)||(29521685-29521837)
chr8 (189-343)||(35261662-35261818)
chr8 (194-343)||(45071248-45071398)
chr8 (192-343)||(39460993-39461148)
chr8 (216-343)||(20869523-20869648)
chr8 (190-343)||(7136524-7136681)
chr8 (191-343)||(18164758-18164911)
chr8 (190-343)||(8897761-8897916)
chr8 (190-343)||(6760805-6760962)
chr8 (192-343)||(26954115-26954271)
chr8 (192-339)||(44530136-44530285)
chr8 (192-343)||(12625872-12626026)
chr8 (192-343)||(31457156-31457308)
chr8 (199-343)||(20284075-20284225)
chr8 (191-343)||(25250505-25250661)
chr8 (199-343)||(21070703-21070854)
chr8 (192-305)||(19729363-19729476)
chr8 (195-309)||(29877111-29877227)
chr8 (206-343)||(44781517-44781658)
chr8 (191-318)||(5135288-5135416)
chr8 (215-343)||(24365081-24365212)
chr8 (190-267)||(26102578-26102655)
chr8 (190-308)||(20869941-20870063)
chr8 (205-317)||(8483950-8484064)
chr8 (205-327)||(389642-389768)
chr8 (193-283)||(16225064-16225156)
chr8 (285-343)||(28407399-28407457)
chr8 (207-343)||(42083712-42083851)
chr8 (215-343)||(24245434-24245562)
chr8 (261-343)||(11748282-11748366)
chr8 (237-340)||(23000263-23000365)
chr8 (202-343)||(22598140-22598282)
chr8 (205-317)||(5689640-5689754)
chr8 (191-309)||(10857845-10857966)
chr8 (285-343)||(30962867-30962925)
chr8 (285-343)||(35105906-35105964)
chr8 (191-256)||(16013528-16013593)
chr8 (215-343)||(14017990-14018121)
chr8 (92-176)||(20241863-20241947)
chr8 (92-176)||(20251120-20251204)
chr8 (192-256)||(35107310-35107374)
chr8 (246-300)||(23286378-23286432)
chr8 (193-258)||(28407473-28407538)
chr8 (190-242)||(27468089-27468141)
chr8 (193-235)||(23286337-23286379)
chr8 (1-37)||(20242063-20242099)
chr8 (1-37)||(20250968-20251004)
[»] chr7 (78 HSPs)
chr7 (190-343)||(42391097-42391250)
chr7 (192-343)||(21172008-21172159)
chr7 (190-343)||(32758244-32758397)
chr7 (193-343)||(10693073-10693223)
chr7 (197-343)||(33871914-33872061)
chr7 (193-343)||(48735122-48735273)
chr7 (194-343)||(42476856-42477005)
chr7 (194-343)||(11741778-11741927)
chr7 (190-343)||(19426887-19427041)
chr7 (191-343)||(42805507-42805663)
chr7 (190-343)||(47077852-47078005)
chr7 (194-343)||(11617589-11617740)
chr7 (191-343)||(42798652-42798806)
chr7 (193-343)||(2541019-2541172)
chr7 (192-329)||(31591108-31591245)
chr7 (193-343)||(47716442-47716596)
chr7 (191-343)||(27629617-27629771)
chr7 (190-343)||(34626205-34626359)
chr7 (193-343)||(22698967-22699122)
chr7 (205-316)||(2662948-2663058)
chr7 (195-343)||(35334818-35334966)
chr7 (190-343)||(43557455-43557613)
chr7 (190-318)||(7879646-7879776)
chr7 (215-343)||(19266433-19266563)
chr7 (190-343)||(19265798-19265951)
chr7 (190-343)||(32233132-32233286)
chr7 (215-343)||(13805085-13805214)
chr7 (193-339)||(23419674-23419822)
chr7 (192-343)||(40463860-40464012)
chr7 (194-337)||(29907408-29907552)
chr7 (215-343)||(28362167-28362297)
chr7 (237-343)||(14099050-14099158)
chr7 (237-343)||(14409067-14409175)
chr7 (195-327)||(18512455-18512588)
chr7 (217-343)||(48123508-48123636)
chr7 (194-340)||(18747472-18747621)
chr7 (222-343)||(46354177-46354302)
chr7 (61-192)||(11828629-11828756)
chr7 (189-272)||(27889312-27889395)
chr7 (63-184)||(6530526-6530647)
chr7 (238-343)||(7644939-7645047)
chr7 (215-307)||(38604546-38604639)
chr7 (190-335)||(38262193-38262340)
chr7 (194-343)||(3469176-3469331)
chr7 (205-316)||(21566445-21566559)
chr7 (285-343)||(7193068-7193126)
chr7 (61-183)||(21813745-21813867)
chr7 (289-343)||(42495933-42495987)
chr7 (285-339)||(44123715-44123769)
chr7 (254-343)||(5180218-5180309)
chr7 (248-343)||(6736873-6736969)
chr7 (233-343)||(8148985-8149098)
chr7 (285-343)||(7794600-7794658)
chr7 (285-343)||(18327017-18327075)
chr7 (192-301)||(35787268-35787378)
chr7 (192-343)||(39123873-39124031)
chr7 (223-315)||(15108427-15108520)
chr7 (215-343)||(28078154-28078283)
chr7 (229-314)||(1408469-1408556)
chr7 (205-343)||(14732833-14732974)
chr7 (238-328)||(35203437-35203531)
chr7 (92-176)||(44338186-44338270)
chr7 (193-253)||(45018923-45018983)
chr7 (5-60)||(11828638-11828693)
chr7 (189-256)||(45811919-45811985)
chr7 (194-328)||(16341276-16341413)
chr7 (190-240)||(36602535-36602585)
chr7 (254-343)||(12473287-12473378)
chr7 (205-310)||(23231573-23231680)
chr7 (1-40)||(21813823-21813862)
chr7 (208-315)||(42101899-42102009)
chr7 (104-163)||(46963921-46963980)
chr7 (190-256)||(25198798-25198864)
chr7 (191-268)||(23618975-23619052)
chr7 (1-73)||(6530567-6530644)
chr7 (205-272)||(36267829-36267897)
chr7 (196-248)||(42495865-42495917)
chr7 (1-37)||(44338386-44338422)
[»] chr6 (42 HSPs)
chr6 (190-343)||(1346947-1347100)
chr6 (192-343)||(1354756-1354907)
chr6 (191-343)||(29355853-29356009)
chr6 (191-308)||(26097178-26097295)
chr6 (189-343)||(2166406-2166564)
chr6 (189-343)||(2178039-2178197)
chr6 (192-343)||(12221913-12222069)
chr6 (190-343)||(9161106-9161262)
chr6 (191-308)||(25557743-25557860)
chr6 (192-343)||(28007609-28007761)
chr6 (200-316)||(32579436-32579553)
chr6 (200-343)||(3815084-3815229)
chr6 (92-189)||(21861937-21862034)
chr6 (206-340)||(23240837-23240971)
chr6 (190-341)||(18277190-18277343)
chr6 (190-343)||(1941838-1941993)
chr6 (191-255)||(6808468-6808532)
chr6 (189-339)||(24097568-24097716)
chr6 (192-343)||(32728156-32728308)
chr6 (260-343)||(8409226-8409311)
chr6 (285-343)||(14975174-14975232)
chr6 (190-255)||(12892082-12892147)
chr6 (193-333)||(7947371-7947514)
chr6 (192-256)||(12885985-12886049)
chr6 (205-318)||(33138841-33138956)
chr6 (192-271)||(23930126-23930205)
chr6 (191-265)||(13267788-13267862)
chr6 (248-343)||(13905034-13905131)
chr6 (215-343)||(14553495-14553626)
chr6 (193-270)||(383760-383837)
chr6 (206-343)||(15866052-15866189)
chr6 (255-343)||(6024216-6024306)
chr6 (264-343)||(20400650-20400731)
chr6 (190-331)||(3116126-3116263)
chr6 (145-181)||(13167330-13167366)
chr6 (191-227)||(25997750-25997786)
chr6 (194-343)||(2755422-2755576)
chr6 (289-343)||(12063450-12063504)
chr6 (193-343)||(12889409-12889562)
chr6 (190-244)||(20906783-20906837)
chr6 (285-334)||(17432332-17432381)
chr6 (151-192)||(28063812-28063853)
[»] scaffold0168 (1 HSPs)
scaffold0168 (191-343)||(30562-30714)
[»] chr5 (57 HSPs)
chr5 (192-339)||(32703411-32703558)
chr5 (190-343)||(35710296-35710449)
chr5 (191-343)||(8169982-8170134)
chr5 (192-343)||(41014302-41014454)
chr5 (192-343)||(38879564-38879719)
chr5 (190-343)||(24448873-24449028)
chr5 (196-311)||(7368413-7368528)
chr5 (192-343)||(4619103-4619258)
chr5 (7-192)||(11335393-11335572)
chr5 (191-343)||(43334185-43334341)
chr5 (193-343)||(1565414-1565566)
chr5 (263-343)||(37024626-37024706)
chr5 (192-343)||(22861668-22861818)
chr5 (192-343)||(28516432-28516586)
chr5 (193-317)||(13801767-13801895)
chr5 (215-343)||(27328735-27328867)
chr5 (193-282)||(34154814-34154903)
chr5 (215-343)||(22600437-22600567)
chr5 (215-315)||(24323727-24323829)
chr5 (215-315)||(24360351-24360453)
chr5 (189-343)||(1405170-1405326)
chr5 (190-316)||(19142940-19143067)
chr5 (216-343)||(2838761-2838890)
chr5 (205-315)||(43574617-43574729)
chr5 (194-343)||(12006329-12006482)
chr5 (192-268)||(16957374-16957450)
chr5 (193-343)||(22187268-22187422)
chr5 (193-302)||(7097760-7097870)
chr5 (190-252)||(16028621-16028683)
chr5 (193-301)||(16880647-16880757)
chr5 (194-307)||(20135623-20135740)
chr5 (205-342)||(1850624-1850762)
chr5 (285-343)||(23974763-23974821)
chr5 (205-343)||(208939-209079)
chr5 (193-252)||(30877564-30877623)
chr5 (61-183)||(9511703-9511825)
chr5 (205-283)||(9794390-9794468)
chr5 (233-341)||(22907904-22908014)
chr5 (194-235)||(19438759-19438800)
chr5 (197-343)||(30006308-30006456)
chr5 (192-244)||(32354211-32354263)
chr5 (296-343)||(17419897-17419944)
chr5 (92-163)||(24136719-24136790)
chr5 (285-331)||(22025538-22025584)
chr5 (193-255)||(25622533-25622595)
chr5 (192-306)||(29334415-29334532)
chr5 (205-334)||(42924842-42924977)
chr5 (1-74)||(9511742-9511820)
chr5 (286-343)||(39301106-39301163)
chr5 (192-253)||(39801591-39801652)
chr5 (204-256)||(4654426-4654478)
chr5 (205-273)||(13774920-13774988)
chr5 (233-318)||(41425956-41426043)
chr5 (1-39)||(9511813-9511851)
chr5 (285-343)||(34074656-34074714)
chr5 (195-227)||(11462926-11462958)
chr5 (260-343)||(31299615-31299699)
[»] chr1 (84 HSPs)
chr1 (192-343)||(34725097-34725248)
chr1 (189-343)||(38478278-38478432)
chr1 (190-343)||(47214517-47214670)
chr1 (192-343)||(32632556-32632708)
chr1 (191-335)||(35253185-35253329)
chr1 (190-343)||(45812534-45812687)
chr1 (189-343)||(46247949-46248105)
chr1 (192-343)||(19414445-19414596)
chr1 (192-343)||(14617044-14617197)
chr1 (192-343)||(20004089-20004244)
chr1 (192-343)||(12126836-12126987)
chr1 (192-343)||(30395725-30395880)
chr1 (189-343)||(46991810-46991966)
chr1 (190-343)||(18944649-18944807)
chr1 (207-343)||(23768334-23768472)
chr1 (190-343)||(45402101-45402257)
chr1 (187-343)||(27201653-27201813)
chr1 (190-343)||(18724543-18724697)
chr1 (192-335)||(10668239-10668386)
chr1 (190-343)||(6925106-6925261)
chr1 (192-343)||(27474287-27474439)
chr1 (192-343)||(41319805-41319958)
chr1 (214-343)||(25468284-25468415)
chr1 (190-308)||(31382211-31382330)
chr1 (192-333)||(35005139-35005284)
chr1 (215-339)||(11596523-11596648)
chr1 (192-343)||(6983810-6983961)
chr1 (193-283)||(4349706-4349796)
chr1 (205-343)||(35117777-35117920)
chr1 (190-343)||(8197049-8197204)
chr1 (190-307)||(23796507-23796626)
chr1 (229-343)||(20036226-20036343)
chr1 (205-343)||(2435798-2435939)
chr1 (285-343)||(22327105-22327163)
chr1 (196-343)||(10378738-10378877)
chr1 (191-343)||(18741955-18742113)
chr1 (229-343)||(22930105-22930219)
chr1 (190-272)||(1517308-1517390)
chr1 (192-343)||(9939467-9939623)
chr1 (190-256)||(50606498-50606564)
chr1 (190-343)||(19701576-19701732)
chr1 (247-343)||(4430080-4430178)
chr1 (215-343)||(44485131-44485261)
chr1 (195-317)||(22324925-22325049)
chr1 (205-315)||(45264411-45264524)
chr1 (190-283)||(43768207-43768300)
chr1 (215-283)||(15505632-15505700)
chr1 (254-343)||(17470407-17470498)
chr1 (203-270)||(4249453-4249520)
chr1 (203-270)||(4249777-4249844)
chr1 (203-270)||(4250101-4250168)
chr1 (195-343)||(19932755-19932904)
chr1 (246-343)||(33222990-33223089)
chr1 (286-341)||(50760321-50760376)
chr1 (285-343)||(2435987-2436045)
chr1 (190-343)||(35019236-35019390)
chr1 (196-340)||(39214961-39215108)
chr1 (1-40)||(15630069-15630108)
chr1 (192-243)||(19386575-19386626)
chr1 (205-315)||(27136663-27136776)
chr1 (285-339)||(31272468-31272522)
chr1 (191-343)||(50811945-50812100)
chr1 (250-343)||(52910223-52910319)
chr1 (285-343)||(25290169-25290229)
chr1 (191-256)||(42304205-42304270)
chr1 (207-316)||(43207528-43207640)
chr1 (96-168)||(2072458-2072530)
chr1 (198-258)||(4587568-4587628)
chr1 (206-258)||(33594144-33594196)
chr1 (284-343)||(21723670-21723728)
chr1 (196-271)||(28894561-28894636)
chr1 (207-307)||(34148974-34149076)
chr1 (1-51)||(2072394-2072444)
chr1 (202-272)||(4430008-4430078)
chr1 (1-51)||(19825111-19825161)
chr1 (297-343)||(34714629-34714675)
chr1 (297-339)||(43768168-43768210)
chr1 (191-244)||(16120823-16120876)
chr1 (215-309)||(20169111-20169207)
chr1 (215-319)||(30682844-30682948)
chr1 (200-315)||(31442396-31442515)
chr1 (204-279)||(7074588-7074664)
chr1 (192-272)||(20999849-20999929)
chr1 (250-339)||(24564354-24564445)
[»] chr4 (84 HSPs)
chr4 (190-343)||(47528527-47528680)
chr4 (191-343)||(48598823-48598975)
chr4 (193-343)||(20224967-20225117)
chr4 (190-343)||(11054145-11054298)
chr4 (191-343)||(9832311-9832463)
chr4 (195-334)||(29207900-29208039)
chr4 (191-343)||(5648242-5648395)
chr4 (190-343)||(17043392-17043546)
chr4 (190-343)||(16408598-16408755)
chr4 (194-343)||(6430627-6430777)
chr4 (190-343)||(30639363-30639517)
chr4 (190-343)||(39077793-39077946)
chr4 (194-343)||(8473621-8473772)
chr4 (194-343)||(40915812-40915962)
chr4 (190-339)||(5306657-5306811)
chr4 (196-343)||(21646947-21647098)
chr4 (190-327)||(47443956-47444095)
chr4 (191-343)||(54175046-54175202)
chr4 (190-343)||(23501776-23501927)
chr4 (191-340)||(25463108-25463258)
chr4 (193-343)||(44363130-44363284)
chr4 (190-309)||(20639655-20639777)
chr4 (192-343)||(16911545-16911700)
chr4 (205-343)||(19027831-19027971)
chr4 (193-341)||(30690176-30690333)
chr4 (189-343)||(35567153-35567309)
chr4 (191-318)||(10277755-10277882)
chr4 (232-343)||(41018833-41018945)
chr4 (216-343)||(7385499-7385628)
chr4 (191-306)||(25629069-25629186)
chr4 (190-264)||(38786673-38786747)
chr4 (215-343)||(49938615-49938742)
chr4 (192-343)||(14983817-14983970)
chr4 (190-314)||(9987831-9987957)
chr4 (205-343)||(30496334-30496472)
chr4 (191-343)||(13256397-13256549)
chr4 (193-283)||(20225119-20225211)
chr4 (194-308)||(7909281-7909397)
chr4 (190-343)||(10660387-10660544)
chr4 (190-343)||(10874532-10874689)
chr4 (190-254)||(32484307-32484371)
chr4 (215-306)||(49796818-49796910)
chr4 (190-257)||(28494222-28494289)
chr4 (207-343)||(37494834-37494972)
chr4 (246-343)||(14590820-14590920)
chr4 (190-343)||(20908633-20908790)
chr4 (285-343)||(42164242-42164300)
chr4 (205-343)||(54730232-54730375)
chr4 (286-343)||(487230-487287)
chr4 (229-343)||(47441566-47441682)
chr4 (192-302)||(51865037-51865149)
chr4 (206-314)||(21489099-21489210)
chr4 (190-343)||(30352577-30352743)
chr4 (193-343)||(32478792-32478937)
chr4 (215-343)||(54967004-54967133)
chr4 (285-343)||(17315392-17315450)
chr4 (193-303)||(20405109-20405224)
chr4 (193-255)||(38755908-38755970)
chr4 (285-343)||(43035231-43035289)
chr4 (1-154)||(54147571-54147725)
chr4 (285-343)||(54640433-54640491)
chr4 (190-255)||(33836484-33836549)
chr4 (190-343)||(39029059-39029213)
chr4 (193-257)||(11394923-11394987)
chr4 (193-257)||(11404650-11404714)
chr4 (289-341)||(32629366-32629418)
chr4 (190-272)||(36816381-36816464)
chr4 (192-338)||(7038041-7038188)
chr4 (285-343)||(23580302-23580360)
chr4 (209-317)||(30581481-30581593)
chr4 (190-243)||(35532077-35532130)
chr4 (193-254)||(40553937-40553998)
chr4 (193-254)||(44718641-44718702)
chr4 (191-244)||(56322984-56323037)
chr4 (254-343)||(25343170-25343261)
chr4 (193-343)||(55766466-55766618)
chr4 (193-343)||(55830721-55830873)
chr4 (194-281)||(12711450-12711537)
chr4 (104-163)||(16870561-16870620)
chr4 (285-316)||(36589753-36589784)
chr4 (193-255)||(25388249-25388311)
chr4 (215-343)||(3580862-3580988)
chr4 (190-255)||(8820581-8820646)
chr4 (2-55)||(24225498-24225551)
[»] chr3 (69 HSPs)
chr3 (194-343)||(22122918-22123067)
chr3 (191-343)||(1217095-1217247)
chr3 (193-343)||(39203521-39203671)
chr3 (193-318)||(31592879-31593004)
chr3 (192-343)||(13628789-13628944)
chr3 (189-343)||(40272808-40272964)
chr3 (190-343)||(13730599-13730756)
chr3 (194-343)||(22609771-22609921)
chr3 (190-343)||(26869712-26869866)
chr3 (189-299)||(15797271-15797381)
chr3 (190-343)||(7942995-7943150)
chr3 (190-343)||(26573132-26573287)
chr3 (190-343)||(46421031-46421189)
chr3 (190-343)||(52926216-52926362)
chr3 (192-343)||(12914034-12914187)
chr3 (191-340)||(516417-516571)
chr3 (194-343)||(7696893-7697037)
chr3 (192-343)||(29366719-29366874)
chr3 (190-343)||(8247683-8247841)
chr3 (192-343)||(16735446-16735598)
chr3 (191-343)||(34420641-34420796)
chr3 (205-343)||(6411834-6411973)
chr3 (193-318)||(10795423-10795552)
chr3 (191-290)||(34771362-34771461)
chr3 (191-308)||(54484730-54484850)
chr3 (191-298)||(26292382-26292489)
chr3 (193-316)||(14986989-14987116)
chr3 (191-343)||(5173717-5173872)
chr3 (191-343)||(53996563-53996718)
chr3 (189-333)||(54374341-54374488)
chr3 (210-343)||(9607208-9607345)
chr3 (209-337)||(33926094-33926224)
chr3 (189-305)||(49013469-49013589)
chr3 (190-343)||(25944474-25944630)
chr3 (215-340)||(30928169-30928296)
chr3 (189-268)||(24577917-24577996)
chr3 (285-343)||(10870045-10870103)
chr3 (246-343)||(45620881-45620981)
chr3 (246-343)||(4495717-4495816)
chr3 (194-309)||(31904857-31904975)
chr3 (190-341)||(12525414-12525567)
chr3 (205-343)||(45948850-45948993)
chr3 (205-343)||(19731007-19731147)
chr3 (192-253)||(30452892-30452953)
chr3 (190-258)||(24851298-24851366)
chr3 (192-307)||(25517169-25517287)
chr3 (188-302)||(45786209-45786327)
chr3 (195-283)||(353351-353441)
chr3 (189-268)||(24578007-24578086)
chr3 (232-337)||(45139515-45139624)
chr3 (228-302)||(47624088-47624163)
chr3 (246-337)||(54032612-54032705)
chr3 (269-343)||(53062043-53062119)
chr3 (215-342)||(8410889-8411016)
chr3 (194-343)||(33235535-33235687)
chr3 (1-192)||(50295443-50295631)
chr3 (193-306)||(31831241-31831343)
chr3 (239-335)||(39212003-39212101)
chr3 (285-343)||(35417921-35417979)
chr3 (190-235)||(6242282-6242327)
chr3 (248-329)||(52428532-52428616)
chr3 (239-316)||(55401208-55401288)
chr3 (207-315)||(43114882-43114994)
chr3 (190-241)||(47624208-47624259)
chr3 (1-39)||(42530741-42530779)
chr3 (189-226)||(4495672-4495709)
chr3 (218-317)||(9276289-9276395)
chr3 (192-244)||(10484615-10484667)
chr3 (190-226)||(40390365-40390401)
[»] chr2 (68 HSPs)
chr2 (192-343)||(21779260-21779411)
chr2 (193-343)||(23397749-23397899)
chr2 (192-343)||(9671163-9671315)
chr2 (192-343)||(8455315-8455468)
chr2 (190-335)||(14444720-14444866)
chr2 (190-343)||(25249735-25249889)
chr2 (193-343)||(10543681-10543835)
chr2 (190-335)||(10546153-10546301)
chr2 (193-343)||(14530301-14530455)
chr2 (192-343)||(11514419-11514571)
chr2 (192-343)||(24200622-24200777)
chr2 (229-343)||(12023955-12024070)
chr2 (189-343)||(19977710-19977866)
chr2 (209-343)||(99281-99415)
chr2 (188-343)||(17667985-17668142)
chr2 (190-310)||(36871509-36871629)
chr2 (202-329)||(32781298-32781426)
chr2 (191-343)||(27573604-27573757)
chr2 (190-343)||(7214517-7214674)
chr2 (228-343)||(22371040-22371154)
chr2 (188-343)||(17623547-17623704)
chr2 (192-343)||(5841011-5841166)
chr2 (1-188)||(1173577-1173765)
chr2 (193-343)||(25079717-25079870)
chr2 (193-343)||(14544046-14544201)
chr2 (190-343)||(24859985-24860138)
chr2 (190-311)||(30826052-30826173)
chr2 (191-343)||(17896242-17896397)
chr2 (190-341)||(25641487-25641639)
chr2 (192-343)||(39914305-39914458)
chr2 (215-343)||(21377095-21377225)
chr2 (238-343)||(5450268-5450376)
chr2 (215-343)||(33795268-33795398)
chr2 (191-343)||(31158437-31158593)
chr2 (192-337)||(44643511-44643659)
chr2 (193-343)||(40416871-40417023)
chr2 (193-306)||(40762234-40762349)
chr2 (190-317)||(15296403-15296533)
chr2 (215-343)||(17380259-17380388)
chr2 (261-337)||(19614981-19615059)
chr2 (193-272)||(25632565-25632644)
chr2 (196-343)||(4516354-4516503)
chr2 (285-343)||(17705478-17705536)
chr2 (285-343)||(44604837-44604895)
chr2 (231-333)||(23145736-23145840)
chr2 (231-333)||(23557526-23557630)
chr2 (192-253)||(34080176-34080237)
chr2 (194-254)||(40579750-40579810)
chr2 (190-254)||(41409936-41410000)
chr2 (194-315)||(13245096-13245210)
chr2 (1-52)||(38584196-38584247)
chr2 (185-258)||(4794872-4794945)
chr2 (285-343)||(29419983-29420041)
chr2 (190-244)||(39189501-39189555)
chr2 (192-256)||(23488555-23488619)
chr2 (189-253)||(34766330-34766394)
chr2 (92-179)||(38584256-38584344)
chr2 (193-244)||(8575979-8576030)
chr2 (104-163)||(8986123-8986182)
chr2 (215-343)||(44521395-44521525)
chr2 (205-316)||(17471558-17471673)
chr2 (192-241)||(22371199-22371248)
chr2 (215-311)||(30864439-30864536)
chr2 (206-263)||(31523296-31523353)
chr2 (203-272)||(39499240-39499309)
chr2 (249-332)||(2003592-2003678)
chr2 (7-47)||(32290558-32290598)
chr2 (61-121)||(32290584-32290644)
[»] scaffold0187 (2 HSPs)
scaffold0187 (195-343)||(10052-10200)
scaffold0187 (195-343)||(20380-20528)
[»] scaffold0223 (1 HSPs)
scaffold0223 (193-335)||(11122-11264)
[»] scaffold0015 (1 HSPs)
scaffold0015 (192-317)||(48633-48758)
[»] scaffold0258 (1 HSPs)
scaffold0258 (191-343)||(13022-13175)
[»] scaffold0049 (1 HSPs)
scaffold0049 (193-340)||(58963-59114)
[»] scaffold1176 (1 HSPs)
scaffold1176 (197-343)||(1591-1737)
[»] scaffold0057 (4 HSPs)
scaffold0057 (190-343)||(46814-46969)
scaffold0057 (190-343)||(24769-24919)
scaffold0057 (192-313)||(43672-43794)
scaffold0057 (188-256)||(46702-46770)
[»] scaffold0311 (1 HSPs)
scaffold0311 (192-343)||(10793-10946)
[»] scaffold0180 (1 HSPs)
scaffold0180 (190-272)||(24130-24212)
[»] scaffold0254 (1 HSPs)
scaffold0254 (224-343)||(4140-4264)
[»] scaffold0036 (1 HSPs)
scaffold0036 (246-340)||(35070-35167)
[»] scaffold0018 (1 HSPs)
scaffold0018 (193-318)||(72867-72995)
[»] scaffold0005 (1 HSPs)
scaffold0005 (246-343)||(226458-226558)
[»] scaffold0167 (1 HSPs)
scaffold0167 (215-335)||(23590-23712)
[»] scaffold0024 (1 HSPs)
scaffold0024 (298-343)||(83858-83903)
[»] scaffold0954 (1 HSPs)
scaffold0954 (205-310)||(3560-3667)
[»] scaffold0194 (2 HSPs)
scaffold0194 (295-343)||(24647-24695)
scaffold0194 (190-280)||(24696-24786)
[»] scaffold0031 (1 HSPs)
scaffold0031 (285-340)||(43115-43170)
[»] scaffold0116 (1 HSPs)
scaffold0116 (285-343)||(8874-8932)
[»] scaffold0050 (1 HSPs)
scaffold0050 (193-255)||(58630-58691)


Alignment Details
Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 12670247 - 12670400
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||    
T  12670247 aaaaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 12670346  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  12670347 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 12670400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 30454094 - 30454247
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||||||| | |||| ||| |||||    
T  30454094 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttaca 30454193  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 30454247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 2626657 - 2626502
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-----tatta 287  Q
    ||||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||     | |||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgttttttttta 2626558  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  2626557 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 2626502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 36720932 - 36720779
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||||||||| ||||||||| |||| |||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||  | |||||    
T  36720932 aaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 36720833  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  36720832 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 36720779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 28817624 - 28817778
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattac 288  Q
    ||||||||||||| | ||||||| ||||||||||||  ||||||| |||||||| |||||||||| || ||||||||||||| | |||||||  | ||||    
T  28817624 aaaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttac 28817723  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  28817724 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 28817778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 13160836 - 13160685
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacaca 291  Q
    ||||||||||| || |||||  ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | ||||||| | |||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 13160737  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| ||||||||||||||  ||||| |||||||||||||||||    
T  13160736 agaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaa 13160685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 17823711 - 17823559
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    ||||||||||| ||||||||| |||||| |||||| ||||||  |||||||| | ||||||||||| ||||| ||||||||| || ||||  | ||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacac 17823612  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  17823611 aagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 17823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 29521685 - 29521837
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    |||| |||||| ||||||||| ||||||||||||  |||||||||||| ||| ||||||||||||| ||||||||||||| | |||||||  | ||| ||    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaac 29521784  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| ||||||||    
T  29521785 aagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaa 29521837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 35261818 - 35261662
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||  ||||||| ||||||||||||| ||||||||||||  | |||||||  | ||    
T  35261818 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttt 35261719  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| ||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  35261718 acacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaa 35261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 45071398 - 45071248
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaa 292  Q
    |||||||||| ||||||||  ||||||||||||  || |||| |||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 45071299  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||| |||||||||||  ||||| || ||||||||||||||    
T  45071298 gaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaa 45071248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 39460993 - 39461148
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| || |||||||  ||| ||||||||||||| | ||| |||| ||  |    
T  39460993 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgtttttta 39461092  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  39461093 cacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaa 39461148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 343
Target Start/End: Original strand, 20869523 - 20869648
Alignment:
Q  216 gctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttccaggacttgaac 315  Q
    |||||||||||| ||||||| |||||||| || ||||  |||| ||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaac 20869620  T
Q  316 ccgcaacctttcagtcacatgacaacaa 343  Q
    |||  |||||||||||||||||||||||    
T  20869621 ccgtgacctttcagtcacatgacaacaa 20869648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 7136524 - 7136681
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctg--tat 285  Q
    ||||||||| |||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||  | |    
T  7136524 aaaaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttt 7136623  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| ||||||||||||||||||||   ||||| |||||||||||||||||    
T  7136624 tacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaa 7136681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 18164758 - 18164911
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-aca 289  Q
    ||||| ||||||| ||||||||| ||||||||||||  ||||||| |||||  | || || | ||||| ||||||||||||  | |||||||| || |||    
T  18164758 aaaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttaca 18164857  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18164858 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 18164911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 8897761 - 8897916
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtatta 287  Q
    |||||||||||||| |||||| || ||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||| || | |||||  | | |||    
T  8897761 aaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctatttttta 8897860  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| || |||||||||||||| ||||||  ||||| | |||||||||||||||    
T  8897861 cacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaa 8897916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 6760962 - 6760805
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt- 286  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| | |||||| ||||||||||  ||| |||||||||| || | |||||||| ||     
T  6760962 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttt 6760863  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||||||||||||||||||||||||||  |||||  ||||| ||||||||||    
T  6760862 tacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaa 6760805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 26954271 - 26954115
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--- 286  Q
    ||||||||||||  |||||||| ||||||||||||| |  ||||||||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||       
T  26954271 aaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttt 26954172  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||||  |||||  | ||||||||||||||    
T  26954171 acacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaa 26954115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 339
Target Start/End: Complemental strand, 44530285 - 44530136
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||| ||||| ||||||||| ||||||||||||  |||||||  ||||||| ||||||||||||| ||||||||||||| | |||||||  | |||||    
T  44530285 aaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 44530186  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    ||||||| |||||||| ||||||||||||  |||||  ||||||||||||    
T  44530185 caagaggttgtttccaagacttgaacccgtgaccttctagtcacatgaca 44530136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 12626026 - 12625872
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattac 288  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||| ||||||||||||| |||||||| |||||| |||||||   | ||||    
T  12626026 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttac 12625927  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| |||||||||||||||| ||||  ||||   ||||||| ||||||||    
T  12625926 acaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaa 12625872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 31457308 - 31457156
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccct-gtattacac 290  Q
    |||||||||| | ||||||||||||||||||||||  |||||| ||||||||| ||| ||||||||  ||||||||||||| | |  |||  | ||||||    
T  31457308 aaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacac 31457209  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| ||||| |||||||||||||||  ||||||||| |||||||||||||    
T  31457208 aagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaa 31457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 343
Target Start/End: Original strand, 20284075 - 20284225
Alignment:
Q  199 caacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt----acacaa 292  Q
    ||||| ||||||||| | ||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||| | ||    | ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 20284225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 25250661 - 25250505
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt-- 286  Q
    ||||||||||||| ||||||||| | ||||||||||| | ||||  |||||||| ||||||||||  ||| ||||||||||||| |||||||| | ||      
T  25250661 aaaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttt 25250562  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| ||||||||||||||||||||||  |  ||||| |||||||||||||||||    
T  25250561 acacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaa 25250505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 343
Target Start/End: Original strand, 21070703 - 21070854
Alignment:
Q  199 caacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt-----acaca 291  Q
    ||||| ||||||||| | ||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||| | ||     | |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 21070854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 305
Target Start/End: Complemental strand, 19729476 - 19729363
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||| |  ||||||||||||||||| |||| ||||||| |||||||| ||||||||||||| ||||||||| ||| | |||||||| ||||| |    
T  19729476 aaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacata 19729377  T
Q  292 agaggctgtttcca 305  Q
    |||| |||||||||    
T  19729376 agagactgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 29877227 - 29877111
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaa 292  Q
    |||||| ||||||||||||  |||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||  | ||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 29877128  T
Q  293 gaggctgtttccaggac 309  Q
     ||||||||||||||||    
T  29877127 aaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 343
Target Start/End: Original strand, 44781517 - 44781658
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtt 301  Q
    |||||||| ||||||||||||  |||||||||||| ||| ||||| |||||  || ||||||||| ||| | |||||||| ||  |||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  302 tccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||  | ||||||||||| |||||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaa 44781658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 5135288 - 5135416
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--ac 288  Q
    |||||||||| || ||||||| | |||||| |||||  ||||||| |||||||| ||||||||||||| ||||||||| ||| | |||||| | ||  ||    
T  5135288 aaaaagggcagcccggtgcacaa-agctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttac 5135386  T
Q  289 acaagaggctgtttccaggacttgaacccg 318  Q
    ||||||||||||||||||||||||||||||    
T  5135387 acaagaggctgtttccaggacttgaacccg 5135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 24365081 - 24365212
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattacacaagaggctgtttccaggactt 311  Q
    ||||||| ||||  ||||||| |||||||| ||||||||||||| ||||||| ||||| | |||||||   | ||||||||||||||||||| ||| |||    
T  24365081 agctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggctt 24365180  T
Q  312 gaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||  || ||| ||||||||||||||||    
T  24365181 gaacccgtgacattttagtcacatgacaacaa 24365212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 26102655 - 26102578
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgta 267  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||    
T  26102655 aaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 20870063 - 20869941
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tat 285  Q
    |||||||||||||| ||||||||| ||||||||||||| | |||||  ||||||| |||||||||  |||| ||||||||||||| | |||||||  | |    
T  20870063 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 20869964  T
Q  286 tacacaagaggctgtttccagga 308  Q
    |||||||||| ||||||||||||    
T  20869963 tacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 8483950 - 8484064
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgttt 302  Q
    ||||| ||| ||||||||||||  |||||||||||| ||| |||||||| |||| ||||||||||||| | | |||||  | |||||||||||| |||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgttt 8484049  T
Q  303 ccaggacttgaaccc 317  Q
    |||||||||||||||    
T  8484050 ccaggacttgaaccc 8484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 389768 - 389642
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt----acacaagaggctgt 300  Q
    ||||||||| ||||| ||||||  ||||||| || ||||||||||| ||||||| ||||||||||||  | |||||||| ||    |||||||||| |||    
T  389768 ggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgt 389669  T
Q  301 ttccaggacttgaacccgcaacctttc 327  Q
    ||||||||||||||||||  |||||||    
T  389668 ttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 16225156 - 16225064
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctgt 283  Q
    ||||| ||||| ||||||||| ||||||||||||| | ||||| ||||||||||||||||||  |||| ||||||||||||||| ||||||||    
T  16225156 aaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgt 16225064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 28407457 - 28407399
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  28407457 ttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 28407399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 343
Target Start/End: Original strand, 42083712 - 42083851
Alignment:
Q  207 tgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccc--tgtattacacaagaggctgtttc 303  Q
    ||||||| ||||||| | || |||||||  |||||||| ||||||||||| ||  || ||||||||| | | |||  | | |||||||| ||||||||||    
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttc 42083811  T
Q  304 caggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||  ||||||||||||| |||||||||    
T  42083812 caggacttgaacccgtgacctttcagtcacgtgacaacaa 42083851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 24245562 - 24245434
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccattt---ggagtattgtacgcagtcataccctgtattacacaagaggctgtttccaggactt 311  Q
    ||||||||||||  |||||||  ||||||| |||||| ||||   || | |||||||| |||| ||||||||  |||| ||||| | |||||||||||||    
T  24245562 agctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgt--tacataagagac-gtttccaggactt 24245466  T
Q  312 gaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||  |||||||||||||||||||||||    
T  24245465 gaacccgtgacctttcagtcacatgacaacaa 24245434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 11748366 - 11748282
Alignment:
Q  261 tattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| ||| |||||||  | ||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

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Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 340
Target Start/End: Original strand, 23000263 - 23000365
Alignment:
Q  237 gggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    |||||||| ||||||||||||| |||||||| | |  | |||| ||| || |||||||||||||||||||||||||  |||||  |||||||||||||||    
T  23000263 gggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacat 23000360  T
Q  336 gacaa 340  Q
    |||||    
T  23000361 gacaa 23000365  T

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Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 343
Target Start/End: Complemental strand, 22598282 - 22598140
Alignment:
Q  202 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctg 299  Q
    |||||||||||| || |||||||||  || |||| ||||| || || ||||| |||| |||||||||  || | |||||||| ||  |||||||||| ||    
T  22598282 cctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttg 22598184  T
Q  300 tttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| |||||||||  ||||||||||||  |||||||||    
T  22598183 tttccaggatttgaacccgtgacctttcagtcatgtgacaacaa 22598140  T

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Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 5689754 - 5689640
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgttt 302  Q
    ||||||||| ||||||| ||||  || |||  |||||||| | ||||||||||| ||||||||||||| | |||||||  | |||||||||||||| |||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctattt 5689655  T
Q  303 ccaggacttgaaccc 317  Q
     || |||||||||||    
T  5689654 acaagacttgaaccc 5689640  T

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Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 10857966 - 10857845
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tatta 287  Q
    ||||||||||||| ||||||||| ||||||||||||  || ||||  ||||| | |||||||| |||| ||||||| ||||| | |||||||   | |||    
T  10857966 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgttttttta 10857867  T
Q  288 cacaagaggctgtttccaggac 309  Q
    |||||||||| |||||| ||||    
T  10857866 cacaagaggcggtttcctggac 10857845  T

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Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 30962867 - 30962925
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  ||  |||||||| ||||||||||||||    
T  30962867 ttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaa 30962925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 35105964 - 35105906
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| ||| |||||||||    
T  35105964 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaa 35105906  T

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Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 16013593 - 16013528
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||||| ||||| ||||||||| ||||||||||||  |||||||||||||||| || ||||||||    
T  16013593 aaaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccattt 16013528  T

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Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 14017990 - 14018121
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggactt 311  Q
    |||| |||||| | |||||||  ||||| | |||||||| ||| | |||||||||||||||  ||||||| ||  ||||||||| ||||||||| |||||    
T  14017990 agctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagactt 14018089  T
Q  312 gaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||   |||||||| |||| |||||||||    
T  14018090 gaacccatgacctttcaatcacgtgacaacaa 14018121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 20241947 - 20241863
Alignment:
Q  92 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 176  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  20241947 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 20241863  T

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Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 20251120 - 20251204
Alignment:
Q  92 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 176  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  20251120 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 20251204  T

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Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 35107310 - 35107374
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    |||||||||||| ||||||||| |||| ||||||| |||| ||| |||||||| |||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 23286378 - 23286432
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgt 300  Q
    ||||||||||||| |||||||||||||   |||||||| ||||||||||||||||    
T  23286378 tcccaccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 28407538 - 28407473
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 258  Q
    ||||||||||| |||||| || ||||||||||||   |||||| |||||||| |||||||||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttgg 28407473  T

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Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 27468089 - 27468141
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaag 242  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| ||||||    
T  27468089 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 23286337 - 23286379
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtc 235  Q
    |||||||| || ||||||||||||||||||||||| |||||||    
T  23286337 aaagggcagcccggtgcactagagctcccgcatatgcagggtc 23286379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20242099 - 20242063
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaac 37  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  20242099 ccaaacaaccaaagtgtgagaactcgactcaccaaac 20242063  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20250968 - 20251004
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaac 37  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  20250968 ccaaacaaccaaagtgtgagaactcgactcaccaaac 20251004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 42391097 - 42391250
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||    
T  42391097 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 42391196  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  42391197 caagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 42391250  T

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Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 21172008 - 21172159
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||    
T  21172008 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 21172107  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaa 21172159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 32758397 - 32758244
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||| ||| | |||||||| |||||    
T  32758397 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttaca 32758298  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  32758297 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 32758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 10693073 - 10693223
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    |||||||||||  |||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||| | ||||||||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacacaa 10693172  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10693173 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10693223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 197 - 343
Target Start/End: Original strand, 33871914 - 33872061
Alignment:
Q  197 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagag 295  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| ||||||||||||| | || |||| | |||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagag 33872013  T
Q  296 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||    
T  33872014 gttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 33872061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 48735122 - 48735273
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||| ||| ||||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacacaa 48735221  T
Q  293 gaggctgtttcc-aggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||||||||    
T  48735222 gaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaa 48735273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 42477005 - 42476856
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaag 293  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||||||||| ||||||||||||| | |||| ||| |||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaag 42476906  T
Q  294 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || |||||||||| ||||||| |||  |||||| ||||||||||||||||    
T  42476905 agactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaa 42476856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 11741927 - 11741778
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaag 293  Q
    |||||||||| ||||||||||||||||||||| | |||  || |||||||||||||||||||||| ||||||||||||| | |||||| | |||||| ||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctattttacactag 11741828  T
Q  294 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | ||||||| ||||||||||||||   |||||||||||||||||||||||    
T  11741827 aagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaa 11741778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 19426887 - 19427041
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||||| ||||||||  ||||| ||||||| ||||||| | |||||| ||||||||||||| ||||||||||||||| |||||| | ||  |    
T  19426887 aaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctatttttta 19426985  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  19426986 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 19427041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 42805663 - 42805507
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt-- 286  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||| ||||||||| ||| | |||||||| ||      
T  42805663 aaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 42805564  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  42805563 acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 42805507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 47077852 - 47078005
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||| ||||| | |||||||||||||||||||||||  ||||| ||||||||| ||||||||||| | ||||||||||||    ||| || | |||||    
T  47077852 aaaaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctattttaca 47077951  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  47077952 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 47078005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 11617589 - 11617740
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacaca 291  Q
    |||||||||| ||||||||| || ||| |||||  |||||||  ||||||| ||||||||||||| ||||||||||||||| |||||||  | |||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 11617688  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||||||||| |  |||||||||||||||||||||||    
T  11617689 agaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 11617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 42798806 - 42798652
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattac 288  Q
    ||||||||||||| | ||||||| ||||||||||||| ||||||| ||||| || ||||||||||||| ||||||||||||| | |||| ||  | ||||    
T  42798806 aaaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttac 42798707  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| ||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  42798706 acaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaa 42798652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 2541019 - 2541172
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    |||||| |||| ||||||||| ||||||||||||  ||||| | |||||||| ||||||||||||| |||| |||||||| | |||||||  | ||||||    
T  2541019 aaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacac 2541118  T
Q  291 aagaggctgtttccaggacttgaacccgcaaccttt-cagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  2541119 aagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaa 2541172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 192 - 329
Target Start/End: Original strand, 31591108 - 31591245
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| || |||| |||||||| |||||||||||   ||||||||||||| | ||| |||| |||||||    
T  31591108 aaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacaca 31591207  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcag 329  Q
    ||||| |||||||||||||||||| ||  |||||||||    
T  31591208 agaggttgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 47716596 - 47716442
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||| ||||||| | ||||||||||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  ||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 47716497  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  47716496 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaa 47716442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 27629771 - 27629617
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||||| ||||||||  |||| |||||||| ||||| | |||||||| ||||||||||||| ||||| ||||||  | |||||||| ||  ||    
T  27629771 aaaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttac 27629672  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| ||||||||||    
T  27629671 acaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaa 27629617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 34626205 - 34626359
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||||||||||| | || |||| ||||||||||||  ||||||| |||||||||||||||||||||| |||||| |||||| | ||||||| | ||||    
T  34626205 aaaaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttac 34626304  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| |||||||||||||||||||||| | |   ||||||| ||||||||||||||    
T  34626305 acaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaa 34626359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 22698967 - 22699122
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaag-ggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||| |||| ||||||||| |||||||||||| |||||||| |||||  || |||||||||||  || ||||||||||||||| |||||||| ||  |    
T  22698967 aaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 22699066  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| || ||||||||||||||||||  ||||||||||||||||||||||||    
T  22699067 cacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaa 22699122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 2662948 - 2663058
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttcc 304  Q
    ||||| ||||||||||||||||| |||||||||  ||||| ||||||||||||| ||||||||||||| | |||||| | ||||||||||||||||||||    
T  2662948 ggtgcgctagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttcc 2663046  T
Q  305 aggacttgaacc 316  Q
    ||||||||||||    
T  2663047 aggacttgaacc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 35334818 - 35334966
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaaga 294  Q
    |||| |||| ||||||||| |||||| |||||  ||||||| |||||||| |||||||||| || ||||||||| ||||| |||||||| ||  ||| ||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacga 35334917  T
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | ||||||||||||||||||| ||  ||||| |||||||||||||||||    
T  35334918 gactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaa 35334966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 43557613 - 43557455
Alignment:
Q  190 aaaaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    |||||||||||||| ||||||||| | |||||||||||  ||| ||| |||| ||| ||||||||||  ||| ||||||||||||| | ||| |||| ||    
T  43557613 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttt 43557514  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      |||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  43557513 ttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 43557455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 7879776 - 7879646
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||||| ||||||||  ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||| ||  | |||    
T  7879776 aaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttta 7879677  T
Q  288 cacaagaggctgtttccaggacttgaacccg 318  Q
    ||||||||  |||||||||||||||||||||    
T  7879676 cacaagagattgtttccaggacttgaacccg 7879646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 19266563 - 19266433
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttg 312  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||| ||||||||||||| | |||||||  | |||| |||| |||| ||| |||||||||    
T  19266563 agctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttg 19266464  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| | |||||||||||||||||||||||    
T  19266463 aacccacgacctttcagtcacatgacaacaa 19266433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 19265951 - 19265798
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-ac 288  Q
    ||||||||||| || ||||||||| ||||||| |||||  ||| || |||||||| ||||||||||||| ||||||||||||| | |||||| | || ||    
T  19265951 aaaaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttac 19265853  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| |||||| |||| ||||||||||||  ||||||||||||| |||||||||    
T  19265852 acaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaa 19265798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 32233132 - 32233286
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    ||||||||||| || ||||||||  ||||||| ||||| |||||| |||||||| |||||||||||||| ||| | ||||| | | ||||||| | ||||    
T  32233132 aaaaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttac 32233231  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| ||||||||||||||||||||   ||||||||||||  |||||||||    
T  32233232 acaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 13805214 - 13805085
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc-tgtattacacaagaggctgtttccaggacttga 313  Q
    ||||||||||||  |||||||  ||||| | ||||||||||||| ||||||||| ||| | ||||| ||| |||||| ||||||| ||||||||||||||    
T  13805214 agctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttga 13805115  T
Q  314 acccgcaacctttcagtcacatgacaacaa 343  Q
    |||||  |||||||||||||||||||||||    
T  13805114 acccgttacctttcagtcacatgacaacaa 13805085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 339
Target Start/End: Original strand, 23419674 - 23419822
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    |||||||| || | ||||||| ||| |||||| |  || ||||| ||||||| ||||||||||||| ||||||||||||||| |||||||  | ||||||    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacac 23419773  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    |||||||||||||||| ||||||||| |  |||||| ||||||||||||    
T  23419774 aagaggctgtttccagaacttgaacctgtgaccttttagtcacatgaca 23419822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 40464012 - 40463860
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacac 290  Q
    |||||||||||  ||||||||  ||||||||||||  ||||||| | |||||| ||||||||||||| ||||| ||||||| | ||||| | | ||||||    
T  40464012 aaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttacac 40463913  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||| | ||||||||||||  ||||| |||||||||||||||||    
T  40463912 aagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaa 40463860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 337
Target Start/End: Complemental strand, 29907552 - 29907408
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccc--tgtattacac 290  Q
    |||||||||| ||||||||| |||||||||  |||||||||| |||| ||| |||||||| ||||| |||||| |||||| | ||| |  | | ||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgc--atacagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 337  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttcagtcacatga 29907408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 28362167 - 28362297
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcatacc--ctgtattacacaagaggctgtttccaggacttg 312  Q
    ||||||| ||||| || ||||||||||||| ||||||||||||| ||||||||||||| | ||||   | | ||||||||||||| ||||| ||||||||    
T  28362167 agctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttg 28362266  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| |  ||||||||| |||||||||||||    
T  28362267 aacctgtgacctttcagccacatgacaacaa 28362297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 14099050 - 14099158
Alignment:
Q  237 gggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    |||||||| ||||||||||||| ||||||||||||||| || ||||| ||  |||||| ||||| |||||||||||| |||||   ||||||||||||||    
T  14099050 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14099149  T
Q  335 tgacaacaa 343  Q
    |||||||||    
T  14099150 tgacaacaa 14099158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 14409067 - 14409175
Alignment:
Q  237 gggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    |||||||| ||||||||||||| ||||||||||||||| || ||||| ||  |||||| ||||| |||||||||||| |||||   ||||||||||||||    
T  14409067 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14409166  T
Q  335 tgacaacaa 343  Q
    |||||||||    
T  14409167 tgacaacaa 14409175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccct-gtattacacaag 293  Q
    |||||||||  |||||| | ||||||||||||  ||||||| |||||||| |||||||||| || ||||||||||||| | ||||||  | |||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaag 18512554  T
Q  294 aggctgtttccaggacttgaacccgcaacctttc 327  Q
    | | |||||||||||||||||||||  |||||||    
T  18512555 atgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 48123508 - 48123636
Alignment:
Q  217 ctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgta--ttacacaagaggctgtttccaggacttgaa 314  Q
    ||||||||||| || ||||  | ||||| ||||||||||||| |||||||| |||||  ||||||||   ||||||||||||||||||||||||||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaa 48123607  T
Q  315 cccgcaacctttcagtcacatgacaacaa 343  Q
    |||   ||||||||| ||||||| |||||    
T  48123608 cccatgacctttcagacacatgataacaa 48123636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 340
Target Start/End: Complemental strand, 18747621 - 18747472
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattacac 290  Q
    ||||||| || ||||||||| ||||||||||||  ||||||   ||||||| |||||||| |||| ||||| ||||||| | |||||||   | ||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacac 18747522  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    || |||||||||||| ||||||| ||||  ||||||||||||| ||||||    
T  18747521 aaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 222 - 343
Target Start/End: Complemental strand, 46354302 - 46354177
Alignment:
Q  222 gcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaaccc 317  Q
    |||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  |||||||||| ||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  318 gcaacctttcagtcacatgacaacaa 343  Q
    |  ||||| || ||||||||||||||    
T  46354202 gtgaccttccaatcacatgacaacaa 46354177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 11828629 - 11828756
Alignment:
Q  61 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 160  Q
    |||||||  ||||| |||||||||||||| |||| ||||||| ||||||    |||||||| ||| | || ||||  | |||  ||||||||||||||||    
T  11828629 actcaccagacaaccaaattgtgagcacttgacccaccaaactaacaaa----ttgtgagcactatcttgtctcatcctacaatcaaacaaattgaatca 11828724  T
Q  161 aacgaaaccaaatcaaactgaacgaaactaaa 192  Q
    ||||||||||||||||||||||| ||||||||    
T  11828725 aacgaaaccaaatcaaactgaaccaaactaaa 11828756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 27889312 - 27889395
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||||||||||||| |||| || | ||||||||||||  ||||||| |||||||| ||||||||||||| |||||||||||||    
T  27889312 taaaaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 6530647 - 6530526
Alignment:
Q  63 tcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaa 162  Q
    ||||| |||||| ||||||||| || | |||  |||||||| |||||||||||||||   ||| | |||||||| |||||  |||||||||||||  |||    
T  6530647 tcaccaaacaaccaaattgtgaacatttgactcaccaaacagacaaaccaattgtgaatactatcttgactcacccaacaatcaaacaaattgaacaaaa 6530548  T
Q  163 cgaaaccaaatcaaactgaacg 184  Q
    |||| |||||||||||||||||    
T  6530547 cgaatccaaatcaaactgaacg 6530526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 7645047 - 7644939
Alignment:
Q  238 ggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    ||||||| |||||| |||| || |||||||||||  || |||||||| ||  ||||||||||||||||||||||||||||||||  |||||||||||||     
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacg 7644948  T
Q  335 tgacaacaa 343  Q
    | |||||||    
T  7644947 ttacaacaa 7644939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 38604639 - 38604546
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccagg 307  Q
    ||||||||||||  ||||||| || ||||| || |||||||||| ||||||||||||| | ||||||| | |||||||||||||||||||||||    
T  38604639 agctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 335
Target Start/End: Original strand, 38262193 - 38262340
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| | ||||||||| ||||||||||||  ||| ||  |||||||| ||||| ||||||| |||||||| |||    |||| | | ||  |    
T  38262193 aaaaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatatttttta 38262292  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    |||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  38262293 cacaagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 3469176 - 3469331
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg----tatta 287  Q
    ||||||||||  | |||||| |||||||||||| ||||||||| ||||||| |||| |||  ||||| ||||||||||||  | |||||||    | |||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttttta 3469275  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||  |||||| |||||||||  | |  |||||||||||||||||||||||    
T  3469276 cacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaa 3469331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 21566559 - 21566445
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctg--tattacacaagaggctgtt 301  Q
    ||||||||| ||||||||||||| ||||||  |||||||| ||| |||| ||||| ||||||||||||||| | | |||  | ||||||||||||| |||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtt 21566460  T
Q  302 tccaggacttgaacc 316  Q
    |||| ||||||||||    
T  21566459 tccaagacttgaacc 21566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 7193126 - 7193068
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||| ||||||||||||||  |||||||||||||||||||||||    
T  7193126 ttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaa 7193068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 21813867 - 21813745
Alignment:
Q  61 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 160  Q
    ||||||| |||||| ||| |||||||||| |||  |||||||||| ||||||||||||||   || | |||||| |  |||| |||||||||||||| ||    
T  21813867 actcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaataaaccaattgtgaggaatatcttgactcgcctaacaaccaaacaaattgaacca 21813768  T
Q  161 aacgaaaccaaatcaaactgaac 183  Q
    | |||| ||||||||||| ||||    
T  21813767 accgaatccaaatcaaaccgaac 21813745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 42495933 - 42495987
Alignment:
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  42495933 acaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaa 42495987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 44123715 - 44123769
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  44123715 ttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgaca 44123769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 5180218 - 5180309
Alignment:
Q  254 tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| || |||||| ||||| |||||||| ||  |||||||||||||||||||| | ||||||||   |||||||||||||||||||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaa 5180309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 6736969 - 6736873
Alignment:
Q  248 ccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||| |||||| |||| ||| || | |||||||| |||||  ||||||||||||||  ||||||||||| |||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaa 6736873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 8148985 - 8149098
Alignment:
Q  233 gtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcag 329  Q
    |||||||||||| ||||||||||||| ||||||||||||  | |||||| | ||   ||||||||||  |||| |||||||||||| ||  || || |||    
T  8148985 gtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcag 8149084  T
Q  330 tcacatgacaacaa 343  Q
    ||||||||||||||    
T  8149085 tcacatgacaacaa 8149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 7794600 - 7794658
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||||||||||||||||||  ||||| ||||||||| |||||||    
T  7794600 ttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaa 7794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 18327075 - 18327017
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||| |||||||||||||  |||||  ||||||||||||||||    
T  18327075 ttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaa 18327017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 35787268 - 35787378
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacac 290  Q
    |||||||||||| |||||| |  ||||||||||||  || |||| |||||||| |||| |||||||| ||||||||||||  | |||| || | ||||||    
T  35787268 aaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacac 35787367  T
Q  291 aagaggctgtt 301  Q
    |||||||||||    
T  35787368 aagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 39124031 - 39123873
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcat----accctgtat 285  Q
    ||||||||| | |||||||| | ||||||| ||||  ||||||| |||||||| |||||||||||  || ||||| ||||||| | |    ||||||| |    
T  39124031 aaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 39123932  T
Q  286 t-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | ||||||||| | ||||| ||||||||||||||   | ||||||||||||||||||||    
T  39123931 ttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaa 39123873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 15108427 - 15108520
Alignment:
Q  223 catatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccaggacttgaac 315  Q
    |||| ||||||| |||||||||||||||| |||||  ||||||||| ||| | |||| || | ||||||||||  |||||||||||||||||||    
T  15108427 catacacagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaac 15108520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 28078154 - 28078283
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattac-acaagaggctgtttccaggacttga 313  Q
    ||||| ||||||| |||| |  |||||||| ||||||||||||| |||||| | |||  | |||||||| ||   ||| ||| ||||||| |||||||||    
T  28078154 agctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttga 28078253  T
Q  314 acccgcaacctttcagtcacatgacaacaa 343  Q
    |||||  ||||| |||||||||||||||||    
T  28078254 acccgtgaccttacagtcacatgacaacaa 28078283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 1408556 - 1408469
Alignment:
Q  229 cagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaa 314  Q
    ||||||| |||||||| ||||||||||||  ||||||||| ||| | |||| ||| ||  |||||||||||| |||||||||||||||    
T  1408556 cagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 14732833 - 14732974
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtattacacaag--aggctgt 300  Q
    ||||||||| |||||||||||| |||||||  |||||||  |  ||||||||  || |||||| |||||| | |||||||| ||  ||| |  |||||||    
T  14732833 ggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgt 14732931  T
Q  301 ttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||   || ||||||||||||||||||||    
T  14732932 ttccaggacttgaacccatgacttttcagtcacatgacaacaa 14732974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 35203531 - 35203437
Alignment:
Q  238 ggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttca 328  Q
    |||||||||||||||||||  ||  |||||||||||||| || ||||| ||  |||||||||  |||||||||||||||||||||  ||||||||    
T  35203531 ggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 44338270 - 44338186
Alignment:
Q  92 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 176  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  44338270 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 44338186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 45018923 - 45018983
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 253  Q
    ||||||||||||||||||||| ||||||||||||  ||||||| |||||||| | ||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccacca 45018983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 11828638 - 11828693
Alignment:
Q  5 acaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatctt 60  Q
    ||||||||| |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  11828638 acaaccaaattgtgagcacttgacccaccaaactaacaaattgtgagcactatctt 11828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 45811985 - 45811919
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||||||||||||| | ||||||| |||||| |||||  |||||||||| |||||||||||||||||    
T  45811985 taaaaaagggcaacccg-tgcactaaagctcctgcataagcagggtctggaaagggatcccaccattt 45811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 328
Target Start/End: Complemental strand, 16341413 - 16341276
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acac 290  Q
    ||||||| || ||||||| | |||||||||||||    |||| |||||| |  |||||||||| || |||||||||| || | |||||||| ||  ||||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacac 16341314  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttca 328  Q
    ||||||||||||| || |||||||||||  ||||||||    
T  16341313 aagaggctgtttctagaacttgaacccgtgacctttca 16341276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 36602585 - 36602535
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctggga 240  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||||||||    
T  36602585 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 12473378 - 12473287
Alignment:
Q  254 tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||  | |||||||| ||  |||||||||| ||||| ||||||||||||||   |||||||||  ||||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaa 12473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 23231680 - 23231573
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgttt 302  Q
    ||||||||| |||| |||||||  ||||||  |||||||| ||||| |||| || ||||| ||||||| | |||| | ||||  |||||||||||| |||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctcttt 23231581  T
Q  303 ccaggact 310  Q
    ||||||||    
T  23231580 ccaggact 23231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21813862 - 21813823
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  21813862 ccaaacaaccaaagtgtgagcacttgactcaccaaacaaa 21813823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 42101899 - 42102009
Alignment:
Q  208 gcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctgtattacac--aagaggctgtttcc 304  Q
    |||||| |||| ||| |||  ||||||| ||||| || |||||||| ||| ||||| ||||||||||  |||||||| ||  ||  ||||||||||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  305 aggacttgaac 315  Q
    |||||||||||    
T  42101999 aggacttgaac 42102009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 46963921 - 46963980
Alignment:
Q  104 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 163  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  46963921 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 46963980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 25198864 - 25198798
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||||| |||||| ||||||||| ||||| | ||||   ||||||||||||||||||| |||||||    
T  25198864 aaaaaagtgcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccattt 25198798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 23618975 - 23619052
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtac 268  Q
    ||||||||||||| | ||||||| |||||| ||| |  || |||||| |||||| ||||||||||||  |||||||||    
T  23618975 aaaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtac 23619052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6530644 - 6530567
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaaca----aaccaattgtgagtactatctt-actcacccaacaa 73  Q
    ||||||||||||| ||||| || | ||| |||||||||    |||||||||||| ||||||||| |||||||||||||    
T  6530644 ccaaacaaccaaattgtgaacatttgactcaccaaacagacaaaccaattgtgaatactatcttgactcacccaacaa 6530567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 36267829 - 36267897
Alignment:
Q  205 ggtgcactagagctcccgcatatacaggg-tctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||||||| |||||||||||| |||||| || || || || ||| ||||||||| |||||||||||||    
T  36267829 ggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcag 36267897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 42495865 - 42495917
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcc 248  Q
    |||||||  ||||||||| ||||||||||||  ||||||| ||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaagggatcc 42495917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44338422 - 44338386
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaac 37  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  44338422 ccaaacaaccaaagtgtgagaactcgactcaccaaac 44338386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 1347100 - 1346947
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||    
T  1347100 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 1347001  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  1347000 caagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 1346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 1354756 - 1354907
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||    
T  1354756 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 1354855  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaa 1354907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 29355853 - 29356009
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtat--t 286  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| |  |    
T  29355853 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctt 29355952  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29355953 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 26097295 - 26097178
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||  ||||||| ||||||||||||| | |||||||| ||||||    
T  26097295 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgttttacac 26097196  T
Q  291 aagaggctgtttccagga 308  Q
    ||||||||||||||||||    
T  26097195 aagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 2166406 - 2166564
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctgta-- 284  Q
    ||||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||| |||||||||  |||| ||||||||||||  | || ||||||      
T  2166406 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2166505  T
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  2166506 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaa 2166564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 2178039 - 2178197
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctgta-- 284  Q
    ||||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||| |||||||||  |||| ||||||||||||  | || ||||||      
T  2178039 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2178138  T
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  2178139 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaa 2178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 12221913 - 12222069
Alignment:
Q  192 aaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt-- 286  Q
    |||||||||||| ||||||||| | |||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||      
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  12222013 acacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaa 12222069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 9161262 - 9161106
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt- 286  Q
    |||||||||||||||||||||||| |||| |||||||  ||||||| | |||||| ||||||||||  ||  ||||||||||||| | ||| |||| ||     
T  9161262 aaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgttttt 9161163  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  9161162 acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 9161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 25557860 - 25557743
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| | ||  ||||||| ||||||||||||| | |||||||| ||||||    
T  25557860 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgttttacac 25557761  T
Q  291 aagaggctgtttccagga 308  Q
    ||||||||||||||||||    
T  25557760 aagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 28007761 - 28007609
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    ||||||| || | |||||||||||||| ||||||||  ||| |  |||||||| ||||| ||||||| ||||||||||||| |  ||||||| |||||||    
T  28007761 aaaagggtaatccggtgcactagagcttccgcatatggaggtta-gggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgttttacaca 28007663  T
Q  292 agaggctgtttccaggacttgaacccgcaacc-tttca-gtcacatgacaacaa 343  Q
    ||||||| |||||||||||||||||||  ||| ||||| |||||||||||||||    
T  28007662 agaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaa 28007609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 32579553 - 32579436
Alignment:
Q  200 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccct-gtattacacaagaggct 298  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | |||| |  | ||| || |||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggct 32579454  T
Q  299 gtttccaggacttgaacc 316  Q
    ||||||||||||||||||    
T  32579453 gtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 3815084 - 3815229
Alignment:
Q  200 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcatacc--ctgtattacacaagaggc 297  Q
    |||| ||||||||| |||| |||||||   |||||  ||||| || ||||||||||||| ||||||||||||||| ||||   | | |||||||| || |    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtc 3815183  T
Q  298 tgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||  || ||||||||||||||||||||    
T  3815184 tgtttccaggacttgaacccgtgacatttcagtcacatgacaacaa 3815229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 21862034 - 21861937
Alignment:
Q  92 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaacgaaact 189  Q
    ||||| |||||||||||||||||||||||  |||   |||||||||||| | ||||| |||||||| ||||||||||||||||||||||||| |||||    
T  21862034 accaaacaaacaaacaaaccaattgtgagaactattttgactcactcaaaaaccaaataaattgaaccaaacgaaaccaaatcaaactgaactaaact 21861937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 340
Target Start/End: Original strand, 23240837 - 23240971
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttcca 305  Q
    |||||||| ||||||||||||  ||  |||   |||||| |||||||| ||||  |||||||||||  | |||||||| |||||||||||||||||||||    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagaggctgtttcca 23240936  T
Q  306 ggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    ||||||| ||| |  ||||||||||||| ||||||    
T  23240937 ggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 18277190 - 18277343
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||| ||||| |||||| || ||||||||||||   || |||| ||||||| ||||||||||||| ||  ||||| ||  | |||||||  | |||    
T  18277190 aaaaaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgattttta 18277289  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
    |||||||||||||||||| || |||||||||  |||||| ||||||| ||||||    
T  18277290 cacaagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 1941993 - 1941838
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||||  ||||||| | | |||||||||| ||| | ||  ||| ||| |||||||||| || ||||||||||||| | |||||||  | |||    
T  1941993 aaaaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgtttttta 1941894  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| ||||| || ||||| || |||| ||||| |||||| ||||||||||    
T  1941893 cacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaa 1941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 6808532 - 6808468
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||| |||||||| ||||||||||    
T  6808532 aaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 24097716 - 24097568
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||||||||||||||  ||||| |||| |||||||  ||||||| |||||||| |||||||||||||    ||||| |||| | |||||||  | ||    
T  24097716 taaaaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgtttttt 24097621  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    | ||||||||||| ||| ||||||| ||| ||  |||||||||| ||||||||    
T  24097620 atacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgaca 24097568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 32728156 - 32728308
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa-gggatcccaccatttggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||| |||||||||| || |||||||||   |||||||||||| ||||  |||| ||||||  |||||||| ||||| |||||||| ||  ||    
T  32728156 aaaagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaaggga--ccactatttggtatattgtacacagtcttaccctgttttttac 32728253  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | |||||| ||||||||  ||||||| | |  |||||||||||||||||||||||    
T  32728254 ataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaa 32728308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 8409311 - 8409226
Alignment:
Q  260 gtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| | |||||||| ||  ||||||||||| |||||||||||||||| |||  ||||||||||||||| |||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaa 8409226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 14975174 - 14975232
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  14975174 ttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 14975232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 12892147 - 12892082
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||    
T  12892147 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 7947371 - 7947514
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||||| ||  |||||||| ||||||| ||||  || |||| ||||||||  |||||||||| || ||||||||||||| | |||||||  | |||||    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttaca 7947470  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcac 333  Q
    || |||| ||||||||||| ||||||| |  |||||||||||||    
T  7947471 caggaggttgtttccaggagttgaaccggtgacctttcagtcac 7947514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 12886049 - 12885985
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    |||||||||||| ||||||||| ||||||| ||||  |||||||||||||||| |||||||||||    
T  12886049 aaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 33138956 - 33138841
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgttt 302  Q
    ||||||||| |||| | ||||| |||||||| || || || ||||||||||||| ||||||||||| | | ||| |||  | ||| |||||||| |||||    
T  33138956 ggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgttt 33138857  T
Q  303 ccaggacttgaacccg 318  Q
    ||||||||||||||||    
T  33138856 ccaggacttgaacccg 33138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 23930126 - 23930205
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgca 271  Q
    |||||||||||  ||||||||| ||||||||||||  ||||||| | |||||| ||||||||| ||| ||||||||||||    
T  23930126 aaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 13267862 - 13267788
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattg 265  Q
    ||||||||||||| ||||||||  ||||||||||||  |||||||  ||||||| ||||||||||||| ||||||    
T  13267862 aaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 13905034 - 13905131
Alignment:
Q  248 ccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| | |||||| |||| | |||||||| ||  ||||||||||  |||| |||||||||| ||||  |||||||||||||||||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaa 13905131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 14553626 - 14553495
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggact 310  Q
    |||||||||||| |||||||||  |||||| ||||||||  ||||| ||||| ||| ||| | |||||| | ||  |||||||| ||| |||||||||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  311 tgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |  |||||| ||||||||||||||||    
T  14553526 tgaacctgtgaccttt-agtcacatgacaacaa 14553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 383760 - 383837
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgc 270  Q
    ||||||||||| |||| |||  ||||||||||||  ||||||||| |||||| |||||| |||||| |||||||||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 343
Target Start/End: Original strand, 15866052 - 15866189
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac--aagaggctgtttc 303  Q
    |||||||| || ||||||| |  ||||||| |||||||| ||||||||||||| |||||  ||||||   |||||||| ||  ||  |||||||||||||    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  304 caggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||   |||||||| ||||||| ||||||    
T  15866150 caggaattgaacccatgacctttcaatcacatgccaacaa 15866189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 6024306 - 6024216
Alignment:
Q  255 ttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||||||||||| |||| ||| ||  ||||||||||||||||| |||| ||||| |||  ||||| || ||||||||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaa 6024216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 20400731 - 20400650
Alignment:
Q  264 tgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||| ||  |||||||||  ||||||||  ||||||||| |  |||||||||||||||||||||||    
T  20400731 tgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaa 20400650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 3116126 - 3116263
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctgtatta 287  Q
    |||||||||||| | |||| |||| ||||||||||||  || |||| | |||||| ||||||||  ||||| ||||||| |||||||||      | |||    
T  3116126 aaaaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtcat------tttta 3116219  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtc 331  Q
     |||||||| |||||||| |||||||||||   |||||||||||    
T  3116220 tacaagaggttgtttccatgacttgaacccatgacctttcagtc 3116263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 13167366 - 13167330
Alignment:
Q  145 caaacaaattgaatcaaacgaaaccaaatcaaactga 181  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13167366 caaacaaattgaaccaaacgaaaccaaatcaaactga 13167330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 25997786 - 25997750
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatat 227  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25997786 aaaaagggcaacccggtgcactagagctcccgcatat 25997750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 2755422 - 2755576
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgc--atatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtattac- 288  Q
    |||||||||| ||||||||| |||||||||  |||| |||| | ||||||||  |||||||||||  || ||||||||||||| | || ||| | ||       
T  2755422 aagggcaacc-ggtgcactaaagctcccgcgcatatgcaggatttgggaaggactcccaccatttttggtgtattgtacgcagccttagcctatttttgg 2755520  T
Q  289 -acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     | |||||| ||||| || ||||||||||  | |||||||||||||||||||||||    
T  2755521 tataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaa 2755576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 12063504 - 12063450
Alignment:
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| |||| ||||||||||||||  ||||||||||| ||||| |||||    
T  12063504 acaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaa 12063450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 12889562 - 12889409
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--aca 289  Q
    |||||||| || | ||||||| ||||||| || | | |||||| || ||||| ||||| | ||| || |||||||| |||| | | |||||| ||  |||    
T  12889562 aaagggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaaca 12889463  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| || |||||||||| |  |||||||| |||| |||||||||    
T  12889462 caagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaa 12889409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 20906783 - 20906837
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    ||||||| ||||| |||| ||||| ||||||||||||| | ||||||||||||||    
T  20906783 aaaaaagagcaacttggttcactaaagctcccgcatatgcggggtctgggaaggg 20906837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 17432381 - 17432332
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    |||||||||| | ||||||||||||||||||| |  ||||||||||||||    
T  17432381 ttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 28063812 - 28063853
Alignment:
Q  151 aattgaatcaaacgaaaccaaatcaaactgaacgaaactaaa 192  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||    
T  28063812 aattgaaccaaacgaaaccaaatcaaactgaaccaaattaaa 28063853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 30714 - 30562
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  30714 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacac 30615  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  30614 aagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaa 30562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 192 - 339
Target Start/End: Complemental strand, 32703558 - 32703411
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||    
T  32703558 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 32703459  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 35710449 - 35710296
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| || | || |||||||| ||||||||||||| |||||| |||||| | |||||| | |||||    
T  35710449 aaaaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttaca 35710350  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  35710349 caagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaa 35710296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 8169982 - 8170134
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| ||||||||  | ||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  8169982 aaaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 8170081  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  8170082 aaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 8170134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 41014454 - 41014302
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacac 290  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||  ||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||    
T  41014454 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 41014355  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  41014354 aagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 41014302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 38879719 - 38879564
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  |    
T  38879719 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 38879620  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  38879619 tacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 38879564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 24449028 - 24448873
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtatta 287  Q
    |||||||||||||| ||||||||| |||||| |||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||  | | |||    
T  24449028 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatttttta 24448929  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  24448928 cacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 24448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 7368528 - 7368413
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagag 295  Q
    |||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||||||| |||| ||||||||||||| | |||||||| |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagag 7368429  T
Q  296 gctgtttccaggactt 311  Q
    ||||||||||||||||    
T  7368428 gctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 4619103 - 4619258
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| ||||||||| ||||| ||||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  |    
T  4619103 aaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 4619202  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  4619203 cacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaa 4619258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 11335393 - 11335572
Alignment:
Q  7 aaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaaattgtgagcactagaccaaccaaacaaac 106  Q
    ||||||| |||||||| ||||| |||||||||| | || ||||||||||  |     |||| |||||  |||||||||||||| ||||  ||||||||||    
T  11335393 aaccaaattgtgagcattcgactcaccaaacaaccaaagtgtgagtacttcc-----caccaaacaaacaaattgtgagcacttgacccgccaaacaaac 11335487  T
Q  107 aaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaacgaaactaaa 192  Q
    ||||||||||||||| ||| | |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  11335488 aaaccaattgtgagcactatcttgactcac-caacaaccaaacaaattgaaccaaacgaaatcaaatcaaactgaatgaaactaaa 11335572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 43334341 - 43334185
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt-- 286  Q
    ||||||||||||| ||||||||| |||||||||||   ||||||| |||||||| |||||||||||  || ||||||||||||| | |||||||| ||      
T  43334341 aaaaagggcaacccggtgcactaaagctcccgcatcg-cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43334242 tacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 43334185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 1565566 - 1565414
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt---aca 289  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||||| |||||||| |||| |||||||| | ||||||||||| | ||   ||| ||   ||     
T  1565566 aaagggcaacccggtgcacta-agctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttact 1565468  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  1565467 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 1565414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 37024626 - 37024706
Alignment:
Q  263 ttgtacgcagtcataccctgtattacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 37024706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 22861668 - 22861818
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    ||||||||||   ||||||||||||||||||||||| ||||||  | |||||| ||||||||||||  |||||||  |||||| || | ||| |||||||    
T  22861668 aaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtctta-cttgttttacaca 22861766  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||| ||| |||||||||| |||  |||||||||||||||||||||||    
T  22861767 agagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaa 22861818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 28516432 - 28516586
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgga-gtattgtacgcagtcataccctgtatt--ac 288  Q
    |||||||||||||||| ||||| |||||| ||||   ||||||||||||| || ||||||||||| || ||||||||||||| | || ||||| ||  ||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttac 28516531  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| |||||||| ||||||||||||  ||||||||| ||| |||||||||    
T  28516532 acaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaa 28516586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 13801767 - 13801895
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tattac 288  Q
    ||||||||||| ||||||||| ||||| ||||||| | ||||| |||||||| |||||||||  |||| ||||||||||||| | |||||||  | ||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 13801866  T
Q  289 acaagaggctgtttccaggacttgaaccc 317  Q
    ||||||||||| |||||||||||||||||    
T  13801867 acaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 27328867 - 27328735
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggact 310  Q
    ||||||||||||  ||||||  |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  ||||||||| ||||||||||||||    
T  27328867 agctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggact 27328768  T
Q  311 tgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |  |||||||||||||||||||||||    
T  27328767 tgaacctgtgacctttcagtcacatgacaacaa 27328735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 34154814 - 34154903
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg 282  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 22600567 - 22600437
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattacacaagaggctgtttccaggacttg 312  Q
    ||||||||||||  |||| || |||||||||||||||||||||| ||||||||| ||| | |||||  ||| |||||||| |   |||||||||||||||    
T  22600567 agctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttg 22600468  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |||||| ||||||||||| |||||    
T  22600467 aacccgtaaccttccagtcacatgataacaa 22600437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 24323727 - 24323829
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttg 312  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||  | |||||||  | |||||||||||| ||||||||| |||||    
T  24323727 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24323826  T
Q  313 aac 315  Q
    |||    
T  24323827 aac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 24360351 - 24360453
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttg 312  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||  | |||||||  | |||||||||||| ||||||||| |||||    
T  24360351 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24360450  T
Q  313 aac 315  Q
    |||    
T  24360451 aac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 1405326 - 1405170
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtatt 286  Q
    ||||||||||||| | |||| |||||||||||||||||| ||||||   |||| || ||||||||||||| ||||||||||||  | ||| |  | | ||    
T  1405326 taaaaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctatttttt 1405227  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | | |||||| |||||||||||||||||||||  |||||  ||||||||||||||||    
T  1405226 atataagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 19142940 - 19143067
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||||||||  |  |||||||| | ||||||||||  || |||| |||||||| ||||||||||||| ||| ||||||||| | ||||||| | ||||    
T  19142940 aaaaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttac 19143039  T
Q  289 acaagaggctgtttccaggacttgaacc 316  Q
    |||||||| |||||||||||||||||||    
T  19143040 acaagaggttgtttccaggacttgaacc 19143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 343
Target Start/End: Complemental strand, 2838890 - 2838761
Alignment:
Q  216 gctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccaggacttgaa 314  Q
    |||||||||||  ||||||| | |||||||||||||||||||| ||||||||||||| | ||||||| | |||||||||| ||||||||   |||||||     
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgac 2838791  T
Q  315 cccgcaaccttt-cagtcacatgacaacaa 343  Q
    | ||  |||||| |||||||||||||||||    
T  2838790 ctcgtgacctttacagtcacatgacaacaa 2838761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 315
Target Start/End: Complemental strand, 43574729 - 43574617
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat--tacacaagaggctgttt 302  Q
    ||||| ||| ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||| | |||||||| |  ||||||||||  |||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgttt 43574630  T
Q  303 ccaggacttgaac 315  Q
    |||||||||||||    
T  43574629 ccaggacttgaac 43574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 12006329 - 12006482
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccc--tgtattaca 289  Q
    |||||||||  ||||||||| ||||||||||||  |||||||||||||||| |||||||||  |||| |||||||| | || | |||||  | | |||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttaca 12006428  T
Q  290 caagaggctgtttccaggacttgaa-cccgcaacctttcagtcacatgacaacaa 343  Q
     |||||| |||||||| |||||||| ||||  |||||||||||||||||||||||    
T  12006429 taagaggttgtttcca-gacttgaaccccgtgacctttcagtcacatgacaacaa 12006482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 16957450 - 16957374
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtac 268  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| |||||||||    
T  16957450 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 22187422 - 22187268
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||||| ||||||| |||||| ||||||  ||||| ||||||||| || ||   |||  || ||||||||||||||| || | ||| ||  ||    
T  22187422 aaagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttac 22187323  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||| |||| |  |||||||||||| ||||||||||    
T  22187322 acaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaa 22187268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 7097760 - 7097870
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacaca 291  Q
    |||||||| | |||||||||| ||||||||||||  ||||||  |||||||| || |||||||||| ||||||||||||  | ||||||| | |||||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacaca 7097859  T
Q  292 agaggctgttt 302  Q
    |||||||||||    
T  7097860 agaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 16028621 - 16028683
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc 252  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  16028621 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 16880647 - 16880757
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    |||||| |||| ||||||||| ||||||||||||  || |||| |||||| | || |||||||||| ||||||||||||| | |||||||  | ||||||    
T  16880647 aaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacac 16880746  T
Q  291 aagaggctgtt 301  Q
    |||||||||||    
T  16880747 aagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 20135740 - 20135623
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--aca 289  Q
    |||||||||| ||||||||  |||||| |||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||| ||| ||  |||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  290 caagaggctgtttccagg 307  Q
    ||||||||||||||||||    
T  20135640 caagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 342
Target Start/End: Complemental strand, 1850762 - 1850624
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttc 303  Q
    ||||||||| |||| ||||||   |||||||  ||||| | ||||||||||||  ||||||||||||  | ||  |||| || |||||||||| | ||||    
T  1850762 ggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttc 1850663  T
Q  304 caggacttgaacccgcaacctttcagtcacatgacaaca 342  Q
    | |||||||||||||  ||||||||||||||||||||||    
T  1850662 cgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 23974821 - 23974763
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  23974821 ttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 23974763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 208939 - 209079
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt-acacaagaggctgttt 302  Q
    ||||||||| |||||  |||||  |||||||  ||||||| ||||||||||| || |||||| | |||| | |||||||| || |||||||||| ||||     
T  208939 ggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttg 209038  T
Q  303 ccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||  |  |||||| ||||||||||||||||    
T  209039 ccaggacttgaacttgtgaccttttagtcacatgacaacaa 209079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 30877564 - 30877623
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc 252  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 9511825 - 9511703
Alignment:
Q  61 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 160  Q
    ||||||| ||||||  || |||||||||| |||  ||||||||||||||| |||||||||  ||| | | ||||||  |||| ||||||||||| || ||    
T  9511825 actcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaacgaattgtgaggactatcttaactcacctaacaaccaaacaaattcaacca 9511726  T
Q  161 aacgaaaccaaatcaaactgaac 183  Q
    | |||| ||||||||||| ||||    
T  9511725 agcgaatccaaatcaaaccgaac 9511703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 9794390 - 9794468
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||| |||| | |||||| | ||||||| ||||||||||||| |||||| |||||||| |||||| ||||||||    
T  9794390 ggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgt 9794468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 22907904 - 22908014
Alignment:
Q  233 gtctggga-agggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttgaacccgcaacctttcagt 330  Q
    |||||||| |||| ||||||||||||| |||||||| |||  | ||| |||| || |||||||||||||||||  ||||||||||||   ||||||||||    
T  22907904 gtctgggagaggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagt 22908003  T
Q  331 cacatgacaac 341  Q
    ||||| |||||    
T  22908004 cacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 19438800 - 19438759
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtc 235  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19438800 aagggcaacctggtgcactagagctcccgcatatgcagggtc 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 30006456 - 30006308
Alignment:
Q  197 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt--attacacaaga 294  Q
    ||||||| ||||||||| |||||||||||| | |||  | |||||||| ||||||||||| | ||| ||||| ||| | ||||||||   ||| | ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||| | ||||||||| |    |||||||||||||||||||||||    
T  30006356 ggttgttttccggacttgaatctatgacctttcagtcacatgacaacaa 30006308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 32354263 - 32354211
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    |||||||||||| ||||||||| |||||||||||| |||||||| ||||||||    
T  32354263 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 17419944 - 17419897
Alignment:
Q  296 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||    
T  17419944 gctgtttccaggacttgaactcgtaacctttcagtcacattacaacaa 17419897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 24136790 - 24136719
Alignment:
Q  92 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 163  Q
    ||||| ||||| |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  24136790 accaaacaaacgaacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 24136719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 22025584 - 22025538
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtc 331  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  22025584 ttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 25622595 - 25622533
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    ||||||||| | ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 29334532 - 29334415
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt-tggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||| || |||||| || || |||| ||||  ||||||| ||||| || |||||||||| ||| ||||||||||||| | |||| ||| ||  ||    
T  29334532 aaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttac 29334433  T
Q  289 acaagaggctgtttccag 306  Q
    ||||||||||||||||||    
T  29334432 acaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 42924842 - 42924977
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggt--ctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acacaagaggct 298  Q
    ||||||||| |||| |||||||  ||||||  |||||||||||| ||| |||||  || ||||||||||||  | |||||||| ||  |||||||| | |    
T  42924842 ggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatgtt 42924941  T
Q  299 gtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    |||| |||||||||||| ||  ||||||||||||||    
T  42924942 gttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9511820 - 9511742
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaac----aaaccaattgtgagtactatctt-actcacccaacaac 74  Q
    |||||||||| ||||||||||||||||| ||||||||    |||| ||||||||| |||||||| ||||||| ||||||    
T  9511820 ccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaacgaattgtgaggactatcttaactcacctaacaac 9511742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 39301163 - 39301106
Alignment:
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||| ||| ||||||||||||  |||||||||| ||||||||||||    
T  39301163 tacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaa 39301106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 39801652 - 39801591
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 253  Q
    |||| ||||||| ||||||||| ||||||||||||   ||||||||||||||| ||||||||    
T  39801652 aaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 4654426 - 4654478
Alignment:
Q  204 tggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    |||||||||| ||||||||||||| ||||||  | ||||||||||||||||||    
T  4654426 tggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccattt 4654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 13774988 - 13774920
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagt 273  Q
    ||||||||| ||||||||||||  ||||||| || |||||||||  |||||||| ||||||| ||||||    
T  13774988 ggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcagt 13774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 41426043 - 41425956
Alignment:
Q  233 gtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttgaacccg 318  Q
    |||||||||||| |||||||| |||| |||||||| |||| | |||||||  | |||||||| | | ||||||||| |||||||||||    
T  41426043 gtctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccg 41425956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9511851 - 9511813
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaa 39  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  9511851 ccaaacaaccaaattgtgagcactcgactcaccaaacaa 9511813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 34074656 - 34074714
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| |||||||||||  |  ||||||||||||  |||||||||    
T  34074656 ttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaa 34074714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 11462958 - 11462926
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatat 227  Q
    ||||||||| |||||||||||||||||||||||    
T  11462958 agggcaacccggtgcactagagctcccgcatat 11462926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 31299699 - 31299615
Alignment:
Q  260 gtattgtacgcagtcataccctgtattac-acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||  ||| |||| |||  ||||||||||||||| |||||||||||  |  |||| | ||||||||||||||||    
T  31299699 gtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaa 31299615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 34725097 - 34725248
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||| | ||||||||||||| | |||||||| |||||||    
T  34725097 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacaca 34725196  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 34725248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 38478278 - 38478432
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattac 288  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||| | ||||||||||| ||||||||||||| | |||||||| ||||    
T  38478278 taaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgttttac 38478377  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  38478378 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaa 38478432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 47214670 - 47214517
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||  | |||||||| ||| |    
T  47214670 aaaaaagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaa 47214571  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  47214570 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 47214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 32632556 - 32632708
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacac 290  Q
    ||||||| |||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||    
T  32632556 aaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 32632655  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  32632656 aagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaa 32632708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 191 - 335
Target Start/End: Original strand, 35253185 - 35253329
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  35253185 aaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 35253284  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    ||||||||||||| ||||||||||||||  | |||||||||||||    
T  35253285 aagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 45812534 - 45812687
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||| |||| | |||||| | |||||    
T  45812534 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctcttttaca 45812633  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |||||| ||||||||||||| |  |||||||||||||||||||||||    
T  45812634 caagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 45812687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 46247949 - 46248105
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||||||||||| ||| ||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||  | ||    
T  46247949 taaaaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 46248048  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  46248049 acacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 46248105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 19414596 - 19414445
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||||||||||||| | || ||||| ||||| |    
T  19414596 aaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttacata 19414497  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| |||| ||||||||||||||  |||||||||||| ||||||||||    
T  19414496 agaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaa 19414445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 14617197 - 14617044
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt--attaca 289  Q
    ||||||| |||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||  | |||| |||   |||||    
T  14617197 aaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttaca 14617098  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  14617097 caagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaa 14617044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 20004089 - 20004244
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||||||||||| |||||||||  |||| ||||||||||||| | |||| ||  | |||    
T  20004089 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttttta 20004188  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  20004189 cacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 20004244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 12126836 - 12126987
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||   |||||||| ||||||||||||| ||||||| |||||||| |||||| |||||| ||||||||||||| | |||||||| |||||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttacaca 12126935  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| ||||||||||| |||| ||||||  |||||||| | ||||||||||||    
T  12126936 agaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaa 12126987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 30395725 - 30395880
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||  ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  |    
T  30395725 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 30395824  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  |||||  ||||||||||||||||    
T  30395825 cacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaa 30395880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 46991966 - 46991810
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-- 286  Q
    |||||| |||||||| ||||||||| ||||||| ||||  ||||||| |||||||| |||||||||| || ||||||||| ||| | |||||||| ||      
T  46991966 taaaaatgggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtttttt 46991867  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  46991866 acacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 46991810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 18944807 - 18944649
Alignment:
Q  190 aaaaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    |||||||||||||| ||||||||| | |||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||    
T  18944807 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttt 18944708  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      ||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  18944707 ttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaa 18944649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 343
Target Start/End: Original strand, 23768334 - 23768472
Alignment:
Q  207 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttcc 304  Q
    ||||||| ||||||||||||  |||||||||||||||  ||||||||||||| ||||||||||||| | |||||||  | ||||||||||||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  305 aggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | |||||||||| |  ||||| |||||||||||||||||    
T  23768434 atgacttgaacctgtgaccttacagtcacatgacaacaa 23768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 45402257 - 45402101
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag---tcataccctg-tat 285  Q
    ||||| |||||||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||   |   |||||| | |    
T  45402257 aaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttt 45402158  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||    
T  45402157 tacacaagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaa 45402101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 27201813 - 27201653
Alignment:
Q  187 actaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgta 284  Q
    |||||||||||||||||   ||||||| ||||||||||||  || |||| |||||||| |||||||||||  || ||||||||||||| | ||||||||     
T  27201813 actaaaaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt 27201714  T
Q  285 tt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |   |||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  27201713 tctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 27201653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 18724543 - 18724697
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    ||||| ||||| | |||||||| | |||||||||||||  |||||| |||||||| |||||  |||||| ||||||||| ||| | |||||||| ||  |    
T  18724543 aaaaaggggcagcttggtgcacaa-agctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtttttta 18724641  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18724642 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 18724697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 335
Target Start/End: Complemental strand, 10668386 - 10668239
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||| ||||||||| ||||||||||||  ||||| | |||||||| |||||||||  |||| ||||||||||||  | |||| ||  | |||    
T  10668386 aaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttttta 10668287  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  10668286 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 6925261 - 6925106
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||| ||||||  ||||||||| ||||||||||||  ||||| | |||||||| |||||||||| || ||||||| ||||| | |||||| | ||  |    
T  6925261 aaaaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatttttta 6925162  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  6925161 cacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaa 6925106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 27474439 - 27474287
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacac 290  Q
    |||||||||| | ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  | |||||||||||||   | ||||| | ||||||    
T  27474439 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacac 27474340  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||| |||||||||| |  |||||||||||||||||||||||    
T  27474339 aagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaa 27474287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 41319805 - 41319958
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--aca 289  Q
    ||||||||||||  |||||||  | |||||||||||  |||||  |||||||| ||||| ||||||| ||||||||||||| | |||||||| ||  |||    
T  41319805 aaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttaca 41319904  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| ||||||||||||||| |||| |  |||||||||||||||||||||||    
T  41319905 caagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaa 41319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 343
Target Start/End: Original strand, 25468284 - 25468415
Alignment:
Q  214 gagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggactt 311  Q
    |||||||||||||  |||||||||||||| | ||| ||||||||| ||||||||||||  | |||||||  | |||||||||||| ||||||||||||||    
T  25468284 gagctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggactt 25468383  T
Q  312 gaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||   |||||||| ||||||||||||||    
T  25468384 gaacccatgacctttcaatcacatgacaacaa 25468415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 308
Target Start/End: Original strand, 31382211 - 31382330
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||||||||||| ||| || || ||||||||||||| |||||||  ||||||| ||||||||||||| ||||||||||||| | || |||| | ||||    
T  31382211 aaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttac 31382310  T
Q  289 acaagaggctgtttccagga 308  Q
    ||||||||||||||||||||    
T  31382311 acaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 333
Target Start/End: Complemental strand, 35005284 - 35005139
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||| ||||||||| ||| ||||||||  ||||||| |||||||| ||||||||  ||||| |||||||| |||| | |||||||  | |||    
T  35005284 aaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttta 35005185  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcac 333  Q
    ||||||||||||||| || ||||||||||||  |||||||||||||    
T  35005184 cacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 11596648 - 11596523
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttga 313  Q
    ||||||||||||  |||||||  ||||||| ||||||||||||| ||||| ||||||| | |||||||| || |||||||||| |||||| |||||||||    
T  11596648 agctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttga 11596549  T
Q  314 acccgcaacctttcagtcacatgaca 339  Q
    |||||  || ||||||||||||||||    
T  11596548 acccgtgacatttcagtcacatgaca 11596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 6983810 - 6983961
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    ||||||||| || ||||||| | |||||| || ||  ||||||| || ||||| ||||||||||||| ||||||||||||  | |||||||| ||  | |    
T  6983810 aaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttata 6983909  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     |||||||||||||||||||||||| |  ||||||||||||| |||||||||    
T  6983910 cgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaa 6983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 4349796 - 4349706
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 4349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 35117777 - 35117920
Alignment:
Q  205 ggtgcactagagctcccgcat-atacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acacaagaggctg 299  Q
    ||||||||| |||||| |||| |  ||||||| |||||||| ||||| |||||  || ||||||||| ||| | |||||||||||  ||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  300 tttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||  ||||||||||||| |||||||||    
T  35117877 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 35117920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 8197204 - 8197049
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||||| ||| ||||| ||||||  ||||  ||||||| | |||||| ||| ||||||||| ||| |||||| || | |||| ||| ||  |    
T  8197204 aaaaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgtttttta 8197105  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||  || ||||||||||||||||  |||||||||||||||||||||||    
T  8197104 cacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaa 8197049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 23796626 - 23796507
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    ||||||||||| || ||||||||| |||||| |||||| |||||||||||||||| || |||||||||| ||||||||||||  | |||  ||  | |||    
T  23796626 aaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgattttta 23796527  T
Q  288 cacaagaggctgtttccagg 307  Q
    ||||||||||||||||||||    
T  23796526 cacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 20036343 - 20036226
Alignment:
Q  229 cagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt---attacacaagaggctgtttccaggacttgaacccgcaacctt 325  Q
    ||||||| |||||||| | ||||||||||| |||||| ||||| || |||||| |    |||||||||||  |||||||||||||||||||||  |||||    
T  20036343 cagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctt 20036244  T
Q  326 tcagtcacatgacaacaa 343  Q
    ||||||||||||||||||    
T  20036243 tcagtcacatgacaacaa 20036226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 2435798 - 2435939
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtt 301  Q
    ||||||||| |||||||||||    |||||  || ||||| ||||||||||| || ||||||||||||| | |||||| | ||  ||||| |||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtt 2435897  T
Q  302 tccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  2435898 tccaggacttgaacccgtgacctttcagtcacgtgacaacaa 2435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 22327163 - 22327105
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  22327163 ttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 22327105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 343
Target Start/End: Original strand, 10378738 - 10378877
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagag 295  Q
    ||||| || ||||||||| ||||||||||||| |||||||   |||||| ||||||||||||| ||||||||||||| | |||||||| || | ||        
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttctca---- 10378832  T
Q  296 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
        ||||||||||||||||||| |||||||||||||| |||||||||    
T  10378833 ---ctttccaggacttgaacccgtaacctttcagtcacgtgacaacaa 10378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 18741955 - 18742113
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg---tat 285  Q
    |||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||| ||||||||  ||||| ||||||||||||| | |||||||   | |    
T  18741955 aaaaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T
Q  286 tacacaagaggctgttt-ccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || |||| || |||||| ||| || ||||||||   |||||||||||||||||||||||    
T  18742055 tatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaa 18742113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 22930105 - 22930219
Alignment:
Q  229 cagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccaggacttgaacccgcaacctttc 327  Q
    |||||||  ||||||| ||||||||||||| ||||||| | ||  | ||||||| | |||||||| ||||||||||||||||||||||||   |||||||    
T  22930105 cagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttc 22930203  T
Q  328 agtcacatgacaacaa 343  Q
    ||||||||||||||||    
T  22930204 agtcacatgacaacaa 22930219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 1517308 - 1517390
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    |||||||||||||| ||||||||| |||||| |||||  ||||||||| |||||| |||||||| |||| |||||||||||||    
T  1517308 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcag 1517390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 9939623 - 9939467
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggga-tcccaccattt--ggagtattgtacgcagtcataccctgtat--t 286  Q
    ||||||| |||| ||||||||| ||||||||||||  ||||||| | ||||||  |||||||||||  || |||||| |||||  | |||| ||| |  |    
T  9939623 aaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttctt 9939524  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    | |||||||| |||||||||||||||||| ||  |||||||||||||||||||||||    
T  9939523 aaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaa 9939467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 50606564 - 50606498
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  50606564 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 19701732 - 19701576
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcatacc--ctgtatt 286  Q
    ||||||||| | |||||||||||| ||||||||||||  ||||||| ||||||||  ||||||| ||||| ||||||||| ||  | ||||   | | ||    
T  19701732 aaaaaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagtttttt 19701633  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||| || ||||| ||||||  || ||||||||||| ||||||||    
T  19701632 acacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaa 19701576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 4430080 - 4430178
Alignment:
Q  247 cccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| ||||||||||||||| |||||||  | ||||||||||  |||||| || ||||| ||||||  ||||| |||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaa 4430178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 44485131 - 44485261
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttg 312  Q
    ||||||||||||   ||| || |||||||| ||| ||||||||| ||||||||||||| | |||| ||| ||  ||||||| || |||||||||||||      
T  44485131 agctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactat 44485230  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||  |||||||| ||||||||||||||    
T  44485231 aacccgtgacctttcaatcacatgacaacaa 44485261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 22325049 - 22324925
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt-acaca 291  Q
    |||||| |||||||||||| ||||||||||||  ||||||| |||| |||   |||||||||  || |||||||| |||| | |||||||| || |||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacaca 22324951  T
Q  292 agaggctgtttccaggacttgaaccc 317  Q
    |||||||||||||| |||||||||||    
T  22324950 agaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 315
Target Start/End: Original strand, 45264411 - 45264524
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatta--cacaagaggctgtt 301  Q
    ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| || |||||| || ||| | ||| |||| ||   ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  302 tccaggacttgaac 315  Q
    ||||||||||||||    
T  45264511 tccaggacttgaac 45264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 43768300 - 43768207
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||||| || |||||| || |||||||| |||  |||||||||||||||| |||||||| |||| |||||||| |||| | ||||||||    
T  43768300 aaaaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgt 43768207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 15505700 - 15505632
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||||||  ||||||  |||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  15505700 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 17470407 - 17470498
Alignment:
Q  254 tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||| | |||||||| ||  ||||||||||||||||| |||||||||||||   ||| ||||||||| |||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaa 17470498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 4249453 - 4249520
Alignment:
Q  203 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgc 270  Q
    |||||||| || |||||||||||| ||| |||  |||||||||||||||||||||| |||||||||||    
T  4249453 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 4249777 - 4249844
Alignment:
Q  203 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgc 270  Q
    |||||||| || |||||||||||| ||| |||  |||||||||||||||||||||| |||||||||||    
T  4249777 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 4250101 - 4250168
Alignment:
Q  203 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgc 270  Q
    |||||||| || |||||||||||| ||| |||  |||||||||||||||||||||| |||||||||||    
T  4250101 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 19932755 - 19932904
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acac 290  Q
    |||||||||||||||||||  | ||  |||||  ||||||| |||||||| |||||||||||  || ||||||||||||| | |||||||| ||  ||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||| ||| ||||  ||||||||||   |||||||||||||||||||||||    
T  19932855 aa-aggttgtatcca--acttgaacccatgacctttcagtcacatgacaacaa 19932904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 33223089 - 33222990
Alignment:
Q  246 tcccaccattt-ggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| || ||||||||||||  | | |||||| || ||||||||||||||||||| ||||| || |||  |||||||||||||||||||||||    
T  33223089 tcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaa 33222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 50760321 - 50760376
Alignment:
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
    ||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaac 50760376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 2435987 - 2436045
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| |||| |||||||||||||||||||||  ||||||||||||| |||||||||    
T  2435987 ttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 2436045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 35019390 - 35019236
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||| |||| || ||||||||| ||||| ||||||  ||||||||||| |||| |||||||| |||| |||||||| |||| | ||  |||  | |||    
T  35019390 aaaaaatggcagcccggtgcactaaagctctcgcatacgcagggtctggg-aggggtcccaccaattggtgtattgtatgcagccttatactgattttta 35019292  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     |||||||| ||||| ||||||||||| | |  ||||||||||||  |||||||||    
T  35019291 tacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaa 35019236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 340
Target Start/End: Original strand, 39214961 - 39215108
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acacaa 292  Q
    ||||| || ||||||||| |||| || ||||  |||||| |||||||||  |||||||||| ||| |||||||||||| | ||||| || ||  ||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    |||| ||||||||| ||||||||  |  |||||| |||||| ||||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaa 39215108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15630069 - 15630108
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaa 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  15630069 ccaaacaaccaaagtgtgagcactcgactcaccaaacaaa 15630108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 19386575 - 19386626
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagg 243  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  19386575 aaaagagcaacctggttcactagagctcccgcatatgcagggtccgggaagg 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 315
Target Start/End: Original strand, 27136663 - 27136776
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctg--tattacacaagaggctgtt 301  Q
    |||||||| ||||||||||||| ||| | ||| ||||||| |||||||| ||||| ||||||||||||  | |||| ||  | |||||||||||| ||||    
T  27136663 ggtgcactggagctcccgcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgtt 27136762  T
Q  302 tccaggacttgaac 315  Q
     |||| ||||||||    
T  27136763 cccagaacttgaac 27136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 31272468 - 31272522
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    |||||||||||| ||||||||||||||||||| |  ||||||||||||| |||||    
T  31272468 ttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 50812100 - 50811945
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--- 286  Q
    |||||||||| ||  ||||| || ||||||||||||  |||||   |||||||| ||| ||||||| || ||||||||||||  | |||||||| ||       
T  50812100 aaaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgttttttt 50812002  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| |||||||||||||| |||  |||  ||||||||||||| |||||||||    
T  50812001 acacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaa 50811945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 52910319 - 52910223
Alignment:
Q  250 accatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| || ||||||||| ||||| |||||||| ||   ||  ||||||||||||||| || ||||||| |  |||||||||||||||||||||||    
T  52910319 accattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaa 52910223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 25290229 - 25290169
Alignment:
Q  285 ttacacaagaggctgt--ttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||  ||||| ||||||||| ||  |||||||||||||||||||||||    
T  25290229 ttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaa 25290169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 42304205 - 42304270
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||||||||| | ||||||||| ||||||| ||||  ||||||| |||||||| |||||||||||    
T  42304205 aaaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattt 42304270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 43207640 - 43207528
Alignment:
Q  207 tgcactagagctcccgcatatacagggtctgggaagggatcccacc-atttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttc 303  Q
    ||||||| ||||| |||||| | ||||||||||||| | ||||||| |||||| |||||||| || ||| |||||||| ||  ||| |||||| ||||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgtttc 43207541  T
Q  304 caggacttgaacc 316  Q
    || ||||| ||||    
T  43207540 caagacttaaacc 43207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 2072458 - 2072530
Alignment:
Q  96 accaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaac 168  Q
    ||||||||| ||||||||| |||||| ||| | |||||||| ||||| | ||||||||||||  |||||||||    
T  2072458 accaaacaatcaaaccaatggtgagccctatcttgactcacccaacaactaaacaaattgaactaaacgaaac 2072530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 4587568 - 4587628
Alignment:
Q  198 gcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 258  Q
    |||||| ||||||||  ||||||||||||  ||||||| |||||||| |||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttgg 4587628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 33594144 - 33594196
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 258  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||||| ||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 21723728 - 21723670
Alignment:
Q  284 attacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||| |||||  | |||| | |||||||||||||||||    
T  21723728 attacacaagaggctgtttccaggac-tgaacttgtaaccatccagtcacatgacaacaa 21723670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 28894561 - 28894636
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgca 271  Q
    ||||| |||||||||||| ||||| ||||||| |||||||| ||||||| |   ||||||||  ||||||||||||    
T  28894561 gggcagcctggtgcactaaagctctcgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgca 28894636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 34148974 - 34149076
Alignment:
Q  207 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttcc 304  Q
    |||||||| ||||| |||||| |||||||  ||||||| || ||||||||||  | |||||||||  | |||||| | ||  ||||||||||||||||||    
T  34148974 tgcactagcgctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttcc 34149073  T
Q  305 agg 307  Q
    |||    
T  34149074 agg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2072394 - 2072444
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 51  Q
    ||||||||||||||| |||||||||||| || ||||||| | |||||||||    
T  2072394 ccaaacaaccaaagtatgagcactcgactcatcaaacaatcaaattgtgag 2072444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 4430008 - 4430078
Alignment:
Q  202 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||| |||||| |||||||||||| ||||| ||  | ||||| | ||||||||||| |||||||||||||    
T  4430008 cctggagcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcag 4430078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19825111 - 19825161
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 51  Q
    ||||||||||||| |||||||||||||| | |||||||| | |||||||||    
T  19825111 ccaaacaaccaaattgtgagcactcgactcgccaaacaaccaaattgtgag 19825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 34714675 - 34714629
Alignment:
Q  297 ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaa 34714629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 43768210 - 43768168
Alignment:
Q  297 ctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    ||||||||||||||||||||||  |||||||||| ||||||||    
T  43768210 ctgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 16120876 - 16120823
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    |||||||||| ||||||||| || ||||||||||||| ||||| | ||||||||    
T  16120876 aaaaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggg 16120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 20169111 - 20169207
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcatacc--ctgtattacacaagaggctgtttccaggac 309  Q
    ||||||||||||| ||||||| |||||||  |||||||  |||| ||||||||| ||||| ||||   | | |||||||||||| ||||| ||||||    
T  20169111 agctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 30682948 - 30682844
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccaggacttga 313  Q
    ||||||||||||  || |||| |||||||| ||||||||||||  ||| ||||| || || |||| || | |||||||||||||| ||| ||||| ||||    
T  30682948 agctcccgcatacgcacggtccgggaaggggtcccaccatttgttgta-tgtacacaatcttaccttgtttttacacaagaggctattttcaggatttga 30682850  T
Q  314 acccgc 319  Q
    ||||||    
T  30682849 acccgc 30682844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 315
Target Start/End: Original strand, 31442396 - 31442515
Alignment:
Q  200 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctg---tattacacaagag 295  Q
    |||| ||||||| | ||||||| |||| |||| ||| |||||||| |||||||| ||||| ||||||||||||  | |||||||   | ||||| || ||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttttacataaaag 31442495  T
Q  296 gctgtttccaggacttgaac 315  Q
    |||||||| | |||||||||    
T  31442496 gctgtttctaagacttgaac 31442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 7074664 - 7074588
Alignment:
Q  204 tggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcatacc 279  Q
    |||||||||| |||||||| |||| |||||||| | ||| | |||||| |||| || ||||||||||||| ||||||    
T  7074664 tggtgcactaaagctcccggatatgcagggtctagaaagaggtcccacaattttggtgtattgtacgcagccatacc 7074588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 20999849 - 20999929
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||||||| || ||||||||| ||||||||| ||  ||||||   |||||||  |||| ||||||| |||||||||||||    
T  20999849 aaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcag 20999929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 24564445 - 24564354
Alignment:
Q  250 accatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    ||||||||| | ||||||||||  | |||||||| ||  |||||||||| |||||||| |||||||| | || |||||||| ||||| ||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagaca 24564354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 47528527 - 47528680
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||    
T  47528527 aaaaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 47528626  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  47528627 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 47528680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 48598823 - 48598975
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| |||||||||||||||| |||||| || |||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  48598823 aaaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 48598922  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  48598923 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 48598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 20225117 - 20224967
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 20225018  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||||||||||||||||   |||||||||||||||||||||||    
T  20225017 gaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 20224967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 11054145 - 11054298
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| | || |||||||| ||||||||||||||| |||||||| |||||    
T  11054145 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttttaca 11054244  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |||||| |||||||||||||||  |||||||||||||||||||||||    
T  11054245 caagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaa 11054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 9832311 - 9832463
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| |||||||||||| ||| |||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  9832311 aaaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 9832410  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||  |||||||||||| || |||||||    
T  9832411 aagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaa 9832463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 195 - 334
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaaga 294  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaga 29207999  T
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    |||  |||||||||||||||||||  ||||||||||||||    
T  29208000 ggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 5648395 - 5648242
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattaca 289  Q
    |||||||||||||  |||||||  ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | ||||||| | |||||    
T  5648395 aaaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttaca 5648296  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  5648295 caagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaa 5648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 17043392 - 17043546
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgta--tta 287  Q
    ||||| ||||| ||||||||| || |||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||  |||    
T  17043392 aaaaaggggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtatttta 17043490  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||    
T  17043491 cacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaa 17043546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 16408598 - 16408755
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt- 286  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| | ||||||||  ||| ||||||||||||||| |||||||| ||     
T  16408598 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttt 16408697  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  16408698 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 16408755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 6430627 - 6430777
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaa 292  Q
    |||||||||| ||||| ||| ||||||||||||  ||||||| |||||| | ||||||||||||| ||||||||||||| | |||||||| || ||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 6430726  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  6430727 gaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaa 6430777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 30639517 - 30639363
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    ||||||||||||||  |||||||| ||||||||||||| ||||||| |||||||| || |||||||||| ||||||||||||| | ||||||| | ||||    
T  30639517 aaaaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttac 30639418  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| |||||||||||||||||||| |  |||||||||||||| ||||||||    
T  30639417 acaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaa 30639363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 39077793 - 39077946
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||| || |||   || ||||||||||  |||||||||||  | |||||||| |||||    
T  39077793 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgttttaca 39077892  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  39077893 caagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaa 39077946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 8473621 - 8473772
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggt--ctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||| ||||||||| ||||||||||||| |||||   | |||||||| ||||||||||||| |||||||| |||| | ||||||||   |||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaaacaca 8473720  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  8473721 agaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaa 8473772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 40915962 - 40915812
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaa 292  Q
    |||||||| | ||||||||  ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||| ||| || ||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaa 40915863  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||||||||    
T  40915862 gaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaa 40915812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 5306657 - 5306811
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccg----catatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-ta 284  Q
    |||||||||||||| |||||| || ||||||||    ||||  ||||||| |||||||| ||||||||||||| ||||||||||||  | ||||||| |     
T  5306657 aaaaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgatt 5306756  T
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 339  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  5306757 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 5306811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 343
Target Start/End: Complemental strand, 21647098 - 21646947
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--acaca 291  Q
    |||||||| ||||||||| ||||||||||||| | |||||||||||||| ||||||||||  |||  |||||||||||| | |||||| | ||  |||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||| |  ||||| |||||||||||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaa 21646947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 190 - 327
Target Start/End: Complemental strand, 47444095 - 47443956
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    ||||||||||||||  |||||||  |||||| |||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||  | |||    
T  47444095 aaaaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 47443996  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttc 327  Q
    | |||||||||||||||||||||||||||||  |||||||    
T  47443995 cgcaagaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 54175202 - 54175046
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggt-ctgggaagggatcccacca-tttggagtattgtacgcagtcataccctg-tatta 287  Q
    |||||||||| || ||||||||| ||||||||||||| |||||| | |||||||| |||||||| ||||| ||||||||||||| | ||||||| | |||    
T  54175202 aaaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttta 54175103  T
Q  288 cacaagaggctg-tttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| ||||||||||||||| |||  || ||||||||||||||||||||    
T  54175102 cacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaa 54175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 23501927 - 23501776
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tat 285  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||  |||| ||||||||||||  | |||||||  | |    
T  23501927 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttt 23501828  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||      ||||||||||||  |||||||||||||||||||||||    
T  23501827 tacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaa 23501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 25463258 - 25463108
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--ac 288  Q
    |||||||| | |||||||||| | ||||||||||||| ||||||| |||||||| ||||||||||||| || |||||||||  | | ||| || ||  ||    
T  25463258 aaaaagggtagcctggtgcacaa-agctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttac 25463160  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  25463159 acaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 44363130 - 44363284
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg--tattac 288  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||  ||||| |  |||||||||| | |||||||  | ||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttac 44363229  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| |||||||||| |||||||||||| ||  |||||||||||||||||||||||    
T  44363230 acacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaa 44363284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 309
Target Start/End: Original strand, 20639655 - 20639777
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccctg--tatt 286  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||| ||||||||||||| | |||||||  | ||    
T  20639655 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttt 20639754  T
Q  287 acacaagaggctgtttccaggac 309  Q
    |||||||||||||||||||||||    
T  20639755 acacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 16911700 - 16911545
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| |||  |||| ||||||||| ||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||  ||  |    
T  16911700 aaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgta 16911601  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||    
T  16911600 cacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaa 16911545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 343
Target Start/End: Complemental strand, 19027971 - 19027831
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgttt 302  Q
    ||||||||| ||||||| ||||  ||| |||||| ||||| |||||||| |||| ||||||||||||| | |||||||| ||  |||||||| | |||||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  303 ccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  19027871 ccaggacttgaacccgtgacctttcagtcacgtgacaacaa 19027831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 341
Target Start/End: Original strand, 30690176 - 30690333
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---------t 283  Q
    |||||||| |||||||||||| ||||||||||||  ||||||| |||||||| |||||||| |||| |||||||| |||| | |||||||         |    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattt 30690275  T
Q  284 attacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
     |||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||    
T  30690276 tttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaac 30690333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 35567309 - 35567153
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatt 286  Q
    |||||||||||| || ||||||||| |||||||||| |  ||||||  |||||||| ||||||||||||| || |||||| ||| | |||||||  | ||    
T  35567309 taaaaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtttttt 35567210  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| ||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  35567209 acacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaa 35567153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 10277755 - 10277882
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||| | ||| ||||||| ||||||||||| |||||||||||||||| |  |||||||||| ||||||||||||| | || ||| | ||| ||    
T  10277755 aaaaagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctattttatac 10277854  T
Q  291 aagaggctgtttccaggacttgaacccg 318  Q
    ||||||||||||| |||| |||||||||    
T  10277855 aagaggctgtttcaaggatttgaacccg 10277882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 343
Target Start/End: Original strand, 41018833 - 41018945
Alignment:
Q  232 ggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttccaggacttgaacccgcaacctttcagt 330  Q
    ||||||||||||| |||||| |||||| |||||||||| || | ||||||  | |||||||||||| |||||||||||||||||||||  ||||||||||    
T  41018833 ggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacctttcagt 41018932  T
Q  331 cacatgacaacaa 343  Q
    ||| |||||||||    
T  41018933 cacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 343
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  216 gctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttga 313  Q
    ||||||||||| |||||||| ||||| || ||||||||||||| |||||| || ||  | |||||| | ||  ||||| ||||||||||||||| |||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  314 acccgcaacctttcagtcacatgacaacaa 343  Q
    |||||  |||||||||||||||||||||||    
T  7385599 acccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 25629186 - 25629069
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattac 288  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||| |||||||| ||||||||||||| ||||||||| ||| | |||||  | | ||||    
T  25629186 aaaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttac 25629087  T
Q  289 acaagaggctgtttccag 306  Q
    ||||||| ||||||||||    
T  25629086 acaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 38786747 - 38786673
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtatt 264  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||    
T  38786747 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 49938615 - 49938742
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttg 312  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| || ||||||||| |   | ||||| || || ||||||||||||||||||||||||||    
T  49938615 agctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggacttg 49938711  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| |  ||||||||||||| |||||||||    
T  49938712 aacctgtgacctttcagtcacgtgacaacaa 49938742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 14983970 - 14983817
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattaca 289  Q
    ||||||||||| |||| ||||| ||||||||||||  ||||||| |||||||| ||||||||||| | |||||||| |||  | |||||  | | |||||    
T  14983970 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttaca 14983871  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||| | |||||||| |||  ||||| || ||| ||||||||||    
T  14983870 caagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaa 14983817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 9987831 - 9987957
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgt--atta 287  Q
    |||||| |||| || |||||| || ||||||||||||| || ||||  ||||||| ||||||||||||| |||||||| |||| | |||||| |   |||    
T  9987831 aaaaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgttta 9987930  T
Q  288 cacaagaggctgtttccaggacttgaa 314  Q
    ||||||||| |||||||||||||||||    
T  9987931 cacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 30496334 - 30496472
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc-tgtattacacaagaggctgtttc 303  Q
    ||||||||| ||||||  ||||  || |||| |||||||  |||| |||||||| |||||||| |||| | ||||| ||| |||||||||||||||||||    
T  30496334 ggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttacccgtgt-ttacacaagaggctgtttc 30496432  T
Q  304 caggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||||||| ||  ||||||||||||| |||||||||    
T  30496433 catgacttgaacacgtgacctttcagtcacgtgacaacaa 30496472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 13256397 - 13256549
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||||||||| ||||||||| |||||||||| || | ||||  |||||||| |||||| ||  |||| ||||||||||||| | |||||||  | ||    
T  13256397 aaaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttttt 13256496  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||    |||||||||||||||    ||||| |||||||||||||||||    
T  13256497 acacaagaggc----tccaggacttgaacctatgaccttccagtcacatgacaacaa 13256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 20225211 - 20225119
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||| ||||||||||||| | ||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 308
Target Start/End: Original strand, 7909281 - 7909397
Alignment:
Q  194 aagggcaacctggtgcactagagctccc-gcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacaca 291  Q
    |||||||||| | ||||||| ||||||| |||||  ||||||  |||||||| ||||||||||||| ||||||||||||  | ||||||| | |||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacaca 7909380  T
Q  292 agaggctgtttccagga 308  Q
    |||| ||||||||||||    
T  7909381 agagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 10660544 - 10660387
Alignment:
Q  190 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    ||||| |||||||| | |||||| | ||||||||||||  |||| ||| ||||||| || |||||||  ||| |||||||| |||| |||||||| | ||    
T  10660544 aaaaaggggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctatttt 10660446  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      ||| |||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  10660445 ttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaa 10660387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 10874689 - 10874532
Alignment:
Q  190 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    ||||| |||||||| | |||||| | ||||||||||||  |||| ||| ||||||| || |||||||  ||| |||||||| |||| |||||||| | ||    
T  10874689 aaaaaggggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctatttt 10874591  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      ||| |||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  10874590 ttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaa 10874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 32484371 - 32484307
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 254  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||    
T  32484371 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 49796910 - 49796818
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccag 306  Q
    ||||||||||||  ||||||  |||||||| ||||||||||||| ||||||||||||| | |||| ||| || ||||||||||||||||||||    
T  49796910 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 28494289 - 28494222
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 257  Q
    |||||| |||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  28494289 aaaaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatttg 28494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 343
Target Start/End: Complemental strand, 37494972 - 37494834
Alignment:
Q  207 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttcc 304  Q
    ||||||| |||||| |||||  |||||||  | ||||| |||||||||||||  ||||||| |||  | |||||||| ||  |||||||||| |||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  305 aggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |  ||||||||||| |||| ||||||    
T  37494872 aggacttgaacctgtgacctttcagtcgcatggcaacaa 37494834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 14590920 - 14590820
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 342  Q
    ||||||||||||  |||||||| |||| | |||||||| ||   | ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  14590920 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 14590821  T
Q  343 a 343  Q
    |    
T  14590820 a 14590820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 20908633 - 20908790
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcatacc--ctgtatt 286  Q
    ||||||||||| ||| |||||||| ||||||||||||  ||||||  |||||||| |||||||| ||||| ||||||||||||| | ||||  || | ||    
T  20908633 aaaaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttt 20908732  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaac-ctttcagtcacatgacaacaa 343  Q
    | | |||| | |||||||| |||||||||  | |||  ||||||||||||||||||||    
T  20908733 agaaaagacgatgtttccatgacttgaacatgtaacattttcagtcacatgacaacaa 20908790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 42164242 - 42164300
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||    
T  42164242 ttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaa 42164300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 343
Target Start/End: Complemental strand, 54730375 - 54730232
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt---acacaagaggctg 299  Q
    ||||||||| ||||||||||||  ||||||| |||||||| | ||| ||||  ||| ||||| ||||||| | || ||| | ||   |||||||||||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctg 54730276  T
Q  300 tttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||||||||||  ||||||  |||||||||||||||    
T  54730275 tttctaggacttgaacccgtgaccttttggtcacatgacaacaa 54730232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 487230 - 487287
Alignment:
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaa 487287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 47441566 - 47441682
Alignment:
Q  229 cagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttgaacccgcaaccttt 326  Q
    ||||||| |||||||| ||| ||||||||| ||||||||| ||| | |||||||  | ||||| ||||| |||||||  ||||||||||| |  ||||||    
T  47441566 cagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgaccttt 47441665  T
Q  327 cagtcacatgacaacaa 343  Q
    ||||||| |||||||||    
T  47441666 cagtcacgtgacaacaa 47441682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 51865037 - 51865149
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||||||  | |||||| || ||||||||||||  ||||||| ||||||||  |||||||||||| ||||||||||||| | |||| ||  | |||||    
T  51865037 aaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttaca 51865136  T
Q  290 caagaggctgttt 302  Q
    |||||||||||||    
T  51865137 caagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 21489210 - 21489099
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acacaagaggctgttt 302  Q
    |||||| | ||||||||||||  ||||||  |||||||| ||||||||||| || | ||||||||||||| ||| |||| ||  || |||||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgttt 21489111  T
Q  303 ccaggacttgaa 314  Q
    ||||||||||||    
T  21489110 ccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 30352577 - 30352743
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcag----tcataccctg- 282  Q
    |||||||||||||  ||||||||| ||||||||||||  ||||||| | |||||| ||||||||  ||||| |||||||||||||     | |||||||     
T  30352577 aaaaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgt 30352676  T
Q  283 ------tattacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
          | ||||||||||||||||||||||||||  ||||||  ||||||| ||||| |||||||||    
T  30352677 ttttttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaa 30352743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 32478792 - 32478937
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acaca 291  Q
    ||||||| ||| ||||||| | ||||||||||||  | ||||| |||||||| ||||||||||||| |||||     ||| | |||||||| || ||||     
T  32478792 aaagggccacccggtgcacaa-agctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgtttttacact 32478885  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||||||||| |  |||| || |||||||||||||||    
T  32478886 agaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaa 32478937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 54967133 - 54967004
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttg 312  Q
    |||||||||||||  |||||  |||||||| |||||||||||||  ||||||| |||  | |||||||  | |||||||||||| | ||||||| |||||    
T  54967133 agctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttg 54967035  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    |||  |  |||||||||||||||||||||||    
T  54967034 aacatgtgacctttcagtcacatgacaacaa 54967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 17315392 - 17315450
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||| |||| |||||||||  |||||||||||||||||||||||    
T  17315392 ttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaa 17315450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 20405224 - 20405109
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg---tatta 287  Q
    |||||||||||   ||||||| ||||||||||||| | ||||| |||||||| |||||||||  || | |||||||||||| || |||||||   | |||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttttta 20405125  T
Q  288 cacaagaggctgtttc 303  Q
    ||||||||||||||||    
T  20405124 cacaagaggctgtttc 20405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 43035289 - 43035231
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| ||||||| |||||||||||||  ||||||||||||| |||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaa 43035231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 54147725 - 54147571
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaa----attgtgagcactagaccaa 96  Q
    ||||||||| |||||||||||||  ||| |||||||||||| |||| |||| |||   | || |||| |||||  ||    || ||||||||| |||| |    
T  54147725 ccaaacaactaaagtgtgagcacctgactcaccaaacaaacaaattatgagcact---tgacccaccaaacaaacaatccaatagtgagcacttgaccta 54147629  T
Q  97 ccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaatt 154  Q
    ||||||||||||||||||||||||  ||| | ||||||||  |||| |||||||||||    
T  54147628 ccaaacaaacaaaccaattgtgaggactatcttgactcacctaacaaccaaacaaatt 54147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 54640433 - 54640491
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||||||||    
T  54640433 ttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaa 54640491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 33836484 - 33836549
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    |||||||||||||| | ||||||| ||||||||||||  ||||||| |||||||| ||||||||||    
T  33836484 aaaaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 39029059 - 39029213
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg-gagtattgtacgcagtcataccctgtatt-- 286  Q
    ||||||||||| |||| ||| ||| ||||||||||||| ||||||| || ||| | |||||||||||  | ||||||||| ||| | |||||||| ||      
T  39029059 aaaaaagggcatcctg-tgc-ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtttttt 39029156  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| | ||||||||    |||||| ||||||| ||||||||    
T  39029157 acacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaa 39029213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 11394987 - 11394923
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 257  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 11404714 - 11404650
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 257  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 32629366 - 32629418
Alignment:
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||||||||||    
T  32629366 acaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 36816381 - 36816464
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc-atttggagtattgtacgcag 272  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||  |||||||  ||||| |||||||||||||    
T  36816381 aaaaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcag 36816464  T

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Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 7038188 - 7038041
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||||  |||||||| |||||| | |||  ||||||| ||| |||   |||||||||| || |||||||||| |||| |||||| | ||  ||    
T  7038188 aaaagggcaacccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttac 7038090  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgac 338  Q
    |||||| |||||||| |||||||||||| |  ||||||||||||||||||    
T  7038089 acaagaagctgtttc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

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Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 23580302 - 23580360
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||| |||| || |||||||||||  ||||||||||||| |||||||||    
T  23580302 ttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaa 23580360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 317
Target Start/End: Original strand, 30581481 - 30581593
Alignment:
Q  209 cactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttcc 304  Q
    ||||| ||||||  ||||| ||||||| |||||||| ||||||||||| || ||||||||| ||  | |||||||| ||   |||||||||| |||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttcc 30581580  T
Q  305 aggacttgaaccc 317  Q
    | |||||||||||    
T  30581581 acgacttgaaccc 30581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 35532130 - 35532077
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagg 243  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||    
T  35532130 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 254  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| || ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 44718702 - 44718641
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 254  Q
    ||||||||||| ||||  ||| ||||||||||||  |||||||||||||||| |||||||||    
T  44718702 aaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 56323037 - 56322984
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| ||||||||    
T  56323037 aaaaagggcaacccggtgcactaaagctcccgcatatccggggtccgggaaggg 56322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 25343261 - 25343170
Alignment:
Q  254 tttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||||||| | |||||||| ||  ||||||||| || ||||||| ||||||||| |  |||| |||||||| |||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaa 25343170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 55766466 - 55766618
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat-tacaca 291  Q
    |||||||| || ||||||||| ||||| ||||||  || |||| |||| ||| | ||||||||  | ||||||||||||| | |||||||| |  |||||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttacacaca 55766565  T
Q  292 agaggctgtttccaggacttgaa-cccgcaacctttcagtcacatgacaacaa 343  Q
    |||  |||||||||  ||||||| ||||  ||||| | |||||||||||||||    
T  55766566 agaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaa 55766618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 55830721 - 55830873
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat-tacaca 291  Q
    |||||||| |||||||||||| ||||| ||||||  || |||| |||| ||| | ||||||||  | |||||||||||||   |||||||| |  |||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgtttacacaca 55830820  T
Q  292 agaggctgtttccaggacttgaac-ccgcaacctttcagtcacatgacaacaa 343  Q
    |||| |||||||||  |||||||| |||  ||||| |  ||||||||||||||    
T  55830821 agagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaa 55830873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 12711450 - 12711537
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccct 281  Q
    |||||||||  ||||||||| || | |||||||  |  |||||| |||||| |||| |||||||| ||||||||||||||| ||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccct 12711537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 16870620 - 16870561
Alignment:
Q  104 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 163  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  16870620 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 16870561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 316
Target Start/End: Complemental strand, 36589784 - 36589753
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacc 316  Q
    ||||||||||||||||||||||||||||||||    
T  36589784 ttacacaagaggctgtttccaggacttgaacc 36589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    ||||||||||| ||||||||| |||||  |||||  ||||||| |||||||| ||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 3580862 - 3580988
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgtttccaggacttg 312  Q
    ||||||| ||||| ||||||| |||||||| ||| | ||||||| |||||| || ||| | |||| ||  | ||||||||||||   ||||||| |||||    
T  3580862 agctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaagagg---tttccag-acttg 3580957  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| ||  || ||||||||||||||||||||    
T  3580958 aactcgtgacttttcagtcacatgacaacaa 3580988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 8820646 - 8820581
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    |||||||| ||| ||| ||||||| | ||| ||||||  |||||||||||||||| ||||||||||    
T  8820646 aaaaaaggacaatctgatgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24225551 - 24225498
Alignment:
Q  2 caaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtact 55  Q
    |||||||||||| ||| |||||||||  |||||||||| | |||||||||||||    
T  24225551 caaacaaccaaattgtaagcactcgattcaccaaacaaccaaattgtgagtact 24225498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 22122918 - 22123067
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaag 293  Q
    |||||||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 22123017  T
Q  294 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22123018 agactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 22123067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 1217247 - 1217095
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||| |||||||| ||||||||||||| | |||||||| ||||||    
T  1217247 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacac 1217148  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  1217147 aagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaa 1217095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 39203671 - 39203521
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| ||||||||| ||||||||||||| || |||| |||||||| ||||||||||||| ||||||||||||  | |||||||| ||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaa 39203572  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||||||||| |  |||||||||||||||||||||||    
T  39203571 gaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaa 39203521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 193 - 318
Target Start/End: Complemental strand, 31593004 - 31592879
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||  ||||||||||||| ||||||||||||| | |||||||| ||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 31592905  T
Q  293 gaggctgtttccaggacttgaacccg 318  Q
    ||||||||||||||||||||||||||    
T  31592904 gaggctgtttccaggacttgaacccg 31592879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 13628789 - 13628944
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtat--ta 287  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| |  ||    
T  13628789 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctta 13628888  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  13628889 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 13628944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 40272808 - 40272964
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||  | ||    
T  40272808 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 40272907  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| ||||||||||||||||||||   ||||| |||||||||||||||||    
T  40272908 acacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaa 40272964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 13730599 - 13730756
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt- 286  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||| ||||||||| ||| | |||||||| ||     
T  13730599 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttt 13730698  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  13730699 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 13730756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 22609921 - 22609771
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaa 292  Q
    |||||||||| ||||||||  ||||||||||||  || |||| |||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 22609822  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  22609821 gaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaa 22609771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 26869866 - 26869712
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||||||||||| ||||||| | ||||||||||||  || |||| || ||||| ||||||||||||| ||||||||||||| | ||||||| | ||||    
T  26869866 aaaaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttac 26869767  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  26869766 accagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 26869712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 15797381 - 15797271
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattac 288  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||    
T  15797381 taaaaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 15797282  T
Q  289 acaagaggctg 299  Q
    |||||||||||    
T  15797281 acaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 7943150 - 7942995
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||| |||||||  |||||||| ||||||||||||  || ||||||| ||||||||||||||||||  ||||||||||||||| |||||||  | |||    
T  7943150 aaaaaaaggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtttttta 7943051  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     |||||| ||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  7943050 gacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 7942995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 26573287 - 26573132
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||| |||||| |||||||||||| ||||| ||||||  ||||||| |||| ||| |||||||| |||| ||||||||||||| | |||||||| ||  |    
T  26573287 aaaagagggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtttttta 26573188  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  26573187 cacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 26573132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 46421031 - 46421189
Alignment:
Q  190 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    |||||||||||| | |||||||| | ||||||||||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||    
T  46421031 aaaaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 46421130  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  46421131 ttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaa 46421189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 52926216 - 52926362
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattaca 289  Q
    |||||||||||||| ||||| ||| ||||||||||||  ||||||| |||||||  ||||||||||||| ||||||||||||| | |||       ||||    
T  52926216 aaaaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac-------taca 52926308  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 52926362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 12914034 - 12914187
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||||||||| |||||| |  ||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| | | |||||||  | |||||    
T  12914034 aaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttaca 12914133  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||  |  ||||||| ||||||| |||||||    
T  12914134 caagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaa 12914187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 516571 - 516417
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt---ggagtattgtacgcagtcataccctgtatt- 286  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||| ||||||   ||  |||||| ||||| | |||||||| ||     
T  516571 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttt 516472  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
     ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  516471 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 7696893 - 7697037
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaag 293  Q
    ||||| |||| ||||||||||||||||| ||||| ||| ||| ||||||||      |||||||| ||||||||||||| | |||||||| |||||||||    
T  7696893 aagggaaacccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgttttacacaag 7696987  T
Q  294 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  7696988 agactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaa 7697037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 29366719 - 29366874
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--a 287  Q
    ||||||||||||  |||||||| ||||||| ||||  ||||||| |||||||| ||||||||||  ||| ||||||||||||| | |||||||| ||  |    
T  29366719 aaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 29366818  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  29366819 tacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaa 29366874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 8247683 - 8247841
Alignment:
Q  190 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt 286  Q
    |||| |||||||||  ||||||| | ||||||||||||  ||||||| |||||||  ||||||||||  ||| ||||||||||||  | |||||||| ||    
T  8247683 aaaatagggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtttt 8247782  T
Q  287 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
      ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8247783 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 8247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 16735598 - 16735446
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattac-ac 290  Q
    ||||||||||||  |||||||  |||| |||||||  ||| ||| |||||||| ||||||||||||| ||||||||||||| | |||||||| || | ||    
T  16735598 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctac 16735499  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| ||||||||||||||  || || |||||||||||||||||    
T  16735498 aagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaa 16735446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 34420641 - 34420796
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||| ||  |||||||| ||||||| ||||  || |||| |||||||| ||||||||||| || |||| |||||||| | |||||||| ||  |    
T  34420641 aaaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttttta 34420740  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  34420741 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 34420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 6411834 - 6411973
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgtttc 303  Q
    ||||||||| ||||||||||||  || ||||||||||||| ||||| ||||||| ||||||||||||| | ||||||| | ||||||||||||||||||     
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttta 6411933  T
Q  304 caggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || |||||||||||   |||| ||||| ||||||||||||    
T  6411934 caagacttgaacccatgacctatcagttacatgacaacaa 6411973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 10795423 - 10795552
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg--tattac 288  Q
    ||||||||||||||||||||  ||||||||||||  |||||||  ||||||| ||||||||  ||||| ||||||||||||| | |||||||  | ||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 10795522  T
Q  289 acaagaggctgtttccaggacttgaacccg 318  Q
    ||||||||||||||||||||||||||||||    
T  10795523 acaagaggctgtttccaggacttgaacccg 10795552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 34771362 - 34771461
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    |||||||||| || ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||||||    
T  34771362 aaaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 34771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 54484850 - 54484730
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tatta 287  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||| ||   | |||    
T  54484850 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttta 54484751  T
Q  288 cacaagaggctgtttccagga 308  Q
    |||||||||||||||||||||    
T  54484750 cacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 26292489 - 26292382
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    ||||||| ||||| |||||||||||| |||||||||| ||||||  |||||||||||||| ||||||| |||| |||||| ||| |||||||| ||||||    
T  26292489 aaaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgttttacac 26292390  T
Q  291 aagaggct 298  Q
    ||||||||    
T  26292389 aagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 14987116 - 14986989
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--ac 288  Q
    |||||| |||| ||||||||| ||||||||||||| || |||| ||||| || ||||||||||  ||| ||||||||||||| | |||||||| ||  ||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 14987017  T
Q  289 acaagaggctgtttccaggacttgaacc 316  Q
    ||||||||||||||||||||||||||||    
T  14987016 acaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 5173717 - 5173872
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt-a 287  Q
    ||||||||||||| ||||||||| ||||||||||||  || |||| ||||||||  ||||||||||  || |||||| | |||  | |||  ||| || |    
T  5173717 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgttttta 5173816  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  5173817 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 5173872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 53996563 - 53996718
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||| || ||||||||| ||||||| ||||  ||| ||| |||||||| ||||||||||| || |||||||| |||| | |||||||| ||  |    
T  53996563 aaaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttta 53996662  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||||| ||||||||||    
T  53996663 cacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaa 53996718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 54374341 - 54374488
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccc--tgtat 285  Q
    ||||||| |||| ||||||| |||| ||||||||||||| ||||||| |||||||| |||||||| ||||| | ||||||||||| | |||||  | | |    
T  54374341 taaaaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttt 54374440  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcac 333  Q
    ||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  54374441 tacacaagaggttgtttccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 343
Target Start/End: Complemental strand, 9607345 - 9607208
Alignment:
Q  210 actagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttcca 305  Q
    |||| ||||||||||||| | |||||||||||||| ||||| ||||  ||| ||||| ||||||| | |||||||| ||  || ||||||||||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  306 ggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||    |||||||||||||||||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaa 9607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 337
Target Start/End: Complemental strand, 33926224 - 33926094
Alignment:
Q  209 cactagagctcccgcatatacagggtctgggaagggatcccaccatt-tggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccag 306  Q
    ||||| ||||| ||||||| |||||||  ||||||| |||||||||| ||| ||||||||| ||| | |||||||| || |||||||||||| |||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccag 33926125  T
Q  307 gacttgaacccgcaacctttcagtcacatga 337  Q
    |||||||||||   |||||||||||||||||    
T  33926124 gacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 49013469 - 49013589
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctg--ta 284  Q
    ||||||||||||||| ||||||||| ||||||||| ||| | ||||| |||||||| |||||||||  |||| ||||||||||||| | |||||||  |     
T  49013469 taaaaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 49013568  T
Q  285 ttacacaagaggctgtttcca 305  Q
    |||||||||||||||||||||    
T  49013569 ttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 25944630 - 25944474
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggagtattgtacgcagtcataccc--tgtatt 286  Q
    ||||||||||| |||||||| ||| ||||||| ||||  ||||||| |||||||| |||||||| ||||| ||||||||| ||| | | |||  | | ||    
T  25944630 aaaaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagtttttt 25944531  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||| |||||| |||||||||||||||||||   ||||||||||||| |||||||||    
T  25944530 acacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaa 25944474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 30928169 - 30928296
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttg 312  Q
    ||||||| ||||| ||||||| |||||||| |||| ||| |||| ||||| ||| ||  | |||| ||| ||  ||||||||||||||||||||||||||    
T  30928169 agctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttg 30928268  T
Q  313 aacccgcaacctttcagtcacatgacaa 340  Q
    ||||||  ||||||||||||||||||||    
T  30928269 aacccgtgacctttcagtcacatgacaa 30928296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 24577996 - 24577917
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtac 268  Q
    ||||||||||||| | |||||||||||||||||| |||| ||||||||||||| |||||||||||||| | |||||||||    
T  24577996 taaaaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 10870045 - 10870103
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10870045 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10870103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 45620881 - 45620981
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 342  Q
    |||||||| |||| ||||||||||||| | |||||||| ||   |||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  343 a 343  Q
    |    
T  45620981 a 45620981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 4495717 - 4495816
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| ||||||||||||| | |||||||| ||  |||||| ||||| ||| |||||||||||||||  ||||| |||||||||||||||||    
T  4495717 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaa 4495816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 31904857 - 31904975
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggga-tcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    ||||||| |||||||||||| |||||||||| |   | | |||||||||||  ||||||||||||| |||||||||||||||||||||||  | |||||     
T  31904857 aagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttacat 31904956  T
Q  291 aagaggctgtttccaggac 309  Q
    || ||||||||||||||||    
T  31904957 aataggctgtttccaggac 31904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 341
Target Start/End: Complemental strand, 12525567 - 12525414
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    ||||||| ||||||||||||| |  |||||||| ||| ||||||||| ||||||  |||||||||||   || |  | ||||| | |||||||  | |||    
T  12525567 aaaaaagagcaacctggtgcagtgaagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtacttcgcagccttaccctgattttta 12525468  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
    ||||||||||||||||||||||| ||||| |  |||||||||||| ||||||||    
T  12525467 cacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatgacaac 12525414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 45948850 - 45948993
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattacacaagaggctgttt 302  Q
    ||||||||| ||||||||||||  ||||||| | |||||| |||||||| |||| |||||||| |||| | |||||  | | |||||||||||| |||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T
Q  303 ccaggacttgaacccgcaacct---ttcagtcacatgacaacaa 343  Q
    |||||| |||||||||  ||||   ||||||||||||| |||||    
T  45948950 ccaggaattgaacccgtgaccttccttcagtcacatgaaaacaa 45948993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 343
Target Start/End: Complemental strand, 19731147 - 19731007
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctgttt 302  Q
    ||||||||| |||||| ||||| |||| ||||||||| || |||||||| | || ||||||||||||  | |||| ||  | |||||||||||||| |||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctattt 19731048  T
Q  303 ccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| | |||  |||||||| |||| |||||||||    
T  19731047 ccaggacttgcatccgtgacctttcaatcacgtgacaacaa 19731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 30452953 - 30452892
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 253  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  30452953 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 24851298 - 24851366
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 258  Q
    |||||||||||||| ||||||||| ||||||||||||| |||| || |||||||| |||||||||||||    
T  24851298 aaaaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttgg 24851366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 307
Target Start/End: Original strand, 25517169 - 25517287
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattac 288  Q
    |||||||||||| ||||||||| |||||| |||||  |||| || |||||||| ||||||||||| | ||||||||||||| |||| | ||   | ||||    
T  25517169 aaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttac 25517268  T
Q  289 acaagaggctgtttccagg 307  Q
    |||||||| ||||||||||    
T  25517269 acaagaggatgtttccagg 25517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 45786209 - 45786327
Alignment:
Q  188 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg--t 283  Q
    |||| ||||||||||| ||||||||| |||||| ||||   ||||||| |||||||| ||||||||  ||||| ||||||||||||| | |||||||  |    
T  45786209 ctaataaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttt 45786308  T
Q  284 attacacaagaggctgttt 302  Q
     ||||||||||||||||||    
T  45786309 tttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 353351 - 353441
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccctgt 283  Q
    ||||||||| ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||| ||||||||||||| | ||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 353441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 24578086 - 24578007
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtac 268  Q
    ||||||||||||||| |||||||||||| ||||||||||  |||||||||||| |  ||||||||||| | |||||||||    
T  24578086 taaaaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 45139515 - 45139624
Alignment:
Q  232 ggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttc 327  Q
    ||||||||||||| |||||||||||  || |||||||| |||| | |||||||| ||  |||||||||| ||||||||  |||||||||||  |||||||    
T  45139515 ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttc 45139614  T
Q  328 agtcacatga 337  Q
    ||||||||||    
T  45139615 agtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 47624163 - 47624088
Alignment:
Q  228 acagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattacacaagaggctgttt 302  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||||||||||||||    
T  47624163 acagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 54032612 - 54032705
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 337  Q
    |||||||||| || |||||||| |||| | |||||||| ||  |||||||||| |||||||||||||||||||||  ||||| |||||||||||    
T  54032612 tcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 53062119 - 53062043
Alignment:
Q  269 gcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| ||||||||| ||  ||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  53062119 gcagttataccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaa 53062043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 8410889 - 8411016
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttccaggacttgaa 314  Q
    |||| |||| ||| ||||||||| |||| | |||||||| |||| |||||||  |||| | |||||||| ||  ||| ||||| ||||||||||| ||||    
T  8410889 agcttccgcctatgcagggtctgagaagaggtcccaccagttggtgtattgtgagcagccttaccctgttttttacacgaggcagtttccaggacctgaa 8410988  T
Q  315 cccgcaacctttcagtcacatgacaaca 342  Q
    || |  ||||||||||| ||||||||||    
T  8410989 ccggtgacctttcagtcccatgacaaca 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 33235687 - 33235535
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattacac 290  Q
    |||||||||||||||||||| |||| |||||||   | |||||| | |||| ||||||||||| | ||||||||| ||||| |||||||   | ||||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcg-aggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacac 33235589  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttca-gtcacatgacaacaa 343  Q
    |||||||| ||| || || ||||||  |  |||||||| |||||||||||||||    
T  33235588 aagaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaacaa 33235535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 50295631 - 50295443
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaaattgtgagcactagaccaaccaa 100  Q
    |||||||| ||||||  ||| |||| || |||||||||| |||| |||||| |||     ||||||  |||||| |||||||||||||| |||| || ||    
T  50295631 ccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcactcg---actcacgaaacaaccaaattgtgagcacttgacccactaa 50295535  T
Q  101 acaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaacgaaactaaa 192  Q
    |||||||| | ||||||| || ||| |   |||||  ||||| |||||||||||||| |||||  ||| |||| |||||||||  |||||||    
T  50295534 acaaacaatcaaattgtgtgcactatctcaactcatccaacaaccaaacaaattgaaccaaacagaacgaaattaaactgaaccgaactaaa 50295443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 31831343 - 31831241
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||| ||           ||||||||| |||||||| |||| | |||||| | ||||||||    
T  31831343 aaagggcaacccggtgcactagagcacccgcatatgcagggtccgg-----------accatttggtgtattgtatgcagccttaccctattttacacaa 31831255  T
Q  293 gaggctgtttccag 306  Q
    ||||||||||||||    
T  31831254 gaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 39212101 - 39212003
Alignment:
Q  239 gaagggatcccaccatttggagtattgtacgcagtcataccctgta--ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    |||||||||||  ||| ||  ||||||||||||||| |||| |||   |||||||||||| | |||||||||||||||||||  || ||||||||||||    
T  39212101 gaagggatcccgtcatctgatgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacat 39212003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 35417979 - 35417921
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||| |||||| ||  |||| |||||||||||| |||||    
T  35417979 ttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaa 35417921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 6242282 - 6242327
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtc 235  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||    
T  6242282 aaaaaagggcaacccggtgcactagagctcctgcatatgcagggtc 6242327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 52428532 - 52428616
Alignment:
Q  248 ccaccatttggagtattgtacgcagtcataccctgta--ttacacaagaggctgtttccag-gacttgaacccgcaacctttcag 329  Q
    |||| |||||| ||||||||||||| | |||||||||  ||||||||||||||| |||||| ||||| ||||||  |||||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttcag 52428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 55401288 - 55401208
Alignment:
Q  239 gaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacc 316  Q
    |||||| ||||||||||| || ||||| ||||||||| || ||||| ||  |||||||||||||||| |||||||||||||    
T  55401288 gaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 43114882 - 43114994
Alignment:
Q  207 tgcactagagctcccgcatatacaggg-tctgggaagggatcccaccatttggagtattgtacgcagtcat-accctgtatt---acacaagaggctgtt 301  Q
    ||||||| ||||||||||||  ||||| ||  ||||||| ||||||||||||| |||||||| | || | | ||||||| ||   |||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtt 43114980  T
Q  302 tccaggacttgaac 315  Q
    ||||||||||||||    
T  43114981 tccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 47624259 - 47624208
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa 241  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||    
T  47624259 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42530779 - 42530741
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaa 39  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  42530779 ccaaacaaccaaagtgtgagaactcgactcaccaaacaa 42530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 4495672 - 4495709
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcata 226  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  4495672 taaaaaagggcaacccggtgcactaaagctcccgcata 4495709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 9276395 - 9276289
Alignment:
Q  218 tcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggc------tgtttccaggac 309  Q
    |||||||||  ||||||| ||||| || ||| ||||||||| ||||||||||||| | |||||||  | |||||||||||||      ||||||||||||    
T  9276395 tcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgaggttgtttccaggac 9276297  T
Q  310 ttgaaccc 317  Q
    ||||||||    
T  9276296 ttgaaccc 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 10484615 - 10484667
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    |||||||||||| ||||||||| ||||||||||||  |||||||  |||||||    
T  10484615 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggg 10484667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 40390401 - 40390365
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcata 226  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  40390401 aaaaaagggcaacccggtgcactaaagctcccgcata 40390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 21779260 - 21779411
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||  | |||||||| |||||||    
T  21779260 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacaca 21779359  T
Q  292 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaa 21779411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 23397899 - 23397749
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||| |||||||||||||||||||||||  |||||| | |||||| ||||||||||||| |||||||||| || | |||||| | ||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacacaa 23397800  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||    
T  23397799 gaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 23397749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 9671315 - 9671163
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||    
T  9671315 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 9671216  T
Q  292 agaggctgtttccaggacttgaacccgcaaccttt-cagtcacatgacaacaa 343  Q
    ||||||||||||||||| |||||||||  || ||| |||||||||||||||||    
T  9671215 agaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaa 9671163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 8455315 - 8455468
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattaca 289  Q
    |||||||||||| ||||||||| |||||| |||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||  ||| |||||    
T  8455315 aaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttaca 8455414  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  8455415 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 8455468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 335
Target Start/End: Complemental strand, 14444866 - 14444720
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| |||| |||| ||| | ||||||| | ||||    
T  14444866 aaaaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttac 14444767  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||    
T  14444766 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 25249735 - 25249889
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat-tac 288  Q
    |||||||||||||| ||||||||| ||||| ||||||  ||||||  |||||||||||||||||||||| ||||||||||||| | |||||||| | |||    
T  25249735 aaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtac 25249834  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| ||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  25249835 acaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaa 25249889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 10543835 - 10543681
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||||  || ||||||||||||| | |||||||| ||  ||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10543681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 190 - 335
Target Start/End: Complemental strand, 10546301 - 10546153
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tatt 286  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||   | ||    
T  10546301 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttt 10546202  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    | |||||||| |||||||||||||||||||||  |||||||||||||||    
T  10546201 atacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 14530455 - 14530301
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||| |||||||||| || | |||||||| ||  |     
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttat 14530356  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  14530355 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 14530301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 11514571 - 11514419
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    |||||||||| | ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||| | |||  ||  | |||||    
T  11514571 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttaca 11514473  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||    
T  11514472 caagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaa 11514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 24200622 - 24200777
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--a 287  Q
    |||||||||||| ||||||||| ||||| | ||||  ||||||| |||||||| |||||||||||  || ||||||||||||| | |||||||| ||  |    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttta 24200721  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  24200722 cacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaa 24200777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 12023955 - 12024070
Alignment:
Q  229 cagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggacttgaacccgcaacctttc 327  Q
    ||||||| |||| ||| ||||||||||||| ||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||  |||||||    
T  12023955 cagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12024054  T
Q  328 agtcacatgacaacaa 343  Q
    ||||||||||||||||    
T  12024055 agtcacatgacaacaa 12024070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 19977710 - 19977866
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtatt 286  Q
    |||||||||| || ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||||| ||||||||||||  | || ||  | | ||    
T  19977710 taaaaaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatttttt 19977809  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| |||||||||||||||| |||||||||||  ||||||| |||||||||||||||    
T  19977810 acaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaa 19977866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 343
Target Start/End: Original strand, 99281 - 99415
Alignment:
Q  209 cactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttccagga 308  Q
    ||||| |||||||||||| |||||||||| |||||| | ||||||||||| ||||||||||||| | | || ||| ||  ||||||||||||||| ||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttctagga 99380  T
Q  309 cttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||  ||||||||||||| |||||||||    
T  99381 cttgaacccgtgacctttcagtcacgtgacaacaa 99415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 17668142 - 17667985
Alignment:
Q  188 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tat 285  Q
    |||||||||||||||| ||||||||| |||||||  |||  ||||||  | |||||| | ||||||||||| ||||||||||||| | |||||||  | |    
T  17668142 ctaaaaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttt 17668043  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| | |||||||||||||||||||  ||||| |||||||||||||||||    
T  17668042 tacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaa 17667985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 36871629 - 36871509
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-ac 288  Q
    |||||||||||||| ||||||||| ||||||||||||  |||| || |||||||| ||||||||||||| ||||||||||||| | |||||||| || ||    
T  36871629 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcac 36871531  T
Q  289 acaagaggctgtttccaggact 310  Q
    ||||||||||||||||||||||    
T  36871530 acaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 329
Target Start/End: Original strand, 32781298 - 32781426
Alignment:
Q  202 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaagaggctg 299  Q
    |||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||  | |||||||||||| ||    
T  32781298 cctggtgcacaa-agctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  300 tttccaggacttgaacccgcaacctttcag 329  Q
    |||||  ||||||||| ||  |||||||||    
T  32781397 tttccgagacttgaactcgtgacctttcag 32781426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 27573757 - 27573604
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat-taca 289  Q
    ||||||||||||| | ||||||| ||||||| |||| ||||||| ||||||  | | ||||||||||| ||||||||||||| | |||| ||| | ||||    
T  27573757 aaaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttataca 27573658  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| || |||||||||||    |||||||||||||||||||||||    
T  27573657 caagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaa 27573604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 7214674 - 7214517
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg--gagtattgtacgcagtcataccctgtatt- 286  Q
    |||||| ||||||||||||||||| | ||| ||||||  ||| ||| | ||||||||| ||||||||   | ||||||||||||| | |||||||||||     
T  7214674 aaaaaaaggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattt 7214575  T
Q  287 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||||||| ||||||||| |||||||||||   |||||||||||||||||||||||    
T  7214574 tacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaa 7214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 22371154 - 22371040
Alignment:
Q  228 acagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagaggctgtttccaggacttgaacccgcaacctttc 327  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| ||  ||| ||||||||||||||||||||||||||  ||||  |    
T  22371154 acagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacgaggctgtttccaggacttgaacccgtgacctccc 22371056  T
Q  328 agtcacatgacaacaa 343  Q
    ||||||||||||||||    
T  22371055 agtcacatgacaacaa 22371040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 17623704 - 17623547
Alignment:
Q  188 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tat 285  Q
    ||||||||||||||||  |||||||| |||| || ||||  |||| |  |||||||| | ||||||||||| ||||||||||||| | |||||||  | |    
T  17623704 ctaaaaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttt 17623605  T
Q  286 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||| |||||| ||||||||||||||  ||||| ||||| |||||||||||    
T  17623604 tacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaa 17623547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 5841166 - 5841011
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggagtattgtacgcagtcataccc--tgtatta 287  Q
    |||||||||||  ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||  ||||||||||||  | |||||  | | |||    
T  5841166 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttttta 5841067  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||| |||||||||| ||||||||||||||  ||||| |||||||||||||||||    
T  5841066 cacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaa 5841011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1173577 - 1173765
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaaattgtgagcactagaccaaccaa 100  Q
    ||||||||||||| | |||| ||||||| |||||||||||| |||| |||| |||     || |||| |||||  ||||| |||||||| |||| |||||    
T  1173577 ccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaattatgagcactcg---acccaccaaacaaacaaattatgagcacttgacccaccaa 1173673  T
Q  101 a----caaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaacgaaac 188  Q
    |    |||||||||||||| ||||  ||| | ||||||||  |||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  1173674 acaaacaaacaaaccaattttgagaactatcttgactcacctaacaaccaaacaaatttaatcaaacgaaaccaaatcaaactgaaccaaac 1173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 25079717 - 25079870
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattaca 289  Q
    ||||||||||| ||||||||| |||||  |||||  ||||||| |||||||| |||||||||| || ||||||||||||  | |||| ||   | |||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttaca 25079816  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| |||||| | ||||||||||||  ||||| |||||||||||||||||    
T  25079817 caagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaa 25079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 14544201 - 14544046
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggag--tattgtacgcagtcataccctgtatt---a 287  Q
    |||||||||| |||||||||| ||||||||||||  |||||||  ||||||| ||| |||||||   |  ||||| |||||||| |||||||| ||   |    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttcta 14544102  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||| || || ||| | ||||||||||||||||||||||||    
T  14544101 cacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaa 14544046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 24859985 - 24860138
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattac 288  Q
    |||||| ||||| | ||||||||| ||||||||||||  ||||||| | |||||| | | ||||||||| ||||||||||||| | |||| || | ||||    
T  24859985 aaaaaaaggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag-cctaccatgtttttac 24860083  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || ||||| |||||||||| ||| |||||| |||||| |||||||||||||||||    
T  24860084 accagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaa 24860138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 30826173 - 30826052
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccct-gtattac 288  Q
    |||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||| | ||||||||||| ||||||||||||  | ||||||  | ||||    
T  30826173 aaaaaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaaggg-ttccaccatttggtgtattgtacgcaaccttaccctatttttac 30826075  T
Q  289 acaagaggctgtttccaggactt 311  Q
    ||||||||||||||||| |||||    
T  30826074 acaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 17896397 - 17896242
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt---a 287  Q
    ||||||||||||  | ||||||| ||||||| ||||  ||||||| | |||||| |||||||||||||  |||||||||||| | |||||| | ||   |    
T  17896397 aaaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctattttttta 17896298  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| |||||| |||||||||| |||  ||||||| |||||||||||||||    
T  17896297 cacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaa 17896242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 341
Target Start/End: Complemental strand, 25641639 - 25641487
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-ac 288  Q
    |||||||| ||| | ||| ||||| ||||| ||||||  |||| |  |||||||| |||||| |||||| ||||||||||||    |||||||| || ||    
T  25641639 aaaaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcac 25641540  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 341  Q
    |||| | |||||||||||||||||||||||  |||||||||||||||||||||    
T  25641539 acaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 39914305 - 39914458
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt---ac 288  Q
    |||||||||||| | ||||||| ||||||||||||  ||||||| || ||||| |||||||||| || ||||||||| ||  | |||||||| ||   ||    
T  39914305 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttac 39914403  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| ||||||||| |||||| ||||  ||||| |||||||||||||||||    
T  39914404 acaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaa 39914458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 21377095 - 21377225
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttg 312  Q
    ||||||| ||||  ||||||  |||||||| ||||||||||||| | ||||||| ||| | |||||||| ||  |||||||||| |||||| | ||||||    
T  21377095 agctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttg 21377194  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| || ||||||||||||||||||||||||    
T  21377195 aactcgtaacctttcagtcacatgacaacaa 21377225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 5450376 - 5450268
Alignment:
Q  238 ggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 334  Q
    ||||||| ||||||| ||||| ||||||||||||| | |||| ||| ||   |||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcaca 5450277  T
Q  335 tgacaacaa 343  Q
    |||||||||    
T  5450276 tgacaacaa 5450268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 33795398 - 33795268
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagta-ttgtacgcagtcataccctg--tattacacaagaggctgtttccaggactt 311  Q
    |||||||||||| ||||||||||||||||| |||||||| | || ||| |||||||||| | |||||||  | |||| ||||||| ||||||| ||||||    
T  33795398 agctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggactt 33795300  T
Q  312 gaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||  |||||||| |||| |||||||||    
T  33795299 gaacccgtgacctttcaatcacgtgacaacaa 33795268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 31158437 - 31158593
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggagtattgtacgcagtcataccctg--tatt 286  Q
    ||||||| ||| | |||| |||| ||||||||||||  |||||||||||||||| ||||||||  |||||  ||||||| ||| || |||||||  | ||    
T  31158437 aaaaaggacaatcaggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttttt 31158536  T
Q  287 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    || |||||||||||||  | ||||| |||||   |||||||||||||||||||||||    
T  31158537 acgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaa 31158593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 192 - 337
Target Start/End: Complemental strand, 44643659 - 44643511
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg---tattac 288  Q
    ||||||||| || |||||||||  |||||||||||  |||||||||||||||| |||||||||||||   ||||||||||| | ||| |||   | ||||    
T  44643659 aaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttac 44643560  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 337  Q
      |||||||| |||| || |||||||| ||  |||||||||||||||||    
T  44643559 ggaagaggctctttctagaacttgaacacgtgacctttcagtcacatga 44643511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 343
Target Start/End: Original strand, 40416871 - 40417023
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acac 290  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||||    || || ||||| || |||| ||||||||| ||| | | |||||| ||  | ||    
T  40416871 aaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatac 40416970  T
Q  291 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||| |||||||| ||||||||||||  ||||| |||||||||||||||||    
T  40416971 aagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaa 40417023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 40762234 - 40762349
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtattacac 290  Q
    ||||||||||| ||||||||| ||||||| ||||  |||||||  |||| || ||||||||||||| |||||||||| || | |||||  | | ||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacac 40762333  T
Q  291 aagaggctgtttccag 306  Q
    ||||||||||||||||    
T  40762334 aagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 15296403 - 15296533
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt-- 286  Q
    ||||||||||| ||||| |||| | |||| || ||||  ||||||| | ||||||||||||| |||| ||  |||||||||||| | |||||||||||      
T  15296403 aaaaaagggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtatttt 15296502  T
Q  287 acacaagaggctgtttccaggacttgaaccc 317  Q
    |||||| ||||||||||| ||||||||||||    
T  15296503 acacaacaggctgtttccgggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 17380259 - 17380388
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtat-tacacaagaggctgtttccaggacttga 313  Q
    |||||||||||   |||||||  ||||||| | ||| ||||||| |||||| || ||  | |||||||| | ||||||||||| |||||||| |||||||    
T  17380259 agctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttga 17380358  T
Q  314 acccgcaacctttcagtcacatgacaacaa 343  Q
    |||||  ||||||| |||||||||||||||    
T  17380359 acccgtgacctttcggtcacatgacaacaa 17380388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 19615059 - 19614981
Alignment:
Q  261 tattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 337  Q
    |||||||||||||| |||||||| ||  | |||||||| |||||| ||||||||||||||  |||||||||||||||||    
T  19615059 tattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 25632644 - 25632565
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||||||||| ||||||||| ||||||||||||   | |||  ||||||| |||||||||||||| |||||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcag 25632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 343
Target Start/End: Original strand, 4516354 - 4516503
Alignment:
Q  196 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacacaag 293  Q
    ||||| || ||| ||||| |||| || ||||  ||||||| |||||||| |||||||| |||| |||||||||||||   | |||||  | |||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  294 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| || |||||||   |  ||||||||||||| |||||||||    
T  4516454 aggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaa 4516503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 17705536 - 17705478
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||| ||||||||||||||||||||  |||||  ||||||||||||||||    
T  17705536 ttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 17705478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 44604895 - 44604837
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| ||||||||||||||||||| |  ||||| |||||||||||||||||    
T  44604895 ttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaa 44604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 23145736 - 23145840
Alignment:
Q  231 gggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttca 328  Q
    ||||| ||||| || |||||||| |||| ||||||||||||| | ||| |||| ||  ||||||||| |||||| || ||||||||||||  ||||||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T
Q  329 gtcac 333  Q
    |||||    
T  23145836 gtcac 23145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 23557526 - 23557630
Alignment:
Q  231 gggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccgcaacctttca 328  Q
    ||||| ||||| || |||||||| |||| ||||||||||||| | ||| |||| ||  ||||||||| |||||| || ||||||||||||  ||||||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T
Q  329 gtcac 333  Q
    |||||    
T  23557626 gtcac 23557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 34080237 - 34080176
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 253  Q
    |||||||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||||||    
T  34080237 aaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 254  Q
    |||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 41410000 - 41409936
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 254  Q
    |||| ||||||||| ||||||||  ||||||||||||| ||||||| |||||||| |||||||||    
T  41410000 aaaagagggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 13245096 - 13245210
Alignment:
Q  194 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaag 293  Q
    |||||||||| | | ||||| |||||||| |||| || |||| |||||||| ||||||||||| | ||| ||||||||| | ||||       |||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc-------acacaag 13245188  T
Q  294 aggctgtttccaggacttgaac 315  Q
    ||| ||||||||||||||||||    
T  13245189 aggttgtttccaggacttgaac 13245210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38584196 - 38584247
Alignment:
Q  1 ccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 52  Q
    ||||||||||||| |||||||||||||| |||||||||| | ||||||||||    
T  38584196 ccaaacaaccaaaatgtgagcactcgactcaccaaacaagcaaattgtgagt 38584247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 4794945 - 4794872
Alignment:
Q  185 aaactaaaaaaggg-caacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 258  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| |||| || |||||||| ||||| |||||||    
T  4794945 aaactataaaagggacaacctg-tgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatttgg 4794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 29419983 - 29420041
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||||| |||||||||||||||||| ||  ||||||||||||  |||||||||    
T  29419983 ttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaa 29420041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 39189501 - 39189555
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    |||||| ||||||| ||||||||||||||||||||||| | ||||| ||||||||    
T  39189501 aaaaaaaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 23488619 - 23488555
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||| |||||| ||||||||| ||||| ||||||  ||||||| |||||||| |||||||||||    
T  23488619 aaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 34766394 - 34766330
Alignment:
Q  189 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 253  Q
    |||||||||| |||| | ||||||| ||||||||||||  ||||||| |||||||| ||||||||    
T  34766394 taaaaaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 38584256 - 38584344
Alignment:
Q  92 accaaccaaacaaacaaaccaa-ttgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaact 179  Q
    ||||| ||||| |||||||||| |||||||| |||   |||||||| ||||| |||||||||||||| ||||| ||||| ||| |||||    
T  38584256 accaaacaaacgaacaaaccaaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaactaaaccgaataaaact 38584344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 8576030 - 8575979
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 244  Q
    ||||||||||||||||||||| ||||||| ||||  ||||||| ||||||||    
T  8576030 aaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggg 8575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 8986182 - 8986123
Alignment:
Q  104 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 163  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  8986182 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 8986123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 44521395 - 44521525
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttg 312  Q
    |||||||| |||| ||  |||||||||||| |||| |||||||| ||||| || |||| | |||| ||| ||  |||||||||  |||||||| || |||    
T  44521395 agctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttg 44521494  T
Q  313 aacccgcaacctttcagtcacatgacaacaa 343  Q
    ||| ||  ||||||||||||| ||| |||||    
T  44521495 aacgcgtgacctttcagtcacgtgataacaa 44521525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 17471673 - 17471558
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggagtattgtacgcagtcataccctgtatt---acacaagaggctgt 300  Q
    ||||||||| | ||||||||||  ||||||| |||||||| || || ||||| ||  |||||||||||||| || ||||| ||   ||||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgt 17471574  T
Q  301 ttccaggacttgaacc 316  Q
    |||   ||||||||||    
T  17471573 ttctgagacttgaacc 17471558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 22371248 - 22371199
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa 241  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||    
T  22371248 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 30864439 - 30864536
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt-acacaagaggctgtttccaggactt 311  Q
    |||| |||||||  |||||| |||||| |||||  |||||||||  |||||||||||  | |||||| | || ||||||||||||||||||| |||||    
T  30864439 agcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggctgtttccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 31523353 - 31523296
Alignment:
Q  206 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtat 263  Q
    |||||||| ||||||||||||| |||||| |||||| || | ||||||||||| ||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 39499240 - 39499309
Alignment:
Q  203 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    ||||||||||| ||||||||||||  |||| |  |  ||||||||||||||||||  |||||||||||||    
T  39499240 ctggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcag 39499309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 332
Target Start/End: Original strand, 2003592 - 2003678
Alignment:
Q  249 caccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtca 332  Q
    |||||||||  ||||||||||||  | |||||||| ||   || |||| |||||||||||||||||| |||||  ||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtca 2003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 32290598 - 32290558
Alignment:
Q  7 aaccaaagtgtgagcactcgacccaccaaacaaaccaattg 47  Q
    ||||||| |||||||||| |||||||||||||||| |||||    
T  32290598 aaccaaattgtgagcacttgacccaccaaacaaacaaattg 32290558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 32290644 - 32290584
Alignment:
Q  61 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagc 121  Q
    ||||||| |||||| |||||||||||||| |||| |||||| ||| || | ||||||||||    
T  32290644 actcaccaaacaaccaaattgtgagcacttgacccaccaaaaaaataaccaaattgtgagc 32290584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 10052 - 10200
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaaga 294  Q
    ||||||||| |||||||| ||||||| |||||| ||||||| |||||||| |||||| |||||| ||||||||||||||| ||| |||| ||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaaga 10151  T
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  10152 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 20380 - 20528
Alignment:
Q  195 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaaga 294  Q
    ||||||||| |||||||| ||||||| |||||| ||||||| |||||||| |||||| |||||| ||||||||||||||| ||| |||| ||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaaga 20479  T
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20480 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 20528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 193 - 335
Target Start/End: Complemental strand, 11264 - 11122
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaa 292  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||||| |||||||| |||| | |||  ||| ||||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaa 11165  T
Q  293 gaggctgtttccaggacttgaacccgcaacctttcagtcacat 335  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  11164 gaggctgtttccaggacttgaacccgtgacctttcagtcacat 11122  T

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Target: scaffold0015 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 192 - 317
Target Start/End: Original strand, 48633 - 48758
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacaca 291  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||||| | |||||||| |||||||    
T  48633 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 48732  T
Q  292 agaggctgtttccaggacttgaaccc 317  Q
    ||||||||||||||  ||||||||||    
T  48733 agaggctgtttccaccacttgaaccc 48758  T

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Target: scaffold0258 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 13022 - 13175
Alignment:
Q  191 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg-tattaca 289  Q
    ||||||||||||| ||||||||| ||| ||||||||  |||||||||||||||| |||||||||| || ||||||||||||| | |||| || | ||||     
T  13022 aaaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacg 13121  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  13122 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaa 13175  T

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Target: scaffold0049 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 193 - 340
Target Start/End: Complemental strand, 59114 - 58963
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggagtattgtacgcagtcataccctgtatt--ac 288  Q
    ||||||||||| | ||||||| ||||||||||||  ||| |||||||||||| |||||||||||  || ||||||||||||||| |||||||| ||  |     
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttat 59015  T
Q  289 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  59014 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 58963  T

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Target: scaffold1176 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 343
Target Start/End: Original strand, 1591 - 1737
Alignment:
Q  197 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtattacacaagagg 296  Q
    ||||||||||||||||| ||||||||||||  | ||||| |||||||| ||||| ||||||| |||||||| |||| | || ||||| ||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttttacacaagagg 1690  T
Q  297 ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
     ||||| ||||||||||||||   |||||||||||||||||||||||    
T  1691 ttgttttcaggacttgaacccatgacctttcagtcacatgacaacaa 1737  T

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Target: scaffold0057 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 46969 - 46814
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc--tgtatta 287  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| ||||||||||||  | |||||  | | |||    
T  46969 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttta 46870  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||| ||||||||| |||||||||||  |||||  ||||||||||||||||    
T  46869 cacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaa 46814  T

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Target: scaffold0057; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 24769 - 24919
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tatta 287  Q
    |||||||||||||| | ||||||| ||||||||||||  ||||||  |||||||| ||||||||||||| || |||||||||| | |||||||  | |||    
T  24769 aaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtttttta 24868  T
Q  288 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||     |||||||||||   |||||||||||||||||||||||    
T  24869 cacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaa 24919  T

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Target: scaffold0057; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 43794 - 43672
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa-gggatcccaccatttggagtattgtacgcagtcataccctgtattacac 290  Q
    |||||||||||   |||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||| ||||||||||||| | |||| ||| ||||||    
T  43794 aaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacac 43695  T
Q  291 aagaggctgtttccaggacttga 313  Q
    |||| ||||||||||| ||||||    
T  43694 aagacgctgtttccagaacttga 43672  T

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Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 46702 - 46770
Alignment:
Q  188 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 256  Q
    ||||||| ||||| |||| |||| || ||||||||||||  |||||||||||||||| |||||||||||    
T  46702 ctaaaaatgggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 10946 - 10793
Alignment:
Q  192 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattaca 289  Q
    ||||| ||||||  |||||||| ||||||||||||  ||||||| |||||||| ||||||||||||| |||||| |||||| | |||||||  | |||||    
T  10946 aaaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttaca 10847  T
Q  290 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||| ||||| |||  ||||||||||  ||||| |||||||||||||||||    
T  10846 caagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaa 10793  T

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Target: scaffold0180 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 24130 - 24212
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcag 272  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||    
T  24130 aaaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 24212  T

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Target: scaffold0254 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 343
Target Start/End: Complemental strand, 4264 - 4140
Alignment:
Q  224 atatacagggtctgggaagggatcccaccattt---ggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttgaacccg 318  Q
    ||||| |||||| |||||||| |||||||| ||   || ||||||||||||  | || ||||||||  |||||||||| |||||||||||||||||||||    
T  4264 atatatagggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccg 4165  T
Q  319 caacctttcagtcacatgacaacaa 343  Q
      ||||||||||||||| |||||||    
T  4164 tgacctttcagtcacataacaacaa 4140  T

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Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 35070 - 35167
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    ||||||||||||| ||||||||||||| | |||||||| ||   ||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||    
T  35070 tcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaa 35167  T

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Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 72867 - 72995
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctg--tattacac 290  Q
    ||||||||||||||||||||| ||||||||||||  |||| || |||||||| | | ||||||||| |||||||| |||| | |||| ||  | ||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacac 72966  T
Q  291 aagaggc-tgtttccaggacttgaacccg 318  Q
    ||||| | |||||| ||||||||||||||    
T  72967 aagagacttgtttctaggacttgaacccg 72995  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 226458 - 226558
Alignment:
Q  246 tcccaccatttggagtattgtacgcagtcataccctgtatt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 342  Q
    ||||||||||||  |||||||| |||| | |||||||| ||   | ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  226458 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 226557  T
Q  343 a 343  Q
    |    
T  226558 a 226558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 23712 - 23590
Alignment:
Q  215 agctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgtttccaggacttg 312  Q
    ||||||| ||||  || ||||||||||||| ||||||||||||    ||||||||||| |  ||||||| ||  |||||||||| ||||| || ||||||    
T  23712 agctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttg 23613  T
Q  313 aacccgcaacctttcagtcacat 335  Q
    |||||| | ||||||||||||||    
T  23612 aacccgtaccctttcagtcacat 23590  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 83903 - 83858
Alignment:
Q  298 tgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaa 83858  T

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Target: scaffold0954 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 3667 - 3560
Alignment:
Q  205 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccctgtatt--acacaagaggctgttt 302  Q
    ||||||||| |||| |||||||  ||||||  |||||||| ||||| |||| || ||||| ||||||| | |||| | ||||  |||||||||||| |||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctcttt 3568  T
Q  303 ccaggact 310  Q
    ||||||||    
T  3567 ccaggact 3560  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 24695 - 24647
Alignment:
Q  295 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||    
T  24695 ggctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaa 24647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 24786 - 24696
Alignment:
Q  190 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggagtattgtacgcagtcataccc 280  Q
    |||||||||||| | ||||||||  |||||||| |||  |||||||||| |||||   |||| |||||| ||||| ||||||||| |||||    
T  24786 aaaaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 43170 - 43115
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 340  Q
    ||||||||||||||||||| ||||| ||||| ||  |||||||| |||||||||||    
T  43170 ttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaa 43115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 8932 - 8874
Alignment:
Q  285 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 343  Q
    |||||||||| | ||||||||||| ||||||| |  ||||| |||||||||||||||||    
T  8932 ttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaa 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 58630 - 58691
Alignment:
Q  193 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 255  Q
    |||||||| |||||||||| |||||||||||||| |||||||| | |||||| || |||||||    
T  58630 aaagggcagcctggtgcac-agagctcccgcatacacagggtccgagaaggggtctcaccatt 58691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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