View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17089_high_5 (Length: 238)
Name: NF17089_high_5
Description: NF17089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17089_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 3426767 - 3426974
Alignment:
| Q |
15 |
ttgaatctaaccatattaacatggtatacattcaatctaacattcacattcttgttagatgaaactcatatgggttactccactctatgtaggcaccatt |
114 |
Q |
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| T |
3426767 |
ttgaatctaaccatattaacatggtatacattcaatctaacattcacactcttgttagatgaaacccatatgggttactccaatctatgtaagcaccatt |
3426866 |
T |
|
| Q |
115 |
taaaaagtgtgagatttaaattaattttatccaataaaaaagtgttagatatcgtatttaaaagagagtgttcataacacttctcatttttatgataatg |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
3426867 |
taaaaagtgtgagatttaaattaattttatccaataaaagagtgttagatatcgtatttaaaagagagtgttcataacacttctcatttttataataatg |
3426966 |
T |
|
| Q |
215 |
atatatct |
222 |
Q |
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|||||||| |
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| T |
3426967 |
atatatct |
3426974 |
T |
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