View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17087_low_49 (Length: 279)
Name: NF17087_low_49
Description: NF17087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17087_low_49 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 17384226 - 17384485
Alignment:
| Q |
1 |
attcaaatcaatggtctaccaattcttggactctcttcataactatatgtacttatcatttccgtatcttacattcacgcttcttgcatatgtgacaatg |
100 |
Q |
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| T |
17384226 |
attcaaatcaatggtctaccaattcttggactctcttcataactatatgtacttatcatttccgtatcttacattcacgcttcttgcatatgtgacaatg |
17384325 |
T |
|
| Q |
101 |
aatattgcatttatttttcaaacagtcattacctttacttcaatttcttgagttattatgcggaaaccttcctctacctttaaaaatctaccctctttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17384326 |
aatattgcatttatttttcaaacagtcattacctttacttcaatttcttgagttattatgcggaaaccttcctctacctttaaaaatctaccctctttgg |
17384425 |
T |
|
| Q |
201 |
ttgcggtttacctctaaaatccctcatttgtcagctttgaaaattatccatggtcgttgt |
260 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
17384426 |
ttgcggtttacctctaaaatccctcatttgtcagctttgcaaattatccatggtcgttgt |
17384485 |
T |
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