View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17087_high_67 (Length: 234)
Name: NF17087_high_67
Description: NF17087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17087_high_67 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 32731377 - 32731156
Alignment:
| Q |
13 |
aatattaatgtatagctacaaaattatgtaataaatttattctttccattttacttatagaacaagtcttttagattcatatattggctcatctagtttt |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32731377 |
aatattaatgtatagctacaaaattatgtaataaatttaatctttccattttacttatagaacaagtcttttagattcatatattggctcatctagtttt |
32731278 |
T |
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| Q |
113 |
catatcatatcacattagggttaggtcatgtgtttgcacaaaaaatatcaactcgggttcctcgttcatgcagtcgagacataggtggccgttcaatcaa |
212 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32731277 |
catatcatatcacattagtgttaggtcatgtgtttgcacaaaaaatatcaactcgggttcctcgttcacgcagtcgagacataggtggccgttcaatcaa |
32731178 |
T |
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| Q |
213 |
gatcaaaatgttcaaaaaatat |
234 |
Q |
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|||||||||||| ||||||||| |
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| T |
32731177 |
gatcaaaatgttaaaaaaatat |
32731156 |
T |
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