View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17087_low_25 (Length: 375)
Name: NF17087_low_25
Description: NF17087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17087_low_25 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 14178708 - 14179053
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14178708 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
14178807 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178808 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
14178903 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
14178904 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttattgctaccgctgcgctgcaagatccagtctct |
14179003 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14179004 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
14179053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 14173954 - 14174299
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14173954 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
14174053 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174054 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
14174149 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
14174150 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctct |
14174249 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174250 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
14174299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 28611916 - 28611571
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28611916 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
28611817 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611816 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
28611721 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
28611720 |
ttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctct |
28611621 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611620 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
28611571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 28607154 - 28606809
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28607154 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
28607055 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607054 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
28606959 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||| |
|
|
| T |
28606958 |
ttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctct |
28606859 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606858 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
28606809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 44161603 - 44161946
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44161603 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
44161702 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161703 |
gtcttacgggaaacactatattgtatctct----tgtgtgtgtaagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagt |
44161796 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44161797 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctct |
44161896 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161897 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
44161946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 11104486 - 11104826
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| | |
|
|
| T |
11104486 |
gtgttgagtaaatccagagagtgtaggaaaaatacaccgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgg |
11104585 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
11104586 |
gtctcacgggaaacactatattgtatctct-----ttgtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagt |
11104680 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctctttt |
300 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||| ||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
11104681 |
ttgtcccgtgg-tttaccctcgatattagaggattttctatgttaaatattggtgttcatttttatcgctacagctgcgctgcaagatccaatctctttt |
11104779 |
T |
|
| Q |
301 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104780 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
11104826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 46 - 347
Target Start/End: Complemental strand, 48827000 - 48826705
Alignment:
| Q |
46 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnna |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgta----a |
48826905 |
T |
|
| Q |
146 |
gagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtta |
245 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| |
|
|
| T |
48826904 |
gagagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgtta |
48826806 |
T |
|
| Q |
246 |
aatattggtgttc-annnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
344 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| | |
|
|
| T |
48826805 |
aatattggtgttctttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatc |
48826708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
153 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattg |
252 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
253 |
gtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttaca |
323 |
Q |
| |
|
|| || | || ||| ||||| || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtatttaattttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 24726381 - 24726288
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
238 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||||| |
|
|
| T |
24726381 |
agagaatggagagaatattattatgttctttaatataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 12930693 - 12931037
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
12930693 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtag |
12930792 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930793 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
12930888 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
12930889 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctctt |
12930988 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930989 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
12931037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 12935439 - 12935783
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
12935439 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtag |
12935538 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935539 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
12935634 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |
|
|
| T |
12935635 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttctt |
12935734 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935735 |
ttgaattttggaattttaatttacacttgcgttaagctcgtcgagccca |
12935783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 26505055 - 26504985
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
215 |
Q |
| |
|
||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
26505055 |
agagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggtttt |
26504985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
147 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaa |
246 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || |||||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
247 |
atattggtgttca |
259 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
342 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 34907156 - 34907500
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
34907156 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtag |
34907255 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907256 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
34907351 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
34907352 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctctt |
34907451 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907452 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
34907500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 37040774 - 37040429
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37040774 |
gtgttgagtaaatccagagagtgtgggaaaaatacatcgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
37040675 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040674 |
gtctcacggaaaacactatattgtatctct----tgtgtgtgtgagagagtggagaaaatattgtaatattctttaatatagtggaatatttttcggagt |
37040579 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |
|
|
| T |
37040578 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtcttt |
37040479 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040478 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
37040429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 15290249 - 15290591
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| | |
|
|
| T |
15290249 |
gtgttgactaaatccagaaagtgtgg-aaaaatacaccgggtgggtatcatctctataacttctaggtgctgaaata--atagcattcgaataggagtgg |
15290345 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||| ||||| |
|
|
| T |
15290346 |
gtctcacgg-aaacactatattgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagt |
15290440 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc- |
296 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
15290441 |
ttgtcccgtggtttatacctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctct |
15290540 |
T |
|
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15290541 |
ttttggattttgaaattttaatttacaattgcgttaagctcgtcgagccca |
15290591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 45 - 347
Target Start/End: Original strand, 12099060 - 12099358
Alignment:
| Q |
45 |
gtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnn |
144 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||| |
|
|
| T |
12099060 |
gtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgta---- |
12099155 |
T |
|
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| ||||| |
|
|
| T |
12099156 |
agagagtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttcacgta |
12099255 |
T |
|
| Q |
245 |
aaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
344 |
Q |
| |
|
|||||||| | |||| |||| || || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
12099256 |
aaatattgcttttcatttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtcgagc |
12099355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 12082055 - 12082227
Alignment:
| Q |
25 |
gggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgt |
124 |
Q |
| |
|
|||||||||| | ||||| ||||| |||||||||||||||||| ||||||| |||||| |||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
12082055 |
gggaaaaatatatcgggtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcgagtctcattagaaacactatattgt |
12082154 |
T |
|
| Q |
125 |
atctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagttt |
202 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12082155 |
atctct----tttccgtgtaagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 12084669 - 12084748
Alignment:
| Q |
268 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||| |||||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| ||||||| |
|
|
| T |
12084669 |
gctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagccca |
12084748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 2757418 - 2757307
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
244 |
Q |
| |
|
||||||||||||||||| || |||||| || |||||||||||||| ||||| | |||||| | |||||||||| | || |||| |||| ||| || || |
|
|
| T |
2757418 |
agagagtggagagaatagtgcaatatttttaaatatagtggaata-ttttcaaaatttgtctcatggtttttccttaagcattaaaggggttttcatatt |
2757320 |
T |
|
| Q |
245 |
aaatattggtgtt |
257 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757319 |
aaatattggtgtt |
2757307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 2757273 - 2757236
Alignment:
| Q |
290 |
caatctcttttggattttggaattttaatttacacttg |
327 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
2757273 |
caatttcttttgaattttggaattttaatttacacttg |
2757236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 29107223 - 29106881
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtggg-tatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
29107223 |
gtgttgagtaaatccagagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagta |
29107124 |
T |
|
| Q |
100 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
199 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107123 |
ggtctcacgggaaacactat-ttgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
29107029 |
T |
|
| Q |
200 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttt |
299 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
29107028 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttaacgctaccgctgcgctgcaagatccaatcttttt |
29106929 |
T |
|
| Q |
300 |
tggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||| |||| |
|
|
| T |
29106928 |
tggattttggaattttaatttacacttgcattaagctcctcgatccca |
29106881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 42911337 - 42910996
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
42911337 |
gtgttgagtaaatccagagagtgtggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtag |
42911238 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
42911237 |
gtctcaagggaaacactatattgtatcttt----tgtgtgtgtgagagagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagt |
42911143 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctctttt |
300 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||| |||||||||| |
|
|
| T |
42911142 |
ttgtcccgtggtttttccctcggtattagagggttttccatgttaaatattggtgttcatttttatcgttgccgctgcgctgcaagatctaatctctttt |
42911043 |
T |
|
| Q |
301 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
42911042 |
ggattttaaaattttaatttccacttgcgttaagctcgtcgagccca |
42910996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
168 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttc |
258 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| ||||||| || ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 38994779 - 38994702
Alignment:
| Q |
270 |
taccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| |||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagccca |
38994702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 8539200 - 8539545
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| | |
|
|
| T |
8539200 |
gtgttcagtaaattcagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgg |
8539299 |
T |
|
| Q |
101 |
gtctcacgggaaacactata---ttgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcgg |
197 |
Q |
| |
|
||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
8539300 |
gtctcacgg-aaacactataatattgtatctcttgtgtgtgta----agagagtggagataatattgtaatattcttaaatatagtggaatatctttcgg |
8539394 |
T |
|
| Q |
198 |
agtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca-nnnnnnnngctaccgctgcgctgcaagatccaatctc |
296 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8539395 |
agtttgtcccgtgatttttccctcggtattagagggttttccacgttaaatattgatgttcattttttattgttaccgctgcgctgcaagatccaatctc |
8539494 |
T |
|
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8539495 |
ttttagaatttggaattttaatttacacttgcgttaagctcgtcgagccca |
8539545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 51302181 - 51302306
Alignment:
| Q |
4 |
ttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtc |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| |||| |
|
|
| T |
51302181 |
ttgagtaaatccagagagtgtggataaaatacaccgggtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtc |
51302280 |
T |
|
| Q |
104 |
tcacgggaaacactatattgtatctc |
129 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
51302281 |
tcacgggaaacactatattgtatctc |
51302306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 51302937 - 51303016
Alignment:
| Q |
268 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatccca |
51303016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 51302308 - 51302344
Alignment:
| Q |
223 |
gtattagagggttttccacgttaaatattggtgttca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 347
Target Start/End: Complemental strand, 2100379 - 2100202
Alignment:
| Q |
168 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnn |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttcaattttatc |
2100283 |
T |
|
| Q |
268 |
gctaccgctgcgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
347 |
Q |
| |
|
|| || || ||||||| | || |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2100282 |
attatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagccca |
2100202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 2100753 - 2100723
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattcttt |
175 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100753 |
agagagtggagagaatattgtaatattcttt |
2100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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