View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17087_high_33 (Length: 343)

Name: NF17087_high_33
Description: NF17087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17087_high_33
NF17087_high_33
[»] chr2 (63 HSPs)
chr2 (1-343)||(43943717-43944059)
chr2 (1-294)||(28342551-28342841)
chr2 (1-343)||(41004556-41004894)
chr2 (1-298)||(9659806-9660100)
chr2 (36-317)||(41181474-41181752)
chr2 (2-298)||(24601668-24601962)
chr2 (2-298)||(24612152-24612446)
chr2 (36-298)||(41052685-41052944)
chr2 (1-298)||(82014-82307)
chr2 (1-273)||(25184606-25184875)
chr2 (57-343)||(12905606-12905887)
chr2 (36-298)||(1096632-1096892)
chr2 (76-298)||(439574-439792)
chr2 (56-317)||(45479552-45479811)
chr2 (1-317)||(24753755-24754069)
chr2 (1-298)||(7267194-7267489)
chr2 (1-280)||(3795365-3795641)
chr2 (1-283)||(10825246-10825526)
chr2 (76-283)||(39950936-39951141)
chr2 (1-298)||(41564240-41564537)
chr2 (83-283)||(32952840-32953038)
chr2 (36-292)||(39798194-39798449)
chr2 (8-298)||(5351481-5351770)
chr2 (1-298)||(18000260-18000556)
chr2 (116-298)||(38950316-38950496)
chr2 (4-283)||(29397941-29398213)
chr2 (31-298)||(209042-209308)
chr2 (36-298)||(10620036-10620297)
chr2 (184-298)||(3206956-3207070)
chr2 (1-183)||(7189818-7189996)
chr2 (119-281)||(25613349-25613508)
chr2 (1-50)||(43982227-43982276)
chr2 (1-49)||(17424160-17424208)
chr2 (1-53)||(23346808-23346860)
chr2 (1-52)||(22003395-22003446)
chr2 (1-52)||(28477061-28477112)
chr2 (1-52)||(35490708-35490759)
chr2 (1-52)||(41183218-41183269)
chr2 (1-51)||(3943187-3943237)
chr2 (1-51)||(28468669-28468719)
chr2 (2-47)||(12908428-12908473)
chr2 (1-49)||(10365789-10365837)
chr2 (1-53)||(23347321-23347373)
chr2 (1-49)||(41500231-41500279)
chr2 (7-51)||(43536136-43536180)
chr2 (1-52)||(14456530-14456581)
chr2 (8-51)||(30493394-30493437)
chr2 (1-51)||(27276369-27276419)
chr2 (1-51)||(32956338-32956388)
chr2 (1-47)||(34921758-34921804)
chr2 (1-51)||(43258728-43258778)
chr2 (1-47)||(43491137-43491183)
chr2 (1-51)||(44100793-44100843)
chr2 (1-50)||(3937848-3937897)
chr2 (4-49)||(29093825-29093870)
chr2 (1-50)||(30273146-30273195)
chr2 (1-50)||(33222644-33222693)
chr2 (1-50)||(41053627-41053676)
chr2 (315-343)||(1150746-1150774)
chr2 (3-51)||(7263047-7263095)
chr2 (315-343)||(28342852-28342880)
chr2 (1-49)||(31974244-31974292)
chr2 (1-49)||(42499814-42499862)
[»] chr4 (56 HSPs)
chr4 (1-298)||(44050843-44051137)
chr4 (3-317)||(38460456-38460767)
chr4 (8-317)||(10423139-10423444)
chr4 (36-343)||(4774319-4774623)
chr4 (48-343)||(18578697-18578990)
chr4 (36-298)||(37394967-37395227)
chr4 (52-343)||(51642096-51642374)
chr4 (1-278)||(51492099-51492374)
chr4 (1-298)||(3407989-3408285)
chr4 (36-294)||(50904917-50905170)
chr4 (1-280)||(15995750-15996026)
chr4 (1-280)||(19069215-19069491)
chr4 (36-283)||(50278588-50278834)
chr4 (6-283)||(37015931-37016206)
chr4 (1-298)||(49563868-49564165)
chr4 (76-278)||(44674241-44674440)
chr4 (209-343)||(24415392-24415526)
chr4 (175-317)||(10374239-10374381)
chr4 (5-213)||(24414867-24415072)
chr4 (113-343)||(6186786-6187016)
chr4 (96-343)||(30043138-30043381)
chr4 (1-51)||(21022883-21022933)
chr4 (1-49)||(6178107-6178155)
chr4 (1-49)||(9890022-9890070)
chr4 (1-53)||(16984154-16984206)
chr4 (1-49)||(49094112-49094160)
chr4 (1-51)||(33051647-33051698)
chr4 (1-52)||(37563274-37563325)
chr4 (1-52)||(39773432-39773483)
chr4 (1-52)||(54634009-54634060)
chr4 (1-48)||(55407791-55407838)
chr4 (1-51)||(15999794-15999844)
chr4 (1-51)||(30726736-30726786)
chr4 (1-51)||(31425313-31425363)
chr4 (1-51)||(40358275-40358325)
chr4 (1-46)||(11494571-11494616)
chr4 (3-52)||(39590562-39590611)
chr4 (5-49)||(958591-958635)
chr4 (1-49)||(41795353-41795401)
chr4 (1-49)||(44561327-44561375)
chr4 (1-49)||(55793948-55793996)
chr4 (1-49)||(56138280-56138328)
chr4 (8-51)||(26932619-26932662)
chr4 (1-51)||(1089579-1089629)
chr4 (1-43)||(20208538-20208580)
chr4 (1-51)||(26792239-26792289)
chr4 (1-51)||(49169092-49169142)
chr4 (1-46)||(955820-955865)
chr4 (4-49)||(1041966-1042011)
chr4 (1-46)||(19073655-19073700)
chr4 (1-46)||(29700302-29700347)
chr4 (1-46)||(34151642-34151687)
chr4 (1-53)||(16983550-16983602)
chr4 (6-50)||(21018067-21018111)
chr4 (1-49)||(41793392-41793440)
chr4 (76-132)||(44795134-44795189)
[»] chr7 (41 HSPs)
chr7 (4-317)||(34622530-34622840)
chr7 (4-298)||(19044324-19044615)
chr7 (4-298)||(20710021-20710312)
chr7 (1-343)||(10705276-10705615)
chr7 (50-343)||(12111277-12111583)
chr7 (4-276)||(34742168-34742437)
chr7 (1-298)||(603807-604102)
chr7 (36-317)||(47742720-47742999)
chr7 (36-282)||(40928719-40928963)
chr7 (36-298)||(15070100-15070361)
chr7 (4-273)||(29592574-29592841)
chr7 (59-298)||(18109543-18109781)
chr7 (76-283)||(17838400-17838605)
chr7 (36-283)||(5537909-5538152)
chr7 (1-298)||(30790756-30791053)
chr7 (1-298)||(45767610-45767906)
chr7 (18-283)||(13323480-13323743)
chr7 (36-298)||(42503588-42503849)
chr7 (36-298)||(43619742-43620003)
chr7 (197-283)||(10522280-10522366)
chr7 (208-298)||(47065058-47065148)
chr7 (36-130)||(36186416-36186509)
chr7 (2-51)||(47776361-47776410)
chr7 (3-49)||(42682024-42682070)
chr7 (1-50)||(9367720-9367769)
chr7 (4-52)||(17840884-17840932)
chr7 (1-49)||(30355236-30355284)
chr7 (1-52)||(15070383-15070434)
chr7 (1-52)||(18105401-18105452)
chr7 (2-51)||(34738393-34738442)
chr7 (6-51)||(35606822-35606867)
chr7 (4-49)||(42499440-42499485)
chr7 (1-52)||(10098111-10098162)
chr7 (1-51)||(15074223-15074273)
chr7 (1-51)||(17834515-17834565)
chr7 (1-51)||(41884121-41884171)
chr7 (1-47)||(47060954-47061000)
chr7 (1-49)||(9365707-9365755)
chr7 (1-49)||(10098394-10098442)
chr7 (2-50)||(13645338-13645386)
chr7 (1-49)||(19072465-19072513)
[»] chr5 (57 HSPs)
chr5 (1-298)||(25877649-25877941)
chr5 (5-317)||(33994880-33995189)
chr5 (36-340)||(24053217-24053518)
chr5 (1-294)||(34122552-34122843)
chr5 (1-340)||(24050055-24050391)
chr5 (90-317)||(7796694-7796919)
chr5 (4-317)||(25890025-25890336)
chr5 (1-298)||(37814610-37814905)
chr5 (36-317)||(34079862-34080141)
chr5 (1-298)||(7017540-7017834)
chr5 (36-317)||(27863466-27863745)
chr5 (31-283)||(38407205-38407454)
chr5 (3-260)||(28388307-28388562)
chr5 (49-343)||(30352503-30352788)
chr5 (36-317)||(13563704-13563983)
chr5 (36-298)||(38855778-38856038)
chr5 (36-295)||(1039558-1039815)
chr5 (37-298)||(28882058-28882311)
chr5 (5-283)||(7762008-7762285)
chr5 (36-292)||(11029071-11029326)
chr5 (83-283)||(41799534-41799731)
chr5 (34-210)||(4196616-4196790)
chr5 (96-343)||(43179605-43179849)
chr5 (1-149)||(14280797-14280945)
chr5 (111-317)||(6267612-6267816)
chr5 (251-317)||(4196792-4196858)
chr5 (1-49)||(19037467-19037515)
chr5 (1-51)||(7757353-7757403)
chr5 (1-51)||(28238167-28238217)
chr5 (1-50)||(13837752-13837801)
chr5 (183-272)||(16440192-16440281)
chr5 (2-47)||(25497540-25497585)
chr5 (36-89)||(31094599-31094651)
chr5 (1-50)||(35671110-35671159)
chr5 (1-49)||(18307282-18307330)
chr5 (1-49)||(28880350-28880398)
chr5 (9-52)||(27659976-27660019)
chr5 (1-48)||(34123933-34123980)
chr5 (1-48)||(38968123-38968170)
chr5 (1-52)||(41798846-41798897)
chr5 (1-44)||(42539375-42539418)
chr5 (3-49)||(11346037-11346083)
chr5 (264-298)||(14280728-14280762)
chr5 (1-47)||(18538334-18538380)
chr5 (1-51)||(25897074-25897124)
chr5 (1-51)||(38855706-38855756)
chr5 (6-51)||(8577007-8577052)
chr5 (212-281)||(30292313-30292382)
chr5 (12-53)||(31787559-31787600)
chr5 (1-50)||(40789203-40789252)
chr5 (1-42)||(41201756-41201797)
chr5 (5-49)||(8044-8088)
chr5 (1-49)||(542787-542835)
chr5 (2-46)||(3603148-3603192)
chr5 (3-47)||(4204210-4204254)
chr5 (1-49)||(19035266-19035314)
chr5 (1-49)||(30708931-30708979)
[»] chr3 (74 HSPs)
chr3 (1-298)||(6489357-6489652)
chr3 (56-343)||(66956-67241)
chr3 (39-317)||(21951866-21952141)
chr3 (1-295)||(4002258-4002550)
chr3 (1-283)||(600309-600589)
chr3 (36-298)||(7841158-7841418)
chr3 (1-298)||(6745076-6745371)
chr3 (4-283)||(50213488-50213765)
chr3 (1-298)||(36812865-36813160)
chr3 (1-317)||(48246440-48246753)
chr3 (76-298)||(9426707-9426928)
chr3 (36-298)||(13743330-13743589)
chr3 (76-283)||(36134048-36134253)
chr3 (76-298)||(46989615-46989835)
chr3 (1-298)||(3952964-3953260)
chr3 (76-283)||(42166177-42166382)
chr3 (1-283)||(47070496-47070776)
chr3 (6-298)||(30943222-30943514)
chr3 (76-298)||(2857732-2857953)
chr3 (76-276)||(9473721-9473919)
chr3 (82-283)||(2271463-2271663)
chr3 (76-273)||(52387902-52388097)
chr3 (36-283)||(16646939-16647183)
chr3 (1-298)||(8156536-8156832)
chr3 (36-280)||(50957461-50957702)
chr3 (31-237)||(14402808-14403011)
chr3 (1-189)||(2743426-2743611)
chr3 (76-189)||(4004947-4005058)
chr3 (212-280)||(2743678-2743746)
chr3 (184-282)||(7314585-7314683)
chr3 (1-50)||(34049108-34049157)
chr3 (1-50)||(54389823-54389872)
chr3 (1-49)||(2647696-2647744)
chr3 (1-49)||(4004800-4004848)
chr3 (1-49)||(41803026-41803074)
chr3 (1-49)||(43476220-43476268)
chr3 (1-52)||(34691653-34691704)
chr3 (1-52)||(41844358-41844409)
chr3 (1-52)||(43478824-43478875)
chr3 (1-51)||(35743577-35743627)
chr3 (1-51)||(46697739-46697789)
chr3 (1-51)||(50477208-50477258)
chr3 (1-46)||(19440284-19440329)
chr3 (1-46)||(41579724-41579769)
chr3 (1-50)||(49140843-49140892)
chr3 (2-50)||(20485527-20485575)
chr3 (1-41)||(49219796-49219836)
chr3 (1-49)||(55385165-55385213)
chr3 (1-52)||(8475854-8475905)
chr3 (1-52)||(16484450-16484501)
chr3 (1-48)||(20918009-20918056)
chr3 (1-48)||(20926971-20927018)
chr3 (1-48)||(44227140-44227187)
chr3 (1-44)||(48888768-48888811)
chr3 (2-52)||(9429843-9429893)
chr3 (1-47)||(29918340-29918386)
chr3 (1-47)||(29967493-29967539)
chr3 (1-51)||(42165191-42165241)
chr3 (1-43)||(46989575-46989617)
chr3 (1-47)||(48250868-48250914)
chr3 (1-51)||(49144451-49144501)
chr3 (1-50)||(6143699-6143748)
chr3 (1-50)||(10658851-10658900)
chr3 (4-49)||(36134354-36134399)
chr3 (1-50)||(45075374-45075423)
chr3 (1-42)||(46347725-46347766)
chr3 (6-50)||(1293410-1293454)
chr3 (1-49)||(2950394-2950442)
chr3 (8-52)||(4015123-4015167)
chr3 (2-46)||(13896876-13896920)
chr3 (1-45)||(42760210-42760254)
chr3 (1-49)||(49138642-49138690)
chr3 (1-49)||(54392025-54392073)
chr3 (5-49)||(55207660-55207704)
[»] chr1 (77 HSPs)
chr1 (4-343)||(1655795-1656131)
chr1 (36-317)||(8459021-8459299)
chr1 (36-343)||(19495103-19495410)
chr1 (36-298)||(4518166-4518425)
chr1 (36-317)||(51666397-51666675)
chr1 (1-317)||(9710606-9710919)
chr1 (3-343)||(13177841-13178175)
chr1 (56-343)||(7966065-7966347)
chr1 (1-298)||(46886138-46886432)
chr1 (1-343)||(36072397-36072730)
chr1 (1-317)||(25039812-25040121)
chr1 (1-317)||(44469742-44470056)
chr1 (76-298)||(46979008-46979228)
chr1 (1-298)||(50113335-50113630)
chr1 (36-279)||(22345818-22346053)
chr1 (1-298)||(15051098-15051393)
chr1 (36-283)||(52805325-52805569)
chr1 (1-298)||(20353685-20353980)
chr1 (36-298)||(29352296-29352556)
chr1 (36-298)||(30909779-30910039)
chr1 (76-283)||(94500-94705)
chr1 (76-283)||(22527460-22527665)
chr1 (1-298)||(38771657-38771954)
chr1 (56-298)||(13633622-13633863)
chr1 (36-283)||(21144396-21144641)
chr1 (1-298)||(3944002-3944298)
chr1 (1-298)||(3993592-3993888)
chr1 (8-283)||(470835-471108)
chr1 (83-283)||(16281807-16282004)
chr1 (76-283)||(31780070-31780275)
chr1 (183-317)||(38690117-38690251)
chr1 (123-317)||(37019127-37019319)
chr1 (91-279)||(19521714-19521900)
chr1 (155-343)||(33168083-33168271)
chr1 (91-275)||(50617320-50617503)
chr1 (99-315)||(5141603-5141816)
chr1 (1-154)||(38689959-38690111)
chr1 (129-298)||(5082114-5082283)
chr1 (133-280)||(6558047-6558192)
chr1 (134-267)||(12643369-12643500)
chr1 (1-158)||(23359237-23359394)
chr1 (96-258)||(47714877-47715037)
chr1 (1-103)||(6557943-6558043)
chr1 (302-343)||(46978949-46978990)
chr1 (1-49)||(13636119-13636167)
chr1 (240-343)||(1179878-1179981)
chr1 (1-52)||(19161920-19161971)
chr1 (1-52)||(44336277-44336328)
chr1 (1-51)||(3728763-3728813)
chr1 (1-51)||(6562156-6562206)
chr1 (1-51)||(8548664-8548714)
chr1 (1-51)||(48751405-48751455)
chr1 (1-46)||(29438020-29438065)
chr1 (1-46)||(52802158-52802203)
chr1 (1-49)||(19159651-19159699)
chr1 (1-48)||(11183214-11183261)
chr1 (1-52)||(15047310-15047361)
chr1 (1-64)||(19521637-19521700)
chr1 (1-52)||(44598900-44598951)
chr1 (1-51)||(2425680-2425730)
chr1 (1-47)||(8460096-8460142)
chr1 (1-47)||(13173863-13173909)
chr1 (1-47)||(19054249-19054295)
chr1 (1-51)||(26770548-26770598)
chr1 (1-51)||(26879290-26879340)
chr1 (1-95)||(29261442-29261535)
chr1 (1-51)||(29424408-29424458)
chr1 (1-51)||(29622419-29622469)
chr1 (1-51)||(46217313-46217363)
chr1 (2-51)||(3941145-3941194)
chr1 (302-335)||(4518115-4518148)
chr1 (5-46)||(26633559-26633600)
chr1 (155-212)||(29261544-29261601)
chr1 (1-46)||(46141810-46141855)
chr1 (6-51)||(50117841-50117886)
chr1 (6-50)||(9711647-9711691)
chr1 (8-52)||(13633904-13633948)
[»] chr8 (57 HSPs)
chr8 (34-296)||(43377045-43377304)
chr8 (1-317)||(43679425-43679738)
chr8 (50-343)||(4867508-4867799)
chr8 (50-298)||(2124254-2124503)
chr8 (50-317)||(39751137-39751402)
chr8 (39-317)||(23924032-23924307)
chr8 (10-246)||(23578472-23578705)
chr8 (1-294)||(35962335-35962626)
chr8 (1-278)||(34366939-34367214)
chr8 (36-317)||(39520-39799)
chr8 (76-317)||(20548990-20549228)
chr8 (1-298)||(7344306-7344602)
chr8 (17-298)||(31959811-31960090)
chr8 (36-273)||(41743927-41744162)
chr8 (1-298)||(8419432-8419728)
chr8 (1-298)||(32375679-32375975)
chr8 (76-277)||(41238951-41239150)
chr8 (196-343)||(7172032-7172179)
chr8 (76-298)||(30301236-30301458)
chr8 (176-317)||(22588173-22588314)
chr8 (96-317)||(22661305-22661523)
chr8 (163-327)||(30972595-30972759)
chr8 (34-190)||(7172469-7172625)
chr8 (105-281)||(31280942-31281118)
chr8 (36-156)||(1116105-1116224)
chr8 (1-52)||(22550859-22550910)
chr8 (1-52)||(45066355-45066406)
chr8 (53-134)||(22588311-22588392)
chr8 (4-52)||(41016445-41016493)
chr8 (1-52)||(184546-184597)
chr8 (1-44)||(38872932-38872975)
chr8 (1-51)||(26663028-26663078)
chr8 (1-51)||(39601732-39601782)
chr8 (1-49)||(26451508-26451556)
chr8 (4-48)||(40077248-40077292)
chr8 (5-49)||(42602492-42602536)
chr8 (3-51)||(43262451-43262499)
chr8 (1-48)||(1114771-1114818)
chr8 (1-52)||(15030912-15030963)
chr8 (1-51)||(17924278-17924328)
chr8 (1-47)||(18205814-18205860)
chr8 (1-51)||(21406295-21406345)
chr8 (1-51)||(21800787-21800837)
chr8 (1-51)||(21835174-21835224)
chr8 (1-51)||(22014274-22014324)
chr8 (1-47)||(41855396-41855442)
chr8 (6-51)||(1056196-1056241)
chr8 (1-46)||(2146957-2147002)
chr8 (1-46)||(3641674-3641719)
chr8 (1-46)||(18438662-18438707)
chr8 (1-46)||(32383205-32383250)
chr8 (1-46)||(32437160-32437205)
chr8 (1-49)||(483844-483892)
chr8 (1-49)||(15033144-15033192)
chr8 (1-49)||(22519559-22519607)
chr8 (1-49)||(36677926-36677974)
chr8 (1-49)||(40740934-40740982)
[»] chr6 (44 HSPs)
chr6 (37-298)||(7537250-7537509)
chr6 (36-317)||(29286266-29286544)
chr6 (1-317)||(23958918-23959232)
chr6 (36-317)||(18609964-18610242)
chr6 (52-343)||(29667538-29667827)
chr6 (36-317)||(25140837-25141115)
chr6 (5-294)||(2051060-2051346)
chr6 (1-276)||(11840022-11840295)
chr6 (36-317)||(31150796-31151074)
chr6 (1-294)||(28362485-28362776)
chr6 (6-298)||(18351393-18351683)
chr6 (1-283)||(31771505-31771786)
chr6 (50-312)||(26702448-26702698)
chr6 (1-280)||(13382657-13382932)
chr6 (76-283)||(3502429-3502634)
chr6 (36-298)||(1608355-1608617)
chr6 (48-230)||(2258360-2258540)
chr6 (106-253)||(8304570-8304715)
chr6 (105-317)||(34230611-34230822)
chr6 (96-327)||(20448508-20448736)
chr6 (116-298)||(20439755-20439935)
chr6 (116-282)||(19129120-19129281)
chr6 (96-282)||(20436063-20436247)
chr6 (228-318)||(2259338-2259428)
chr6 (1-49)||(6204855-6204903)
chr6 (1-49)||(11691822-11691870)
chr6 (1-49)||(22305136-22305184)
chr6 (1-52)||(13388702-13388753)
chr6 (1-52)||(26712076-26712127)
chr6 (1-52)||(28249913-28249964)
chr6 (1-47)||(18606072-18606118)
chr6 (1-51)||(29076318-29076368)
chr6 (1-51)||(29109851-29109901)
chr6 (1-51)||(29111291-29111341)
chr6 (1-51)||(31768781-31768831)
chr6 (3-46)||(13404632-13404675)
chr6 (1-52)||(26351090-26351141)
chr6 (1-51)||(9048103-9048153)
chr6 (1-51)||(27616743-27616793)
chr6 (1-50)||(9049080-9049129)
chr6 (2-47)||(17338763-17338808)
chr6 (1-50)||(31146401-31146450)
chr6 (1-49)||(6207057-6207105)
chr6 (1-49)||(11694024-11694072)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-293)||(19866-20157)
[»] scaffold0116 (1 HSPs)
scaffold0116 (3-317)||(15686-15998)
[»] scaffold0057 (2 HSPs)
scaffold0057 (86-343)||(21762-22005)
scaffold0057 (1-46)||(23227-23272)
[»] scaffold0513 (1 HSPs)
scaffold0513 (5-317)||(8231-8541)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-294)||(22431-22719)
[»] scaffold0494 (4 HSPs)
scaffold0494 (36-298)||(5076-5337)
scaffold0494 (1-52)||(859-910)
scaffold0494 (1-52)||(5359-5410)
scaffold0494 (8-51)||(892-935)
[»] scaffold0169 (1 HSPs)
scaffold0169 (36-215)||(1517-1693)
[»] scaffold0199 (3 HSPs)
scaffold0199 (76-278)||(12506-12706)
scaffold0199 (1-49)||(12385-12433)
scaffold0199 (1-49)||(10680-10728)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-283)||(236001-236272)
[»] scaffold0794 (1 HSPs)
scaffold0794 (1-52)||(5299-5350)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-52)||(50075-50126)
[»] scaffold0744 (1 HSPs)
scaffold0744 (1-51)||(418-468)
[»] scaffold0341 (1 HSPs)
scaffold0341 (1-51)||(17346-17396)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-47)||(15621-15667)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-51)||(232827-232877)
[»] scaffold0101 (2 HSPs)
scaffold0101 (1-49)||(36531-36579)
scaffold0101 (1-51)||(41017-41067)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-52)||(716-767)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-49)||(84608-84656)


Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 43943717 - 43944059
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43943717 cggctgcagttaactgtcgaggaaaaactcggtagttaactgccgaggaaaaacaattatgcagagaatgggttatgcataattctaaagcatttccaag 43943816  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43943817 ccatttttcggtcagtttttacctgtaattaaaccagagcatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaacaagaaaaat 43943916  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43943917 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaaaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 43944016  T
Q  301 ataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43944017 ataaacaacacattacaattcattacacatcattaaattaaat 43944059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 28342551 - 28342841
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||| ||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||||| ||| || ||||||||||||||| ||||||||     
T  28342551 cggctgcaattaactgccgaggaaattcttggtagttaactgccgaggaaaa-caattatgcagacagtgggttctgcataattctaaagaatttccaaa 28342649  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    | | ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||    
T  28342650 ctatttttcggccagtttttatctgtaattaaaccagaacatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaat 28342747  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28342748 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgt 28342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 41004556 - 41004894
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaactt-ggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaa 99  Q
    ||||||||||||||||||||  |||||||| |||| |||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||||| ||    
T  41004556 cggctgcagttaactgccgaa-aaaaacttcggtagttaactgccgaggaaaaata-ttatgcagacagtggattctgcataattctaaagcatttcaaa 41004653  T
Q  100 gccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    |||| ||||||| |||||||||||||||||||||||  | ||||||||||| |||  |||||||||||||||||| ||||||||||||||| ||||||||    
T  41004654 gcca-ttttcggtcagtttttacctgtaattaaaccgaagcatttccaaagacaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaa 41004750  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatg 299  Q
    || ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  41004751 tataatatcttttacaattgtctataattaaatcaaaccaacatttggtttaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccata 41004850  T
Q  300 cataaacaacacattacaattcattacacatcattaaattaaat 343  Q
      ||||||||||||||||| |||||||||||||||| |||||||    
T  41004851 attaaacaacacattacaactcattacacatcattatattaaat 41004894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 9660100 - 9659806
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||| |||||||||||||| ||||||| |||| |||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  9660100 cggctgcagttgactgccgaggaaaaccttggtagttaattgccgaggaaaa-caattatgcagacagtgggttatgcataattctaaaacatttccaag 9660002  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||    
T  9660001 ccatttttcggccagtttttacctttaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaat 9659904  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||    
T  9659903 acaatatcttttacaattgtccataattaaatcaaaacgacatttggttaaaattacacaaacgcttgaaattcatcaaaacgttacacagtgtccat 9659806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 41181474 - 41181752
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||    
T  41181474 ttaactgccgaggaaaa-caattatgcagacagtgggttatgcataattctaatgcatttccaagccattttttgggcagtttttacctgtaattaaacc 41181572  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||||||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  41181573 agagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataactaagaaaaatacaatatcttttacagttgtccataattaaatcaa 41181670  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  41181671 accgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 41181752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 24601668 - 24601962
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagc 101  Q
    |||||||||||||| |||||||||   | |||| |||||||||||||||||   |||||||||||| |||||| | |||||||| |||||||||||||||    
T  24601668 ggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggattctacataattcaaaagcatttccaagc 24601767  T
Q  102 cacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaata 201  Q
    || ||||||| |||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||    
T  24601768 catttttcggtcagtttttacttgtaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaata 24601865  T
Q  202 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24601866 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaacgttacaaagtgtccat 24601962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 298
Target Start/End: Complemental strand, 24612446 - 24612152
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagc 101  Q
    |||||||||||||| |||||||||   | |||| |||||||||||||||||   |||||||||||| |||||| | |||||||| |||||||||||||||    
T  24612446 ggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggattctacataattcaaaagcatttccaagc 24612347  T
Q  102 cacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaata 201  Q
    || ||||||| |||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||    
T  24612346 catttttcggtcagtttttacttgtaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaata 24612249  T
Q  202 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24612248 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattcatcaaaacgttacaaagtgtccat 24612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 41052685 - 41052944
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||| ||||||||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41052685 ttaattgccgaggaaaat-aattatgcagacagtgggttctgcataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaacc 41052783  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    |||  ||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41052784 agagtatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 41052881  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41052882 accgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 41052944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 82307 - 82014
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||| ||||||||| ||  ||| |||||||| |||||||| |||||||||||||||||  || |||||||||||||||||||| |||     
T  82307 cggctgcagttaactgtcgaggaaaacctccgtagttaactgctgaggaaaa-caattatgcagacaatgagttctgcataattctaaagcattttcaaa 82209  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||| |||||||||||||||||||||||||| |||||| ||||||  | |||||||||| |||||| |||||| ||||||||| |||||||||    
T  82208 ccatttttcggtcagtttttacctgtaattaaaccagagcatttctaaaggc--agtataaatcatccaacatcaaaacttggtcataaacaagaaaaat 82111  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  82110 acaatatcttttacaattgtccat-attaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 82014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 25184875 - 25184606
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||| | ||| ||| || || ||||||||||| ||||||||||    
T  25184875 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa-caattatgtaaacagtgggttctgtataattctaaaacatttccaag 25184777  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||  |||| |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||    
T  25184776 ccatttttcggccagtttttacctgtaattaaaccagagtattttcaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaat 25184679  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaatt 273  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25184678 acaatatcttttacaattgtccataattaaatcaaaccgatatttggttcaaattacacaaacgtttgaaatt 25184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 57 - 343
Target Start/End: Original strand, 12905606 - 12905887
Alignment:
Q  57 ttatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaa 156  Q
    ||||||||||| ||  || |||||||||||||||||||||||||||| |||||| |||||||||||   ||||| ||||||| |||||||||||||||      
T  12905606 ttatgcagacagtgagttctgcataattctaaagcatttccaagccatttttcgaccagtttttac---taatttaaccagagcatttccaaaggcaa-- 12905700  T
Q  157 tataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta 256  Q
    ||||| |||||||||||| |||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12905701 tataactcatacaacatttaaactcagtcataaacaagtaaaatacaatatattttacaattgtccataattaaatcaaaccgacatttggttcaaaata 12905800  T
Q  257 cacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||||| |||||| ||   ||||||||||||||||| ||||||||||||||||||||||||    
T  12905801 cacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaacaacacattacaactcattacacatcattaaattaaat 12905887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 1096632 - 1096892
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||| ||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  1096632 ttaactgccgaggaaaactgattatgaagacagtgggttatgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaac 1096730  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||||||||||| |    
T  1096731 cagagcatttccaaaggcaaaata--attcatacaacattaaaactcggacataaacaagataaatacagtatcttttacaattgtccataattaaatta 1096828  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1096829 aaccgacatttggttcaaactacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 1096892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 76 - 298
Target Start/End: Complemental strand, 439792 - 439574
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||||     
T  439792 tgcataattctaaagcatttccaagccatttttcggtcagtttttacctgtaattaaaccagcgcatttccaaaggcaa--tataaatcatacaacattg 439695  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  439694 aaactcggtcataaacaagaaa--tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattca 439597  T
Q  276 tcaaaacgttacaaagtgtccat 298  Q
    ||||| ||||||||||| |||||    
T  439596 tcaaagcgttacaaagtatccat 439574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 56 - 317
Target Start/End: Complemental strand, 45479811 - 45479552
Alignment:
Q  56 attatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaa 155  Q
    |||||||||||| ||| || |||||||||||||||||||| ||||| | |||||||||||||||||| ||||||| ||||||| |||||||||||||||     
T  45479811 attatgcagacagtgggttctgcataattctaaagcattttcaagctatttttcggccagtttttacttgtaatttaaccagagcatttccaaaggcaa- 45479713  T
Q  156 atataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatt 255  Q
     ||||| | |||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  45479712 -tataactaatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaat 45479614  T
Q  256 acacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||| ||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||    
T  45479613 acaaaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattaca 45479552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 24754069 - 24753755
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||| |||||||||| || |||||| |||||||||||||||   ||||||||||||     || |||||||||||||| ||||||||||    
T  24754069 cggctgcagttaactaccgaggaaaacctcggtaataaactgccgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttccaag 24753971  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| ||||| || |||||| |||| |||    
T  24753970 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactgggacataaacaagataaa 24753873  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatg 299  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||     
T  24753872 tacaatatcttttacaatttttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccata 24753773  T
Q  300 cataaacaacacattaca 317  Q
      |||||||| |||||||    
T  24753772 attaaacaactcattaca 24753755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 7267489 - 7267194
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||| ||||||| || |||| ||||||||||||||||    |||||||||||| ||| |  ||||||||| |||||||||||||||    
T  7267489 cggcggcagttaactgccaaggaaaatctcggtagttaactgccgaggaaatctgattatgcagacagtgggtc-tgcataattgtaaagcatttccaag 7267391  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | | |||||| ||| |||||||| |||||  |||| ||     
T  7267390 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--atttatacaagattgaaactcggacataatgaagataag 7267293  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  7267292 tacaatatcttttacaattgttcataattaaattaaacctacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 7267194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 3795365 - 3795641
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||   |||||||||||| ||| |  |||||||||||||| ||||||||||    
T  3795365 cggctgcagttaactgccgaggaaaaccttggaagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattctaaa-catttccaag 3795462  T
Q  101 ccacttttc-ggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  3795463 ccatttttttggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataag 3795560  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  3795561 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 3795641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 10825246 - 10825526
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||  |||||| ||||||||| || || | |||||||||||| |||    ||||||||| || ||   | ||||| |||||||| ||||||||||    
T  10825246 cggctgcacctaactgtcgaggaaaacctcggcagttaactgccgagaaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaag 10825345  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    |   |||||||||||||||||||||||||||||||||| |||||| |||||||||| |  | |||||||||||| |||||| | |||||| |||| ||||    
T  10825346 cattttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattgaaactcagacataaacaagataaat 10825443  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  10825444 acaatatcttttacaattgtccataattaaatcaaacagacatttggttcaaattacacaaacgtttgaaattcatcataacg 10825526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 39951141 - 39950936
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||| |||||||||| |||||||||||||||| |||||| |||||||||| |  | ||||||||||||     
T  39951141 tgcatcattctaaaacatttccaagccttttttcgaccagtttttatctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattg 39951044  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  39951043 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 39950944  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  39950943 tcataacg 39950936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 41564537 - 41564240
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||| ||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  41564537 cggcggcagttaactgccgaggaaaacctcggtagttaacggccaaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 41564439  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  41564438 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 41564341  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  41564340 aatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 41564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 283
Target Start/End: Original strand, 32952840 - 32953038
Alignment:
Q  83 ttctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcg 182  Q
    ||||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||| |||||| ||||||||||||  | |||||||||||| ||||||     
T  32952840 ttctaaatcattttcaagccatttttcggtcagtttttacctgtaattaaagcagagcatttcgaaaggcaaaata--attcatacaacattgaaactca 32952937  T
Q  183 gtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    | ||| || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  32952938 gacatcaacaagaaaaatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcataac 32953037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 36 - 292
Target Start/End: Complemental strand, 39798449 - 39798194
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||| || |||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||    
T  39798449 ttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaattaaac 39798351  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    ||||  |||||||||||  |||||  | |||||||| ||| ||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||| |    
T  39798350 cagacaatttccaaaggttaaata--attcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaaatta 39798253  T
Q  235 aaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagt 292  Q
    |||||||| ||||||| | |||| ||||| ||||||||||||||||||| |||||||||    
T  39798252 aaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagt 39798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 8 - 298
Target Start/End: Complemental strand, 5351770 - 5351481
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttt 107  Q
    ||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |||    
T  5351770 agttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccatttt 5351672  T
Q  108 t-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatacaa 204  Q
    | |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||||||||    
T  5351671 ttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagataaatacaa 5351575  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  5351574 tatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 5351481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 18000260 - 18000556
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||| ||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  18000260 cggcggcagttaactgccgaggaaaacctcggtagttaactggcgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 18000358  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  18000359 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 18000455  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  18000456 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 18000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 298
Target Start/End: Complemental strand, 38950496 - 38950316
Alignment:
Q  116 tttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttaca 215  Q
    ||||||||||||||||||||||| |||||||||||| ||  ||||| |||||||| ||| |||||||| |||||  |||| |||||||||||||||||||    
T  38950496 tttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttaca 38950399  T
Q  216 attgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  38950398 attgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 38950316  T

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Target: chr2; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 283
Target Start/End: Original strand, 29397941 - 29398213
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataat----tctaaagcatttccaa 99  Q
    ||||||||||||||||||||||| || || | ||||||||||||||||| |||    ||||||| ||   | ||||| ||    |||||| ||||| |||    
T  29397941 ctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaa-caa----gcagacattgagctctgcatgatactttctaaaacattttcaa 29398035  T
Q  100 gccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
      || ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||  | |||||||||||| |||||||| |||||    ||||||    
T  29398036 atcatttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaata--attcatacaacattgaaactcggacataa----gaaaaa 29398129  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  29398130 tacaatattttttacaattgtccataattaaattaaaccgacatttagttcaaattacacaaatgtttgaaattcatcataacg 29398213  T

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Target: chr2; HSP #27
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 31 - 298
Target Start/End: Original strand, 209042 - 209308
Alignment:
Q  31 ggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaat 129  Q
    |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |||| |||||||||||||||||||||    
T  209042 ggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccattttttcggccagtttttacctgtaat 209140  T
Q  130 taaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataat 227  Q
    ||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||||||||||||||||||||||||  |||||    
T  209141 taaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataat 209237  T
Q  228 taaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  209238 taaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 209308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 10620036 - 10620297
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||    
T  10620036 ttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccattttttcggccagtttttacctgtaattaaac 10620134  T
Q  135 cagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaat 232  Q
    |||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||||||||||||||||||||||||  ||||||||||    
T  10620135 cagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaat 10620231  T
Q  233 caaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  10620232 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 10620297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 298
Target Start/End: Original strand, 3206956 - 3207070
Alignment:
Q  184 tcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  3206956 tcataaacaagaaagatacattatcttttacaattgtctataattaaatcaaaccgacatttagttcaaagtatacaaaagtttgaaattcatcaaaacg 3207055  T
Q  284 ttacaaagtgtccat 298  Q
    || ||  ||||||||    
T  3207056 ttgcatggtgtccat 3207070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7189996 - 7189818
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||||||||||||||  | |||| ||||||||||||||||    |||  |||| || ||   | ||||| |||||||| ||||||||||    
T  7189996 cggctgcagttaactgccgaggaaaacttcggtagttaactgccgaggaaatctgatt--gcaggcagtgagctctgcatcattctaaaacatttccaag 7189899  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcgg 183  Q
    ||  |||||||||| ||||||||||||||||||||||| |||||| ||||||| |  | || |||||||||||| ||||||||    
T  7189898 ccttttttcggccaatttttacctgtaattaaaccagagcatttcgaaaggcaga--acaattcatacaacattgaaactcgg 7189818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 281
Target Start/End: Original strand, 25613349 - 25613508
Alignment:
Q  119 ttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaatt 218  Q
    |||||||| ||| ||||| | || ||||| ||||||  || || ||||||| |||| ||| || |||||||| ||||||| ||||  |||||||||||||    
T  25613349 ttacctgtcattcaaccacatcaattccagaggcaa--tacaactcatacatcatttaaaatcagtcataaacaagaaaa-tacataatcttttacaatt 25613445  T
Q  219 gtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 281  Q
    | ||| ||||||||||| | | ||||| ||| ||||||||  || ||||||||||||||||||    
T  25613446 gaccaaaattaaatcaatcaggcattttgtttaaattacaagaatgtttgaaattcatcaaaa 25613508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43982227 - 43982276
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||    
T  43982227 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaa 43982276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17424160 - 17424208
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  17424160 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 17424208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23346808 - 23346860
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaa 53  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||||||    
T  23346808 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggaaaaa 23346860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22003446 - 22003395
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  22003446 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 22003395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28477112 - 28477061
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || |||| ||||||||| |||||||    
T  28477112 cggctgcagttaactgccgaggaaaacctcggtagttaactgccaaggaaaa 28477061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35490708 - 35490759
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||| || ||||| ||||||| |||||||||||||||||    
T  35490708 cggctgcagttaactgctgaagaaaaccttggtagttaactgccgaggaaaa 35490759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41183269 - 41183218
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||||||    
T  41183269 cggctgcagttaactaccgaggaaaacctcggtagttaactgccgaggaaaa 41183218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3943237 - 3943187
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||| |||| || |||| ||||||||||||||||    
T  3943237 cggctgcagttaactgccgagaaaaacctcggtagttaactgccgaggaaa 3943187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28468669 - 28468719
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  28468669 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 28468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 12908473 - 12908428
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||    
T  12908473 ggctgcagttaactgccgaggaaaaccttgatagttaactgccgag 12908428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10365837 - 10365789
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||| ||||||||||||||||||| ||||||| |||| |||||||||    
T  10365837 cggctgtagttaactgccgaggaaaaccttggtagttaaatgccgagga 10365789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23347373 - 23347321
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaa 53  Q
    ||||||||||||||| |||||||||| || ||||  |||||||||||||||||    
T  23347373 cggctgcagttaactaccgaggaaaacctcggtagctaactgccgaggaaaaa 23347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41500279 - 41500231
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||||||||| |||| || |||| ||||||||||||||    
T  41500279 cggctgcagttaactgccgagaaaaacctcggtagttaactgccgagga 41500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 43536136 - 43536180
Alignment:
Q  7 cagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||| || |||| ||||||||||||||||    
T  43536136 cagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 43536180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14456530 - 14456581
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || || | |||||| ||||||||||    
T  14456530 cggctgcagttaactgccgaggaaaacctcggcagttaactaccgaggaaaa 14456581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 30493394 - 30493437
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||| || |||| ||||||||||||||||    
T  30493394 agttaactgccgaggaaaatctcggtagttaactgccgaggaaa 30493437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27276419 - 27276369
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||| || || | |||| |||||||||||    
T  27276419 cggctgcagttaactgccgaggaaaacctcgggagttaattgccgaggaaa 27276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32956388 - 32956338
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||| ||||||||||||||||||| || |||| | ||||||||||||||    
T  32956388 cggctgtagttaactgccgaggaaaatctcggtagtcaactgccgaggaaa 32956338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34921804 - 34921758
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||    
T  34921804 cggctgcagttaactgctgaggaaaacctcggtagttaactgccgag 34921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43258778 - 43258728
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| |||| |||||  |||||| ||||||||||||||||    
T  43258778 cggctgcagttaactaccgaagaaaactttggtagttaactgccgaggaaa 43258728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43491137 - 43491183
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  43491137 cggctgcaattaactgtcgaggaaaaccttggtagttaactgccgag 43491183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44100843 - 44100793
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| |||||| |||||||||    
T  44100843 cggcggcagttaactgccgaggaaaacctcggtagttaactaccgaggaaa 44100793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3937897 - 3937848
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||| ||| || || | |||||||||||||||    
T  3937897 cggctgcagttaactgccgaggtaaacctcggaagttaactgccgaggaa 3937848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 29093870 - 29093825
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||    
T  29093870 ctgcagttaattgccgaggaaaaccttggcagttaactgccgagga 29093825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30273195 - 30273146
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||| |||||||||||||||||||| || |||| |||| ||||||||||    
T  30273195 cggctacagttaactgccgaggaaaacctcggtagttaattgccgaggaa 30273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33222644 - 33222693
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||||||||  | || | |||||||||||||||    
T  33222644 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggaa 33222693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41053676 - 41053627
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||| ||||||||  ||||||| ||||||| |||||||    
T  41053676 cggctgcagttaactggcgaggaaatccttggtagttaactggcgaggaa 41053627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 343
Target Start/End: Complemental strand, 1150774 - 1150746
Alignment:
Q  315 acaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||    
T  1150774 acaattcattacacatcattaaattaaat 1150746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 7263047 - 7263095
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||  || || | ||||||||||||||||    
T  7263047 gctgcagttaactgccgaggaaatcctcgggagttaactgccgaggaaa 7263095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 343
Target Start/End: Original strand, 28342852 - 28342880
Alignment:
Q  315 acaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||    
T  28342852 acaattcattacacatcattaaattaaat 28342880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31974292 - 31974244
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||| |||||||||| || || | ||||||||||||||    
T  31974292 cggctgcagttaactaccgaggaaaatctcggcagttaactgccgagga 31974244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42499814 - 42499862
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  42499814 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 42499862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 44051137 - 44050843
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||| |||||||||  || |||| ||||||||||||||||| |||||||||| ||| ||| || |||||||||||||||||||||||||    
T  44051137 cggctgcagttaactcccgaggaaatcctcggtagttaactgccgaggaaaa-caattatgcaaacagtgggttctgcataattctaaagcatttccaag 44051039  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||    
T  44051038 ccatttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaat 44050941  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44050940 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 44050843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 317
Target Start/End: Original strand, 38460456 - 38460767
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcc 102  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| || ||| || |||||||||||||||||||||||||||    
T  38460456 gctgcagttaactgtcgaggaaaacctcggtaattaactgccgaggaaaa-caattatgcagtcagtgggttctgcataattctaaagcatttccaagcc 38460554  T
Q  103 acttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatac 202  Q
    | ||||||| |||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||     
T  38460555 atttttcggtcagtttttacctgtaattaaaccagagcattttcaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatat 38460652  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcat 302  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||   |    
T  38460653 aatatcttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaatgttacaaagtgtccataatt 38460752  T
Q  303 aaacaacacattaca 317  Q
    ||||||| |||||||    
T  38460753 aaacaactcattaca 38460767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 317
Target Start/End: Complemental strand, 10423444 - 10423139
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttt 107  Q
    ||||||||||||||||||  || |||| ||||||||||||||||| |||||||||||||| ||| || ||||||| ||||||||| |||||||||| |||    
T  10423444 agttaactgccgaggaaatcctaggtagttaactgccgaggaaaa-caattatgcagacagtgggttttgcataaatctaaagcaattccaagccatttt 10423346  T
Q  108 tcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatat 207  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||| |||    
T  10423345 tcggccagtttttacctgtaattaaaccagagcattttcaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaataca-tat 10423249  T
Q  208 cttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaaca 307  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||   ||||||    
T  10423248 cttttacaattgtccataattaaattaaaccgacattaggttcaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccataattaaaca 10423149  T
Q  308 acacattaca 317  Q
    || |||||||    
T  10423148 actcattaca 10423139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 36 - 343
Target Start/End: Complemental strand, 4774623 - 4774319
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||||| | |||||||||||||||| |||||| | ||||||||||||||||| ||||    
T  4774623 ttaactgccgaggaaaa-caattatgcagacagtggtttctgcataattgttaagcatttccaagccatttttcgactagtttttacctgtaatttaacc 4774525  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| ||||||||||| |||  ||||| | |||||||||| |||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||    
T  4774524 agagcatttccaaagccaa--tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaa 4774427  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcatta 335  Q
    | |||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4774426 atcgacatttggttcaaaatacacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcatta 4774327  T
Q  336 aattaaat 343  Q
    ||||||||    
T  4774326 aattaaat 4774319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 48 - 343
Target Start/End: Original strand, 18578697 - 18578990
Alignment:
Q  48 gaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttcca 147  Q
    |||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||| |||||||| ||||||||| ||||||| |||||||  |||||||    
T  18578697 gaaaaacatttatgcagacagtggattctgcataattgttaagcatttccaagccatttttcggctagtttttacttgtaattcaaccagagtatttcca 18578796  T
Q  148 aaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttgg 247  Q
    |||||||  ||||| | |||||||||| ||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18578797 aaggcaa--tataacttatacaacatttaaactcactcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttga 18578894  T
Q  248 ttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  18578895 ttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaacacattacaactcattacacatcattaaattaaat 18578990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 37395227 - 37394967
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||| ||||||||||||   |||||||||||| ||| || |||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||    
T  37395227 ttaattgccgaggaaaactgattatgcagacagtgggttctgcataattctaaa-cattttcaagccattttttcggccagtttttacctgtaattaaac 37395129  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||| ||||||  | |||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |    
T  37395128 cagagcatttccaaaggaaaaata--attcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatta 37395031  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37395030 aaccgacatttgattcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccat 37394967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 52 - 343
Target Start/End: Original strand, 51642096 - 51642374
Alignment:
Q  52 aacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaagg 151  Q
    |||||||||||||| | ||| || ||||||||| |||||||||| ||| ||| ||||||| |||||||||           |||||| ||||| ||||||    
T  51642096 aacaattatgcagatagtgggttctgcataattttaaagcattttcaaaccatttttcggtcagttttta-----------accagagcattttcaaagg 51642184  T
Q  152 caaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttca 251  Q
    |||  |||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51642185 caa--tataaatcatacaatattgaaactcgatcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttca 51642282  T
Q  252 aattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||| |||||||| |||||||| ||||||    
T  51642283 aattacacaaaagtttgaaattcatcaaaacgttacaaattgtccataattaaacaacacattacaactcattacatatcattaagttaaat 51642374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 51492099 - 51492374
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||||    ||||||||| || ||   | ||||| |||||||| ||||||||||    
T  51492099 cggctgcagttaactgcctaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaag 51492198  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||  ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||  | ||||||||||||||||||||  |||||| |||| || |    
T  51492199 ccttttttcagccagattttacctgtaattaaaccagagcatttcgaaaggcaaaata--attcatacaacattaaaactcgaacataaacaagataagt 51492296  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatca 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51492297 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 51492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 3408285 - 3407989
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| | |  ||||||||||||   |||||| ||||| ||| || |||||||||||||| ||||||||||    
T  3408285 cggcggcagttaactgccgaggaaaacctcggtagtaacttgccgaggaaaactgattatgtagacagtgggttctgcataattctaaa-catttccaag 3408187  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||  | |||||||| ||| ||||||||||||||  |||| |||    
T  3408186 ccattttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggtcataatcaagataaa 3408089  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  3408088 tacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 3407989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 36 - 294
Target Start/End: Complemental strand, 50905170 - 50904917
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| ||||||  |||||| ||  || ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||    
T  50905170 ttaactgccgaggaaaa-caatta--cagacagtgagttctgcataattctaatgcatttccaagccatttttcggccaatttttacctgtaattaaacc 50905074  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||| ||| ||||  |||||||||||||||||| |||||||  |||||| ||||||||||  | ||||||||||||||||||||||||||||||    
T  50905073 agagcatttctaaatgcaa--tataaatcatacaacattgaaactcgaacataaacaagaaaaatatgaaatcttttacaattgtccataattaaatcaa 50904976  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  50904975 accgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgatacaaagtgt 50904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 15995750 - 15996026
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||   |||||||||||| ||| |  |||||||||||||| ||||||||||    
T  15995750 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattctaaa-catttccaag 15995847  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| ||| |||| |||||  |||| ||     
T  15995848 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaagtcggacataatgaagataag 15995945  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  15995946 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 15996026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 19069215 - 19069491
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||   |||||||||||| ||| |  ||||||||| |||| ||||||||||    
T  19069215 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattgtaaa-catttccaag 19069312  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| || ||||||||||| ||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  19069313 ccattttttcgaccagtttttacttgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataag 19069410  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    || |||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  19069411 taaaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 19069491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 50278834 - 50278588
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||  ||||||||||||| ||   | ||||| ||||||||  |||| ||||||| |||| ||  |||||||||||||||||||||     
T  50278834 ttaactgccgaggaaaacaaattatgcagacagtgagctctgcatgattctaaaatattttcaagccattttttcgatcagtttttacctgtaattaaaa 50278735  T
Q  135 cagaacatttccaaaggcaaaatataaatc-atacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatc 233  Q
    |||| |||||| ||||||||||||   ||| |||||||||| |||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  50278734 cagagcatttcgaaaggcaaaata---atctatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattattcataattaaatc 50278638  T
Q  234 aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  50278637 aaaccgacatttggttgaaattacacaaacgtttgaaattcatcataacg 50278588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 37015931 - 37016206
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccact 105  Q
    |||||||||||||||||||||  | |||| ||||||||| ||||||   ||||||| || || ||   | ||||| |||||||| ||||| |||| |  |    
T  37015931 gcagttaactgccgaggaaaacttcggtagttaactgcccaggaaatctaattatggaggcagtgagctctgcatcattctaaaacattttcaagtcttt 37016030  T
Q  106 tttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaat 205  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||| |  | ||||||| |||| |||||||| |||||| |||| |||||||||    
T  37016031 tttcagccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacatcattgaaactcggacataaacaagataaatacaat 37016128  T
Q  206 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||||||||| ||||    
T  37016129 atcttttacaattgtccataattaaatcaaactgacgtttgattcaaattacagaaacgtttgaaattcatcataacg 37016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 49563868 - 49564165
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||| |||||| |||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  49563868 cggcggcagttaactgccgaggaaaacctcggtagttaacggccgagaaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 49563966  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  49563967 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 49564064  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  49564065 aatacaatatattttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 49564164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 278
Target Start/End: Original strand, 44674241 - 44674440
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||| ||||||||||  |||||||||||| |||| |||||| |||||||||| |  | ||||||||||||     
T  44674241 tgcatcattctaaaacatttccaagcctttttttggccagttttc-cctgtaattaaatcagagcatttcgaaaggcaaaaca--attcatacaacattg 44674337  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  44674338 aaactcggacataaacaagataagtacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacatttaaaattca 44674437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 209 - 343
Target Start/End: Original strand, 24415392 - 24415526
Alignment:
Q  209 ttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||   |||||||    
T  24415392 ttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaa 24415491  T
Q  309 cacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||| |||||||| |||||||||||||||    
T  24415492 cacattacaactcattacatatcattaaattaaat 24415526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 10374239 - 10374381
Alignment:
Q  175 aaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattc 274  Q
    |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  10374239 aaaactcggtcataaccaagaaaaatacaataccttttacagttgtccataattaaatgaaaccgacatttggttcaaattacacaaacgtttgaaattc 10374338  T
Q  275 atcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||| |||||| ||||||||   |||||||| |||||||    
T  10374339 atcaaaacattacaaggtgtccataattaaacaactcattaca 10374381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 24414867 - 24415072
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccac 104  Q
    ||||||||||||| ||| |||| || |||| ||||| |  | |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||     
T  24414867 tgcagttaactgctgagtaaaacctcggtagttaacggttggggaaaa-caattatgcagacagtgggttctgcataattctaaagcatttccaagccat 24414965  T
Q  105 ttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    || |||| ||||||||||||||||||||||||||||||||||||||  | ||||||| ||| | |||||| ||||||  ||||||  |||||||||||||    
T  24414966 ttatcggacagtttttacctgtaattaaaccagaacatttccaaag--ataatataactcagaaaacatttaaactcaatcataagcaagaaaaatacaa 24415063  T
Q  205 tatctttta 213  Q
    ||| |||||    
T  24415064 tatttttta 24415072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 343
Target Start/End: Original strand, 6186786 - 6187016
Alignment:
Q  113 cagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcata--aataagaaaaatacaatatctt 210  Q
    |||||||||||||||||| ||||| | ||||||| |||||||  ||  | || ||||||||| | |||| ||||||  || |||||||||||| ||||||    
T  6186786 cagtttttacctgtaattcaaccaaagcatttccgaaggcaa--tactagtcgtacaacatttatactcagtcatataaacaagaaaaatacattatctt 6186883  T
Q  211 ttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaaca 310  Q
    ||| | | ||| ||||||||||||| ||||||||| ||| |||||||||  | ||||||||||||||||||| ||| |  ||||||||   |||||||||    
T  6186884 ttatagtagtcaataattaaatcaatccgacatttcgttaaaattacacgtatgtttgaaattcatcaaaacattaaagggtgtccataattaaacaaca 6186983  T
Q  311 cattacaattcattacacatcattaaattaaat 343  Q
    ||||||||   |||||| |||||||||||||||    
T  6186984 cattacaacatattacatatcattaaattaaat 6187016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 343
Target Start/End: Complemental strand, 30043381 - 30043138
Alignment:
Q  96 ccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataaga 195  Q
    |||||||| |||||| ||||||||||| || |||| ||||||| |||||| | ||||||  ||  | || ||||||||| | |||  |||||||| ||||    
T  30043381 ccaagcca-ttttcgaccagtttttacatgaaattcaaccagagcatttcaagaggcaa--tactattcgtacaacatttatactaagtcataaacaaga 30043285  T
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    |||||  | |||||||||||||| |||||||||||||||| ||||| |   ||| |||||||||  | |||||||||| |||||||| ||| | |||| |    
T  30043284 aaaatgtattatcttttacaattatccataattaaatcaatccgacgtagagttaaaattacacggatgtttgaaatttatcaaaacattaaagagtg-c 30043186  T
Q  296 catgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||   ||||||||||| |||||  ||||||| ||| |||||| ||||    
T  30043185 cataattaaacaacacactacaacacattacatatcgttaaatgaaat 30043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21022933 - 21022883
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  21022933 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 21022883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6178155 - 6178107
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  6178155 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 6178107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9890022 - 9890070
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  9890022 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 9890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16984206 - 16984154
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaa 53  Q
    |||||||||||||||||||||||||| || | || ||||||||||||||||||    
T  16984206 cggctgcagttaactgccgaggaaaacctcgatagttaactgccgaggaaaaa 16984154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49094112 - 49094160
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  49094112 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 49094160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33051698 - 33051647
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaactt-ggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  33051698 cggctgcagttaactgccgaagaaaaacttcggcaattaactgccgaggaaa 33051647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37563325 - 37563274
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  37563325 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 37563274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39773432 - 39773483
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  39773432 cggcagcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 39773483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54634060 - 54634009
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  54634060 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 54634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 55407838 - 55407791
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||    
T  55407838 cggctgcagttaactgccgaggaaaatctcggtagttaactgccgagg 55407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15999844 - 15999794
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||| ||||||||||||||||| || |||| ||||||||||||||||    
T  15999844 cggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggaaa 15999794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30726786 - 30726736
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  30726786 cggcagcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 30726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31425363 - 31425313
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  31425363 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 31425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40358325 - 40358275
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  40358325 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 40358275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11494571 - 11494616
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  11494571 cggctgcagttaactgccgaggaaaacctcggtagttaactgccga 11494616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 39590611 - 39590562
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||| || |||| ||||||||||| |||||    
T  39590611 gctgcagttaactgccgaggaaaacctcggtagttaactgccgatgaaaa 39590562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 958635 - 958591
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||| || |||| ||||||||||||||    
T  958635 tgcagttaactgccgaggaaaacctcggtagttaactgccgagga 958591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41795401 - 41795353
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || | || ||||||||||||||    
T  41795401 cggctgcagttaactgccgaggaaaacctcgttagttaactgccgagga 41795353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44561375 - 44561327
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  44561375 cggctgcagttaactaccgaggaaaatctcggtagttaactgccgagga 44561327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 55793948 - 55793996
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || || | ||||||||||||||    
T  55793948 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 55793996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 56138280 - 56138328
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  56138280 cggctgcagttaactgccgaggaaaacctcagtagttaactgccgagga 56138328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 26932619 - 26932662
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||| || |||| ||||||||||||||||    
T  26932619 agttaactgccgaggaaaacctcggtagttaactgccgaggaaa 26932662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1089629 - 1089579
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||||    
T  1089629 cggcggcagttaaatgccgaggaaaacctcggtagttaactgccgaggaaa 1089579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20208538 - 20208580
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgc 43  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  20208538 cggctgcagttaactgccgaggaaaacctcggtagttaactgc 20208580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26792289 - 26792239
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||| ||||||    
T  26792289 cggcggcagttaactgccgaggaaaatctcggtagttaactgccaaggaaa 26792239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49169142 - 49169092
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||| | || |||| ||||||||||||||||    
T  49169142 cggcggcagttaactgccgaggaatacctcggtagttaactgccgaggaaa 49169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 955820 - 955865
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||||||||| |||| || |||| |||||||||||    
T  955820 cggctgcagttaactgccgagaaaaacctcggtagttaactgccga 955865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 1041966 - 1042011
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||| |||| || |||| ||||||||||||||    
T  1041966 ctgcagttaactgccgagaaaaatctcggtagttaactgccgagga 1042011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19073700 - 19073655
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||  || |||| |||||||||||    
T  19073700 cggctgcagttaactgccgaggaaatcctcggtagttaactgccga 19073655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29700347 - 29700302
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||    
T  29700347 cggctgcagttaactgccgaggaaaacctcggtagttaattgccga 29700302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34151642 - 34151687
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| | |||||||||    
T  34151642 cggctgcagttaactgccgaggaaaacctcggtagtaaactgccga 34151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16983550 - 16983602
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaa 53  Q
    ||||| ||||||||||||||| |||| || |||| ||||||||||| ||||||    
T  16983550 cggctacagttaactgccgagaaaaacctcggtagttaactgccgaagaaaaa 16983602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 21018067 - 21018111
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||| ||||| || |||| |||||||||||||||    
T  21018067 gcagttaactgccgaagaaaacctcggtagttaactgccgaggaa 21018111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41793392 - 41793440
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  41793392 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 41793440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 44795134 - 44795189
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaa 132  Q
    ||||| |||||||| ||||| ||||||  ||||||||||| ||||||||||||||||    
T  44795134 tgcatcattctaaaacattttcaagccttttttcggccag-ttttacctgtaattaa 44795189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 317
Target Start/End: Original strand, 34622530 - 34622840
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    ||||||||||||| ||||||||  || |||| ||||| ||| ||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  34622530 ctgcagttaactgtcgaggaaatcctcggtagttaacagccaaggaaaa-caattatgcagacagtgggttctgcataattctaaagcatttccaagcca 34622628  T
Q  104 cttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
     ||||||| |||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34622629 tttttcggtcagtttttacatgtaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaataagaaaaataca 34622726  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcata 303  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||    
T  34622727 atatattttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataatta 34622826  T
Q  304 aacaacacattaca 317  Q
    |||||| |||||||    
T  34622827 aacaactcattaca 34622840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 298
Target Start/End: Original strand, 19044324 - 19044615
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    |||||||||| ||||||||||||  | |||| ||||||||||||||||| |||||||||||| | ||| || ||||||||||||| ||||||||||||||    
T  19044324 ctgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaa-caattatgcagatagtgggttttgcataattctaatgcatttccaagcca 19044422  T
Q  104 cttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
     |||||||| |||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| ||| | ||||||||  ||||||||||||    
T  19044423 tttttcggctagtttttacctgtaattaaaccagagaatttccaaaggcaa--tataaatcatacaacattgaaattgggtcataaccaagaaaaataca 19044520  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  19044521 atatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat 19044615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 298
Target Start/End: Complemental strand, 20710312 - 20710021
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    |||||||||| ||||||||||||  | |||| ||||||||||||||||| |||||||||||| | ||| || ||||||||||||| ||||||||||||||    
T  20710312 ctgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaa-caattatgcagatagtgggttttgcataattctaatgcatttccaagcca 20710214  T
Q  104 cttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
     |||||||| |||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| ||| | ||||||||  ||||||||||||    
T  20710213 tttttcggctagtttttacctgtaattaaaccagagaatttccaaaggcaa--tataaatcatacaacattgaaattgggtcataaccaagaaaaataca 20710116  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  20710115 atatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat 20710021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 10705276 - 10705615
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||||||||| |||| ||||| | |||||||||||| ||||   |||||||||||| ||| || ||||||||||||||||| |||||||    
T  10705276 cggctgcagttaactgccgagaaaaaccttgggagttaactgccgag-aaaactgattatgcagacagtgggttctgcataattctaaagcacttccaag 10705374  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
     || ||||||| || ||||||| ||||||| ||||| | |||||| ||||||||  ||||| | |||||||||| |||||| |||||||| ||| |||||    
T  10705375 tcatttttcggtcaatttttacatgtaatttaaccaaagcatttctaaaggcaa--tataacttatacaacatttaaactcagtcataaacaagtaaaat 10705472  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||      
T  10705473 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttaaaattcatcaaaatgttacatagtgtccataa 10705572  T
Q  301 ataaacaacacattacaattcattacacatcattaaattaaat 343  Q
     ||||||| ||||||||| ||||||||||||| ||||||||||    
T  10705573 ttaaacaatacattacaactcattacacatcaataaattaaat 10705615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 50 - 343
Target Start/End: Original strand, 12111277 - 12111583
Alignment:
Q  50 aaaacaattatgcagacaa-tggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaa 148  Q
    |||||||||||||||| |  ||| ||||||||||||||||||||||| ||||  | ||||| | |||||||||| ||||||||||||||| ||||| |||    
T  12111277 aaaacaattatgcagataggtgggttatgcataattctaaagcattttcaagttatttttcagtcagtttttacttgtaattaaaccagagcattttcaa 12111376  T
Q  149 aggcaa------------aatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaa 236  Q
    ||||||            |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  12111377 aggcaatataaatcatacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttataattgtccataattaaatcaaa 12111476  T
Q  237 ccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaa 336  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||   ||||||| ||||||||| |||||||| ||||||||    
T  12111477 ccgacatttggttcaaattacaccaaagtttaaaattcatcaaaacgttataaattgtccataattaaacaatacattacaactcattacatatcattaa 12111576  T
Q  337 attaaat 343  Q
    |||||||    
T  12111577 attaaat 12111583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 34742437 - 34742168
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    ||||||||||||||||||||||| || || | ||||||| |||||||||  ||||||||||||| || | | ||||| |||||||| |||||||||||||    
T  34742437 ctgcagttaactgccgaggaaaacctcggaagttaactgtcgaggaaaacaaattatgcagacagtgaactctgcatgattctaaaacatttccaagcca 34742338  T
Q  104 cttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
     ||||||| |||||||||||||||||||||  ||| |||||| |||||||||| ||   |||||||||||| |||||||| |||||| ||||||||||||    
T  34742337 tttttcggtcagtttttacctgtaattaaagtagagcatttcgaaaggcaaaaaat---tcatacaacattgaaactcggacataaacaagaaaaataca 34742241  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcat 276  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  34742240 atatcttttacaattgtccataattaaatcaaatcgacatttgattcaaattacacaaacgtttgaaattcat 34742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 603807 - 604102
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| ||||||| | ||||||| ||||||    |||||||||||| ||| || ||||||||||||| | |||||||||    
T  603807 cggcggcagttaactgccgaggaaaaccttggtagtaaactgccaaggaaatctgattatgcagacagtgggttctgcataattctaa-gtatttccaag 603905  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||| ||| |||||||  |||||  |||| |||    
T  603906 ccattttttcggccagtttttacctgtaattaaaccagaacatttccaaaggtaaaata--attcatacaagattgaaactcgaacataatgaagataaa 604003  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  604004 tacaatatcttttacaattgttcataattaaattaaatcgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 47742999 - 47742720
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttc-ggccagtttttacctgtaattaaac 134  Q
    ||||||| |||||||||   |||||||||||| ||| || |||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||    
T  47742999 ttaactgtcgaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccatttttttggccagtttttacctgtaattaaac 47742901  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||||| |||||||||||||  | |||||||||||| ||||  || || ||| |||| |||| ||||||||||||||||||||||||||||||| |    
T  47742900 cagagcattttcaaaggcaaaata--attcatacaacattgaaacatggacaaaaacaagataaatgcaatatcttttacaattgtccataattaaatta 47742803  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  47742802 aaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 47742720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 36 - 282
Target Start/End: Complemental strand, 40928963 - 40928719
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||  || |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  40928963 ttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaac 40928865  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| |    
T  40928864 cagagcatttccaaaggcaaaata--attcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 40928767  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  40928766 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaac 40928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 15070361 - 15070100
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||| ||||||||   |||||||||||| ||| || |||||||||||| | ||||||||||||| |||| |||||||||||||||||||| |||||    
T  15070361 ttaactgcngaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaaataaac 15070263  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||||||||||||| |||||  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| |    
T  15070262 cagagcatttccaaaggctaaata--attcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 15070165  T
Q  235 aaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  15070164 aaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 15070100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 273
Target Start/End: Original strand, 29592574 - 29592841
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    ||||| ||||||||||| |||||  | |||| ||||||| ||| |||||   |||||||||||| |||||| ||||||||| |||| ||||||||| |||    
T  29592574 ctgcaattaactgccgatgaaaacttcggtagttaactgtcgaagaaaactgattatgcagacagtggattctgcataattttaaa-catttccaaacca 29592672  T
Q  104 ctttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatac 202  Q
     |||| |||||||||||||||||||||||||||||| |||||||||||| ||||||  | |||||||| ||| |||||||| |||||| |||| ||||||    
T  29592673 ttttttcggccagtttttacctgtaattaaaccagagcatttccaaaggaaaaata--attcatacaagattgaaactcggacataaacaagataaatac 29592770  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaatt 273  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  29592771 aatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacttttgaaatt 29592841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 298
Target Start/End: Complemental strand, 18109781 - 18109543
Alignment:
Q  59 atgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaat 157  Q
    ||||||||| ||| || |||||||||||||| ||||||||| ||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18109781 atgcagacagtgggttctgcataattctaaa-catttccaaaccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaat 18109683  T
Q  158 ataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgaca-tttggttcaaatta 256  Q
    |  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||    
T  18109682 a--attcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaaatta 18109585  T
Q  257 cacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     ||||| ||||||||||||||||||| |||||||||||||||    
T  18109584 aacaaacgtttgaaattcatcaaaacattacaaagtgtccat 18109543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 17838605 - 17838400
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||||||||| ||||| ||||||||||||||| |||||| |||||||||| |  | ||||||||||||     
T  17838605 tgcatcattctaaaacatttccaagccttttttcggccagtatttacttgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattg 17838508  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  17838507 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 17838408  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  17838407 tcataacg 17838400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 283
Target Start/End: Original strand, 5537909 - 5538152
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||||||||||||  ||||||| ||||| ||   | ||||| |||||||| ||||| ||||||| ||||||| ||||||||||  ||||||||| |    
T  5537909 ttaactgccgaggaaaacaaattatgtagacagtgagctctgcatgattctaaaacattttcaagccatttttcggtcagtttttac--gtaattaaagc 5538006  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||| ||||| ||||||  | |||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  5538007 agagcatttcgaaagggaaaata--attcatacaacattgaaactcggacataaacaagaaaaataaaatatcttatacaattgtccataattaaatcaa 5538104  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  5538105 accgacatttggttcaaattatacaaacgtttgaaattcatcataacg 5538152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 30791053 - 30790756
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| |||||||||| |||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  30791053 cggcggcagttaactaccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 30790955  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||| ||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  30790954 ccattttttcggccattttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 30790857  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  30790856 aatagaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 30790757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 45767906 - 45767610
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  45767906 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 45767808  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  45767807 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 45767711  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  45767710 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 45767611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 13323743 - 13323480
Alignment:
Q  18 cgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtt 117  Q
    ||||||||| || || | |||||||| ||| ||||  ||||||||||| ||||   | | |||||||||||| ||||||||||||| ||||||| |||||    
T  13323743 cgaggaaaacctcgggagttaactgctgagcaaaacaaattatgcagataatgagctcttcataattctaaaacatttccaagccatttttcgggcagtt 13323644  T
Q  118 tttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaat 217  Q
    |||||||||||||||| |||| |||||| ||||| ||||||  | ||||||||| || |||||  | ||| || |||||||||||||||| |||||||||    
T  13323643 tttacctgtaattaaagcagagcatttcgaaaggtaaaata--attcatacaacgttgaaactgagacattaacaagaaaaatacaatattttttacaat 13323546  T
Q  218 tgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    | ||||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  13323545 tttccataattaaattaaaccggcatttcgttcaaattacacaaacgtttgaaattcatcataacg 13323480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 42503849 - 42503588
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    ||||||| |||||||||   |||||||||||| ||  || |||||||||||| | ||||||||||| | |||| ||||||||||||||||||||||||||    
T  42503849 ttaactgtcgaggaaaactgattatgcagacagtgagttctgcataattctaga-catttccaagctattttttcggccagtttttacctgtaattaaac 42503751  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||| ||||||||| ||  |||| |||| ||| ||| ||||||||||||||  |||| ||||||||||||||||| |||||| ||| ||||||| |    
T  42503750 cagagcatctccaaaggctaa--ataattcatgcaagattgaaactcggtcataatcaagataaatacaatatcttttataattgttcatgattaaatta 42503653  T
Q  235 aaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||| ||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  42503652 aaccaacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 42503588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 43619742 - 43620003
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||    
T  43619742 ttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccattttttcggccagtttttacctgtaattaaac 43619840  T
Q  135 cagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaat 232  Q
    |||| |||| ||||||| ||  ||||| |||||   |  ||| |||||| | |||||  |||| ||||||||||||||||||||||||  ||||||||||    
T  43619841 cagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcagacataatgaagataaatacaatatcttttacaattgttaataattaaat 43619937  T
Q  233 caaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  43619938 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 43620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 10522366 - 10522280
Alignment:
Q  197 aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  10522366 aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatcataacg 10522280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 47065148 - 47065058
Alignment:
Q  208 cttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  47065148 cttttacaattgtccataattaaatcaaaccgacatttgatttaaattacacaaaagtttgaaattcatcaaaatgttacaaagtatccat 47065058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 36186509 - 36186416
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaatt 130  Q
    ||||||||||||||||| ||||||| || ||| ||  || |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  36186509 ttaactgccgaggaaaa-caattatacatacagtgagttctgcataattctaaagcattttcaagccatttttcggtcagtttttacctgtaatt 36186416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 47776361 - 47776410
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  47776361 ggctgcagttaactgccgaggaaaacctcggtaattaactgccgaggaaa 47776410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 42682024 - 42682070
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  42682024 gctgcagttaactgccgaggaaaacctcggtaattaactgccgagga 42682070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9367769 - 9367720
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||    
T  9367769 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaa 9367720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 17840932 - 17840884
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  17840932 ctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 17840884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30355284 - 30355236
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  30355284 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 30355236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15070383 - 15070434
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  15070383 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 15070434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18105401 - 18105452
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  18105401 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 18105452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 34738393 - 34738442
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||| |||||||||||| || |||| ||||||||||||||||    
T  34738393 ggctgcagttaaatgccgaggaaaacctcggtagttaactgccgaggaaa 34738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 35606822 - 35606867
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||    
T  35606822 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 35606867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 42499440 - 42499485
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||    
T  42499440 ctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 42499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10098162 - 10098111
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || || | ||||||| |||||||||    
T  10098162 cggctgcagttaactgccgaggaaaacctcgggagttaactgacgaggaaaa 10098111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15074273 - 15074223
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||| ||||||||    
T  15074273 cggcggcagttaactgccgaggaaaacctcggtagttaactgtcgaggaaa 15074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17834515 - 17834565
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| |||||||||||||||||||||  | |||| ||||||||||||||||    
T  17834515 cggcggcagttaactgccgaggaaaacttcggtagttaactgccgaggaaa 17834565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41884171 - 41884121
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    
T  41884171 cggcggcagttaactgccgaggaaaacctcggaagttaactgccgaggaaa 41884121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47060954 - 47061000
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||||    
T  47060954 cggctgtagttaactgccgaggaaaacctcggtagttaactgccgag 47061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9365707 - 9365755
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  9365707 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 9365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10098394 - 10098442
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  10098394 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 10098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 13645386 - 13645338
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||  | || | |||||||||||||||    
T  13645386 ggctgcagttaactgccgaggaaaacttaggcagttaactgccgaggaa 13645338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19072465 - 19072513
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||| ||||||||||||||||||||  |||| | ||||||||||||||    
T  19072465 cggctacagttaactgccgaggaaaactttggcagttaactgccgagga 19072513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 25877649 - 25877941
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||| |||||||||||||||||  | |||| ||||||||||||||||| || ||||||||||| ||| || |||||||||||||||||||||||||    
T  25877649 cggctgcaattaactgccgaggaaaacttcggtagttaactgccgaggaaaa-catttatgcagacagtgggttctgcataattctaaagcatttccaag 25877747  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| |||| ||  |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  25877748 ccatttttcggccagtttttacctgtaattaaaccagagcattttcaaaagc--aatataaatcatacaacattgaaacttggtcataaacaagaaaaat 25877845  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25877846 acaatatcttttacaattgtccataattaaat--aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 25877941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 317
Target Start/End: Complemental strand, 33995189 - 33994880
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccac 104  Q
    |||| ||||||||||||||||| || || | ||||||||||||||||| || ||||||||||| ||| |||||||||||| | ||||||||||||||||     
T  33995189 tgcaattaactgccgaggaaaacctcgggagttaactgccgaggaaaa-catttatgcagacagtgggttatgcataattgttaagcatttccaagccat 33995091  T
Q  105 ttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||  ||||| | |||||||||| |||||| |||||||| ||| |||||||||    
T  33995090 ttttcggccagtttttacatgtaatttaaccagaacatttccaaaggcaa--tataacttatacaacatttaaactcagtcataaacaagtaaaatacaa 33994993  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataa 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||||| |||||||||||||||    
T  33994992 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacaaaaaagtttgaaattcttcaaatcgttacatagtgtccatgcataa 33994893  T
Q  305 acaacacattaca 317  Q
    |||||||||||||    
T  33994892 acaacacattaca 33994880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 36 - 340
Target Start/End: Original strand, 24053217 - 24053518
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||||||| ||||||| ||||||||||| ||  || ||||||||| | |||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  24053217 ttaactgccgag-aaaaacacttatgcagacagtgagttctgcataattgtcaagcattttcaagccatttttcggccagtttttacctgtaatttaacc 24053315  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| ||||| |||||||||  ||||| | |||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  24053316 agagcattttcaaaggcaa--tataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattacatcaa 24053413  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcatta 335  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||   ||||||||| ||||||| ||||||||||||||||    
T  24053414 accgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacatattacaactcattacacatcatta 24053513  T
Q  336 aatta 340  Q
    |||||    
T  24053514 aatta 24053518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 34122552 - 34122843
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||   |||||||||||| |||||| ||||||||||||||  |||| ||||    
T  34122552 cggctgcagttaactgccgaggaaaagctcggtagttaactgccgaggaaaactgattatgcagacagtggattctgcataattctaaat-attttcaag 34122650  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||  | |||||||||||| |||||||| |||||| |||| |||    
T  34122651 ccattttttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaata--attcatacaacattgaaactcggacataaacaagataaa 34122748  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  34122749 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaaggttacaaggtgt 34122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 24050055 - 24050391
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||| |||||||| ||||||||  | |||| ||||||  |||  ||||||| ||||||||| | ||  || ||||||||| | |||||||||||||    
T  24050055 cggctgcacttaactgctgaggaaaacgtcggtagttaactatcgac-aaaaacatttatgcagatagtgagttctgcataattgttaagcatttccaag 24050153  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||||||||||| || ||||||| ||||||| |||| |||||||  |||||||| | |||||||||| ||| || |||||||| ||| |||||    
T  24050154 ccatttttcggccagttttcacatgtaatttaaccagagcattaccaaagg--aaatataacttatacaacatttaaattcagtcataaacaagtaaaat 24050251  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||      
T  24050252 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtatccataa 24050351  T
Q  301 ataaacaacacattacaattcattacacatcattaaatta 340  Q
     ||||||||||||||||| |||||||||||||||||||||    
T  24050352 ttaaacaacacattacaactcattacacatcattaaatta 24050391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 317
Target Start/End: Original strand, 7796694 - 7796919
Alignment:
Q  90 gcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataa 189  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||| ||||    
T  7796694 gcatttccaagctatttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggttataa 7796791  T
Q  190 ataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaa 289  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7796792 acaagaaaaatacaatatcttttataattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaa 7796891  T
Q  290 agtgtccatgcataaacaacacattaca 317  Q
    |||||||||   |||||||| |||||||    
T  7796892 agtgtccataattaaacaactcattaca 7796919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 4 - 317
Target Start/End: Original strand, 25890025 - 25890336
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    |||||||||||| |||||||||| || |||| | |||||||||||||||   |||||||||||||    || |||||||||||||| |||||||||||||    
T  25890025 ctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatgcagacaacaagttctgcataattctaaa-catttccaagcca 25890123  T
Q  104 ctttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatac 202  Q
     |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||| |||| ||||||    
T  25890124 ttttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataaacaagataaatac 25890221  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcat 302  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||| |||   |    
T  25890222 aatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgttcataatt 25890321  T
Q  303 aaacaacacattaca 317  Q
    ||||||| |||||||    
T  25890322 aaacaactcattaca 25890336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 37814610 - 37814905
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||| ||||    || ||||||||| ||| || |||||| ||||||| ||||||||||    
T  37814610 cggcggcagttaactgccgaggaaaaccttggtagttaactgccgaagaaatctgataatgcagacagtgggttctgcatagttctaaa-catttccaag 37814708  T
Q  101 ccacttttc-ggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  37814709 ccatttttccggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataag 37814806  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  37814807 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 37814905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 34080141 - 34079862
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||| ||||||||   |||||||||||| ||| || |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  34080141 ttaactgcagaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaac 34080043  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |    
T  34080042 cagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 34079945  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  34079944 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 34079862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 7017540 - 7017834
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||  | ||||||| || |||| |||||||||||||||||   |||||||||||| ||| |  |||||||||||||| ||||| ||||    
T  7017540 cggctgcagttaactctcaaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattctaaa-cattttcaag 7017637  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  7017638 ccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataag 7017735  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  7017736 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 7017834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 27863466 - 27863745
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||| | ||| || |||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||    
T  27863466 ttaactgccgaggaaaactgattatgcagatagtgggttctgcataattctaaa-cattttcaagccattttttcggccagtttttacctgtaattaaac 27863564  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    ||||||||||||||||||||||||  | ||| |||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |    
T  27863565 cagaacatttccaaaggcaaaata--attcacacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 27863662  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  27863663 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 27863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 31 - 283
Target Start/End: Original strand, 38407205 - 38407454
Alignment:
Q  31 ggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaatt 130  Q
    |||| ||||||||||| |||||  ||||||| ||||| ||   | ||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38407205 ggtagttaactgccgaagaaaacaaattatgtagacagtgagctctgcatgattctaaaacatttccaagcca-ttttcggccagtttttacctgtaatt 38407303  T
Q  131 aaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaa 230  Q
    ||| ||||||||||| ||||||||||||  | |||||||||||| |||||| | |||||| |||||||||||||||||||||| ||||||||||||||||    
T  38407304 aaagcagaacatttcgaaaggcaaaata--attcatacaacattgaaactcagacataaacaagaaaaatacaatatcttttagaattgtccataattaa 38407401  T
Q  231 atcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  38407402 atcaaaccggcatttggttcaaattacacaaacgtttgaaattcatcataacg 38407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 3 - 260
Target Start/End: Complemental strand, 28388562 - 28388307
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcc 102  Q
    |||||||||||||||||||||||| || |||| ||||||||||| |||||   |||||||||||| ||| || ||||||||| |||| ||||||||||||    
T  28388562 gctgcagttaactgccgaggaaaacctcggtagttaactgccgaagaaaactgattatgcagacagtgggttctgcataattttaaa-catttccaagcc 28388464  T
Q  103 actttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaata 201  Q
    | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| ||| |||| |||||| || | |||||    
T  28388463 attttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaattcggacataaacaaaataaata 28388366  T
Q  202 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaca 260  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28388365 caatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacaca 28388307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 49 - 343
Target Start/End: Original strand, 30352503 - 30352788
Alignment:
Q  49 aaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaa 148  Q
    ||||||||||||||||||| || ||| ||||||||| | |||||||| ||||||| ||||||  ||||||||| |||||| |||| |||| |||||||||    
T  30352503 aaaaacaattatgcagacagtgaattttgcataattgttaagcattttcaagccatttttcgatcagtttttatctgtaaataaatcagagcatttccaa 30352602  T
Q  149 aggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggt 248  Q
    | ||||  |||||  ||||||||||| |||||| ||||||||  ||||||||||||||||||||     |||||||||||||||||||||  ||||||||    
T  30352603 atgcaa--tataagccatacaacatttaaactcagtcataaa--agaaaaatacaatatctttt-----tgtccataattaaatcaaaccagcatttggt 30352693  T
Q  249 tcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||   |||||| |||||||||| |||||||| |||| ||||||||||    
T  30352694 tcaaaatacacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacagcacattacaactcattacatatcaataaattaaat 30352788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 13563704 - 13563983
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||| ||   |||||||||||| ||| || ||||||||| |||| ||||||||||||| |||| |||| |||||||||||||||||||||    
T  13563704 ttaactgccgaggagaactgattatgcagacagtgggttctgcataattataaa-catttccaagccattttttcggctagtttttacctgtaattaaac 13563802  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |    
T  13563803 cagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 13563900  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||   |||||||| |||||||    
T  13563901 aaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtgtccataattaaacaactcattaca 13563983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 38855778 - 38856038
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||||||||||||   |||||||||||| ||| || |||||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||    
T  38855778 ttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccatttttcggtcagtttttacctgtaattaaacc 38855876  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    |||  |||||||||||| |||||  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| | ||||||||| ||    
T  38855877 agacaatttccaaaggctaaata--attcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcgtaattaaattaa 38855974  T
Q  236 accgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||| ||||||| | |||| ||||| ||||||||||||||||||| |||||||||||||||    
T  38855975 accgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 38856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 36 - 295
Target Start/End: Complemental strand, 1039815 - 1039558
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggc-cagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||  || |||||||| |||||  |||||||||||| |||| ||  ||||||||||||||||||||||    
T  1039815 ttaactgccgaggaaaactgattatgcagacagtgagttctgcataatcctaaat-atttccaagccattttttgggtcagtttttacctgtaattaaac 1039717  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||||| |||||||||||||  | |||||||| ||| |||||||| |||||| | || |||||||||||||||||||||||||||||||||||| |    
T  1039716 cagagcattttcaaaggcaaaata--attcatacaagattgaaactcggacataaacacgataaatacaatatcttttacaattgtccataattaaatta 1039619  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||||    
T  1039618 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtc 1039558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 37 - 298
Target Start/End: Original strand, 28882058 - 28882311
Alignment:
Q  37 taactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||  |||||||||| || | | || | ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  28882058 taactgccgaggaaaactaattatgcagccagtaggttctacataattctaa-gcatttccaagccattttttcggccagtttttacctgtaattaaacc 28882156  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| ||||| ||||||||||        ||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| ||    
T  28882157 agagcatttacaaaggcaaa--------catacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaa 28882248  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  28882249 accgacatttcgttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 28882311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 283
Target Start/End: Complemental strand, 7762285 - 7762008
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccac 104  Q
    |||||||||||| ||||||||| ||  | | |||||||||||||||||   ||||||||| || ||   | ||||| |||||||| ||||| ||||||      
T  7762285 tgcagttaactgtcgaggaaaacctcaggagttaactgccgaggaaaattgattatgcaggcagtgagctctgcatcattctaaaacattttcaagcctt 7762186  T
Q  105 tttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
    |||| |||||||||||||||||||||||||||| | |||||  |||||||||| |  | |||||||||||| |||||||  |||||| |||| | |||||    
T  7762185 tttttcggccagtttttacctgtaattaaaccaaagcattttgaaaggcaaaaca--attcatacaacattgaaactcgaacataaacaagatagataca 7762088  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  7762087 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcataacg 7762008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 36 - 292
Target Start/End: Original strand, 11029071 - 11029326
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||| || |||||||||||| | ||||||||||||| |||| || |||||||||||||||||||||||    
T  11029071 ttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcgaccagtttttacctgtaattaaac 11029169  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    ||||  |||||||||||| |||||  | |||||||| ||| ||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||| |    
T  11029170 cagacaatttccaaaggctaaata--attcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaaatta 11029267  T
Q  235 aaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagt 292  Q
    |||||||| ||||||| | |||| ||||| ||||||||||||||||||| |||||||||    
T  11029268 aaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagt 11029326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 83 - 283
Target Start/End: Complemental strand, 41799731 - 41799534
Alignment:
Q  83 ttctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcg 182  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||  | |||||||||||| ||||| |    
T  41799731 ttctaaaacattttcaagccatttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaata--attcatacaacattgaaacttg 41799634  T
Q  183 gtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    | |||||| |||||||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| |||    
T  41799633 gacataaacaagaaaaatacaattt-ttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcatcataac 41799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 34 - 210
Target Start/End: Original strand, 4196616 - 4196790
Alignment:
Q  34 aattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaa 133  Q
    ||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||    
T  4196616 aattaactgccgaggaaaa-caattatgcagacagtgggttctgcataattctaaagcatttccaagctatttttcggtcaatttttacctgtaattaaa 4196714  T
Q  134 ccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataag-aaaaatacaatatctt 210  Q
    ||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  4196715 ccagagcatttccaaaggc--aatataaatcatacaacattgaaactcggtcataaacaagaaaaaatacaatatctt 4196790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 96 - 343
Target Start/End: Complemental strand, 43179849 - 43179605
Alignment:
Q  96 ccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataaga 195  Q
    |||||||| ||||||| |||||||||||||||||| ||||||| ||||| |||||||||  ||  | || ||||||||| | ||||||||| ||| ||||    
T  43179849 ccaagcca-ttttcggtcagtttttacctgtaattcaaccagagcattttcaaaggcaa--tactagtcgtacaacatttatactcggtcaaaaacaaga 43179753  T
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    |||||| | ||||||||||| ||||||||||||||  ||| || |||||| ||| ||||||||| || ||||||||||||||||||||||| | ||||||    
T  43179752 aaaatatattatcttttacacttgtccataattaatacaatccaacatttcgttaaaattacacgaatgtttgaaattcatcaaaacgttaaagagtgtc 43179653  T
Q  296 catgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||   |||||||||||||||||  ||||| | ||  |||||||||||    
T  43179652 cataattaaacaacacattacaacacattatatattgttaaattaaat 43179605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14280945 - 14280797
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||| ||||||||||   |||||||||||||   | || ||||||||||||| | |||||||||    
T  14280945 cggcggcagttaactgccgaggaaaacctcggtagttaacggccgaggaaatttaattatgcagacagcaggttctgcataattctaa-gtatttccaag 14280847  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaa 149  Q
    ||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  14280846 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaa 14280797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 317
Target Start/End: Original strand, 6267612 - 6267816
Alignment:
Q  111 gccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatctt 210  Q
    |||| ||||||||| ||||| | ||||| |||||||||||||||  ||  | || ||||||||| |  ||| |||||||| |||||||||||| ||||||    
T  6267612 gccattttttacctataattcagccagagcatttccaaaggcaa--tactagtcgtacaacatttatcctcagtcataaacaagaaaaatacattatctt 6267709  T
Q  211 ttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaaca 310  Q
    ||||  || |||||||||||||||| |||||||||  || ||||| ||  || ||||||||||||||| ||| ||| | |||||||||   |||||||||    
T  6267710 ttaccgttatccataattaaatcaatccgacatttcattaaaattgcaagaatgtttgaaattcatcataacattaaagagtgtccataattaaacaaca 6267809  T
Q  311 cattaca 317  Q
    |||||||    
T  6267810 cattaca 6267816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 4196792 - 4196858
Alignment:
Q  251 aaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||   |||||||| |||||||    
T  4196792 aaattacacaaacgtttggtattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 4196858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19037515 - 19037467
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  19037515 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 19037467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7757353 - 7757403
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||| || | || ||||||||||||||||    
T  7757353 cggctgcagttaactgccgaggaaaacctcgctagttaactgccgaggaaa 7757403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28238167 - 28238217
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  28238167 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 28238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13837752 - 13837801
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||    
T  13837752 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaa 13837801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 16440281 - 16440192
Alignment:
Q  183 gtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaat 272  Q
    |||||||| ||||| ||||||  || ||||| ||||| ||||||||||||||| |||| |||| ||| ||||||||| || |||| ||||    
T  16440281 gtcataaacaagaacaatacataatattttagaattgaccataattaaatcaatccgatatttcgttaaaattacacgaatgtttaaaat 16440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 25497540 - 25497585
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    ||||||||||||||||||||||||| || |||| ||||||||||||    
T  25497540 ggctgcagttaactgccgaggaaaatctcggtagttaactgccgag 25497585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 31094599 - 31094651
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaa 89  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  31094599 ttaactgccgaagaaaa-caattatgcagacagtggattctgcataattctaaa 31094651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35671110 - 35671159
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||||||||  |||| | |||||||||||||||    
T  35671110 cggctgcagttaactgccgaggaaaactttggcagttaactgccgaggaa 35671159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18307282 - 18307330
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||||||    
T  18307282 cggctgtagttaactgccgaggaaaacctcggtagttaactgccgagga 18307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28880350 - 28880398
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||  ||||||||||||||| || |||||||||||||||||||    
T  28880350 cggctgcagcaaactgccgaggaaaacctcggtaattaactgccgagga 28880398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 27659976 - 27660019
Alignment:
Q  9 gttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  27659976 gttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 27660019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34123980 - 34123933
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||||||||||||||| ||||||| || |||| |||||||||||||    
T  34123980 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgagg 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 38968123 - 38968170
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||||||||||||||||||||||| || | || |||||||||||||    
T  38968123 cggctgcagttaactgccgaggaaaacctcgatagttaactgccgagg 38968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41798846 - 41798897
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||| ||||| || |||| ||| |||||||||||||    
T  41798846 cggctgcagttaactgccgaagaaaacctcggtagttatctgccgaggaaaa 41798897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42539418 - 42539375
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgcc 44  Q
    ||||||||||||||||||||||||||  |||||| |||||||||    
T  42539418 cggctgcagttaactgccgaggaaaactttggtagttaactgcc 42539375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 11346037 - 11346083
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||| || |||| ||||||| ||||||    
T  11346037 gctgcagttaactgccgaggaaaacctcggtagttaactgtcgagga 11346083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 298
Target Start/End: Complemental strand, 14280762 - 14280728
Alignment:
Q  264 gtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||| |||||||||||||||    
T  14280762 gtttgaaattcatcaaaacattacaaagtgtccat 14280728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18538380 - 18538334
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    ||||||||||||||||||||||||||  | |||| ||||||||||||    
T  18538380 cggctgcagttaactgccgaggaaaacttcggtagttaactgccgag 18538334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25897124 - 25897074
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||| ||||||  || |||| ||||||||||||||||    
T  25897124 cggctgcagttaactgcccaggaaatcctcggtagttaactgccgaggaaa 25897074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38855756 - 38855706
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||| ||||||    
T  38855756 cggcggcagttaactgccgaggaaaacctcggtagttaactgccaaggaaa 38855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8577007 - 8577052
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||| || |||| ||||||||||||||||    
T  8577007 gcagttaactgccgaagaaaacctcggtagttaactgccgaggaaa 8577052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 30292313 - 30292382
Alignment:
Q  212 tacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaa 281  Q
    |||||||| ||| |||||||||||  |||||||| ||| ||||||||| || ||| |||||||| |||||    
T  30292313 tacaattgaccaaaattaaatcaattcgacatttcgttaaaattacacgaatgttcgaaattcaacaaaa 30292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 31787559 - 31787600
Alignment:
Q  12 aactgccgaggaaaaacttggtaattaactgccgaggaaaaa 53  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  31787559 aactgccgaggaaaacctcggtagttaactgccgaggaaaaa 31787600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40789252 - 40789203
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||||||||  || | | |||||||||||||||    
T  40789252 cggctgcagttaactgccgaggaaaattttagcagttaactgccgaggaa 40789203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41201756 - 41201797
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactg 42  Q
    |||||||||||||||||||||||||| || |||| |||||||    
T  41201756 cggctgcagttaactgccgaggaaaacctcggtagttaactg 41201797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 8088 - 8044
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||| || |||| |||||| |||||||    
T  8088 tgcagttaactgccgaggaaaatctcggtagttaactaccgagga 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 542835 - 542787
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||| |||||||||||||||  || |||| ||||||||||||||    
T  542835 cggctgcagctaactgccgaggaaactctcggtagttaactgccgagga 542787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 3603192 - 3603148
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||| |||||||||| || |||| |||||||||||    
T  3603192 ggctgcagttaacttccgaggaaaacctcggtagttaactgccga 3603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 4204254 - 4204210
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||| ||||||||| || |||| ||||||||||||    
T  4204254 gctgcagttaactgtcgaggaaaacctcggtagttaactgccgag 4204210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19035266 - 19035314
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  19035266 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 19035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30708931 - 30708979
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||| ||| || || | ||||||||||||||    
T  30708931 cggctgcagttaactgccgagggaaacctcgggagttaactgccgagga 30708979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 6489357 - 6489652
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||||||    
T  6489357 cggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaaaa-caattatgcagacagtgggttctgcataattctaaagcatttccaag 6489455  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||||||||||||||  ||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||    
T  6489456 ccatttttcggccagtttttaccgctaattaaaccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaat 6489553  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttac-aaagtgtccat 298  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||    
T  6489554 acattatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcattgaaacgttacaaaagtgtccat 6489652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 56 - 343
Target Start/End: Original strand, 66956 - 67241
Alignment:
Q  56 attatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaa 155  Q
    |||||||||||| ||| || ||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||| || | ||||| ||||     
T  66956 attatgcagacagtgggttctgcataattgttaagcatttccaagccatttttcggtcagtttttacctgtaattaaaccagagcaatcccaaatgcaa- 67054  T
Q  156 atataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatt 255  Q
     ||||| |||||||||||| ||||||  | ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  67055 -tataattcatacaacatttaaactcacttataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaact 67153  T
Q  256 acacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||| |||| |||||||||   ||||||||||||||||| ||||||||||||||||||| ||||    
T  67154 acacaaaagtttgaaattcatcaaaacggtacatagtgtccataattaaacaacacattacaactcattacacatcattaaatgaaat 67241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 317
Target Start/End: Original strand, 21951866 - 21952141
Alignment:
Q  39 actgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccaga 138  Q
    |||||||||||||| ||||||||||||||   | || |||| ||||||||| || |||||||||| ||||||||||||||| || |||||||||||||||    
T  21951866 actgccgaggaaaa-caattatgcagacagcaggttctgcagaattctaaaacaattccaagccatttttcggccagttttgacttgtaattaaaccaga 21951964  T
Q  139 acatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaacc 238  Q
     |||||||||| ||||  |||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21951965 gcatttccaaatgcaa--tataaatcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaacc 21952062  T
Q  239 gacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||  |||||||| |||||||    
T  21952063 gacatttgattaaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccatgattaaacaactcattaca 21952141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4002550 - 4002258
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || || | |||||||||||||||||   ||||||||||||     || |||||||||||||| ||||||||||    
T  4002550 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttccaag 4002452  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||| ||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||| |||| |||    
T  4002451 ccattttttcggcaagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataaacaagataaa 4002354  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||||    
T  4002353 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtc 4002258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 600589 - 600309
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||| ||||||||| || |||| ||||||||||||||||    || |||||| || ||   | ||||| |||||||| ||||||||||    
T  600589 cggccgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaatctgatcatgcaggcagtgagctctgcatgattctaaaacatttccaag 600490  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||||| ||||||||||||||||||||||| |||||  ||||||||||||  | |||||||||||| |||||||| |||||| |||||||||    
T  600489 ccatttttcggccaatttttacctgtaattaaaccagagcatttttaaaggcaaaata--attcatacaacattgaaactcggacataaacaagaaaaat 600392  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  600391 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcataacg 600309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 7841158 - 7841418
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||| ||| ||| ||||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||||||    
T  7841158 ttaactgccgaggaaaactgattatgcaaacagtgggttatgcataattctaaa-catttccaagccattttttcgaccagtttttacctgtaattaaac 7841256  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||||||| |||||| | |||||| |||| ||||||| |||||||||||||||||||||| ||||| |    
T  7841257 cagagcatttccaaaggcaaaata--attcatacaacattgaaactcagacataaacaagataaatacagtatcttttacaattgtccataagtaaatta 7841354  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  7841355 aaccgacatttggttaaaattacacaaacgtttaaaattcatcaaaacgttacaaagtgtccat 7841418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 6745371 - 6745076
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||| ||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  6745371 cggcggcagttaactgccaaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 6745273  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||||| ||| |||||||| |||||  |||| |||    
T  6745272 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatacaagattgaaactcggacataatgaagataaa 6745175  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  6745174 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 6745076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 283
Target Start/End: Original strand, 50213488 - 50213765
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttgg-taattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcc 102  Q
    ||||| |||||||||||| |||||||| | || || | ||||||||||||  ||||||| ||||| ||   | ||||| |||||||| |||||| ||||     
T  50213488 ctgcacttaactgccgag-aaaaacttcgatagttcattgccgaggaaaacaaattatggagacagtgagctctgcatgattctaaaacatttctaagct 50213586  T
Q  103 acttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatac 202  Q
    | ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||  | |||||||||||| |||||||| |||||| ||||||||| |    
T  50213587 atttttcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaata--attcatacaacattgaaactcggacataaacaagaaaaatgc 50213684  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  50213685 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcataacg 50213765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 36812865 - 36813160
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||| |||||||||| || |||| | |||||||||||||||   ||| ||||||||    ||| |||||||||||||| ||||||||||    
T  36812865 cggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattgtgcagacagcaaattctgcataattctaaa-catttccaag 36812963  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||  |  ||||||| ||| |||||||| |||||| |||| |||    
T  36812964 ccattttttcggccagtttttacctgtagttaaaccagagcatttccaaaggcaaaata--atccatacaagattgaaactcggacataaacaagataaa 36813061  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||| ||||| ||||||||| |||||    
T  36813062 tacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtttccat 36813160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 48246440 - 48246753
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||| ||||||||| || |||| |||||||||||||||||    ||||||||||| ||  |  |||||||||||||| ||||| ||||    
T  48246440 cggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaactgtttatgcagacagtgtgtg-tgcataattctaaa-cattttcaag 48246537  T
Q  101 ccacttttc-ggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||  | ||||| |||||| |||||| | |||||  || | |||    
T  48246538 ccatttttccggtcagtttttacctgtaattaaaccagagcattttcaaaggcaaaata--attcataaaacattgaaactcagacataagcaatataaa 48246635  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatg 299  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||  |||||||||||||||     
T  48246636 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacttttgaaattcatcaaaaaattacaaagtgtccata 48246735  T
Q  300 cataaacaacacattaca 317  Q
      |||||||| |||||||    
T  48246736 attaaacaactcattaca 48246753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 76 - 298
Target Start/End: Original strand, 9426707 - 9426928
Alignment:
Q  76 tgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatt 174  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||    
T  9426707 tgcataattataaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagatt 9426804  T
Q  175 aaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattc 274  Q
     |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||    
T  9426805 gaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattc 9426904  T
Q  275 atcaaaacgttacaaagtgtccat 298  Q
    |||||||| |||||||||||||||    
T  9426905 atcaaaacattacaaagtgtccat 9426928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 13743330 - 13743589
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||| ||||| ||| || |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  13743330 ttaactgccgaggaaaactgattatgtagacagtgggttctgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaac 13743428  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
     ||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |    
T  13743429 tagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaatta 13743526  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  13743527 aaccgacatttggtt-aaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 13743589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 36134253 - 36134048
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| |||||||||||   ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||  | ||||||||||||     
T  36134253 tgcatcattctaaaacatttccaagctttttttcggccagtttttacctgtaattaaatcagagcatttcgaaaggcaaaata--attcatacaacattg 36134156  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  36134155 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 36134056  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  36134055 tcataacg 36134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 76 - 298
Target Start/End: Original strand, 46989615 - 46989835
Alignment:
Q  76 tgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatt 174  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||| |  |||| |||||||||||||  | ||||||||   |    
T  46989615 tgcataattctaaa-catttccaagccattttttcggccagtttttacctgtaattaaaccaaagtattttcaaaggcaaaata--attcatacaaatgt 46989711  T
Q  175 aaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattc 274  Q
     |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  46989712 gaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacatttgaaattc 46989811  T
Q  275 atcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||    
T  46989812 atcaaaacgttacaaagtgtccat 46989835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 3953260 - 3952964
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  3953260 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 3953162  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaa 198  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||    
T  3953161 ccatttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagataa 3953064  T
Q  199 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| | | | ||||||||||||||||||| |||||||||||||||    
T  3953063 atacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccat 3952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 42166382 - 42166177
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||  |||||||||| |  | ||||||||||||     
T  42166382 tgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagagcattttgaaaggcaaaaca--attcatacaacattg 42166285  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |    
T  42166284 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacactaatgtttgaaattta 42166185  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  42166184 tcataacg 42166177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 47070496 - 47070776
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||| |||||||| ||||||||||  |  ||| |||||||||||| |||    ||||||||| || ||   | | ||| |||||||| ||||||||||    
T  47070496 cggctgtagttaacttccgaggaaaacatccgtagttaactgccgagaaaatctgattatgcagtcagtgagctctacatgattctaaaacatttccaag 47070595  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||| |  | |||||||||||| |||||||  |||||| |||| ||||    
T  47070596 ccatttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattgaaactcgaacataaacaagataaat 47070693  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  47070694 acaatatcttttccaattgtccataattaaatcaaaccgacgtttggttcaaattacacaaacgtttgaaattcatcataacg 47070776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 6 - 298
Target Start/End: Original strand, 30943222 - 30943514
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccact 105  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |    
T  30943222 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccatt 30943320  T
Q  106 ttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatac 202  Q
    ||| |||||||||||||||||||||||||||||| |||||||||| | ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||||||    
T  30943321 ttttcggccagtttttacctgtaattaaaccagagcatttccaaaagtaa--tataattcatatgtatgattgaaactcggacataatgaagataaatac 30943418  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  30943419 aatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 30943514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 298
Target Start/End: Complemental strand, 2857953 - 2857732
Alignment:
Q  76 tgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatt 174  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||    
T  2857953 tgcataattgtaaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagatt 2857856  T
Q  175 aaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattc 274  Q
     ||||| || |||||  |||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||    
T  2857855 gaaacttggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattc 2857756  T
Q  275 atcaaaacgttacaaagtgtccat 298  Q
    |||  ||| |||||||||||||||    
T  2857755 atcttaacattacaaagtgtccat 2857732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 76 - 276
Target Start/End: Complemental strand, 9473919 - 9473721
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||| |  | ||||||||||||     
T  9473919 tgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagatcatttcgaaaggcaaaaca--attcatacaacattg 9473822  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| || | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  9473821 aaactcggacataaacaatataaatacaatatctattacaattatccataattaaatcaaaccgacatttggttcaagttacacaaacgtttgaaattca 9473722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 283
Target Start/End: Original strand, 2271463 - 2271663
Alignment:
Q  82 attctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactc 181  Q
    |||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||| |  | |||||||||||| |||||     
T  2271463 attctaaaacattttcaagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattgaaactt 2271560  T
Q  182 ggtcataaataaga-aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    || |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| |    
T  2271561 ggacataaacaagataaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattagacaaacgtttaaaattcatcata 2271660  T
Q  281 acg 283  Q
    |||    
T  2271661 acg 2271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 76 - 273
Target Start/End: Original strand, 52387902 - 52388097
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||  |  | ||||||||||||     
T  52387902 tgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaacca--attcatacaacattg 52387999  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaatt 273  Q
    |||||||| |||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  52388000 aaactcggacataaacaatataaatacaatatcttttacaattgaccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaatt 52388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 16647183 - 16646939
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||   |||||||||| || ||   | ||||| |||||||| ||||||||||||| ||| |||||| |||||| |||||||||||||    
T  16647183 ttaactgccgaggaaatctaattatgcaggcagtgagctctgcatgattctaaaacatttccaagccattttccggccaatttttatctgtaattaaacc 16647084  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||| |||||||||| |  | |||||||||||| |||||| | |||||| |||| ||||| |||||||||||| ||||||||||||||||||||    
T  16647083 agagcatttcgaaaggcaaaaca--attcatacaacattgaaactcagacataaa-aagataaatataatatcttttacgattgtccataattaaatcaa 16646987  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  16646986 accgacatttggtttaaattacacaaacgtttgaaattcatcataacg 16646939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 8156536 - 8156832
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  8156536 cggcggcagttaactgccgaggaaaacctcggcagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 8156634  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  8156635 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 8156731  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  8156732 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 8156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 280
Target Start/End: Complemental strand, 50957702 - 50957461
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||| |  ||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||     
T  50957702 ttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattttaaa-catttccaagccattttttcggccagtttttacctgtaattaaat 50957605  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| ||||||||||| |    
T  50957604 cagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 50957507  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    ||| ||||||||||| |||||| ||||| |||||||||||||||||    
T  50957506 aacagacatttggttaaaattaaacaaacgtttgaaattcatcaaa 50957461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 14403011 - 14402808
Alignment:
Q  31 ggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaat 129  Q
    |||| |||||||||||||||||   |||||||| ||| ||  || |||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  14403011 ggtagttaactgccgaggaaaactgattatgca-acagtgagttctgcataattctaaa-catttccaaaccattttttcggccagtttttacctgtaat 14402914  T
Q  130 taaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataatta 229  Q
    ||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  14402913 taaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataatta 14402816  T
Q  230 aatcaaac 237  Q
    ||| ||||    
T  14402815 aattaaac 14402808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 2743426 - 2743611
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || || | |||||||||||||||||   |||||||||||| ||| |  ||||||| | |||| |||||| |||    
T  2743426 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataaatgtaaa-catttcgaag 2743523  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataa 189  Q
    ||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||||  |||| |||||||| ||| |||||||| |||||    
T  2743524 ccattttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaa--ataattcatacaagattgaaactcggacataa 2743611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 4004947 - 4005058
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| |||||||||||   |||||||||||||||||| ||||||||||||||| |||||| |||||||||  | || ||||||||||||     
T  4004947 tgcatcattctaaaacatttccaagcattttttcggccagtttttacatgtaattaaaccagagcatttcgaaaggcaaa--acaattcatacaacattg 4005044  T
Q  176 aaactcggtcataa 189  Q
    |||||||| |||||    
T  4005045 aaactcggacataa 4005058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 2743678 - 2743746
Alignment:
Q  212 tacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  2743678 tacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 2743746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 7314585 - 7314683
Alignment:
Q  184 tcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    ||||||||||||| ||||||  |||||| ||||||| ||| |||||||||||  |||||||| ||| |||||| || || |||||||||||| ||||||    
T  7314585 tcataaataagaacaatacataatctttcacaattgaccaaaattaaatcaattcgacattttgttaaaattatacgaatgtttgaaattcaacaaaac 7314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34049108 - 34049157
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||    
T  34049108 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaa 34049157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54389823 - 54389872
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||    
T  54389823 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaa 54389872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2647744 - 2647696
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  2647744 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 2647696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4004848 - 4004800
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  4004848 cggctgcagttaactgccgaggaaaacctcggtacttaactgccgagga 4004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41803026 - 41803074
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  41803026 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 41803074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43476220 - 43476268
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  43476220 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 43476268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34691653 - 34691704
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||| ||||||||| || |||| |||||||||||||||||    
T  34691653 cggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaa 34691704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41844409 - 41844358
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  41844409 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 41844358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43478875 - 43478824
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||||||  | |||| |||||||||||||||||    
T  43478875 cggctgcagttaactgccgaggaaaacttcggtagttaactgccgaggaaaa 43478824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35743627 - 35743577
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  35743627 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 35743577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46697739 - 46697789
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  46697739 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 46697789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50477208 - 50477258
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  50477208 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 50477258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19440284 - 19440329
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  19440284 cggctgcagttaactgccgaggaaaacctcggtagttaactgccga 19440329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41579769 - 41579724
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  41579769 cggctgcagttaactgccgaggaaaacctcggtagttaactgccga 41579724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49140892 - 49140843
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  49140892 cggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggaa 49140843  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 20485575 - 20485527
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||||||||||||  | || |||||||||||||||||    
T  20485575 ggctgcagttaactgccgaggaaaacttcggcaattaactgccgaggaa 20485527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49219836 - 49219796
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaact 41  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  49219836 cggctgcagttaactgccgaggaaaaccttggtagttaact 49219796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 55385165 - 55385213
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||||    
T  55385165 cggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagga 55385213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8475854 - 8475905
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||| ||||||||    
T  8475854 cggcggcagttaactgccgaggaaaacctcggtagttaactgctgaggaaaa 8475905  T

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Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16484501 - 16484450
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||||||  | || | |||||||||||||||||    
T  16484501 cggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaa 16484450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20918056 - 20918009
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    ||||| |||||||||||||||||||| || |||| |||||||||||||    
T  20918056 cggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20927018 - 20926971
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    ||||| |||||||||||||||||||| || |||| |||||||||||||    
T  20927018 cggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44227140 - 44227187
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||| ||||||||||||||||||| || |||| |||||||||||||    
T  44227140 cggctggagttaactgccgaggaaaacctcggtagttaactgccgagg 44227187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48888768 - 48888811
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgcc 44  Q
    |||||||||||||||||||||||||| || |||| |||||||||    
T  48888768 cggctgcagttaactgccgaggaaaatctcggtagttaactgcc 48888811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9429893 - 9429843
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||| | |||||||||| || |||| |||||||||||||||||    
T  9429893 ggctgcagttaagtaccgaggaaaacctcggtagttaactgccgaggaaaa 9429843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29918386 - 29918340
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||| || | || ||||||||||||    
T  29918386 cggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29918340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29967539 - 29967493
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||| || | || ||||||||||||    
T  29967539 cggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29967493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42165191 - 42165241
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||||    
T  42165191 cggcggcagttaattgccgaggaaaacctcggtagttaactgccgaggaaa 42165241  T

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Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46989575 - 46989617
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgc 43  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  46989575 cggctgcagttaactgccgaggaaaacctcggtagttaactgc 46989617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48250914 - 48250868
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||| || || | ||||||||||||    
T  48250914 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgag 48250868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49144501 - 49144451
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||| ||||| || |||| ||||||||||||||||    
T  49144501 cggcggcagttaactgccgaagaaaacctcggtagttaactgccgaggaaa 49144451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6143699 - 6143748
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||||||||  | || | |||||||||||||||    
T  6143699 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggaa 6143748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10658851 - 10658900
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||| ||||||||||||||||  |||| | |||||||||||||||    
T  10658851 cggctgcagctaactgccgaggaaaactttggcagttaactgccgaggaa 10658900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 36134354 - 36134399
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||||||||||| || || | ||||||||||||||    
T  36134354 ctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 36134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45075374 - 45075423
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||| |||||||||||||||||||  |||| | |||||||||||||||    
T  45075374 cggctggagttaactgccgaggaaaactttggcagttaactgccgaggaa 45075423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46347766 - 46347725
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactg 42  Q
    |||||||||||||||||||||||||| || | ||||||||||    
T  46347766 cggctgcagttaactgccgaggaaaacctcgataattaactg 46347725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 1293410 - 1293454
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||| || || | |||||||||||||||    
T  1293410 gcagttaactgccgaggaaaacctcgggagttaactgccgaggaa 1293454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2950394 - 2950442
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  2950394 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 2950442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 4015167 - 4015123
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||| || || | |||||||||||||||||    
T  4015167 agttaactgccgaggaaaacctcggaagttaactgccgaggaaaa 4015123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 13896920 - 13896876
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||| ||||||||| || |||| |||||||||||    
T  13896920 ggctgcagttaactgtcgaggaaaacctcggtagttaactgccga 13896876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42760254 - 42760210
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccg 45  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||    
T  42760254 cggctgtagttaactgccgaggaaaacctcggtagttaactgccg 42760210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49138642 - 49138690
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  49138642 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 49138690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 54392073 - 54392025
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  54392073 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 54392025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 55207704 - 55207660
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||| |||| || ||||||| ||||||||||||||    
T  55207704 tgcagttaactgcctaggacaaccttggtagttaactgccgagga 55207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 343
Target Start/End: Complemental strand, 1656131 - 1655795
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcca 103  Q
    ||||||||||||| |||| |||| || |||| ||||||||||||||||| || ||||||||||| ||| || ||||||||| | ||||| || |||||||    
T  1656131 ctgcagttaactgtcgagaaaaacctcggtagttaactgccgaggaaaa-catttatgcagacagtgggttctgcataattgttaagcactttcaagcca 1656033  T
Q  104 cttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
     |||||||||||||||||||||||||| || |||| |||||||||||||||  ||||| | |||||||||| ||| |  |||||||| ||| ||||||||    
T  1656032 tttttcggccagtttttacctgtaatttaatcagagcatttccaaaggcaa--tataacttatacaacatttaaatttagtcataaacaagtaaaataca 1655935  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcata 303  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1655934 atatcttttacaattgtccataattaaatcaaacggacatttggttcaaaatacacaaaagtttgaaattcatcaaatcgttacatagtatccatgcata 1655835  T
Q  304 aacaacacattacaattcattacacatcattaaattaaat 343  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1655834 aacaacacattacaactcattacacatcattaaattaaat 1655795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 8459021 - 8459299
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  8459021 ttaactgccgaggaaaa-caattatgcagacagtgggttctgcataattctaaagcatttctaagccatttttcgaccagtttttacctgtaattaaacc 8459119  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    | | |||||||||||||||  |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8459120 atagcatttccaaaggcaa--tataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 8459217  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||   |||||||| |||||||    
T  8459218 accgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttaaaaagtgtccataattaaacaactcattaca 8459299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 36 - 343
Target Start/End: Original strand, 19495103 - 19495410
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||||||| |||||| |||||||||||| ||| || ||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||    
T  19495103 ttaactgccgag-aaaaactattatgcagacagtgggttctgcataattgttaagcatttccaagctatttttcggccagtttttacctgtaattaaacc 19495201  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||||||||| ||  ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19495202 agagcatttccaaaggtaa--tataattcatacaacatttaaactcagtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 19495299  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaa---acgttacaaagtgtccatgcataaacaacacattacaattcattacacatca 332  Q
    |||||||||||||||||| ||||||||||||||||||||||||||     |||||| |||||||||   ||||||||||||||||| |||||||||||||    
T  19495300 accgacatttggttcaaaatacacaaaagtttgaaattcatcaaacgcgtgttacatagtgtccataattaaacaacacattacaagtcattacacatca 19495399  T
Q  333 ttaaattaaat 343  Q
    |||||||||||    
T  19495400 ttaaattaaat 19495410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 4518425 - 4518166
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||| ||||| | | || |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  4518425 ttaactgccgaggaaaa-caattatggagacagtaggttctgcataattctaaagcattttcaagccatttttcggccagtttttacctgtaattaaacc 4518327  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    | | |||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4518326 aaagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 4518229  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4518228 accgacatttggttcaaattacacaaaagtttgaaattcatcagaacgttacaaaatgtccat 4518166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 51666675 - 51666397
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||| |||||||| |||||||||| ||| ||| || |||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  51666675 ttaactgctgaggaaaa-caattatgcacacagtgggttctgcataattctaaagcattctcaagccatttttcggccaatttttacctgtaattaaacc 51666577  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    | | |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  51666576 aaagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatattttacaattgtccataattaaatcaa 51666479  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||   |||||||| |||||||    
T  51666478 accgacatttggttcaaattacataaaagtttgaaattcatcaaaaagttacaaagtgtccataattaaacaactcattaca 51666397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 9710606 - 9710919
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||||||||||||||  | || | |||||||||||||||||  ||||||||||||| ||| || |||||||||||||| ||||||||||    
T  9710606 cggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaacgaattatgcagacagtgggttctgcataattctaaa-catttccaag 9710704  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||| |||||||||||||||||||||| |||  ||||||||||| ||||||  | |||||||||||| ||||| || |||||| |||| ||||    
T  9710705 ccatttttcggtcagtttttacctgtaattaaacaagagtatttccaaaggtaaaata--attcatacaacattgaaactaggacataaacaagataaat 9710802  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||      
T  9710803 acaatatcttttacaattgtccataattaaatcaaactgacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataa 9710902  T
Q  301 ataaacaacacattaca 317  Q
     |||||||| |||||||    
T  9710903 ttaaacaactcattaca 9710919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 3 - 343
Target Start/End: Complemental strand, 13178175 - 13177841
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcc 102  Q
    ||||||||||||||| |||||||| || |  | |||||||||||| ||||||| ||||||| ||| ||| || ||||||||| ||||||| |||||||||    
T  13178175 gctgcagttaactgctgaggaaaacctcgagagttaactgccgag-aaaaacatttatgca-acagtgggttctgcataattataaagcacttccaagcc 13178078  T
Q  103 acttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatac 202  Q
    | |||| | ||||||||||||||||||| ||||||| |||||||||||||||  ||||| | |||  |  || |||||| |||||||| ||| ||||||     
T  13178077 attttttgaccagtttttacctgtaatttaaccagagcatttccaaaggcaa--tataacttatatta--tttaaactcagtcataaacaagtaaaatat 13177982  T
Q  203 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |    
T  13177981 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacatagtgtccatagtt 13177882  T
Q  303 aaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  13177881 aaacaacacattacaactcattacacattattaaattaaat 13177841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 56 - 343
Target Start/End: Original strand, 7966065 - 7966347
Alignment:
Q  56 attatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaa 155  Q
    |||||||||||| ||  || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||     
T  7966065 attatgcagacagtgagttctgcataattctaaagcacttccaagccatttttcggccagtttttacctgtaatttaaccagagcatttccaaaggcaa- 7966163  T
Q  156 atataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatctttt-acaattgtccataattaaatcaaaccgacatttggttcaaat 254  Q
     ||||| | |||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  7966164 -tataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatctttttacaattgtccataattaaatcaaaccgacatttggttcaaaa 7966262  T
Q  255 tacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||     |||||||||||||||||||||    
T  7966263 tacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattaca----tttacacatcattaaattaaat 7966347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 46886432 - 46886138
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||| |||||| |||||||||||| || |||| |||||||||||||||||   |||||||||||| ||| || |||||||||||||| ||||||||||    
T  46886432 cggctgtagttaagtgccgaggaaaa-ctcggtagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaag 46886335  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||| ||||||||||||||||||||||||| | |||||||||||||||||  | |||||||||||| |||||||| |||||| |||| |||    
T  46886334 ccattttttcggctagtttttacctgtaattaaaccagagcctttccaaaggcaaaata--attcatacaacattgaaactcggacataaacaagataaa 46886237  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||||    
T  46886236 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcgaaacattacaaagtgtccat 46886138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 36072397 - 36072730
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaaca-attatgcagacaatggattatgcataattctaaagcatttccaa 99  Q
    |||||||||||||||||||||||||| || |||| |||||||||||  ||||||  |||||||||||| |||||| |||||||||||||||||||| |||    
T  36072397 cggctgcagttaactgccgaggaaaacctcggtagttaactgccga--aaaaactgattatgcagacagtggattctgcataattctaaagcattttcaa 36072494  T
Q  100 gccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
      || ||||||     ||||||||||||      |||||||||||||||||||||  ||||| | |||||||| | |||||| |||||||| ||| ||||    
T  36072495 atcatttttcgaaatttttttacctgta------ccagaacatttccaaaggcaa--tataacttatacaacagttaaactcagtcataaacaagtaaaa 36072586  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatg 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||    
T  36072587 tacaatatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacattagatagtgtccatg 36072686  T
Q  300 cataaacaacacattacaattcattacacatcattaaattaaat 343  Q
      ||||||||| ||||||| ||||||||||||||||||||||||    
T  36072687 attaaacaacatattacaactcattacacatcattaaattaaat 36072730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 25040121 - 25039812
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||| ||||||| || ||||||||| ||||||| |||||||  |||||||| || ||||||||||| ||| || ||||||||| | ||||||||||       
T  25040121 cggcttcagttaattgtcgaggaaaaccttggtagttaactgttgaggaaaa-catttatgcagacagtgggttctgcataattgttaagcatttcc--- 25040026  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
     || |||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||| |  ||||||||| |||||| |||||||| ||| |||||    
T  25040025 -catttttcggccagtttttacctgtaatttaaccagaacatttccaaagacaa--tataacttgtacaacatttaaactcagtcataaacaagtaaaat 25039929  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  25039928 acaatatcttttacaattgtccataattaaatcaaactgatatttggttcaaaatacacaaaagtttaaaattcatcaaatcgttacatagtgtccatgc 25039829  T
Q  301 ataaacaacacattaca 317  Q
    |||||||||||||||||    
T  25039828 ataaacaacacattaca 25039812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 44470056 - 44469742
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || || | |||||||||||||||||   |||||||||||| |||||| |||||||||||||| ||||||||||    
T  44470056 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtggattctgcataattctaaa-catttccaag 44469958  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| ||| |||||||||||||||||| ||||||| ||||| |||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  44469957 ccattttttcggtcagtttttacctgtaattgaaccagagcattttcaaaggcaaaata--attcatacaagattgaaactcggacataatcaagataag 44469860  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatg 299  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||     
T  44469859 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccata 44469760  T
Q  300 cataaacaacacattaca 317  Q
      |||||||| |||||||    
T  44469759 attaaacaactcattaca 44469742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 76 - 298
Target Start/End: Complemental strand, 46979228 - 46979008
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    |||||||||||||| ||||| ||||| | ||||||| |||||||||| |||||||||| |||| |||||||||||||||  ||||||||||||||||||     
T  46979228 tgcataattctaaaacattttcaagctatttttcggtcagtttttacttgtaattaaatcagagcatttccaaaggcaa--tataaatcatacaacattg 46979131  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  46979130 aaactcggtcataaacaagaaaaatagaatatcttttacaattgtccataattaaatcaaacagacatttgattcaaattacacaaaagtttgaaattca 46979031  T
Q  276 tcaaaacgttacaaagtgtccat 298  Q
    ||||||| |||||||||||||||    
T  46979030 tcaaaacattacaaagtgtccat 46979008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 50113335 - 50113630
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||| |||||| |||||||||||| || |||| |||||||||||| ||||   |||||||||||| ||| || |||||||||||||| ||||| |||     
T  50113335 cggctgtagttaattgccgaggaaaatctcggtagttaactgccgagaaaaactgattatgcagacagtgggttctgcataattctaaa-cattttcaat 50113433  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||| |||||||| |||||||||||||||| |||||||||||||||||||  | ||||||||| || |||||| | |||||| |||| |||    
T  50113434 ccattttttcggctagtttttaactgtaattaaaccagagcatttccaaaggcaaaata--attcatacaacgttgaaactcagacataaacaagataaa 50113531  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  50113532 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat 50113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 36 - 279
Target Start/End: Complemental strand, 22346053 - 22345818
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| ||    
T  22346053 ttaactgccgaggaaaa-caattatgcagacagtgggttctgcataattctaatgcatttccaagccatttttcgaccagtttttacctgtaattaagcc 22345955  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||||||||||  |||||||||||||||||||| ||||||||     |  ||||||||||||||||||||||||||||||||||| ||||||||    
T  22345954 agagcatttccaaaggc--aatataaatcatacaacattgaaactcgg-----accaagaaaaatacaatatcttttacaattgtccataagtaaatcaa 22345862  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaa 279  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  22345861 accgacatttggttcaaattacacaaacgtttgaaattcatcaa 22345818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 15051393 - 15051098
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||  ||||    |||||||||||| ||  || |||||||||||||| ||||||||||    
T  15051393 cggcggcagttaactgccgaggaaaacctcggtagttaactgccggcgaaatctgattatgcagacagtgagttctgcataattctaaa-catttccaag 15051295  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||     
T  15051294 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataag 15051197  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  15051196 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 15051098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 52805569 - 52805325
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||| ||||||||||||  ||||||||||||| |||  | ||||| |||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  52805569 ttaattgccgaggaaaacaaattatgcagacagtgggctctgcatgattctaaa-catttccaagccatttttcggtcagcttttacctgtaattaaacc 52805471  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    |||  ||||||||||||||||||  | ||||| |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  52805470 agagtatttccaaaggcaaaata--attcatataacattgaaactctgacataaataagaaaaatacaatatcttttacaattgtccataattaaattaa 52805373  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  52805372 accgacatttggttcaaattacacaaacgtttgaaattcatcataacg 52805325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 20353980 - 20353685
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| |||||||||||||||||||||  | |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  20353980 cggcggcagttaactgccgaggaaaacttcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 20353882  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||||| ||| |||||||| |||||  |||| |||    
T  20353881 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatacaagattgaaactcggacataatgaagacaaa 20353784  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  20353783 tacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 20353685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 29352296 - 29352556
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| |||||| | |||||||||||| ||||||||| ||| |||| |||||| ||||||| |||||||||||    
T  29352296 ttaactgccgaggaaaactgattatgcagacagtggattctacataattctaaa-catttccaaaccattttttcggccaatttttacttgtaattaaac 29352394  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||||| |||||||||||||  | |||||||| ||| |||||||| |||||  |||| ||||||||||||||||||||||||  |||||||||| |    
T  29352395 cagagcatttgcaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaatta 29352492  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  29352493 aaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 29352556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 30910039 - 30909779
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   ||||||||||||  || || ||||||||||| || || |||||||||| |||| ||||||||||||||||||||||||||    
T  30910039 ttaactgccgaggaaaactgattatgcagacagagggttctgcataattctgaa-caattccaagccattttttcggccagtttttacctgtaattaaac 30909941  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  || | || ||||||||||||||||||||| ||||||||||| |    
T  30909940 cagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaacataagtacaatatcttttacaattgttcataattaaatta 30909843  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  30909842 aaccgacgtttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 30909779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 283
Target Start/End: Original strand, 94500 - 94705
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| |||||||||| |  |||| | |||||||||||||||||||||| |||| |||||| |||||||||| |  | ||||||||||||     
T  94500 tgcatcattctaaaacatttccaaggctttttttgaccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaaca--attcatacaacattg 94597  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  94598 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattca 94697  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  94698 tcataacg 94705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 22527665 - 22527460
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||| ||| ||||||||||||  |||||||| ||||||||||||||||||||||||| |||||| |||||||||| |  | ||||||||||||     
T  22527665 tgcatcattccaaaacatttccaagccttttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattg 22527568  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  22527567 aaactcggacataaacaagataaatacaatatgttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattca 22527468  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  22527467 tcataacg 22527460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 38771657 - 38771954
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  38771657 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 38771755  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  38771756 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 38771853  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  38771854 aatacaatatcctttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 38771953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 56 - 298
Target Start/End: Complemental strand, 13633863 - 13633622
Alignment:
Q  56 attatgcagacaatggattatgcataattctaaagcatttccaagccacttttc-ggccagtttttacctgtaattaaaccagaacatttccaaaggcaa 154  Q
    |||||||||||| ||| || |||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||| |    
T  13633863 attatgcagacagtgggttctgcataattctaga-catttccaagccatttttccggccagtttttacctgtaattaaaccagacaatttccaaaggcta 13633765  T
Q  155 aatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgaca-tttggttcaaa 253  Q
    ||||  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||  |||||||| ||||||| | |    
T  13633764 aata--attcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatttaaccgacattttggttaaca 13633667  T
Q  254 ttacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||| ||||| ||||||||||||||||||| |||||||||||||||    
T  13633666 ttaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 13633622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 21144641 - 21144396
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||| ||||||||||||  ||||||| ||||| ||   | || || |||||||| ||||||||||||| ||||||||||||||||| |||||| |||| |    
T  21144641 ttaagtgccgaggaaaacaaattatgaagacagtgagctctgtatgattctaaaacatttccaagccatttttcggccagtttttatctgtaagtaaagc 21144542  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    |||  ||||| ||||||||||||  | |||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  21144541 agagaatttcgaaaggcaaaata--attcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtctataattaaatcaa 21144444  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    | ||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  21144443 atcgacatttggttcaaattacacaaacgtttgaaattcgtcataacg 21144396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 3944002 - 3944298
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  3944002 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 3944100  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  3944101 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 3944197  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  3944198 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 3944297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 3993888 - 3993592
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  3993888 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 3993790  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  3993789 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 3993693  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  3993692 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 3993593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 8 - 283
Target Start/End: Complemental strand, 471108 - 470835
Alignment:
Q  8 agttaactgccgaggaaaaactt-ggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactt 106  Q
    |||||||||||||| |||||||| ||||  |||||||||||||||    ||||||||| || ||   | ||||| |||||||| |||||||| | |  ||    
T  471108 agttaactgccgag-aaaaacttcggtatgtaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaggtctttt 471010  T
Q  107 ttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaata 206  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| |  | |||||||||||| |||||||| |||||| |||| || |||||||    
T  471009 ttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaacattgaaactcggacataaacaagataagtacaata 470912  T
Q  207 tcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  470911 tcttttaccattgttcataatttaatcaaaccgacatttggttcaaattatacaaacgtttgaaattcatcataacg 470835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 83 - 283
Target Start/End: Original strand, 16281807 - 16282004
Alignment:
Q  83 ttctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcg 182  Q
    ||||||| ||||||||| | | ||||||| |||||||||| |||||||||| |||| |||||| ||||||||||||  | ||||||||||||||||||||    
T  16281807 ttctaaaacatttccaaactatttttcggtcagtttttac-tgtaattaaagcagagcatttcgaaaggcaaaata--attcatacaacattaaaactcg 16281903  T
Q  183 gtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    | |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  16281904 gacataaacaagaaaaatacaatattttttacaattgtccataattaaattaaaccgacatctggttcaaattacacaaacgtttgaaattcatcataac 16282003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 283
Target Start/End: Original strand, 31780070 - 31780275
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| ||||||||  ||||||||||   |||||||||| ||||||||||||||||| ||||| |||||| || ||||||| |  | ||||||||||||     
T  31780070 tgcatcattctaaaatatttccaagcattttttcggccaatttttacctgtaattaagccagagcatttcgaatggcaaaaca--attcatacaacattg 31780167  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31780168 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattca 31780267  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  31780268 tcataacg 31780275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 38690117 - 38690251
Alignment:
Q  183 gtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38690117 gtcataaataagaaaaatacaatatcttttacaattgtccatagttaaatcaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaac 38690216  T
Q  283 gttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||   ||||||||||||||||    
T  38690217 gttacaaagtgtccataattaaacaacacattaca 38690251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 123 - 317
Target Start/End: Complemental strand, 37019319 - 37019127
Alignment:
Q  123 ctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtcc 222  Q
    ||||||||||||||||  |||| |||||| ||||||  | |||||||||||| ||||||||  ||||| |||| ||||||||||||||||||||||||||    
T  37019319 ctgtaattaaaccagagtattttcaaaggtaaaata--attcatacaacattgaaactcggatataaacaagataaatacaatatcttttacaattgtcc 37019222  T
Q  223 ataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||   |||||||| |||||||    
T  37019221 ataattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaaacaactcattaca 37019127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 19521714 - 19521900
Alignment:
Q  91 catttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaa 190  Q
    ||||||||||||| |||| || || |||||||||| ||||||| |||| |||||| ||||||||||||  | ||||||| |||| |||||||| ||||||    
T  19521714 catttccaagccattttttggtcactttttacctgcaattaaagcagagcatttcgaaaggcaaaata--attcatacagcattgaaactcggacataaa 19521811  T
Q  191 taagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaa 279  Q
     ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19521812 caagaaaaatactatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatcaa 19521900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 343
Target Start/End: Original strand, 33168083 - 33168271
Alignment:
Q  155 aatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaat 254  Q
    ||||||| |||||||||||    |||| |||||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||     
T  33168083 aatataattcatacaacatctgtactcagtcataaacaaggaaaatatattatcttttacagttgtccataattaaatcaaaccgacatttagttcaaag 33168182  T
Q  255 tacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||   ||||||||||||||||| |||||||| |||||||||||||||    
T  33168183 tacacgaaagtttgaaaatcatcaaaacgttacatagtgtccataattaaacaacacattacaactcattacatatcattaaattaaat 33168271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 91 - 275
Target Start/End: Original strand, 50617320 - 50617503
Alignment:
Q  91 catttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaa 190  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| || |||||||  ||||||||||||  | |||||||||||| |||||| | ||||||    
T  50617320 cattttcaagccatttttcggccagtttttacctgtaattaaagcacaacattttgaaaggcaaaata--attcatacaacattgaaactctgacataaa 50617417  T
Q  191 taagaaaaat-acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
     || |||||  ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  50617418 caaaaaaaaacacaatattttttacaattgtccatatttaaattaaaccgacatttggttcaaattacacaaacgtttgaaattca 50617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 99 - 315
Target Start/End: Complemental strand, 5141816 - 5141603
Alignment:
Q  99 agccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaa 198  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||| | |||| | |||||| |||||||    
T  5141816 agccatttttcggtcagtttttacctgtaattaaagcagaacatttccaaaggcaa--tataactcatacaacatttatactcaggcataaacaagaaaa 5141719  T
Q  199 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     |||| ||||||||||| ||||||||||||||||||||||||||   ||||| |||||| | || ||||||||||||| ||||||||| | |||||| ||    
T  5141718 ttaca-tatcttttacagttgtccataattaaatcaaaccgacaaggggttcgaattactcgaatgtttgaaattcattaaaacgttaaatagtgtcaat 5141620  T
Q  299 gcataaacaacacatta 315  Q
       ||||||||||||||    
T  5141619 aattaaacaacacatta 5141603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38689959 - 38690111
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||||| |||||||||||||| ||| || | |||||||||||||||||||||||    
T  38689959 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggaaaa-caattatgcagacagtggtttctacataattctaaagcatttccaag 38690057  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaa 154  Q
    ||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  38690058 ccatttttcggccagtttttatctgtaattaaaccagaggatttccaaaggcaa 38690111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 298
Target Start/End: Complemental strand, 5082283 - 5082114
Alignment:
Q  129 ttaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcg--gtcataaataagaaaaatacaatatcttttacaattgtccataa 226  Q
    |||||||||| ||||| |||||||||||||  | |||||||| ||| ||||||   | |||||  |||| || ||||||||||||||||||||| |||||    
T  5082283 ttaaaccagagcattttcaaaggcaaaata--attcatacaagattgaaactctcagacataataaagataagtacaatatcttttacaattgttcataa 5082186  T
Q  227 ttaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  5082185 ttaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 5082114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 280
Target Start/End: Original strand, 6558047 - 6558192
Alignment:
Q  133 accagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaat 232  Q
    |||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||||||||||||||||||| |||||||||||    
T  6558047 accagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaat 6558144  T
Q  233 caaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
     |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  6558145 taaaccgacatttggttaaaattaaacaaatgtttgaaattcatcaaa 6558192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 267
Target Start/End: Original strand, 12643369 - 12643500
Alignment:
Q  134 ccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatc 233  Q
    ||||| |||||||||||||||||||  | |||||||| ||| |||||| | |||||| |||| ||||||||||||||||||||||||||||||||||||     
T  12643369 ccagagcatttccaaaggcaaaata--attcatacaagattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatt 12643466  T
Q  234 aaaccgacatttggttcaaattacacaaaagttt 267  Q
    |||||||||||||||| |||||| ||||| ||||    
T  12643467 aaaccgacatttggttaaaattaaacaaacgttt 12643500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 23359394 - 23359237
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||| |||||||||| || |||| | |||||||||||||||   ||||| ||||||     || |||||||||||||| ||||||||||    
T  23359394 cggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatacagacagcaagttctgcataattctaaa-catttccaag 23359296  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaata 158  Q
    ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23359295 ccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata 23359237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 47715037 - 47714877
Alignment:
Q  96 ccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataaga 195  Q
    |||||||| |||||||| ||||||||||| ||||| ||||||| |||||||| |  |||  ||| | || ||||||||| | |||| |||||||| || |    
T  47715037 ccaagccatttttcggctagtttttacctataattcaaccagagcatttccagaaacaa--tattagtcgtacaacatttatactcagtcataaacaaca 47714940  T
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattaca 258  Q
    |||||||| ||||||||| |  ||||||||||| |||||| |||||||||  || ||||||||    
T  47714939 aaaatacattatcttttatagctgtccataattgaatcaatccgacatttcattaaaattaca 47714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6557943 - 6558043
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| |||||||||||| ||||   ||||||||||||||||  | |||||||||||||| ||||| ||||    
T  6557943 cggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaaaaactgattatgcagacaatgg-gtctgcataattctaaa-cattttcaag 6558040  T
Q  101 cca 103  Q
    |||    
T  6558041 cca 6558043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 46978990 - 46978949
Alignment:
Q  302 taaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  46978990 taaacaacacattacaattcattacacatcattatattaaat 46978949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13636167 - 13636119
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  13636167 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 13636119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 1179878 - 1179981
Alignment:
Q  240 acatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaatt 339  Q
    |||||| ||| ||||||||| || ||||||||||||||||||| ||| | ||||||||    |||||||||||||||||  ||||| | ||  |||||||    
T  1179878 acatttcgttaaaattacacgaatgtttgaaattcatcaaaacattaaagagtgtccacaattaaacaacacattacaacacattaaatattgttaaatt 1179977  T
Q  340 aaat 343  Q
    ||||    
T  1179978 aaat 1179981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19161920 - 19161971
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || || | |||||||||||||||||    
T  19161920 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaa 19161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44336277 - 44336328
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || |||| |||||||||||| ||||    
T  44336277 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagaaaaa 44336328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3728763 - 3728813
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  3728763 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 3728813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6562206 - 6562156
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  6562206 cggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaaa 6562156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8548714 - 8548664
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  8548714 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 8548664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48751455 - 48751405
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||| |||||||||||| || |||| ||||||||||||||||    
T  48751455 cggctgcagttaattgccgaggaaaacctcggtagttaactgccgaggaaa 48751405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29438065 - 29438020
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||    
T  29438065 cggctgcagttaactaccgaggaaaacctcggtaattaactgccga 29438020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52802158 - 52802203
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  52802158 cggctgcagttaactgccgaggaaaacctcggtagttaactgccga 52802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19159651 - 19159699
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||    
T  19159651 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 19159699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11183214 - 11183261
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||||||||||||||||||||||| || |||| ||||||| |||||    
T  11183214 cggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagg 11183261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15047310 - 15047361
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||||   || |||| |||||||||||||||||    
T  15047310 cggctgcagttaactgccgaggaattcctcggtagttaactgccgaggaaaa 15047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19521637 - 19521700
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcag 64  Q
    |||||||||||| ||||| |||| || || |||| |||||||||||||||||  ||||||||||    
T  19521637 cggctgcagttacctgccaaggataatctcggtagttaactgccgaggaaaacaaattatgcag 19521700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44598951 - 44598900
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||||||  | || | |||||||||||||||||    
T  44598951 cggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaa 44598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2425730 - 2425680
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||| ||||| || || |||| ||||||||||||||||    
T  2425730 cggctgcagttaactgctgaggagaatctcggtagttaactgccgaggaaa 2425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8460142 - 8460096
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||    
T  8460142 cggctgcagttaactgccaaggaaaatctcggtagttaactgccgag 8460096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13173863 - 13173909
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||| ||||||||||| ||||| | ||||||||||||    
T  13173863 cggctgcagttaacagccgaggaaaaccttggcagttaactgccgag 13173909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19054295 - 19054249
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||    
T  19054295 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgag 19054249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26770598 - 26770548
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  |||| | ||||||||||||||||    
T  26770598 cggctgcagttaactaccgaggaaaattttggcagttaactgccgaggaaa 26770548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26879340 - 26879290
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||| ||||||    
T  26879340 cggcggcagttaactgccgaggaaaacctcggtagttaactgccaaggaaa 26879290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29261442 - 29261535
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcattt 95  Q
    |||||||| ||||||||||| ||||| ||  ||| ||||||| |||| ||||  ||||||| |||||  || || ||||||||||||||||||||    
T  29261442 cggctgcaattaactgccgaagaaaacctcagtagttaactgtcgag-aaaactaattatggagacagcgggttctgcataattctaaagcattt 29261535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29424408 - 29424458
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  29424408 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 29424458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29622469 - 29622419
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||||    
T  29622469 cggcggcagttaattgccgaggaaaacctcggtagttaactgccgaggaaa 29622419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46217363 - 46217313
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  46217363 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 46217313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 3941194 - 3941145
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  3941194 ggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 3941145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 4518148 - 4518115
Alignment:
Q  302 taaacaacacattacaattcattacacatcatta 335  Q
    ||||||||||||||||| ||||||||||||||||    
T  4518148 taaacaacacattacaactcattacacatcatta 4518115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 26633559 - 26633600
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||| || |||| |||||||||||    
T  26633559 tgcagttaactgccgaggaaaacctcggtagttaactgccga 26633600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 29261544 - 29261601
Alignment:
Q  155 aatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatctttt 212  Q
    ||||||| | |||||||||| ||| || |||||||| ||| |||||||||||||||||    
T  29261544 aatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatctttt 29261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46141810 - 46141855
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||||||||||||||  | |||| |||||||||||    
T  46141810 cggctgcagttaactgccgaggaaaacatcggtagttaactgccga 46141855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 50117886 - 50117841
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||| || |||| |||| |||||||||||    
T  50117886 gcagttaactgccgaggaaaatctcggtagttaaatgccgaggaaa 50117841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 9711691 - 9711647
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||||||||| || || | |||||||||||||||    
T  9711691 gcagttaactgccgaggaaaacctcgggagttaactgccgaggaa 9711647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 13633904 - 13633948
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||| || |||| ||||||||||| |||||    
T  13633904 agttaactgccgaggaaaacctcggtagttaactgccgaagaaaa 13633948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 34 - 296
Target Start/End: Complemental strand, 43377304 - 43377045
Alignment:
Q  34 aattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaa 133  Q
    ||||||||||||||||||| |||||||||||||| ||| || | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43377304 aattaactgccgaggaaaa-caattatgcagacagtgggttctacataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaa 43377206  T
Q  134 ccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatc 233  Q
    ||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  43377205 ccagagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatg 43377108  T
Q  234 aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcc 296  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  43377107 aaaccgaaatttggttcaagttacacaaacgtttgaaattcatcaaaacgttacaaagtgtcc 43377045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 43679425 - 43679738
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||| ||   ||||||| || |||| ||||||||||| |||||  |||||| |||||| ||| || ||||||||||||||||||||||||     
T  43679425 cggctgcagttaattgttaaggaaaacctcggtagttaactgccgaagaaaat-aattatacagacagtgggttttgcataattctaaagcatttccaaa 43679523  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
     || |||| ||| | ||||||| ||||||||||||| || ||||||||||||||  |||||||||||||| ||| ||||||||||||||| |||||||||    
T  43679524 tcattttttggctaatttttacatgtaattaaaccaaaatatttccaaaggcaa--tataaatcatacaaaattgaaactcggtcataaacaagaaaaat 43679621  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||      
T  43679622 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttaaaattcatcaaaacgttacaaagtgttcataa 43679721  T
Q  301 ataaacaacacattaca 317  Q
     |||||||| |||||||    
T  43679722 ttaaacaactcattaca 43679738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 50 - 343
Target Start/End: Complemental strand, 4867799 - 4867508
Alignment:
Q  50 aaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaa 149  Q
    ||||||| |||||||||| ||| || |||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||| ||||||||||    
T  4867799 aaaacaactatgcagacagtgggttttgcataattctaaagcatttccaagccattttttggccagtttttacttgtaattaaactagagcatttccaaa 4867700  T
Q  150 ggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggtt 249  Q
    |||||  ||||| |||||||||||| |||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||    
T  4867699 ggcaa--tataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatctttcaccattgtccataattaaatcaaaccaacatttgatt 4867602  T
Q  250 caaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
     ||| |||||||||||||||||||||||||||| ||||| ||| |||||   ||||||||| ||||||| |||||||  |||||||||||||||    
T  4867601 taaaatacacaaaagtttgaaattcatcaaaacattacatagtctccataattaaacaacagattacaactcattacttatcattaaattaaat 4867508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 50 - 298
Target Start/End: Original strand, 2124254 - 2124503
Alignment:
Q  50 aaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaat---taaaccagaacatttcc 146  Q
    |||||||||||||||||| ||| || ||||||||||||| |||||||||||||| |||||||||| |||||||||| |||   ||||||||| |||||||    
T  2124254 aaaacaattatgcagacagtgggttctgcataattctaatgcatttccaagccatttttcggccactttttacctggaatatttaaaccagagcatttcc 2124353  T
Q  147 aaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttg 246  Q
    ||||||||  |||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  2124354 aaaggcaa--tataaatcatacaacattgaaactcggtcataaccaagaaaaatataatatcttttacagttgtccatagttaaatcaaaccgacatttg 2124451  T
Q  247 gttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2124452 gttcaaattacacaaacatttgaaattcatcaaaacgttacaaagtgtccat 2124503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 50 - 317
Target Start/End: Original strand, 39751137 - 39751402
Alignment:
Q  50 aaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaa 149  Q
    |||||| ||||||||||| |||||| |||||| || ||| |||||||||||| | |||| |||||||||||| || ||||||||||||| ||||||||||    
T  39751137 aaaacagttatgcagacagtggattctgcatatttataatgcatttccaagctattttttggccagtttttaactataattaaaccagagcatttccaaa 39751236  T
Q  150 ggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggtt 249  Q
    | |||  |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  39751237 gacaa--tataaatcatacaacattgaaactcggtcataaccaagaaaaatacaatatcttttacagttgtccgtaattaaatcaaactgacatttggtt 39751334  T
Q  250 caaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  39751335 caaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 39751402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 39 - 317
Target Start/End: Original strand, 23924032 - 23924307
Alignment:
Q  39 actgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccaga 138  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||| |||    
T  23924032 actgccgaggaaaactgattatgcagacaatggattatgcataattctaaa-cattttcaagccatttttcggtcagtttttacctgtaattaaactaga 23924130  T
Q  139 acatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaacc 238  Q
     |||||||||||||||||||  | |||||||| ||| |||||||| |||||| |||| || ||||||||||||||||||||| ||||||||||| |||||    
T  23924131 gcatttccaaaggcaaaata--attcatacaagattgaaactcggacataaaaaagataagtacaatatcttttacaattgttcataattaaattaaacc 23924228  T
Q  239 gacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  23924229 gacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 23924307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 23578472 - 23578705
Alignment:
Q  10 ttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttc 109  Q
    ||||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||| ||| || |||||||||||||||||||||||| ||| |||||    
T  23578472 ttaactgccgaggaaaaccttggcagttaactaccgaggaaaaa-aattatgcagacagtgggttctgcataattctaaagcatttccaaaccatttttc 23578570  T
Q  110 ggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatct 209  Q
     |||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||    
T  23578571 agccagtttttacctgtaattaaaccagagcatttccaaaggc--aatataaattatacaacattgaaactctgtcataaacaagaaaaatacaatatct 23578668  T
Q  210 tttacaattgtccataattaaatcaaaccgacatttg 246  Q
    ||||||||||| |||||||||||||||||||||||||    
T  23578669 tttacaattgttcataattaaatcaaaccgacatttg 23578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 35962335 - 35962626
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||| |||||||||||||||||||| || || | |||||||||||||||||   ||||||||| || ||| || |||||||||||||| ||||| ||||    
T  35962335 cggctacagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcaggcagtgggttctgcataattctaaa-cattttcaag 35962433  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||| ||||||| |||||||| ||||||  ||| | ||||||||||||  | |||||||||||||||||||||  ||||| |||| |||    
T  35962434 ccattttttcggccaatttttacgtgtaattataccagagtattacaaaaggcaaaata--attcatacaacattaaaactcggatataaacaagataaa 35962531  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35962532 tacaatatcttttacaattgtccataattaaattaaaccgaaatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgt 35962626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 34366939 - 34367214
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||| ||||    ||||||||| || ||   | ||||| |||||||| ||||||||||    
T  34366939 cggctgcagttaacttccgaggaaaacctcggtagttaactgccgatgaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaag 34367038  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||  |||||||||||||||||||||||||||||||||| |||||| |||||||||| |  | ||||||| |||| |||||||| |||||| |||| ||||    
T  34367039 ccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacagcattgaaactcggacataaacaagataaat 34367136  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatca 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  34367137 acaatatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatca 34367214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 39520 - 39799
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||  || |||||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||    
T  39520 ttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttccaagccattttttcggccaatttttacctgtaattaaac 39618  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | |||||||| ||| || ||| | |||||| |||| |||||||||||||||||||||||||||||||||||| |    
T  39619 cagagcatttccaaaggcaaaata--attcatacaagattgaacctcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 39716  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||| |||||| |||||  |||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  39717 aaccgacatttggttaaaattaaacaaacatttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattaca 39799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 76 - 317
Target Start/End: Complemental strand, 20549228 - 20548990
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    |||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||| |||||||  | |||||||| |||     
T  20549228 tgcataattctaaa-catttccaagccatcattcggccagtttttacctgtaattaaaccagagcatttccaaagacaaaata--attcatacaagattg 20549132  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    ||||||||  ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||| ||||| ||||||||||||    
T  20549131 aaactcggatataaacaagataaatacaatatcttttacaattgttcataattaaattaaaccgaaatttggttaaaattaaacaaacgtttgaaattca 20549032  T
Q  276 tcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||| |||||||||||||||   |||||||| |||||||    
T  20549031 tcaaaacattacaaagtgtccataattaaacaactcattaca 20548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 7344602 - 7344306
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  7344602 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 7344504  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaa 198  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| ||    
T  7344503 ccatttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagataa 7344406  T
Q  199 atacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| | | | ||||||||||||||||||| |||||||||||||||    
T  7344405 atacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccat 7344306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 298
Target Start/End: Complemental strand, 31960090 - 31959811
Alignment:
Q  17 ccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccag 115  Q
    |||||||||| || |||| | ||||| |||||||||   ||||||||||||     || |||||||||||||| ||||| ||||||| |||| |||||||    
T  31960090 ccgaggaaaacctcggtagtaaactgtcgaggaaaactgattatgcagacagcaagttctgcataattctaaa-catttgcaagccattttttcggccag 31959992  T
Q  116 tttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttaca 215  Q
    ||||||||||||||||||||||| |||||||||||||||||||  | ||||| || ||| |||||||| |||||| |||| |||||||||||||||||||    
T  31959991 tttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatataagattgaaactcggacataaacaagataaatacaatatcttttaca 31959894  T
Q  216 attgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||| ||| ||||||| ||||| |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  31959893 attgttcatgattaaattaaacccacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 31959811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 36 - 273
Target Start/End: Original strand, 41743927 - 41744162
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    ||||||||||| |||||  ||||||||||||| ||| || ||||||||| |||| ||||||||||||| |||| |||||||||||||| |||||||||||    
T  41743927 ttaactgccgaagaaaactaattatgcagacagtgggttctgcataattttaaa-catttccaagccattttttcggccagtttttacatgtaattaaac 41744025  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| |||||||||||||||||||  | | |||||| ||| |||||||  |||||| |||| ||||||||||| |||||||||||||||| ||||||| |    
T  41744026 cagagcatttccaaaggcaaaata--atttatacaagattgaaactcgaacataaacaagataaatacaatattttttacaattgtccatgattaaatta 41744123  T
Q  235 aaccgacatttggttcaaattacacaaaagtttgaaatt 273  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  41744124 aaccgacatttggttcaaattacacaaacgtttgaaatt 41744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 8419432 - 8419728
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||||   || ||||||||||||| | |||||||||    
T  8419432 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacaataagttctgcataattctaa-gtatttccaag 8419530  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| ||||||||||||| |||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||| |||||  |||| |    
T  8419531 ccattttttcggccagtttttatctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcggacataatgaagata 8419627  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  8419628 aatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 8419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 32375679 - 32375975
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||    
T  32375679 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaag 32375777  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaa 197  Q
    ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| ||  ||||| |||||   |  ||| |||||||  |||||  |||| |    
T  32375778 ccattttttcggccagtttttacctgtaattaaaccagagcatt-ccaaaggtaa--tataattcatatgtatgattgaaactcgaacataatgaagata 32375874  T
Q  198 aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtcca 297  Q
    |||||||||||||||||||||||  |||||||||| ||| |||||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  32375875 aatacaatatcttttacaattgttaataattaaattaaatcgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtcca 32375974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 76 - 277
Target Start/End: Original strand, 41238951 - 41239150
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||| ||||||||| ||||| | ||||||| ||||||||||||| |||| |||||| ||| ||||||||  | ||||||||||||     
T  41238951 tgcatgattctaaaacatgtccaagccatttttcagtcagttttaacctgtaattaaagcagagcatttcgaaatgcaaaata--attcatacaacattg 41239048  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    || ||||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  41239049 aatctcggacataaacaagacaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattca 41239148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 196 - 343
Target Start/End: Complemental strand, 7172179 - 7172032
Alignment:
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  7172179 aaaatacaatatcttttacaattgtccataattaaatcaaacccacattttgttcaaaatacacaaaagtttgaaattcatgaaaacgttacatagtgtc 7172080  T
Q  296 catgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    |||   ||||||||||||||||| ||| ||||||||||||||||||||    
T  7172079 cataattaaacaacacattacaactcagtacacatcattaaattaaat 7172032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 298
Target Start/End: Original strand, 30301236 - 30301458
Alignment:
Q  76 tgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatac--aaca 172  Q
    ||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||| |||||   |  |    
T  30301236 tgcataattctaa-gtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataattcatatgtatga 30301332  T
Q  173 ttaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaat 272  Q
    || |||||||| |||||  |||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| | |||||||||    
T  30301333 ttgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaat 30301432  T
Q  273 tcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||| |||||||||||||||    
T  30301433 tcatcaaaacattacaaagtgtccat 30301458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 22588314 - 22588173
Alignment:
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |    
T  22588314 aaactcgatcataaacaagaaaaatacaatatcttttacaattatccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattga 22588215  T
Q  276 tcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||||||||||||||||||   |||||||| |||||||    
T  22588214 tcaaaacgttacaaagtgtccataattaaacaactcattaca 22588173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 96 - 317
Target Start/End: Complemental strand, 22661523 - 22661305
Alignment:
Q  96 ccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataaga 195  Q
    |||||||| |||| ||| ||||||||||||||||| ||| ||| ||||||||||||||   ||| | |  ||||||||| | |||| |||||||| ||||    
T  22661523 ccaagccaatttt-ggcaagtttttacctgtaattcaactagagcatttccaaaggcat--tattagttgtacaacatttatactcagtcataaacaaga 22661427  T
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    |||||||| ||||||||||  |||||||||||||||||||||||| |||| ||| ||||||||| || |||||| |||||||||||| ||| | ||||||    
T  22661426 aaaatacattatcttttacggttgtccataattaaatcaaaccgatatttcgttaaaattacacgaatgtttgagattcatcaaaacattaaagagtgtc 22661327  T
Q  296 catgcataaacaacacattaca 317  Q
    |||   ||||||||||||||||    
T  22661326 cataattaaacaacacattaca 22661305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 327
Target Start/End: Complemental strand, 30972759 - 30972595
Alignment:
Q  163 tcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaa 262  Q
    ||||||| |||| | |||| |||||||| |||||||||||| ||||||||||  ||||| |||||||||||||  | |||||| ||| ||||||||| ||    
T  30972759 tcatacatcatttatactcagtcataaacaagaaaaatacattatcttttacggttgtcgataattaaatcaattcaacatttcgttaaaattacacgaa 30972660  T
Q  263 agtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattaca 327  Q
     ||||||||||||||||||| ||||| ||| | |||   ||||||||||||||||  ||||||||    
T  30972659 tgtttgaaattcatcaaaacattacagagtatacataattaaacaacacattacacatcattaca 30972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 7172625 - 7172469
Alignment:
Q  34 aattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccag--tttttacctgtaatta 131  Q
    |||||||||||||| ||||   |||||||||||| ||| || |||||||||||||||||||||||||||  |||||  || |  ||||||| ||||||||    
T  7172625 aattaactgccgagaaaaactgattatgcagacagtggcttctgcataattctaaagcatttccaagccgtttttcaacctgtttttttacttgtaatta 7172526  T
Q  132 aaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaa 190  Q
    ||||||| ||||| |||||||  ||||||| | |||||||||| |||||  ||||||||    
T  7172525 aaccagagcattttcaaaggc--aatataacttatacaacatttaaacttagtcataaa 7172469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 281
Target Start/End: Original strand, 31280942 - 31281118
Alignment:
Q  105 ttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    |||||||||  ||||||||||||||| ||||||| |||||||| || |||  || || ||||||| |||| | | ||||||||||| ||||| ||||||     
T  31280942 ttttcggcctatttttacctgtaattcaaccagagcatttccagagacaa--tacaactcatacaccatttataatcggtcataaacaagaacaatacat 31281039  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaa--ttacacaaaagtttgaaattcatcaaaa 281  Q
     |||||||||||||| |  |||||||||||| | ||||||| ||| |||  |||||| || ||||||||||||||||||    
T  31281040 aatcttttacaattgactgtaattaaatcaatctgacatttcgttaaaattttacacgaatgtttgaaattcatcaaaa 31281118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 1116224 - 1116105
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||| ||||   ||||||||||||  || || |||||||||||||| || |||||||||| |||| ||||||||||| ||||||||||||||    
T  1116224 ttaactgccgagaaaaactgattatgcagacagagggttctgcataattctaaa-caattccaagccattttttcggccagtttt-acctgtaattaaac 1116127  T
Q  135 cagaacatttccaaaggcaaaa 156  Q
    |||| |||||||||||||||||    
T  1116126 cagagcatttccaaaggcaaaa 1116105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22550910 - 22550859
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  22550910 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 22550859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45066406 - 45066355
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  45066406 cggcggcagttaactgccgaggaaaacctcggtaattaactgccgaggaaaa 45066355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 22588392 - 22588311
Alignment:
Q  53 acaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaac 134  Q
    ||||||||||||||| ||| || || ||||||||||||||||| ||| | | ||||||| ||||||||| ||||||| ||||    
T  22588392 acaattatgcagacagtgggttctgtataattctaaagcattttcaatcaatttttcggtcagtttttatctgtaatgaaac 22588311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 41016445 - 41016493
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  41016445 ctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 41016493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 184597 - 184546
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  184597 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38872975 - 38872932
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgcc 44  Q
    |||||||||||||||||||||||||| || ||||||||||||||    
T  38872975 cggctgcagttaactgccgaggaaaacctcggtaattaactgcc 38872932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26663078 - 26663028
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  26663078 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 26663028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39601732 - 39601782
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||| || || | ||||||||||||||||    
T  39601732 cggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaa 39601782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26451508 - 26451556
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||| ||||||||||||||||||| || |||| ||||||||||||||    
T  26451508 cggctgtagttaactgccgaggaaaacctcggtagttaactgccgagga 26451556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 40077292 - 40077248
Alignment:
Q  4 ctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    ||||||||||||||||||||||| || |||| |||||||||||||    
T  40077292 ctgcagttaactgccgaggaaaacctcggtagttaactgccgagg 40077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 42602492 - 42602536
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||| || |||| ||||||||||||||    
T  42602492 tgcagttaactgccgaggaaaacctcggtagttaactgccgagga 42602536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 43262451 - 43262499
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||||||  | |||| ||||||||||||||||    
T  43262451 gctgcagttaactgccgaggaaaacttcggtagttaactgccgaggaaa 43262499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1114771 - 1114818
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagg 48  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||    
T  1114771 cggctgcagttaactgccgaggaaatcctcggtagttaactgccgagg 1114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15030912 - 15030963
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || || | |||||||||||||||||    
T  15030912 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaa 15030963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17924328 - 17924278
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| |||||||||||||||| |||| || |||| ||||||||||||||||    
T  17924328 cggcggcagttaactgccgagaaaaacctcggtagttaactgccgaggaaa 17924278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18205814 - 18205860
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||    
T  18205814 cggctgcagttaactgccaaggaaaacctcggtagttaactgccgag 18205860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21406295 - 21406345
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  21406295 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 21406345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21800787 - 21800837
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  21800787 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 21800837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21835224 - 21835174
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  21835224 cggctgcagttaactaccgaggaaaacttcggtatttaactgccgaggaaa 21835174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22014274 - 22014324
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| |||||| |||||||||    
T  22014274 cggcggcagttaactgccgaggaaaacctcggtagttaactaccgaggaaa 22014324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41855396 - 41855442
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||| || |||| |||||| |||||    
T  41855396 cggctgcagttaactgccgaggaaaacctcggtagttaactaccgag 41855442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 1056241 - 1056196
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||||| ||||| | |||||||| |||||||    
T  1056241 gcagttaactgccgaggaaaaccttgggagttaactgctgaggaaa 1056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2147002 - 2146957
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||| ||||||||||||||| || |||| |||||||||||    
T  2147002 cggctgcagtaaactgccgaggaaaacctcggtagttaactgccga 2146957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3641674 - 3641719
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||||| |||||||| || || |||||||||||||    
T  3641674 cggctgcagttaactgctgaggaaaacctcgggaattaactgccga 3641719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18438662 - 18438707
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    |||||||||||||||||||||||||| || || | |||||||||||    
T  18438662 cggctgcagttaactgccgaggaaaacctcgggagttaactgccga 18438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32383250 - 32383205
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||    
T  32383250 cggctgcagttaactaccgaggaaaacctcggtagttaactgccga 32383205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32437205 - 32437160
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||    
T  32437205 cggctgcagttaactaccgaggaaaacctcggtagttaactgccga 32437160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 483844 - 483892
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  483844 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 483892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15033192 - 15033144
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||| ||||||||||||| ||| || |||| ||||||||||||||    
T  15033192 cggctgcaattaactgccgagggaaacctcggtagttaactgccgagga 15033144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22519607 - 22519559
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  22519607 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 22519559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36677974 - 36677926
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| ||||||||||||||||||||| || |||| ||||||||| ||||    
T  36677974 cggcggcagttaactgccgaggaaaacctcggtagttaactgccaagga 36677926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40740934 - 40740982
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    ||||||||||||||||||||||||||  | || | ||||||||||||||    
T  40740934 cggctgcagttaactgccgaggaaaacttcggcagttaactgccgagga 40740982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 37 - 298
Target Start/End: Original strand, 7537250 - 7537509
Alignment:
Q  37 taactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacca 136  Q
    ||||||||||||||||   |||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7537250 taactgccgaggaaaactgattatgcagacagtgaattctgcataattctaaagcatttccaagccatttttcggccagtttttacctgtaattaaacca 7537349  T
Q  137 gaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaa 236  Q
    || |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7537350 gagcatttccaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaa 7537447  T
Q  237 ccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||||    
T  7537448 ccgacatttggttaaaattacacaaacgtttgaaattcatctaaacattacaaagtgtccat 7537509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 36 - 317
Target Start/End: Original strand, 29286266 - 29286544
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||||||||| | | || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29286266 ttaactgccgaggaaaa-caattatgcagacagtaggttctgcataattctaaagcatttccaagccatttttcggccagtttttacttgtaattaaacc 29286364  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| ||||| |||||||||  ||||||||||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29286365 agagcattttcaaaggcaa--tataaatcatacaacgttgaaactcggtcttaaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 29286462  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  29286463 accgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 29286544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 23958918 - 23959232
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||| |||||||||||| || |||| |||||||||||| ||||    ||||||||||| |||||| |||||||||||||||||||||||||    
T  23958918 cggctgcagttaaatgccgaggaaaacctcggtagttaactgccgagaaaaactggttatgcagacagtggattctgcataattctaaagcatttccaag 23959017  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||| |||| |||||||||||||||||||||| |||||||||||||||  ||||| | |||||||||| |||||| |||||||| ||| |||||    
T  23959018 ccatttttcgaccagattttacctgtaattaaaccagagcatttccaaaggcaa--tataacttatacaacatttaaactcagtcataaacaagtaaaat 23959115  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgc 300  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||      
T  23959116 acaatattttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataa 23959215  T
Q  301 ataaacaacacattaca 317  Q
     ||||||||||||||||    
T  23959216 ttaaacaacacattaca 23959232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 18610242 - 18609964
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| ||| |||||||| | ||| || |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  18610242 ttaactgccgaggaaaa-caactatgcagatagtgggttctgcataattctaaagcatttccaagccatttttcggtcagtttttacatgtaattaaacc 18610144  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| ||||| |||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18610143 agagcattttcaaaggcaa--tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaa 18610046  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  18610045 accgacatctggttcgaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 18609964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 52 - 343
Target Start/End: Complemental strand, 29667827 - 29667538
Alignment:
Q  52 aacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaagg 151  Q
    |||| ||||||||||| ||| || |||||||||| |||||| |||||||||| ||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  29667827 aacatttatgcagacagtgggttttgcataattccaaagcacttccaagccatttttcggccagtttttatctgtaatttaaccagagcattttcaaagg 29667728  T
Q  152 caaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttca 251  Q
    |||  ||||| | ||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29667727 caa--tataacttatacaacttttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttca 29667630  T
Q  252 aattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    || |||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  29667629 aaatacacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacaacacattacaactcattacacatcattaaattaaat 29667538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 25141115 - 25140837
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||||||||||| |||||||| ||||| ||| || |||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||    
T  25141115 ttaactgccgaggaaaa-caattatggagacagtgggttctgcataattctaaagcattttcaagccatttttcggccaagttttacctgtaattaaacc 25141017  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    |||||||||||||||||||  |||||||||||||| ||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  25141016 agaacatttccaaaggcaa--tataaatcatacaatattgaaactcggccataaacaagaaaaatacaatatcatttacaattgtccataattaaatcaa 25140919  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||   |||||||| |||||||    
T  25140918 accgacatttggttcaaattaaacaaacgtttgaaattcatcaacacgttacaaagtgtccataattaaacaactcattaca 25140837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 5 - 294
Target Start/End: Original strand, 2051060 - 2051346
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccac 104  Q
    |||||||||||||||||||||| || |||| ||| |||| |||||||| |||||||||||||| ||| |||||||||||||||| |||||| ||||| |     
T  2051060 tgcagttaactgccgaggaaaacctcggtagttatctgcagaggaaaa-caattatgcagacagtgggttatgcataattctaatgcattttcaagcaat 2051158  T
Q  105 ttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||  |||||||||||||||||| ||||||| ||||||  |||||||||||||    
T  2051159 ttttcggccagtttttatctgtaattaaaacagagcatttccaaaggcaa--tataaatcatacaacattgaaactcgatcataaccaagaaaaatacaa 2051256  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| || |||||||    
T  2051257 tatcttttacagttgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgataaaaagtgt 2051346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 11840295 - 11840022
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||| ||||||||| || |||| ||||||||||||||||    ||||||||| || ||   | |||||||||||||| ||||||||||    
T  11840295 cggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcataattctaaaacatttccaag 11840196  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| |||||||  |||||| |||| ||||    
T  11840195 ccatttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaata--attcatacaacattgaaactcgaacataaacaagataaat 11840098  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcat 276  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11840097 acaatatcttttacaattgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcat 11840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 31151074 - 31150796
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    ||||||||| |||||||  ||||||||||||  ||| || ||||||||||||||  |||||||||||| |||||| ||||||||||||| ||||||| ||    
T  31151074 ttaactgccaaggaaaacaaattatgcagactgtgggttctgcataattctaaat-atttccaagccatttttcgcccagtttttacctataattaatcc 31150976  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaa 235  Q
    ||| |||||||||||||||||||  | |||||||||||| |||||||| |||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  31150975 agagcatttccaaaggcaaaata--attcatacaacattgaaactcggacataaacaaggtaaatacaatatcttttacaattgtccataattaaatcaa 31150878  T
Q  236 accgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattaca 317  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||    
T  31150877 accgacatttggttccaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattaca 31150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 28362776 - 28362485
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaaca-attatgcagacaatggattatgcataattctaaagcatttccaa 99  Q
    |||||||||||||||||||||||||| || | || |||||||| |||||||     ||||||||| || ||  || |||||||||||||| |||||||||    
T  28362776 cggctgcagttaactgccgaggaaaacctcgatagttaactgcagaggaaatctggattatgcaggcagtgtgttctgcataattctaaa-catttccaa 28362678  T
Q  100 gccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||| |||||| ||||||||||||||| ||||||||    
T  28362677 gccatttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa--tataaatcatataacattgaaactcggtcataaacaagaaaaa 28362580  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  28362579 tacaatatcttttacagttgtctaaaattaaattaaaccgacatttggttcaaattacacaaccgattgaaattcaacaaaacgttacaaagtgt 28362485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 6 - 298
Target Start/End: Complemental strand, 18351683 - 18351393
Alignment:
Q  6 gcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccact 105  Q
    ||||||||||||||||||||| || |||| ||||||||||| ||||    |||||||||||| ||| || |||||||||||||| ||||||| ||||| |    
T  18351683 gcagttaactgccgaggaaaacctcggtagttaactgccgaagaaatctgattatgcagacagtgggttctgcataattctaaa-catttccgagccatt 18351585  T
Q  106 ttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||  | |||||||| ||| |||||||| |||||  |||| || |||||    
T  18351584 ttttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaata--attcatacaagattgaaactcggacataatgaagataagtacaa 18351487  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  18351486 tatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccat 18351393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 31771786 - 31771505
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||||||||  |||||||||||||||| | | | ||| |||||||| ||||||||||    
T  31771786 cggctgcagttaactgccgaggaaaatctcggtagttaattgccgaggaaaataaattatgcagacaatgaactcttcatgattctaaaacatttccaag 31771687  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| | |||| ||||||||| ||||||||  ||| |||||| ||||||||||||  | |||||||||||| |||||||| |||||| ||||||||    
T  31771686 ccattttttcagccattttttacctttaattaaagtagatcatttcgaaaggcaaaata--attcatacaacattgaaactcggacataaacaagaaaaa 31771589  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  31771588 tacaatattttttacaattgttcataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcataacg 31771505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 50 - 312
Target Start/End: Complemental strand, 26702698 - 26702448
Alignment:
Q  50 aaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaa 149  Q
    |||||||||||||||||| ||| || ||||||||||||||||         ||| |||||| ||| ||||||| |||||||||| |||| ||||||||||    
T  26702698 aaaacaattatgcagacagtgggttctgcataattctaaagc---------ccatttttcgaccaatttttacatgtaattaaatcagagcatttccaaa 26702608  T
Q  150 ggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggtt 249  Q
    ||||   |||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26702607 ggcag--tataaatcatacaacatagaaattcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaat-aaaccgacatttggtt 26702511  T
Q  250 caaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacaca 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  26702510 caaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaacaca 26702448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 13382657 - 13382932
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||   |||||||||||| ||| |  ||||||||| |||| ||||||||||    
T  13382657 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggtc-tgcataattgtaaa-catttccaag 13382754  T
Q  101 ccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaat 200  Q
    ||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||  || |||||||| |||||  |||| || |    
T  13382755 ccatttttcgaccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagtttgaaactcggacataataaagataact 13382852  T
Q  201 acaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaa 280  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||    
T  13382853 acaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 13382932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 3502634 - 3502429
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||| |||| |  |||||||| |||||||||||||||||| |||||| |||||| |||||||||| |  | ||||||||||||     
T  3502634 tgcatcattctaaaacatttacaagtcttttttcggctagtttttacctgtaattacaccagagcatttcaaaaggcaaaaca--attcatacaacattg 3502537  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    ||||| || |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3502536 aaacttggccataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattca 3502437  T
Q  276 tcaaaacg 283  Q
    ||| ||||    
T  3502436 tcataacg 3502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 36 - 298
Target Start/End: Original strand, 1608355 - 1608617
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    ||||||||||||||||    ||||||||||||   | || ||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||    
T  1608355 ttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaa-gtatttccaagccattttttcggccagtttttacctgtaattaaac 1608453  T
Q  135 cagaacatttccaaaggcaaaatataaatcatac--aacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaat 232  Q
    |||| |||||||||| | ||  ||||| |||||   |  ||| |||||||| |||||  |||| |||||||||||||||||||||||| |||||||||||    
T  1608454 cagagcatttccaaaagtaa--tataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaat 1608551  T
Q  233 caaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     |||||||||||||||| |||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  1608552 taaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccat 1608617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 2258360 - 2258540
Alignment:
Q  48 gaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttcca 147  Q
    |||||||||||||||||||| || ||| ||||||||||||||| |||| |||| || ||||| | ||| |||||| ||||||||||||||| ||||| ||    
T  2258360 gaaaaacaattatgcagacagtgaattctgcataattctaaagaattttcaagtcatttttcagtcagattttacttgtaattaaaccagagcattttca 2258459  T
Q  148 aaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaa 230  Q
    |||||||  ||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2258460 aaggcaa--tataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatcttttacaattgtccataattaa 2258540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 8304570 - 8304715
Alignment:
Q  106 tttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaat 205  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||  ||||  ||||||||||||   |||| |||||||| |||||||||||| |    
T  8304570 tttcggccagtttttacatgtaattaaaccagagcatttccaaagccaa--tatacctcatacaacatttgcactcagtcataaacaagaaaaatacatt 8304667  T
Q  206 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8304668 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaa 8304715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 317
Target Start/End: Original strand, 34230611 - 34230822
Alignment:
Q  105 ttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaa 204  Q
    |||||||||||||||||||| ||||| |||||||  |||| |||||||||  ||||  || ||||||||| | |||| |||||||| || |||||||||     
T  34230611 ttttcggccagtttttacctataattcaaccagattatttgcaaaggcaat-tatag-tcgtacaacatttatactcagtcataaagaataaaaatacat 34230708  T
Q  205 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaag-tttgaaattcatcaaaacgttacaaagtgtccatgcata 303  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||  || | |||||||||||||||||| ||| | |||||||||   ||    
T  34230709 tatcttttacaattgtctataattaaatcaaaccgacatttcgttaaaattacatgaatgctttgaaattcatcaaaacattaaagagtgtccataatta 34230808  T
Q  304 aacaacacattaca 317  Q
    ||||||||||||||    
T  34230809 aacaacacattaca 34230822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 327
Target Start/End: Complemental strand, 20448736 - 20448508
Alignment:
Q  96 ccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataaga 195  Q
    |||||||| |||||||||  |||||| |||||||| ||||||| ||||| || ||||||  ||||| ||||||| |||| | |||  |||||||| ||||    
T  20448736 ccaagcca-ttttcggcctatttttatctgtaattcaaccagagcatttacagaggcaa--tataactcatacaccatttatacttagtcataaacaaga 20448640  T
Q  196 aaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtc 295  Q
    | |||||| ||||||||||| ||||||||||||||||||| ||||||||| ||| |||||| |  || ||||||||||||| ||||| ||| | ||||||    
T  20448639 agaatacattatcttttacagttgtccataattaaatcaatccgacatttcgttaaaattagaggaatgtttgaaattcataaaaacattaaagagtgtc 20448540  T
Q  296 catgcataaacaacacattacaattcattaca 327  Q
    |||   ||||||||||||| ||  ||||||||    
T  20448539 cataattaaacaacacatttcatatcattaca 20448508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 116 - 298
Target Start/End: Complemental strand, 20439935 - 20439755
Alignment:
Q  116 tttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttaca 215  Q
    ||||||||||| ||| ||||||| |||||||| ||||||  || || ||||||| |||| | |||  |||||||| ||||  |||||| |||||||||||    
T  20439935 tttttacctgttattcaaccagagcatttccagaggcaa--tacaactcatacaccatttatacttagtcataaacaagaggaatacattatcttttaca 20439838  T
Q  216 attgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
     ||||||||||||||||||| ||||||||| ||| ||||||||  || ||||||||||||| ||||| ||| | |||||||||    
T  20439837 gttgtccataattaaatcaatccgacattttgttaaaattacaggaatgtttgaaattcatgaaaacattaaagagtgtccat 20439755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 282
Target Start/End: Original strand, 19129120 - 19129281
Alignment:
Q  116 tttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttaca 215  Q
    ||||||||||||||||||||| |||||||||| | ||||  || || ||| ||| |||| | |||| |||||||| |||||   | || |||||||||||    
T  19129120 tttttacctgtaattaaaccacaacatttccagatgcaa--taaaactcacacaccatttatactcagtcataaacaagaa---tgcattatcttttaca 19129214  T
Q  216 attgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
     ||||||||||||||||||| | ||||||| ||| ||||||||| || |||||||||||||||||||    
T  19129215 gttgtccataattaaatcaatctgacatttcgttgaaattacacgaatgtttgaaattcatcaaaac 19129281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 282
Target Start/End: Complemental strand, 20436247 - 20436063
Alignment:
Q  96 ccaagccacttttcggccagttttt-acctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataag 194  Q
    |||||||| ||||||||| |||||| |||||| ||| ||||||| |||||||| ||  |||||| || ||||||| |||| | |||  |||||||| |||    
T  20436247 ccaagcca-ttttcggcctgttttttacctgttattcaaccagagcatttccagag--aaaatacaattcatacaccatttatacttagtcataaacaag 20436151  T
Q  195 aaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaac 282  Q
    |  |||||| ||||||||||| |||||||| |||||||||| |||||||||  || ||||||||  || ||||||||||||| |||||    
T  20436150 aggaatacattatcttttacagttgtccatgattaaatcaatccgacattttattaaaattacatgaatgtttgaaattcatgaaaac 20436063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 2259338 - 2259428
Alignment:
Q  228 taaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcataaacaacacattacaa 318  Q
    ||||| |||||||||||||||||||| | |||||||  ||||||||||||||||||||||| |||||||||   |||||||||||||||||    
T  2259338 taaatgaaaccgacatttggttcaaaatgcacaaaatgttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacaa 2259428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6204855 - 6204903
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  6204855 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 6204903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11691822 - 11691870
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  11691822 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 11691870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22305136 - 22305184
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  22305136 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 22305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13388753 - 13388702
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||||||||||||| ||||||||| || |||| |||||||||||||||||    
T  13388753 cggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaa 13388702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26712076 - 26712127
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  26712076 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 26712127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28249913 - 28249964
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  28249913 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 28249964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18606072 - 18606118
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||    
T  18606072 cggctgcagttaactgccgaggaaaacctcggtacttaactgccgag 18606118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29076368 - 29076318
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||||||    
T  29076368 cggctgcagttaactgctgaggaaaacctcggtagttaactgccgaggaaa 29076318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29109901 - 29109851
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||||||    
T  29109901 cggctgcagttaactgctgaggaaaacctcggtagttaactgccgaggaaa 29109851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29111341 - 29111291
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||||||    
T  29111341 cggctgcagttaactgctgaggaaaacctcggtagttaactgccgaggaaa 29111291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31768781 - 31768831
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||| |||||||||||| || |||| ||||||||||||||||    
T  31768781 cggctgcagttaattgccgaggaaaacctcggtagttaactgccgaggaaa 31768831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 13404675 - 13404632
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||    
T  13404675 gctgcagttaactgccgtggaaaaccttggtagttaactgccga 13404632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26351141 - 26351090
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || || | |||||||||||||||||    
T  26351141 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaa 26351090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9048103 - 9048153
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||| ||||||||||  | |||| ||||||||||||||||    
T  9048103 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaa 9048153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27616743 - 27616793
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||| ||||| || |||| ||||||||||||||||    
T  27616743 cggcggcagttaactgccgaagaaaacctcggtagttaactgccgaggaaa 27616793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9049129 - 9049080
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    ||||||||||||||| ||||||||||  | |||| |||||||||||||||    
T  9049129 cggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaa 9049080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 17338808 - 17338763
Alignment:
Q  2 ggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||||||||||||||||||||||||  | || ||||||||||||||    
T  17338808 ggctgcagttaactgccgaggaaaacttcggcaattaactgccgag 17338763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31146401 - 31146450
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaa 50  Q
    |||||||||||||||| |||||||||  | |||| |||||||||||||||    
T  31146401 cggctgcagttaactgtcgaggaaaacatcggtagttaactgccgaggaa 31146450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6207105 - 6207057
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  6207105 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 6207057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11694072 - 11694024
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  11694072 cggcggcagttaattgccgaggaaaacctcggtagttaactgccgagga 11694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 20157 - 19866
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||| |||||||||| ||||||||  || |||| || ||||||||||||||   |||||||||||| ||| || |||||||||||||||||||||||||    
T  20157 cggctacagttaactgtcgaggaaatcctcggtagtttactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaagcatttccaag 20058  T
Q  101 c-cacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    |    ||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||    
T  20057 cttttttttcggtcagtttttacctgtaattaaaccagagcatttccaaaggc--aatataaatcatacaacattgaaactcggtcataaacaagaaaaa 19960  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  19959 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatcaaaacgttacaaagtg 19866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 317
Target Start/End: Complemental strand, 15998 - 15686
Alignment:
Q  3 gctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagcc 102  Q
    |||||||||||||||||||||||| || |||| |||||| ||||||||||   |||||||||||| ||  || |||||||||||||| |||||| |||||    
T  15998 gctgcagttaactgccgaggaaaacctcggtagttaacttccgaggaaaactgattatgcagacagtgagttctgcataattctaaa-catttctaagcc 15900  T
Q  103 actt-ttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaata 201  Q
    | || |||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||| |||| |||||    
T  15899 atttgttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataaacaagataaata 15802  T
Q  202 caatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgca 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||       
T  15801 caatatcttttacaattgtccataattaaattaaaccgacatttagttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataat 15702  T
Q  302 taaacaacacattaca 317  Q
    |||||||| |||||||    
T  15701 taaacaactcattaca 15686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 158; Significance: 5e-84; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 86 - 343
Target Start/End: Original strand, 21762 - 22005
Alignment:
Q  86 taaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtc 185  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||| ||| |||||||       
T  21762 taaagcatttctaagccatttttcggccagtttttacctgtaattaaaccagagcatttccaaaagcaa--tataaatcatacaatattgaaactcg--- 21856  T
Q  186 ataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgtt 285  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21857 ---------aaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgtt 21947  T
Q  286 acaaagtgtccatgcataaacaacacattacaattcattacacatcattaaattaaat 343  Q
    | |||||||||||   ||||||||||||||||| |||||||||||||||| |||||||    
T  21948 aaaaagtgtccataattaaacaacacattacaactcattacacatcattatattaaat 22005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23272 - 23227
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccga 46  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  23272 cggctgcagttaactaccgaggaaaatattgataattaactgccga 23227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 5 - 317
Target Start/End: Original strand, 8231 - 8541
Alignment:
Q  5 tgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccac 104  Q
    ||||||||||||| || ||||| || |||| ||||||||| |||||||   |||||||||||| ||| || |||||||||||||| |||||||||||||     
T  8231 tgcagttaactgctgaagaaaacctcggtagttaactgccaaggaaaactgattatgcagacagtgggttctgcataattctaaa-catttccaagccat 8329  T
Q  105 tttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaataca 203  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| || ||||    
T  8330 tttttcggccagtttttacctgtaattaaaccaaagcatttccaaaggcaaaata--attcatacaagattgaaactcgggcataatcaagataagtaca 8427  T
Q  204 atatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcata 303  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||   ||    
T  8428 atatcttttacaattgttcataattaaattaaaccaacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataatta 8527  T
Q  304 aacaacacattaca 317  Q
    |||||| |||||||    
T  8528 aacaactcattaca 8541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22431 - 22719
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaag 100  Q
    ||||||||||||||||| |||||||| || |||| |||||||||||||||||   ||||||||  || ||  || |||||||||||||| ||||||||||    
T  22431 cggctgcagttaactgctgaggaaaatctcggtagttaactgccgaggaaaactgattatgca--cagtgagttctgcataattctaaa-catttccaag 22527  T
Q  101 ccactttt-cggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaa 199  Q
    ||| |||| |||||| ||||||||||||||||||||||| |||||||||||||||||||  | |||||||| ||| |||||||| |||||  |||| |||    
T  22528 ccattttttcggccaatttttacctgtaattaaaccagagcatttccaaaggcaaaata--attcatacaagattgaaactcggacataatcaagataaa 22625  T
Q  200 tacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgt 294  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| | ||||||||||||||||| |||||||||||    
T  22626 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacg-ttgaaattcatcaaaacattacaaagtgt 22719  T

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Target: scaffold0494 (Bit Score: 138; Significance: 4e-72; HSPs: 4)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 36 - 298
Target Start/End: Complemental strand, 5337 - 5076
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccactttt-cggccagtttttacctgtaattaaac 134  Q
    |||||||||||||||||   |||||||||||| ||| || |||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||    
T  5337 ttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaga-catttccaagccattttttcggccagtttttacctgtaattaaac 5239  T
Q  135 cagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatca 234  Q
    |||| ||||||||||||| |||||  | |||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||| |    
T  5238 cagagcatttccaaaggctaaata--attcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatta 5141  T
Q  235 aaccgaca-tttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccat 298  Q
    |||||||| ||||||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  5140 aaccgacattttggttaaaattaaacaaacgtttgaaattcatgaaaacattacaaagtgtccat 5076  T

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Target: scaffold0494; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 859 - 910
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||||| ||||||||||||||||||| || |||| |||||||||||||||||    
T  859 cggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5359 - 5410
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  5359 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 5410  T

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Target: scaffold0494; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 892 - 935
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    ||||||||||||||||||| || |||| ||||||||||||||||    
T  892 agttaactgccgaggaaaacctcggtagttaactgccgaggaaa 935  T

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Target: scaffold0169 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 215
Target Start/End: Complemental strand, 1693 - 1517
Alignment:
Q  36 ttaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaacc 135  Q
    |||||||| |||||||| |||||||||||||| ||| || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  1693 ttaactgctgaggaaaa-caattatgcagacagtgggttctgcataattctatagcatttccaagccatttttcggccagtttttacctgtaattaaacc 1595  T
Q  136 agaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatatcttttaca 215  Q
    ||| |||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1594 agagcatttccaaaggc--aatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttaca 1517  T

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Target: scaffold0199 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 76 - 278
Target Start/End: Original strand, 12506 - 12706
Alignment:
Q  76 tgcataattctaaagcatttccaagccacttttcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacatta 175  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||| |||||| |  | ||||||||||||     
T  12506 tgcatcattctaaaacatttccaagccttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaagcaaaaca--attcatacaacattg 12603  T
Q  176 aaactcggtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattca 275  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||    
T  12604 aaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattttgtttaaattacacaaacgtttaaaattca 12703  T
Q  276 tca 278  Q
    |||    
T  12704 tca 12706  T

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Target: scaffold0199; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12433 - 12385
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||||||||||||||| ||||| || |||| ||||||||||||||    
T  12433 cggctgcagttaactgccgatgaaaacctcggtagttaactgccgagga 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10680 - 10728
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| ||||||||||||||||| ||| || |||| ||||||||||||||    
T  10680 cggcggcagttaactgccgagggaaacctcggtagttaactgccgagga 10728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 283
Target Start/End: Complemental strand, 236272 - 236001
Alignment:
Q  8 agttaactgccgaggaaaaacttggtaattaactgccgaggaaaaacaattatgcagacaatggattatgcataattctaaagcatttccaagccacttt 107  Q
    |||||||||| ||||||||  | |||| ||||||||||||||||    |||  ||||||| ||   | ||||| |||||||| ||||||||| ||  |||    
T  236272 agttaactgcagaggaaaacttcggtagttaactgccgaggaaatctgatt--gcagacagtgagctctgcatcattctaaaacatttccaaaccttttt 236175  T
Q  108 tcggccagtttttacctgtaattaaaccagaacatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaataagaaaaatacaatat 207  Q
    ||| ||||||||||||||||||||||||||| |||||| |||||||||| |  | |||||||| ||| |||||| | |||||| |||| |||||||||||    
T  236174 tcgaccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaaca--attcatacaatattgaaactcagacataaacaagataaatacaatat 236077  T
Q  208 cttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacg 283  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  236076 cttttacaattgtccataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatcataacg 236001  T

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Target: scaffold0794 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5299 - 5350
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||||||    
T  5299 cggctgcagttaactaccgaggaaaacctcggtagttaactgccgaggaaaa 5350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50075 - 50126
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||||||||||| || |||| |||||||||||||||||    
T  50075 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaa 50126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 468 - 418
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || |||| ||||||||||||||||    
T  468 cggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaa 418  T

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Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17396 - 17346
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  17396 cggctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaaa 17346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15667 - 15621
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgag 47  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  15667 cggcggcagttaactgccgaggaaaaccttggtagttaactgccgag 15621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 232877 - 232827
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||||||| ||||||||||||||||| || |||| ||||||||||||||||    
T  232877 cggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggaaa 232827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36579 - 36531
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||||||| ||||||||||||||||| || |||| ||||||||||||||    
T  36579 cggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 36531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41067 - 41017
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaa 51  Q
    |||| ||||||||||||||||||||| || || | ||||||||||||||||    
T  41067 cggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaa 41017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 767 - 716
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgaggaaaa 52  Q
    |||| ||||||||||||| ||||||| || |||| |||||||||||||||||    
T  767 cggcggcagttaactgcccaggaaaacctcggtagttaactgccgaggaaaa 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 84608 - 84656
Alignment:
Q  1 cggctgcagttaactgccgaggaaaaacttggtaattaactgccgagga 49  Q
    |||| |||||||| |||||||||||| || |||| ||||||||||||||    
T  84608 cggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagga 84656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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