View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17087_low_39 (Length: 315)
Name: NF17087_low_39
Description: NF17087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17087_low_39 |
 |  |
|
| [»] scaffold1377 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 17384229 - 17383939
Alignment:
| Q |
12 |
gaataagcctatattgttcgaaccatcgaatccagtagtagtaaatattgtaagtaacnnnnnnnccgggtatacatctgggaactattgagattcaaac |
111 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
17384229 |
gaataagcctatattgttcgaaccatcaaatccagtagtagtaaatattgtaagtaacaaaaatacccggtatacatctgggaactattgagattcaaac |
17384130 |
T |
 |
| Q |
112 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatgg |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17384129 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatgg |
17384030 |
T |
 |
| Q |
212 |
tcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagtgcataacttcaaatttt |
303 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17384029 |
tcatat-ctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcccaagcttcatagtgcataacttcaaatttt |
17383939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 17392930 - 17392649
Alignment:
| Q |
12 |
gaataagcctatattgttcgaaccatcgaatccagtagtagtaaatattgtaagtaacnnnnnnnccgggtatacatctgggaactattgagattcaaac |
111 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| |||||||||| ||||| | || |||| || ||||||||||| |||||| ||||||||| |
|
|
| T |
17392930 |
gaataagcctatattgttcaaaccatcaaattcagtagtagtgaatatcgaaactaacaaaaacaccaggtatacatctaggaactgctgagattca--- |
17392834 |
T |
 |
| Q |
112 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatgg |
211 |
Q |
| |
|
||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17392833 |
-------gcttacatgtgggagacattcttggacaggaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatgatgaatgg |
17392741 |
T |
 |
| Q |
212 |
tcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagtgcataacttcaaatttt |
303 |
Q |
| |
|
||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17392740 |
tcataacttgtaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagtctataacttcaaatttt |
17392649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 272
Target Start/End: Original strand, 13711792 - 13711944
Alignment:
| Q |
120 |
cttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcatatcc |
219 |
Q |
| |
|
|||||||| |||||||| ||||||| |||||||||| ||||||||||| | ||||||||||| |||||| ||||||||| ||||||||||| | |
|
|
| T |
13711792 |
cttacatgtaggagagattgttggacaggaggataaatcatctaaaaattgggttctctccattggttttgggcgaagagtataaaaaatggtcataatc |
13711891 |
T |
 |
| Q |
220 |
tgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
| ||||||||| |||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
13711892 |
cgtaaaagtctctcattctgcaaaatatatgctgcaaatcggaaatcagcttc |
13711944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 272
Target Start/End: Complemental strand, 17380343 - 17380184
Alignment:
| Q |
119 |
gcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtga--agagtatggcaaatggtcata |
216 |
Q |
| |
|
||||||||| | | ||||||||||| | | |||||||||||||||| |||||||||||| |||||||||||||||| |||| ||| |||||||||||| |
|
|
| T |
17380343 |
gcttacatgcgagggagatccttgggtagggggataaattttctaaagattgagggctcttcattggatttgggtgacgagagaatgacaaatggtcata |
17380244 |
T |
 |
| Q |
217 |
tcctgcaaaagtc----tcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
||| ||||||| || ||||||||||||||||||| | || ||||||||||||||| |
|
|
| T |
17380243 |
atctgtaaaagtcacaatcacattctgcaaaatatatgtcgtgattcgaaaatcagcttc |
17380184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 17377688 - 17377592
Alignment:
| Q |
186 |
atttgggtgaagagtatggcaaatggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttca |
282 |
Q |
| |
|
||||| ||||||| ||||| ||||| |||| | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17377688 |
atttgcgtgaagactatggtgaatggacataacttgtaaaagtctcgcatttcgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttca |
17377592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 80 - 272
Target Start/End: Original strand, 19969176 - 19969368
Alignment:
| Q |
80 |
ggtatacatctgggaactattgagattcaaacaatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctc |
179 |
Q |
| |
|
||||||||||| |||||| | ||||||| | |||||||||||||||| ||||||||| |||| ||| || ||||| | |||||||||||| || ||||| |
|
|
| T |
19969176 |
ggtatacatctaagaactagtaagattcagataatgacagcttacatgcgggagagatacttgaacaggaagataagtcttctaaaaattggggactctc |
19969275 |
T |
 |
| Q |
180 |
cattggatttgggtgaagagtatggcaaatggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
|| |||||||| | | ||||||| || ||||| ||| ||| |||| || |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
19969276 |
caatggatttgagaaactagtatggaggattttcataacctttaaatgtctagcgttctgcaaaatatacgttgcaaatcgaaaatcagcttc |
19969368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 20112274 - 20112200
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatag |
285 |
Q |
| |
|
|||||| |||| | |||||| ||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| |
|
|
| T |
20112274 |
gtcataacctgtagaagtcttgcattctgcaaaatatatgttgcaaattgaaaatcatgttcgaaagcttcatag |
20112200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 286
Target Start/End: Original strand, 19653554 - 19653723
Alignment:
| Q |
117 |
cagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcata |
216 |
Q |
| |
|
||||||||| | ||| ||||| | ||||| |||||||||| | | |||| || |||||| || |||| || ||| ||||||| || ||||||||||| |
|
|
| T |
19653554 |
cagcttacacgtgggcgagattgtaggacaggaggataaatcctttgaaaaatgggggctccccgttggtttcaggtcaagagtacggaaaatggtcata |
19653653 |
T |
 |
| Q |
217 |
tcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagt |
286 |
Q |
| |
|
| || || |||||||||||| ||||||| ||||||| || ||||||||||||| |||||||||||| |
|
|
| T |
19653654 |
acttgtaagagtctcgcattcagcaaaatgtatgttgaaaaaagaaaatcagcttcagaagcttcatagt |
19653723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 17377727 - 17377685
Alignment:
| Q |
117 |
cagcttacatgagggagagatccttggacaagaggataaattt |
159 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
17377727 |
cagcttacatgtgggagagatccttggacaggaggataaattt |
17377685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 27358069 - 27358130
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
||||||||||| |||||||| ||||||| ||| |||||| |||| ||| ||||||||||||| |
|
|
| T |
27358069 |
gtcatatcctgtaaaagtcttgcattcttcaagatatatattgcaaatagaaaatcagcttc |
27358130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 9619253 - 9619197
Alignment:
| Q |
212 |
tcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcag |
268 |
Q |
| |
|
|||||||||| | ||||||||||||||| |||||||| |||| ||||||||||||| |
|
|
| T |
9619253 |
tcatatcctgtagaagtctcgcattctgaaaaatataccttgcaaatcgaaaatcag |
9619197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 26536314 - 26536239
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagt |
286 |
Q |
| |
|
||||||||||| | |||||| ||||||| ||| |||||| |||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
26536314 |
gtcatatcctgtacaagtctagcattcttcaagatatatattgcaaatcgaaaatccgcttctgcagcttcatagt |
26536239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 272
Target Start/End: Original strand, 1347601 - 1347742
Alignment:
| Q |
131 |
gagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcatatcctgcaaaagtct |
230 |
Q |
| |
|
|||||||||| ||||| || ||||||| ||||||||| || | ||||||| ||| | || || | ||||||| |||| ||||| |||| || ||| | |
|
|
| T |
1347601 |
gagagatcctaggacaggaagataaatcttctaaaaaatgggagctctccgttgaagctgagtaactagtatgggaaatattcataacctgtaacagttt |
1347700 |
T |
 |
| Q |
231 |
cgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
||||||| ||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
1347701 |
tgcattcttcaatatataggttgcaaatcggaaatcagcttc |
1347742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 14308643 - 14308587
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatca |
267 |
Q |
| |
|
||||| || |||||| |||| || |||||||||||||||||||| ||||||| |||| |
|
|
| T |
14308643 |
gtcatgtcttgcaaacgtcttgcgttctgcaaaatatatgttgcaaatcgaagatca |
14308587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 32429441 - 32429469
Alignment:
| Q |
230 |
tcgcattctgcaaaatatatgttgcgaat |
258 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32429441 |
tcgcattctgcaaaatatatgttgcgaat |
32429469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 269
Target Start/End: Complemental strand, 15785065 - 15784913
Alignment:
| Q |
117 |
cagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcata |
216 |
Q |
| |
|
||||||||||| ||||||||| ||||||| |||||||| | ||||||| || |||||||| ||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
15785065 |
cagcttacatgtgggagagatttttggacaggaggataagtcttctaaattttttgggctctcaattggttttggggtaagagtacggcaaatggtcata |
15784966 |
T |
 |
| Q |
217 |
tcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagc |
269 |
Q |
| |
|
|||| |||||||| ||||||| ||||| || | |||||||||||||||||| |
|
|
| T |
15784965 |
acctgtaaaagtcttgcattctttaaaatgtaagatgcgaatcgaaaatcagc |
15784913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 26052742 - 26052814
Alignment:
| Q |
231 |
cgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttcatagtgcataacttcaaatttt |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| |
|
|
| T |
26052742 |
cgcattctgcaaaatatatgttgcgaatcgaatatcagtttcacaagcttcatagtctataacttcaaatttt |
26052814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 16258080 - 16258152
Alignment:
| Q |
112 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattg |
184 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| | ||| |||||| |||||||||||| || || ||||||| |
|
|
| T |
16258080 |
aatgacaggttacatgcgggagagatccttggataggagaataaatcttctaaaaattggggactttccattg |
16258152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 14438256 - 14438304
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatc |
259 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
14438256 |
gtcatatcttgtaaaagcctcgcattctgcaaaatatatgatgcaaatc |
14438304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 32224417 - 32224465
Alignment:
| Q |
224 |
aaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
||||||| ||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
32224417 |
aaagtcttgcattctgcaaaatatatgttacaaatcgaaaatcagcttc |
32224465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 32226984 - 32226912
Alignment:
| Q |
112 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattg |
184 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| || |||||||||| |
|
|
| T |
32226984 |
aatgacaggttacatgtcggagagatccttggacagaaggataaatcgtctaaaaatttgggactctccattg |
32226912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 24890692 - 24890631
Alignment:
| Q |
210 |
ggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc |
272 |
Q |
| |
|
||||||| |||| |||||||| ||||| | |||||||||||||||||||||||| ||| |||| |
|
|
| T |
24890692 |
ggtcataacctgtaaaagtctagcatttt-caaaatatatgttgcgaatcgaaagtcaacttc |
24890631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 32241577 - 32241623
Alignment:
| Q |
121 |
ttacatgagggagagatccttggacaagaggataaattttctaaaaa |
167 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
32241577 |
ttacatgccggagagatccttggacaggaggataaatcttctaaaaa |
32241623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 45763906 - 45763964
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagc |
269 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| ||| ||| |||||||||| |
|
|
| T |
45763906 |
gtcatatcctgcaaaagtctagcattcttcaaaatatacgttttaaattgaaaatcagc |
45763964 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 32224305 - 32224373
Alignment:
| Q |
112 |
aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctcc |
180 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||| |||||||||| ||||||||||| || |||||| |
|
|
| T |
32224305 |
aatgacaggttacatgttggagagatccttccacatgaggataaatcatctaaaaattggggactctcc |
32224373 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 32241772 - 32241816
Alignment:
| Q |
223 |
aaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatca |
267 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| | |||||||||||| |
|
|
| T |
32241772 |
aaaaatcttgcattctgcaaaatatatgttacaaatcgaaaatca |
32241816 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 45763806 - 45763866
Alignment:
| Q |
111 |
caatgacagcttacatgagggagagatccttgga-caagaggataaattttctaaaaattg |
170 |
Q |
| |
|
|||||| |||||||||| | |||||||||||||| || |||||||||| ||||||| |||| |
|
|
| T |
45763806 |
caatgaaagcttacatgcgagagagatccttggaccaggaggataaatcttctaaagattg |
45763866 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1377 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1377
Description:
Target: scaffold1377; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 1347 - 1398
Alignment:
| Q |
211 |
gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaa |
262 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
1347 |
gtcatatcttgtaaaagcctcgcattctgcaaaatatatgttgcaaatcgaa |
1398 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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