View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17089_low_1 (Length: 560)

Name: NF17089_low_1
Description: NF17089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17089_low_1
NF17089_low_1
[»] chr7 (33 HSPs)
chr7 (265-515)||(30216511-30216760)
chr7 (17-139)||(5556417-5556550)
chr7 (17-139)||(7003581-7003714)
chr7 (17-139)||(7049452-7049585)
chr7 (17-139)||(36631771-36631904)
chr7 (17-262)||(36659123-36659370)
chr7 (17-139)||(26625699-26625832)
chr7 (17-139)||(3113201-3113334)
chr7 (17-139)||(38637461-38637594)
chr7 (21-137)||(34468415-34468542)
chr7 (17-139)||(8866810-8866943)
chr7 (20-137)||(8395082-8395210)
chr7 (17-137)||(37001320-37001451)
chr7 (17-136)||(43183551-43183681)
chr7 (174-262)||(8395287-8395375)
chr7 (174-262)||(36631938-36632026)
chr7 (20-136)||(14775677-14775804)
chr7 (20-136)||(15226130-15226257)
chr7 (173-262)||(11019572-11019661)
chr7 (177-262)||(14775551-14775636)
chr7 (177-262)||(15226004-15226089)
chr7 (173-262)||(34468331-34468420)
chr7 (176-262)||(3113093-3113179)
chr7 (94-138)||(33686575-33686619)
chr7 (173-260)||(33686640-33686727)
chr7 (194-262)||(19400226-19400294)
chr7 (53-89)||(21420062-21420098)
chr7 (513-544)||(30216452-30216483)
chr7 (177-262)||(7003747-7003832)
chr7 (177-262)||(7049618-7049703)
chr7 (95-139)||(10224077-10224121)
chr7 (194-262)||(26493574-26493642)
chr7 (95-139)||(45197829-45197873)
[»] chr1 (29 HSPs)
chr1 (278-515)||(43624179-43624416)
chr1 (278-515)||(43994595-43994832)
chr1 (17-262)||(17446248-17446501)
chr1 (17-139)||(23313949-23314082)
chr1 (17-139)||(11957437-11957570)
chr1 (21-139)||(15209367-15209497)
chr1 (17-137)||(32981139-32981270)
chr1 (17-139)||(7434375-7434510)
chr1 (17-262)||(42309902-42310153)
chr1 (23-96)||(33490340-33490414)
chr1 (21-93)||(41971391-41971464)
chr1 (173-262)||(320672-320761)
chr1 (176-262)||(7434531-7434617)
chr1 (173-262)||(32981008-32981097)
chr1 (185-262)||(41971252-41971329)
chr1 (94-139)||(3829995-3830040)
chr1 (94-139)||(35908599-35908644)
chr1 (17-55)||(3829938-3829976)
chr1 (208-262)||(3830095-3830149)
chr1 (180-262)||(11957308-11957390)
chr1 (173-262)||(15209287-15209374)
chr1 (194-275)||(17875558-17875639)
chr1 (208-262)||(26159365-26159419)
chr1 (95-136)||(30558953-30558994)
chr1 (173-262)||(33490460-33490549)
chr1 (55-96)||(35908549-35908590)
chr1 (95-139)||(26272874-26272918)
chr1 (194-262)||(35948840-35948908)
chr1 (95-139)||(41753138-41753182)
[»] chr4 (66 HSPs)
chr4 (19-259)||(13398527-13398770)
chr4 (17-262)||(44157579-44157832)
chr4 (16-262)||(50204050-50204300)
chr4 (17-262)||(13390415-13390659)
chr4 (17-259)||(33135403-33135656)
chr4 (17-139)||(40530040-40530173)
chr4 (17-138)||(17510319-17510451)
chr4 (17-138)||(28876394-28876526)
chr4 (17-139)||(30076730-30076864)
chr4 (17-139)||(30215825-30215958)
chr4 (17-139)||(42332852-42332985)
chr4 (17-139)||(43142664-43142797)
chr4 (17-137)||(3291978-3292109)
chr4 (17-136)||(25931709-25931839)
chr4 (17-139)||(1818610-1818743)
chr4 (17-137)||(6689318-6689449)
chr4 (17-137)||(35546906-35547037)
chr4 (17-139)||(36381428-36381560)
chr4 (23-139)||(37577711-37577838)
chr4 (21-139)||(10351975-10352105)
chr4 (17-136)||(13013144-13013274)
chr4 (26-137)||(29995089-29995206)
chr4 (17-136)||(47501729-47501859)
chr4 (17-96)||(26438411-26438490)
chr4 (17-96)||(34406416-34406495)
chr4 (17-96)||(43356860-43356939)
chr4 (174-258)||(25931865-25931949)
chr4 (177-262)||(26438244-26438329)
chr4 (17-139)||(7769517-7769644)
chr4 (174-262)||(40530197-40530285)
chr4 (179-262)||(17510213-17510296)
chr4 (177-262)||(20130356-20130441)
chr4 (51-139)||(29319432-29319531)
chr4 (177-262)||(34406249-34406334)
chr4 (177-262)||(43357022-43357107)
chr4 (33-96)||(30110931-30110995)
chr4 (21-86)||(48130938-48131004)
chr4 (177-262)||(13013306-13013391)
chr4 (173-262)||(36381306-36381395)
chr4 (179-261)||(29319326-29319408)
chr4 (173-271)||(48131092-48131190)
chr4 (177-262)||(47501890-47501975)
chr4 (30-136)||(20130197-20130314)
chr4 (53-96)||(48131003-48131046)
chr4 (97-139)||(26449739-26449781)
chr4 (180-250)||(37577885-37577955)
chr4 (94-139)||(6236502-6236547)
chr4 (189-266)||(26449819-26449896)
chr4 (179-262)||(10351874-10351955)
chr4 (179-262)||(29994964-29995047)
chr4 (17-55)||(26449679-26449717)
chr4 (17-55)||(48990257-48990295)
chr4 (95-136)||(8897874-8897915)
chr4 (94-139)||(42843895-42843940)
chr4 (173-237)||(6236579-6236643)
chr4 (223-262)||(6689220-6689259)
chr4 (223-262)||(7769705-7769744)
chr4 (17-48)||(25931665-25931696)
chr4 (223-262)||(43142567-43142606)
chr4 (173-235)||(12211116-12211178)
chr4 (53-86)||(9070477-9070510)
chr4 (53-90)||(29132149-29132186)
chr4 (41-90)||(31854203-31854251)
chr4 (53-89)||(20628664-20628700)
chr4 (194-262)||(37236121-37236189)
chr4 (95-139)||(55464605-55464649)
[»] chr5 (38 HSPs)
chr5 (17-262)||(19986399-19986656)
chr5 (17-262)||(39656487-39656739)
chr5 (21-139)||(16155850-16155979)
chr5 (17-139)||(16332979-16333112)
chr5 (17-139)||(10036862-10036995)
chr5 (17-260)||(31500681-31500929)
chr5 (17-136)||(36292702-36292832)
chr5 (17-139)||(13818932-13819065)
chr5 (17-137)||(12277936-12278067)
chr5 (17-136)||(39435652-39435785)
chr5 (18-136)||(17331078-17331207)
chr5 (17-137)||(31681321-31681452)
chr5 (17-137)||(33431275-33431406)
chr5 (17-139)||(36292309-36292444)
chr5 (17-136)||(26282399-26282529)
chr5 (32-139)||(1775457-1775575)
chr5 (173-262)||(13819086-13819175)
chr5 (174-260)||(1775337-1775423)
chr5 (25-137)||(28801837-28801961)
chr5 (17-136)||(43069797-43069931)
chr5 (179-262)||(39435828-39435911)
chr5 (180-265)||(10037029-10037114)
chr5 (21-93)||(15959080-15959153)
chr5 (177-262)||(16332872-16332957)
chr5 (177-262)||(26282285-26282370)
chr5 (177-262)||(36292577-36292662)
chr5 (55-139)||(37255625-37255720)
chr5 (31-90)||(192764-192823)
chr5 (177-271)||(43069977-43070069)
chr5 (173-262)||(16156017-16156109)
chr5 (173-259)||(28801956-28802042)
chr5 (223-262)||(31681518-31681557)
chr5 (223-262)||(33431472-33431511)
chr5 (194-262)||(204096-204164)
chr5 (179-262)||(36292492-36292573)
chr5 (223-262)||(17330974-17331013)
chr5 (94-139)||(1280766-1280811)
chr5 (194-262)||(2985847-2985915)
[»] chr6 (12 HSPs)
chr6 (17-139)||(34947905-34948038)
chr6 (15-139)||(29744222-29744358)
chr6 (17-139)||(33228430-33228564)
chr6 (17-137)||(28997684-28997815)
chr6 (17-136)||(399573-399703)
chr6 (17-136)||(13838754-13838884)
chr6 (21-139)||(31028033-31028163)
chr6 (176-261)||(34947798-34947883)
chr6 (178-262)||(399731-399815)
chr6 (17-96)||(34253087-34253164)
chr6 (194-258)||(24074658-24074722)
chr6 (179-262)||(29744393-29744474)
[»] chr2 (44 HSPs)
chr2 (17-250)||(8058320-8058555)
chr2 (17-136)||(17444117-17444247)
chr2 (17-139)||(16406084-16406217)
chr2 (17-139)||(18982499-18982632)
chr2 (17-139)||(42442940-42443073)
chr2 (15-139)||(771687-771822)
chr2 (17-139)||(32126267-32126400)
chr2 (23-139)||(31580815-31580942)
chr2 (17-139)||(35963645-35963777)
chr2 (17-137)||(45419537-45419668)
chr2 (17-136)||(6402885-6403015)
chr2 (17-96)||(41250765-41250844)
chr2 (17-137)||(12755937-12756050)
chr2 (97-258)||(17090231-17090390)
chr2 (16-99)||(7071659-7071742)
chr2 (97-250)||(17035728-17035882)
chr2 (17-139)||(2286862-2286988)
chr2 (180-262)||(41250592-41250674)
chr2 (177-262)||(6402772-6402857)
chr2 (177-262)||(17443991-17444076)
chr2 (173-262)||(26238696-26238785)
chr2 (176-262)||(31580691-31580777)
chr2 (189-262)||(26161702-26161775)
chr2 (173-262)||(32126185-32126274)
chr2 (21-139)||(26238573-26238703)
chr2 (195-262)||(772269-772336)
chr2 (180-262)||(16406240-16406322)
chr2 (180-262)||(18982657-18982739)
chr2 (173-262)||(4554299-4554388)
chr2 (173-262)||(42443095-42443184)
chr2 (194-262)||(26655690-26655758)
chr2 (185-260)||(7071528-7071603)
chr2 (94-139)||(26656286-26656331)
chr2 (94-137)||(26161814-26161857)
chr2 (177-262)||(35963799-35963884)
chr2 (187-262)||(2287036-2287111)
chr2 (17-48)||(26161883-26161914)
chr2 (95-134)||(28841257-28841296)
chr2 (223-262)||(44084136-44084175)
chr2 (223-262)||(45419734-45419773)
chr2 (173-235)||(45122217-45122279)
chr2 (53-86)||(2043327-2043360)
chr2 (53-90)||(17372967-17373004)
chr2 (53-90)||(18829889-18829926)
[»] chr8 (37 HSPs)
chr8 (17-139)||(36409439-36409572)
chr8 (15-137)||(4404961-4405094)
chr8 (17-139)||(34135884-34136017)
chr8 (17-162)||(7278981-7279138)
chr8 (17-93)||(9878175-9878251)
chr8 (21-139)||(40469946-40470076)
chr8 (17-139)||(16787104-16787237)
chr8 (17-133)||(3647876-3648003)
chr8 (17-136)||(24019472-24019602)
chr8 (17-136)||(28524154-28524284)
chr8 (17-136)||(39915470-39915600)
chr8 (25-139)||(29727463-29727588)
chr8 (17-136)||(23403023-23403153)
chr8 (20-136)||(15839231-15839362)
chr8 (177-261)||(29727350-29727434)
chr8 (173-260)||(40469866-40469953)
chr8 (176-262)||(27046929-27047015)
chr8 (177-262)||(28524312-28524397)
chr8 (177-262)||(29632502-29632587)
chr8 (25-136)||(3436196-3436319)
chr8 (177-262)||(24019359-24019444)
chr8 (94-139)||(27046855-27046900)
chr8 (177-262)||(39915628-39915713)
chr8 (94-136)||(42231949-42231991)
chr8 (175-260)||(3436318-3436403)
chr8 (223-262)||(34135787-34135826)
chr8 (173-255)||(3647754-3647835)
chr8 (173-262)||(42232015-42232104)
chr8 (95-139)||(21958698-21958742)
chr8 (223-262)||(16787004-16787043)
chr8 (179-262)||(23403188-23403271)
chr8 (173-216)||(42447147-42447190)
chr8 (17-55)||(42231892-42231930)
chr8 (95-139)||(32343002-32343046)
chr8 (95-139)||(32355489-32355533)
chr8 (95-139)||(32359608-32359652)
chr8 (95-139)||(32372139-32372183)
[»] chr3 (27 HSPs)
chr3 (17-136)||(19391102-19391231)
chr3 (17-137)||(45183935-45184066)
chr3 (17-139)||(11017349-11017482)
chr3 (17-139)||(40080820-40080953)
chr3 (17-132)||(34083207-34083333)
chr3 (22-137)||(35514956-35515082)
chr3 (17-136)||(6268503-6268633)
chr3 (17-96)||(22967576-22967655)
chr3 (17-96)||(33041905-33041984)
chr3 (17-96)||(39772746-39772825)
chr3 (17-139)||(19564595-19564729)
chr3 (25-137)||(6929975-6930098)
chr3 (173-262)||(1185505-1185595)
chr3 (17-96)||(45336812-45336892)
chr3 (25-79)||(6502718-6502772)
chr3 (41-96)||(1185642-1185698)
chr3 (179-262)||(34083079-34083162)
chr3 (177-262)||(39772906-39772991)
chr3 (21-96)||(5136252-5136327)
chr3 (186-262)||(22967399-22967475)
chr3 (177-262)||(40080714-40080798)
chr3 (94-138)||(27936194-27936238)
chr3 (174-259)||(27936261-27936346)
chr3 (94-139)||(43137311-43137356)
chr3 (41-90)||(16094289-16094338)
chr3 (94-139)||(37381814-37381859)
chr3 (95-139)||(22934744-22934788)
[»] scaffold0154 (2 HSPs)
scaffold0154 (17-139)||(32170-32303)
scaffold0154 (173-262)||(32296-32384)
[»] scaffold0069 (2 HSPs)
scaffold0069 (17-136)||(18515-18644)
scaffold0069 (177-262)||(18684-18769)
[»] scaffold0002 (2 HSPs)
scaffold0002 (17-136)||(479538-479668)
scaffold0002 (178-262)||(479422-479506)
[»] scaffold0178 (2 HSPs)
scaffold0178 (199-262)||(21948-22011)
scaffold0178 (199-262)||(27450-27513)
[»] scaffold0015 (1 HSPs)
scaffold0015 (95-139)||(214106-214150)
[»] scaffold0170 (1 HSPs)
scaffold0170 (95-136)||(9262-9303)


Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 265 - 515
Target Start/End: Complemental strand, 30216760 - 30216511
Alignment:
Q  265 tatatatatatccttaatgttgctgacagaattctgtttgttggctgtatttcctttttgcatgtcataagacctataatcttacaaaacccgcctgctt 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30216760 tatatatatatccttaatgttgctgacagaattctgtttgttggctgtatttcctttttgcatgtcataagacctataatcttacaaaacccgcctgctt 30216661  T
Q  365 gtctactgcaaactgtggttttcttggtcacatcatgtgttatgattgtgttatggttggttctgatttctgttgttgatgttgtaattgttttcattgt 464  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30216660 gtctactgcaaactgtggttttcttggtcacatcatgtgttgtgattgtgttatggttggttctgatttctgttgttgatgttgtaattgttttcattgt 30216561  T
Q  465 ttggatggtggctatatcaactgttgttgtacaaagatgggatcactttac 515  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  30216560 ttggatggtggctatatcaactg-tgttgtacaaagatgggatccctttac 30216511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 5556417 - 5556550
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  5556417 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtactt 5556516  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||| |||||||||||    
T  5556517 ttgttgacaaaatgataaacctattttatttcga 5556550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7003581 - 7003714
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  7003581 atggtcagaatatatgttatttaattatagggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcatattttaaattgtactt 7003680  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  7003681 ttgttgacaaaatgataaacctcttttatttcga 7003714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7049452 - 7049585
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  7049452 atggtcagaatatatgttatttaattatagggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcatattttaaattgtactt 7049551  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  7049552 ttgttgacaaaatgataaacctcttttatttcga 7049585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36631771 - 36631904
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||| ||||    
T  36631771 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgcactt 36631870  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  36631871 ttgttgacaaaatgataaacctcttttatttcga 36631904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 36659123 - 36659370
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtca----atttcaattaataaattgtacttttgttga 112  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    | | | |||  |||||||||||||| ||||    
T  36659123 atggtcagaatacatgttatttaattacagggccaattgtgagacttcacgtatattacatggtcataataatcctatt-ttaaattgtacttttattga 36659221  T
Q  113 caaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtcatatgtg 212  Q
    |||||||||||||||||||||||| ||       ||||||||||||||||          | ||||||||| |||| ||| ||||||||||||| |||||    
T  36659222 caaaatgataaacctcttttattttgatatttttaattaaaattaaaatt--aaaaaaaatgtttcgatttatgaccgttgatatattatgtcacatgtg 36659319  T
Q  213 aattcacga-gaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||  |||  ||||||||||||||| || ||| ||||| |||||||||||    
T  36659320 aattttcgataaaattttttgcccggactacatcaatttcctggctccgcc 36659370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 26625699 - 26625832
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaat-----------aaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||           |||||||||||    
T  26625699 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctatttgaaattgtactt 26625798  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||||||||||||||||||||    
T  26625799 ttattgacaaaatgataaacctcttttatttcga 26625832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 3113334 - 3113201
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| | |||||||||||||||           ||||||||||||    
T  3113334 atggtcaaaatacatgttatttgattacagggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaaattgtactt 3113235  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  3113234 ttgttgacaaaatgataaacctcttttatttcga 3113201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 38637594 - 38637461
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||           ||||||||||||    
T  38637594 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttatttaataatcctattttaaattgtactt 38637495  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||||||||||||||||||||    
T  38637494 ttattgacaaaatgataaacctcttttatttcga 38637461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 34468542 - 34468415
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgt 109  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||           ||||||||||||||||    
T  34468542 tcagaatacatgttatttaattacaaggtcaattttcagacttcacgtatattacgtgatcaatttcaattaataaccctattttaaattgtacttttgt 34468443  T
Q  110 tgacaaaatgataaacctcttttatttc 137  Q
    ||||||||||||||||||||||||||||    
T  34468442 tgacaaaatgataaacctcttttatttc 34468415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 8866943 - 8866810
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||           ||||||||||||    
T  8866943 atggtcaaaatacatgttatttaattacagagccaattttcagacttcacatatattacgtggtcaattttaattaataatcttattttaaattgtactt 8866844  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||||||||||||||||||||    
T  8866843 ttattgacaaaatgataaacctcttttatttcga 8866810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 8395082 - 8395210
Alignment:
Q  20 gtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||           ||||||| |||||||    
T  8395082 gtcagaatacatgttatttaattacatggtcaattttcagacttcacgtatattgcgtggtcaatttcaattaataaacctattttaaattgcacttttg 8395181  T
Q  109 ttgacaaaatgataaacctcttttatttc 137  Q
    |||||||||||||||||||||||||||||    
T  8395182 ttgacaaaatgataaacctcttttatttc 8395210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 37001451 - 37001320
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||           ||||||||||||    
T  37001451 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattatattgtcaattttaattaataatcctattttaaattgtactt 37001352  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  37001351 ttattgacaaaatgataaacctcttttatttc 37001320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 43183681 - 43183551
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||| ||    
T  43183681 atggtcaaaatacatgttatttaattacatggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 43183582  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    || ||||||||||||||||||||||||||||    
T  43183581 ttattgacaaaatgataaacctcttttattt 43183551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 8395287 - 8395375
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||    
T  8395287 atttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccggcctccataaattttctggctccgcc 8395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 36631938 - 36632026
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||    
T  36631938 atttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccgcc 36632026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 14775804 - 14775677
Alignment:
Q  20 gtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| || | ||||||||||||           |||||||||||||||    
T  14775804 gtcagaatgcatgttatttaattacaggatcaattttcagacttcacgtatattacgtgattaatttcaattaataaccctattttaaattgtacttttg 14775705  T
Q  109 ttgacaaaatgataaacctcttttattt 136  Q
    |||| |||||||||||| || |||||||    
T  14775704 ttgataaaatgataaacttcatttattt 14775677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 15226257 - 15226130
Alignment:
Q  20 gtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| || | ||||||||||||           |||||||||||||||    
T  15226257 gtcagaatgcatgttatttaattacaggatcaattttcagacttcacgtatattacgtgattaatttcaattaataaccctattttaaattgtacttttg 15226158  T
Q  109 ttgacaaaatgataaacctcttttattt 136  Q
    |||| |||||||||||| || |||||||    
T  15226157 ttgataaaatgataaacttcatttattt 15226130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 11019661 - 11019572
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| ||||| |||||||| ||||||||||||| |||||||||   || || | |||||||||||||||||||||||||||||||||||    
T  11019661 tattttgatttatgactgtttatatattatgtcacatgtgaatttgtgataattgttttgcccgggctccataaattttctggctccgcc 11019572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 14775636 - 14775551
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||||| || ||||||||||||||||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  14775636 tcgatttatgactatttatatattatgtcatatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 14775551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 15226089 - 15226004
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||||| || ||||||||||||||||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  15226089 tcgatttatgactatttatatattatgtcatatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 15226004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 34468420 - 34468331
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||| |||| |||||||| ||||||||| ||| ||||||||| | ||  ||||||||||||||||||||||||||| |||||||||||    
T  34468420 tatttcaatttatgactgtttatatattatatcacatgtgaatttaggattaattttttgcccgggctccataaatttcctggctccgcc 34468331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 3113179 - 3113093
Alignment:
Q  176 ttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||| |||| ||||||||| ||| ||||||||| ||||  ||||||| |||||  ||||||||||||||||||||||||    
T  3113179 ttcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgaactccataaattttctggctccgcc 3113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 33686575 - 33686619
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcg 138  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  33686575 taaattgtacttttgttgacaaaatgataaacctattttatttcg 33686619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 33686640 - 33686727
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    ||||| ||||| ||| |||| |||| |||| |||||||||||||  ||| |||||||||| |||  ||||||||||||||| ||||||    
T  33686640 tatttggatttatgattgtttatatgttatctcatatgtgaatttgcgataaattttttgtccgaactccataaattttctagctccg 33686727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 19400226 - 19400294
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| || ||||||  ||| ||| ||||||||| ||||| ||||| ||||||||||||||    
T  19400226 atatattatgtcacatatgaatttgcgataaactttttgcccaggctctataaaatttctggctccgcc 19400294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 21420098 - 21420062
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaa 89  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21420098 ttttcagacttcacgtatattacaaggtcaatttcaa 21420062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 544
Target Start/End: Complemental strand, 30216483 - 30216452
Alignment:
Q  513 tacatgcaatgacttggttcttcagatcaaag 544  Q
    ||||||||||||||||||||||||||||||||    
T  30216483 tacatgcaatgacttggttcttcagatcaaag 30216452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 7003747 - 7003832
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| |||| ||||||||| ||| |||||||||   ||    ||||||||||||||||||||||||| ||| |||||||    
T  7003747 tcgatttatgaatgttgatatattatatcacatgtgaatttgagaatttttttttgcccgggctccataaatttcctgactccgcc 7003832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 7049618 - 7049703
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| |||| ||||||||| ||| |||||||||   ||    ||||||||||||||||||||||||| ||| |||||||    
T  7049618 tcgatttatgaatgttgatatattatatcacatgtgaatttgagaatttttttttgcccgggctccataaatttcctgactccgcc 7049703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 10224077 - 10224121
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| |||| ||||||||||||  |||||||||||||||||    
T  10224077 aaattgtatttttattgacaaaatgaagaacctcttttatttcga 10224121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 26493642 - 26493574
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| ||||||||| |||| |||||||| ||||   ||| |||||||| ||| |||||||    
T  26493642 atatattatgtcacatgtgaatttacgataaatttttcgcccaaactctataaatttactgactccgcc 26493574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 45197829 - 45197873
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||| |||||||  || ||||||||||||||    
T  45197829 aaattgtacttttgttgaaaaaatgacgaatctcttttatttcga 45197873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 6e-91; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 278 - 515
Target Start/End: Original strand, 43624179 - 43624416
Alignment:
Q  278 ttaatgttgctgacagaattctgtttgttggctgtatttcctttttgcatgtcataagacctataatcttacaaaacccgcctgcttgtctactgcaaac 377  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  43624179 ttaatgttgctgacagaattctgtttgttgactgtatttgccttttgcatatcataagacctgtaatcttacaaatcccgcctgcttgtctaatgcaaac 43624278  T
Q  378 tgtggttttcttggtcacatcatgtgttatgattgtgttatggttggttctgatttctgttgttgatgttgtaattgttttcattgtttggatggtggct 477  Q
    |||| ||||||||||||||||||||||||||  ||||| || | |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  43624279 tgtgattttcttggtcacatcatgtgttatgtgtgtgtcatcgatggttctgatttctgttgttgaagctgtaattgttttcattctttggatggtggct 43624378  T
Q  478 atatcaactgttgttgtacaaagatgggatcactttac 515  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43624379 atatcaactgctgttgtacaaagatgggatcactttac 43624416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 278 - 515
Target Start/End: Complemental strand, 43994832 - 43994595
Alignment:
Q  278 ttaatgttgctgacagaattctgtttgttggctgtatttcctttttgcatgtcataagacctataatcttacaaaacccgcctgcttgtctactgcaaac 377  Q
    |||||||| ||||||||||||||||||||| |||||||| | | |||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  43994832 ttaatgtttctgacagaattctgtttgttgactgtatttgcatgttgcatatcataagacctgtaatcttacaaatcccgcctgcttgtctaatgcaaac 43994733  T
Q  378 tgtggttttcttggtcacatcatgtgttatgattgtgttatggttggttctgatttctgttgttgatgttgtaattgttttcattgtttggatggtggct 477  Q
    |||| ||||||||||||||||||||||| ||  ||||| || | |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  43994732 tgtgattttcttggtcacatcatgtgttgtgtgtgtgtcatcgatggttctgatttctgttgttgaagctgtaattgttttcattctttggatggtggct 43994633  T
Q  478 atatcaactgttgttgtacaaagatgggatcactttac 515  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43994632 atatcaactgttgttgtacaaagatgggatcactttac 43994595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 17446248 - 17446501
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           ||||||| ||||    
T  17446248 atggtcagaatacatgttatttaattacatggccaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgcactt 17446347  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
    ||||||||||||||||||||||||||||||| ||       | ||||||||||||||          | | ||||||| |||||||| ||||||||||||    
T  17446348 ttgttgacaaaatgataaacctcttttattttgatttttttagttaaaattaaaatt---aaaaaaatgtatcgatttatgactgttgatatattatgtc 17446444  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    | |||||||||  ||| ||||| ||||| |||||||||||||||| ||| |||||||    
T  17446445 acatgtgaatttgcgataaattatttgctcgggctccataaatttcctgactccgcc 17446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 23313949 - 23314082
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  23313949 atggtcagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtactt 23314048  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  23314049 ttgttgacaaaatgataaacctcttttatttcga 23314082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 11957570 - 11957437
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||           ||||||||||||    
T  11957570 atggtcagaatacatgttatttaattgcagggttaattttcagacttcacatatattacatggtcaatttcaattaataatcctattttaaattgtactt 11957471  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  11957470 ttgttgacaaaatgataaacctcttttatttcga 11957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 15209497 - 15209367
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  15209497 tcagaatacatgttatttaattacagggtcaatttttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtacttttg 15209398  T
Q  109 ttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||| |||||||||||||||||    
T  15209397 ttgacaaaatgatgaacctcttttatttcga 15209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 32981270 - 32981139
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||   ||||||||||||||||           ||||||||||||    
T  32981270 atggtcagaatacatgttatttaattacatggtcaattttcagacatcacgtatattaggcggtcaatttcaattaataaccctattttaaattgtactt 32981171  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    ||||||||||||||||||||||||||||||||    
T  32981170 ttgttgacaaaatgataaacctcttttatttc 32981139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7434375 - 7434510
Alignment:
Q  17 atggtcagaatacat--gttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtac 103  Q
    |||||||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |||||||||||||||           ||||||| ||    
T  7434375 atggtcagaatacatatgttatttaattacatggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaaattgcac 7434474  T
Q  104 ttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  7434475 ttttgttgacaaaatgataaacctcttttatttcga 7434510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 42310153 - 42309902
Alignment:
Q  17 atggtcagaatacatgttatttaattacag---ggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgta 102  Q
    ||||||||||||||||||||||||||||||   || |||||||||||||||| ||||||||| |||||||||||||||||           |||||||||    
T  42310153 atggtcagaatacatgttatttaattacagcagggtcaattttcagacttcatgtatattacgtggtcaatttcaattaataatcatattttaaattgta 42310054  T
Q  103 cttttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattat 202  Q
    |||||||| |||||||||||||| ||||||||||| |        |  ||||  ||||||          | |||| |||| |||||||| |||||||||    
T  42310053 cttttgtttacaaaatgataaacatcttttatttcaattttttttaggaaaaaaaaaatt--------tttctttcaatttatgactgtttatatattat 42309962  T
Q  203 gtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| ||||||||| ||||  ||||||||||||  ||||||||||||| |||||||||||    
T  42309961 gtcacatgtgaatttacgattaattttttgcccaagctccataaatttcctggctccgcc 42309902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 33490340 - 33490414
Alignment:
Q  23 agaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||    
T  33490340 agaatacatgttatttaattacatgggcaatttttcatacttcacgtatattacatggtcaatttcaattaataa 33490414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 41971464 - 41971391
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaa 93  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  41971464 tcagaatacatgttatttaattacagggtcaatttttcaggcttcacgtatattatatggtcaatttcaattaa 41971391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 320761 - 320672
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||| | ||||||||||||| |||||||||  ||| | | |||||||||||||||||||||||| |||||||||||    
T  320761 tatttcgatttatgactgattatatattatgtcacatgtgaatttgcgatacaatttttgcccgggctccataaatttcctggctccgcc 320672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 7434531 - 7434617
Alignment:
Q  176 ttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||| |||| ||||||||| ||| ||||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  7434531 ttcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccgcc 7434617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 32981097 - 32981008
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||||| || ||||||||||||| ||||||||| ||||  |||||||||| ||| |||||||||||| |||| ||||||    
T  32981097 tatttcgatttatgactatttatatattatgtcacatgtgaatttacgattaattttttgctcggactccataaatttcctggttccgcc 32981008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 41971329 - 41971252
Alignment:
Q  185 tgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||| |||||||||  ||| |||||||||| | || |||||||||||| |||||||||||    
T  41971329 tgactgtttatatattatgtcacatgtgaatttgcgataaattttttgtctggactccataaatttcctggctccgcc 41971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 3829995 - 3830040
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  3829995 taaattgtacttttgttgacaaaattataaacctattttatttcga 3830040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 35908599 - 35908644
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  35908599 taaattgtatttttattgacaaaatgataaacctcttttatttcga 35908644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 3829938 - 3829976
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattt 55  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  3829938 atggtcagaatacatgttatttaattacagggtcaattt 3829976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 3830095 - 3830149
Alignment:
Q  208 atgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||||  ||| |||||||||||||| ||||||||||||| |||||||||||    
T  3830095 atgtgaatttgcgataaattttttgcccgagctccataaatttcctggctccgcc 3830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 11957390 - 11957308
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| |||||||| |||||||||||||  ||| ||||  ||| |||||||||||||   || |||||||||||||||||||||    
T  11957390 atttatgactgttgatatattatgtcacgtgttaatttgcgataaattttttgcccaaacttcataaattttctggctccgcc 11957308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 15209374 - 15209287
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||||| |  ||||||||||||| |||||||||  ||  ||| ||||||| ||||||||||||||||  ||||||||||    
T  15209374 tatttcgatttatgacttt--atatattatgtcacatgtgaatttgcgttaaaatttttgctcgggctccataaatttcttggctccgcc 15209287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 17875558 - 17875639
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcccctatatatatat 275  Q
    ||||||||||||| |||||||||  ||| ||||||||||||| | ||| ||||| ||| |||||||||| |  |||||||||    
T  17875558 atatattatgtcacatgtgaatttgcgataaattttttgcccagactctataaaatttatggctccgccgcggtatatatat 17875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 26159365 - 26159419
Alignment:
Q  208 atgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  26159365 atgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 26159419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 30558994 - 30558953
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  30558994 aaattgtacttttattgacaaaatgatgagcctcttttattt 30558953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 33490460 - 33490549
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||||| || ||||||||||||  |||||||||  | | ||||| ||||||||  | |||||||||| || ||||||||    
T  33490460 tatttcgatttatgactatttatatattatgtcgcatgtgaatttgctataaattatttgcccgaacaccataaatttcctagctccgcc 33490549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 35908549 - 35908590
Alignment:
Q  55 ttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||||||| |||||||||| |||||||| |||||||||    
T  35908549 ttcagacttcacatatattacattgtcaattttaattaataa 35908590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 26272918 - 26272874
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||||    
T  26272918 aaattgtacttttgttgacaaaaagacgaaccttttttatttcga 26272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 35948908 - 35948840
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| ||||||||| |||| |||||||| |||   |||| ||||||||| ||| ||||||    
T  35948908 atatattatgtcacatgtgaatttacgataaatttttcgcctatgctctataaattttttggttccgcc 35948840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 41753138 - 41753182
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| ||||||||  |||||||| |||||||||||||||||    
T  41753138 aaattgtatttttgttgtaaaaatgatgaacctcttttatttcga 41753182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 13398770 - 13398527
Alignment:
Q  19 ggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactttt 107  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||    
T  13398770 ggtccgaatacatgttatttaattacagagccaattttcagacttcacgtatattacatggtcaatttcaattgataatcctattttaaattgtactttt 13398671  T
Q  108 gttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtcat 207  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||            ||||||||||| |||||||| |||||||||||||     
T  13398670 gttgacaaaatgataaacctcttttatttcgatttttttaattaaaattaaaa--------aaaatatttcgatttatgactgttgatatattatgtcac 13398579  T
Q  208 atgtgaattcacgagaaattttttgcccgggctccataaattttctggctcc 259  Q
    ||||||||| |||| ||||||||||||||  || ||||||||| ||||||||    
T  13398578 atgtgaatttacgataaattttttgcccgaacttcataaatttcctggctcc 13398527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 44157579 - 44157832
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||           ||||||||||||    
T  44157579 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgcatattacatgatcaatttcaattaataatcctattttaaattgtactt 44157678  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||          | |||| |||| | |||||| ||||||||||||    
T  44157679 ttgttgacaaaatgataaacctcttttatttcgatttttttaattaaaattaaaatt--aaaaaaaatgtttcaatttataactgttgatatattatgtc 44157776  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    | |||||||||  ||| ||||||||||||| |||||||||||||| ||| |||||||    
T  44157777 acatgtgaatttgcgataaattttttgccc-ggctccataaatttcctgactccgcc 44157832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 50204300 - 50204050
Alignment:
Q  16 tatggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtact 104  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||    
T  50204300 tatggtcagaaaacctgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtact 50204201  T
Q  105 tttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgt 204  Q
    |||||||||||||||||||||||||||||||| ||       ||||||||||||||            | ||||||||| |||||||| |||||||||||    
T  50204200 tttgttgacaaaatgataaacctcttttattttgatttttttaattaaaattaaaa-------aataatgtttcgatttatgactgttgatatattatgt 50204108  T
Q  205 catatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    || |||| ||||  ||| ||||||||| || | ||||||||||||| |||||||||||    
T  50204107 cacatgtaaatttgcgataaatttttttcctgagctccataaatttcctggctccgcc 50204050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 13390659 - 13390415
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||           ||||||||||||    
T  13390659 atggtcagaatacatgttatttaattacagggccaattttcaaacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtactt 13390560  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
    ||||||| ||||||||||||||||||||||||||       ||||||||  |||||           ||||| ||||| |||||||| ||||||||||||    
T  13390559 ttgttgataaaatgataaacctcttttatttcgatttttttaattaaaa--aaaat----------atattttgatttatgactgttgatatattatgtc 13390472  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    | ||||||||| ||||  ||||||||||| | ||| ||||||||| |||||||||||    
T  13390471 acatgtgaatttacgattaattttttgccagagcttcataaatttcctggctccgcc 13390415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 33135656 - 33135403
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||           ||||||||||||    
T  33135656 atggtcaaaatacatgttatttaattacatgaccaattttcagacttcacatatattacatggtcaatttcaattaataatcctattttaaattgtactt 33135557  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaatt-nnnnnnnnnntatttcgatttttgactgttaatatattatgt 204  Q
    |||||||||||||||||||||||||||||||| |       ||||||||||||||||           ||||| ||||| |||||||| |||||||||||    
T  33135556 ttgttgacaaaatgataaacctcttttatttc-aattttttaattaaaattaaaattaaaaaaaaaaatattttgatttatgactgttgatatattatgt 33135458  T
Q  205 catatgtgaattcacgagaaattttttgcccgggctccataaattttctggctcc 259  Q
    || |||||||||   || |||||||||| ||| ||||||||||||||||||||||    
T  33135457 cacatgtgaatttgtgataaattttttgtccgagctccataaattttctggctcc 33135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 40530040 - 40530173
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||| ||||    
T  40530040 atggtcataatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgcactt 40530139  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  40530140 ttgttgacaaaatgataaacctcttttatttcga 40530173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 17510451 - 17510319
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  17510451 atggtcagaatacatattatttaattacaaggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccttattttaaattgtactt 17510352  T
Q  106 ttgttgacaaaatgataaacctcttttatttcg 138  Q
    |||||||||||||||||||||||||||||||||    
T  17510351 ttgttgacaaaatgataaacctcttttatttcg 17510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 28876526 - 28876394
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  28876526 atggtcataatatatgttatttaattacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtactt 28876427  T
Q  106 ttgttgacaaaatgataaacctcttttatttcg 138  Q
    |||||||||||||||||||||||||||||||||    
T  28876426 ttgttgacaaaatgataaacctcttttatttcg 28876394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 30076864 - 30076730
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtact 104  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||           |||||||||||    
T  30076864 atggtcagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtact 30076765  T
Q  105 tttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||||||||||||||||    
T  30076764 tttgttgacaaaatgataaacctcttttatttcga 30076730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 30215958 - 30215825
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaat-----------aaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||           |||||||||||    
T  30215958 atggtcaaaatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctatttgaaattgtactt 30215859  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||||||||||||||||||||    
T  30215858 ttattgacaaaatgataaacctcttttatttcga 30215825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 42332985 - 42332852
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||||||    
T  42332985 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtactt 42332886  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||| ||||||||||||||||||||||    
T  42332885 ttattgacaaattgataaacctcttttatttcga 42332852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 43142797 - 43142664
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||||||    
T  43142797 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtactt 43142698  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||| ||||||||||||||||||||||    
T  43142697 ttattgacaaattgataaacctcttttatttcga 43142664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 3292109 - 3291978
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||| ||    
T  3292109 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 3292010  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  3292009 ttattgacaaaatgataaacctcttttatttc 3291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 25931709 - 25931839
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||           ||||||| ||||    
T  25931709 atggtcagaatacatgttatttaattacagggtcaattttcagacttcatgtatattacgtggtcaatttcaattaataaccctattttaaattgcactt 25931808  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||| |||||||||||||||||||||||||    
T  25931809 ttgttaacaaaatgataaacctcttttattt 25931839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 1818610 - 1818743
Alignment:
Q  17 atggtcagaatacatgttatttaat-tacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa----------taaattgtactt 105  Q
    ||||||||||||||||| |||| || |||| ||  |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  1818610 atggtcagaatacatgtgattttatatacaaggttaattttcagacttcacgtatattacatggtcaatttcaattaataacctattttaaattgtactt 1818709  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  1818710 ttgttgacaaaatgataaacctcttttatttcga 1818743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 6689449 - 6689318
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||           ||||||||| ||    
T  6689449 atggtcaaaatacatgttatttaattacagggccaattttcagactttacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 6689350  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  6689349 ttattgacaaaatgataaacctcttttatttc 6689318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 35546906 - 35547037
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||| ||    
T  35546906 atggtcaaaatacatgttatttaattacatggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 35547005  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  35547006 ttattgacaaaatgataaacctcttttatttc 35547037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 36381560 - 36381428
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||| ||||||           ||||||| ||||    
T  36381560 atggtcagaatacatgttatttaattacaagtc-aattttcagacttcacgtatattacgtggtcaattttaattaataaccctattttaaattgcactt 36381462  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  36381461 ttgttgacaaaatgataaacctcttttatttcga 36381428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 37577711 - 37577838
Alignment:
Q  23 agaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttg 111  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||| ||||||||||||||           ||||||||| ||||||||    
T  37577711 agaatacatgttatttaattacaaggttaattttcagacttcatgtatattacatgatcaatttcaattaataatcctaatttaaattgtatttttgttg 37577810  T
Q  112 acaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||    
T  37577811 acaaaatgataaacctcttttatttcga 37577838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 10352105 - 10351975
Alignment:
Q  21 tcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    ||||||||||||  |||||||| ||| || |||||||||||||||| |||||||||||||||||||||||||||           |||||||||||||||    
T  10352105 tcagaatacatgcgatttaatttacaaggtcaattttcagacttcatgtatattacatggtcaatttcaattaataaccctattttaaattgtacttttg 10352006  T
Q  109 ttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||||||||||||    
T  10352005 ttgacaaaatgataaacctcttttatttcga 10351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 13013144 - 13013274
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  13013144 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 13013243  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  13013244 ttgttgataaaatgataaacttcatttattt 13013274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 29995206 - 29995089
Alignment:
Q  26 atacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa----attgt-acttttgttgacaaaatg 119  Q
    |||||||| |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||    ||| | | ||||||||||||||||    
T  29995206 atacatgtgatttaatttacggggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattttgttgacaaaatg 29995107  T
Q  120 ataaacctcttttatttc 137  Q
    ||||||||||||||||||    
T  29995106 ataaacctcttttatttc 29995089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 47501729 - 47501859
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  47501729 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 47501828  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  47501829 ttgttgataaaatgataaacttcatttattt 47501859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 26438490 - 26438411
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  26438490 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataa 26438411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 34406495 - 34406416
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  34406495 atggtcagaatacatattatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataa 34406416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 43356860 - 43356939
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  43356860 atggtcagaatacatattatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataa 43356939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 25931865 - 25931949
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctc 258  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||| ||||||    
T  25931865 atttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaattttttggctc 25931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 26438329 - 26438244
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||| |||||||||||||| |||||||||||    
T  26438329 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccaggctccataaatttcctggctccgcc 26438244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7769517 - 7769644
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa-----------attgtactt 105  Q
    ||||||| ||||||||||||||||||||| ||||||||||      |||| ||||||||||||||||||| |||||||||           |||||||||    
T  7769517 atggtcaaaatacatgttatttaattacatggccaatttt------tcacatatattacatggtcaattttaattaataattctattttaaattgtactt 7769610  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||||||||||||||||||||    
T  7769611 ttattgacaaaatgataaacctcttttatttcga 7769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 40530197 - 40530285
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||||||  ||||||||||||||| |||||||||||    
T  40530197 atttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgctagggctccataaatttcctggctccgcc 40530285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 17510296 - 17510213
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||||||||| ||||||||||||| |||||||||||    
T  17510296 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgtgctccataaatttcctggctccgcc 17510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 20130356 - 20130441
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  20130356 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 20130441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 29319531 - 29319432
Alignment:
Q  51 aattttcagacttcacgtatattacatggtcaatttcaattaataa-----------attgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  29319531 aattttcagacttcaggtatattacgttgtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctcttttatttcga 29319432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 34406334 - 34406249
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  34406334 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 34406249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 43357022 - 43357107
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  43357022 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 43357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 30110931 - 30110995
Alignment:
Q  33 ttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  30110931 ttatttaattacagggtcaatttttcagacttcacgtatattacatggtcaatttcaatcaataa 30110995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 48130938 - 48131004
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaattt 86  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||    
T  48130938 tcagaatacatgttatttaattacatggtcaatttttcagacttcgcgtatattacatggtcaattt 48131004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 13013306 - 13013391
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  13013306 tcgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 13013391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 36381395 - 36381306
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| || |  ||||||||| | || |||||||||||| |||||||||||    
T  36381395 tatttcgatttatgactgtttatatattatgtcacatgtgaatttacaattaattttttgtctggtctccataaatttcctggctccgcc 36381306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 29319408 - 29319326
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgc 261  Q
    ||||| ||| |||| ||||||||| ||| ||||||||| ||||  ||||||| ||||||||||||||||||| ||||||||||    
T  29319408 gatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccgc 29319326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 48131092 - 48131190
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcccctatatat 271  Q
    ||||||||||| ||| |||| ||||||||||||| |||| ||||  ||| || |||||||||| | |||||||||||| ||||||||||| ||| ||||    
T  48131092 tatttcgatttatgaatgtttatatattatgtcacatgttaatttgcgataatttttttgcccagactccataaatttcctggctccgccactagatat 48131190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 47501890 - 47501975
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| |||| ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  47501890 tcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 47501975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 20130197 - 20130314
Alignment:
Q  30 atgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttgacaaaat 118  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||| | || ||||| ||||||           ||||||||||||||||||| |||||    
T  20130197 atgtcatttaactacagggtcaattttcagacttcacgtatattacgtagttaatttaaattaataaccctattttaaattgtacttttgttgataaaat 20130296  T
Q  119 gataaacctcttttattt 136  Q
    ||||||| || |||||||    
T  20130297 gataaacttcatttattt 20130314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 48131003 - 48131046
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  48131003 ttttcagacttaacgtatattacatggtcaatttcaattaataa 48131046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 26449739 - 26449781
Alignment:
Q  97 attgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  26449739 attgtacttttgttgacaaaatgataaacctattttatttcga 26449781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 37577885 - 37577955
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattt 250  Q
    |||| ||| |||| |||||||||||||||||||||||  ||| ||||||||||||||  ||||||||||||    
T  37577885 atttatgattgtttatatattatgtcatatgtgaatttgcgataaattttttgcccgaactccataaattt 37577955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 6236502 - 6236547
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  6236502 taaattgtatttttgttgataaaatgataaacctcttttatttcga 6236547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 26449819 - 26449896
Alignment:
Q  189 tgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgccccta 266  Q
    |||| ||||||||| ||| |||||||||  ||| |||||||||||||| ||||||||||||| || ||||| ||||||    
T  26449819 tgtttatatattatctcacatgtgaatttgcgataaattttttgcccgagctccataaatttcctagctccaccccta 26449896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 10351955 - 10351874
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| |||||||||  || ||||||| |  ||| |||||||| ||||||||||||||||||| |||||||||||    
T  10351955 gatttatgactgtttatatattat--cacatgtgaagttgcgataaatttttcgcccgggctccataaatttcctggctccgcc 10351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 29995047 - 29994964
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| ||||||||||||| || | |||| ||||  ||||||||  ||||||||||||||||| ||| |||||||    
T  29995047 gatttatgactgtttatatattatgtcacatataaatttacgatcaattttttatccgggctccataaatttcctgactccgcc 29994964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 26449679 - 26449717
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattt 55  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  26449679 atggtcagaatacatgttatttaattacagggtcaattt 26449717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 48990257 - 48990295
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattt 55  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  48990257 atggtcagaatacatgttatttaattacagggtcaattt 48990295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 8897915 - 8897874
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  8897915 aaattgtacttttgttgacaaaatgacgaacctcttttattt 8897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 42843895 - 42843940
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||    
T  42843895 taaattgtacttttgttgaaaaaatgacgaacctcttttatttcga 42843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 6236579 - 6236643
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgg 237  Q
    ||||||||||| |||||||| ||||||||||||| || |||||| ||||  |||||| |||||||    
T  6236579 tatttcgatttatgactgtttatatattatgtcacatatgaatttacgattaattttgtgcccgg 6236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 6689259 - 6689220
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  6689259 aaatttttcgcccgggctccataaatttcctggctccgcc 6689220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 7769705 - 7769744
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  7769705 aaatttttcgcccgggctccataaatttcctggctccgcc 7769744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 25931665 - 25931696
Alignment:
Q  17 atggtcagaatacatgttatttaattacaggg 48  Q
    ||||||||||||||||||||||||||||||||    
T  25931665 atggtcagaatacatgttatttaattacaggg 25931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 43142606 - 43142567
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  43142606 aaatttttcgcccgggctccataaatttcctggctccgcc 43142567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 12211178 - 12211116
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgccc 235  Q
    ||||||||||| ||| | || ||||||||||||| |||||||||  ||| |||||||||||||    
T  12211178 tatttcgatttatgattatttatatattatgtcacatgtgaatttgcgataaattttttgccc 12211116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 9070510 - 9070477
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaattt 86  Q
    |||||||||||| |||||||||||||||||||||    
T  9070510 ttttcagacttcgcgtatattacatggtcaattt 9070477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 29132186 - 29132149
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaat 90  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  29132186 ttttcagacttcgcgtatattacatgatcaatttcaat 29132149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 31854203 - 31854251
Alignment:
Q  41 ttacagggccaattttcagacttcacgtatattacatggtcaatttcaat 90  Q
    |||||||| || |||||||||||||| ||||||||| |||||||||||||    
T  31854203 ttacagggtcatttttcagacttcacatatattaca-ggtcaatttcaat 31854251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 20628700 - 20628664
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaa 89  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  20628700 ttttcagacttcccgtatattacagggtcaatttcaa 20628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 37236189 - 37236121
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| |||||||||  ||| |||||||| |||| ||||| ||  | ||||||||||||||    
T  37236189 atatattatgtcacatgtgaatttgcgataaatttttcgcccaggctctatgtaatttctggctccgcc 37236121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 55464649 - 55464605
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||| |||||||||||| |||||||  |||||||||||||||||    
T  55464649 aaattatacttttgttgaaaaaatgacgaacctcttttatttcga 55464605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 19986399 - 19986656
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           |||||||||| |    
T  19986399 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataatcctattttaaattgtacgt 19986498  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga-nnnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgt 204  Q
    ||||||||||||||||||||||||||||||||||        |   |||| ||||| |          ||||||||||| |||||||| |||||||||||    
T  19986499 ttgttgacaaaatgataaacctcttttatttcgattttttttagaaaaaaataaaaataaaaataaaatatttcgatttatgactgtttatatattatgt 19986598  T
Q  205 catatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||  |||||||| | ||  |||||||||||||| |||||||||||| |||||||||||    
T  19986599 caagtgtgaatttaagattaattttttgcccggactccataaatttcctggctccgcc 19986656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 39656739 - 39656487
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||||| ||    
T  39656739 atggttagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtattt 39656640  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
    ||||||||||||||||||||||||||||||||||        |  ||||  |||||           ||||||||||| |||||||| ||||||||| ||    
T  39656639 ttgttgacaaaatgataaacctcttttatttcgatttcttttaggaaaa--aaaat--aaaaaaaaatatttcgatttatgactgtttatatattatatc 39656544  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    | ||||||||| | ||  ||||||||||||| |||||||||||||||||||||||||    
T  39656543 acatgtgaatttaagattaattttttgcccgagctccataaattttctggctccgcc 39656487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 16155850 - 16155979
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgt 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||           ||||||||||||||||    
T  16155850 tcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattatgtggtcaatttcaattaataaccctattttaaattgtacttttgt 16155949  T
Q  110 tgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||    
T  16155950 tgacaaaatgataaacctcttttatttcga 16155979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16333112 - 16332979
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||||| ||    
T  16333112 atggtcataatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtaatt 16333013  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  16333012 ttgttgacaaaatgataaacctcttttatttcga 16332979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 10036862 - 10036995
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| | |||||| |||||||||||||||||           ||||||||||||    
T  10036862 atggtcagaatacatgttatttaattacagggtgaattttcagacttcacatgtattacgtggtcaatttcaattaataaccctattttaaattgtactt 10036961  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  10036962 ttgttgacaaaatgataaacctcttttatttcga 10036995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 31500929 - 31500681
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||    
T  31500929 atggtcagagtacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaacttcaattaattatcctattttaaattgtactt 31500830  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
       ||||||||||||||||||| |||||| ||||       |||||||||||||||           ||   |||||| |||||||| ||||| ||||||    
T  31500829 ---ttgacaaaatgataaacctattttatatcgatttttttaattaaaattaaaataaataaaaagtta---cgatttatgactgttgatatactatgtc 31500736  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    | |||||||||  ||| ||||||||||  ||| |||||||||||| |||||||||    
T  31500735 acatgtgaatttgcgataaattttttgttcggactccataaatttcctggctccg 31500681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 36292832 - 36292702
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||           ||||||||||||    
T  36292832 atggtcagaatacatgttatttaattacagggtcaattttcagacttcaagtatattacgtggttaatttcaattaataaccctattttaaattgtactt 36292733  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||||||||||||||    
T  36292732 ttgttgataaaatgataaacctcttttattt 36292702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 13818932 - 13819065
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||| ||||||||||||||||||||||| || ||||||| |||||||||||||||||| | |||||||||||||||           ||||||||||||    
T  13818932 atggttagaatacatgttatttaattacatggtcaatttttagacttcacgtatattacgtagtcaatttcaattaataaccctattttaaattgtactt 13819031  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  13819032 ttgttgacaaaatgataaacctcttttatttcga 13819065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 12278067 - 12277936
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||||||    
T  12278067 atggtcaaaatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtactt 12277968  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || ||||||||||||||| |||||||||||||    
T  12277967 ttattgacaaaatgataatcctcttttatttc 12277936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 39435652 - 39435785
Alignment:
Q  17 atggtcagaatacatgtt---atttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgta 102  Q
    ||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           |||||||||    
T  39435652 atggtcagaatacatgttgttatttaattacagggacaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgta 39435751  T
Q  103 cttttgttgacaaaatgataaacctcttttattt 136  Q
    |||||||||| |||||||||||||||||||||||    
T  39435752 cttttgttgataaaatgataaacctcttttattt 39435785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 17331207 - 17331078
Alignment:
Q  18 tggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttt 106  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||           |||||||||||||    
T  17331207 tggtcaaaatacatgttatttaattacagagtcaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtacttt 17331108  T
Q  107 tgttgacaaaatgataaacctcttttattt 136  Q
    | ||||||||||||||||||||||||||||    
T  17331107 tattgacaaaatgataaacctcttttattt 17331078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 31681321 - 31681452
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||           |||||| || ||    
T  31681321 atggtcaaaatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattatagtt 31681420  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  31681421 ttattgacaaaatgataaacctcttttatttc 31681452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 33431275 - 33431406
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||           |||||| || ||    
T  33431275 atggtcaaaatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattatagtt 33431374  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  33431375 ttattgacaaaatgataaacctcttttatttc 33431406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36292309 - 36292444
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattaca-tggtcaatttcaattaa-----------taaattgtac 103  Q
    ||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||           ||||||||||    
T  36292309 atggtcagaatacatgtgatttaatttacagggtcaattttcaaacttcacgtatattacattggtcaatttcaattaataaccttattttaaattgtac 36292408  T
Q  104 ttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||| ||||||||||||||||||||||||||    
T  36292409 ttttgttgataaaatgataaacctcttttatttcga 36292444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 26282529 - 26282399
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  26282529 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 26282430  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  26282429 ttgttgataaaatgataaacttcatttattt 26282399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 1775575 - 1775457
Alignment:
Q  32 gttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttgacaaaatga 120  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||           ||||||| |||||||||||||||||||    
T  1775575 gttatttaattacaggttcaattttcagacttcacgtatattacgtggtcaatttcaatcaataaccatattttaaattgcacttttgttgacaaaatga 1775476  T
Q  121 taaacctcttttatttcga 139  Q
    |||||||||||||||||||    
T  1775475 taaacctcttttatttcga 1775457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 13819086 - 13819175
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||| ||| |||||||    
T  13819086 tatttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcctgactccgcc 13819175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 1775423 - 1775337
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    |||||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||||| ||||||||||||||||| |||||||||    
T  1775423 atttcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgggctccataaatttcctggctccg 1775337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 28801837 - 28801961
Alignment:
Q  25 aatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttga 112  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||||| || ||||||||||||||           |||||||||||||||||||    
T  28801837 aatacatgttatttaattacaaggtcaatttttcagacttcacgtatattacgtgatcaatttcaattaaaaaccctattttaaattgtacttttgttga 28801936  T
Q  113 caaaatgataaacctcttttatttc 137  Q
    ||||||||  |||||||||||||||    
T  28801937 caaaatgaggaacctcttttatttc 28801961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 43069797 - 43069931
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagac---ttcacgtatattacatggtcaatttcaattaa-----------taaattgt 101  Q
    |||||||||||| |||| |||||||| ||| || ||||||||||||   ||||||||||||||||||||||||||||||||           ||||||||    
T  43069797 atggtcagaatatatgtgatttaatttacaaggtcaattttcagacgacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgt 43069896  T
Q  102 acttttgttgacaaaatgataaacctcttttattt 136  Q
    |||||||||||| ||||||||||||||||||||||    
T  43069897 acttttgttgactaaatgataaacctcttttattt 43069931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 39435828 - 39435911
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||    
T  39435828 gatttatgactgtttatatattatttcacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccgcc 39435911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 10037029 - 10037114
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcccct 265  Q
    |||| |||||||| ||||||||| ||| ||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  10037029 atttatgactgtttatatattatatcacatgtgaatttatgattaattttttgcccgggctccataaatttcctggctccgcccct 10037114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 15959153 - 15959080
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaa 93  Q
    ||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  15959153 tcagaatacatattatttaattacagggttaatttttcagacttcgcgtatattacatggtcaatttcaattaa 15959080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 16332957 - 16332872
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||| | | ||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||    
T  16332957 tcgatttatgactgtttatatattatattacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccgcc 16332872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 26282370 - 26282285
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  26282370 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 26282285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 36292662 - 36292577
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  36292662 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgccccggctccataaatttcctggctccgcc 36292577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 37255625 - 37255720
Alignment:
Q  55 ttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||||||||||||| ||||||           ||||||||| |||| |||||||||||||||||||||||||||||||    
T  37255625 ttcagacttcacgtatattacatggtcaattttaattaataatcctattttaaattgtatttttattgacaaaatgataaacctcttttatttcga 37255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 192764 - 192823
Alignment:
Q  31 tgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaat 90  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||    
T  192764 tgttatttaattacagggttaattttcagactttacgtatattacaaggtcaatttcaat 192823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 43069977 - 43070069
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcccctatatat 271  Q
    ||||||| |||||||| |||||||  ||||  |||||||| |||| |||||||| ||||||||||||||||||| ||||||||||| ||| ||||    
T  43069977 tcgatttatgactgtttatatatt--gtcacgtgtgaatttacgataaatttttcgcccgggctccataaatttcctggctccgccactagatat 43070069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 16156017 - 16156109
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaatttttt---gcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||| |||| ||||||||||||| ||||||||| ||||  ||||||||   | ||||||||||||||||| |||||||||||    
T  16156017 tatttcgatttgtgattgtttatatattatgtcacatgtgaatttacgattaattttttaccgtccgggctccataaatttcctggctccgcc 16156109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 28801956 - 28802042
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctcc 259  Q
    |||||| |||| |||||||| ||||||||||||  |||||||||  |||  |||||||||||||| ||||||||||||  |||||||    
T  28801956 tatttcaatttatgactgtttatatattatgtcgcatgtgaatttgcgattaattttttgcccggactccataaatttcttggctcc 28802042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 31681518 - 31681557
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31681518 aaatttttcgcccgggctccataaattttctggctccgcc 31681557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 33431472 - 33431511
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  33431472 aaatttttcgcccgggctccataaattttctggctccgcc 33431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 204096 - 204164
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| ||||||||| |||| |||||||| |||| || || ||||| |||||| |||||||    
T  204096 atatattatgtcacatgtgaatttacgataaatttttcgcccaggttctataaaatttctgactccgcc 204164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 36292492 - 36292573
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| |||||||  |||| |||||||||   || |||||||| |||||| |||||||||||| |||||||||||    
T  36292492 gatttatgactgtttatatatt--gtcaaatgtgaatttgggataaatttttcgcccggactccataaatttcctggctccgcc 36292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 17331013 - 17330974
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  17331013 aaatttttcgcccgggctccataaatttcctggctccgcc 17330974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 1280766 - 1280811
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||| |  | |||||||||||||||    
T  1280766 taaattgtacttttgttgacaaaattacgagcctcttttatttcga 1280811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 2985847 - 2985915
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||| ||| ||||||||| |||| |||||||| |||| ||||| ||| | || |||||||||||    
T  2985847 atatattatttcacatgtgaatttacgataaatttttcgcccaggctctatataattcctggctccgcc 2985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 34948038 - 34947905
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  34948038 atggtcagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtactt 34947939  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  34947938 ttgttgacaaaatgataaacctcttttatttcga 34947905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 29744222 - 29744358
Alignment:
Q  15 atatggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgta 102  Q
    ||||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||| ||||||||           |||||||||    
T  29744222 atatggtcagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatctcaattaataaccctattttaaattgta 29744321  T
Q  103 cttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  29744322 cttttgttgacaaaatgataaacctcttttatttcga 29744358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 33228564 - 33228430
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtact 104  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||           |||||||||||    
T  33228564 atggtcagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtact 33228465  T
Q  105 tttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||| |||||||||||||    
T  33228464 tttgttgacaaaatgataaacatcttttatttcga 33228430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 28997684 - 28997815
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           |||||| || ||    
T  28997684 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattatagtt 28997783  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  28997784 ttattgacaaaatgataaacctcttttatttc 28997815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 399573 - 399703
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  399573 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 399672  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  399673 ttgttgataaaatgataaacttcatttattt 399703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 13838754 - 13838884
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||           ||||||||| ||    
T  13838754 atggttagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtattt 13838853  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| ||||||||||| |||||||||||    
T  13838854 ttgttgataaaatgataaatctcttttattt 13838884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 31028163 - 31028033
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    ||||||||||| |||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  31028163 tcagaatacatattatttaattacagcgtcgatttttcagacttcacgtatattacatggtcaatttcaattaatagccatattttaaattgtacttttg 31028064  T
Q  109 ttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||| |  |||||||||||||||||    
T  31028063 ttgacaaaataaggaacctcttttatttcga 31028033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 34947883 - 34947798
Alignment:
Q  176 ttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgc 261  Q
    |||||||| ||| |||| ||||||||| ||| ||||||||| ||||  ||||||| ||||||||||||||||||| ||||||||||    
T  34947883 ttcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccgc 34947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 399731 - 399815
Alignment:
Q  178 cgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||| ||||  ||||||||||||| |||||||||||    
T  399731 cgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaagctccataaatttcctggctccgcc 399815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34253087 - 34253164
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||||||||||  ||| ||| | || |||||||||||||||||||||||||| || | |||||||||||||||    
T  34253087 atggtcagaatacatgtt--ttatttaaatggtcaattttcagacttcacgtatattacgtgattaatttcaattaataa 34253164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 24074658 - 24074722
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctc 258  Q
    ||||||||||||| ||||||||| |||| |||||||| |||||||||| ||||| ||||| ||||    
T  24074658 atatattatgtcacatgtgaatttacgataaatttttcgcccgggctctataaaatttctagctc 24074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 29744393 - 29744474
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| |||||||  |||| ||||||| |  | | |||||||| ||||||||||||||||||| |||||||||||    
T  29744393 gatttatgactgtttatatatt--gtcacatgtgaagttgcaataaatttttcgcccgggctccataaatttcctggctccgcc 29744474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 8058555 - 8058320
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||           |||||||||||     
T  8058555 atggtcaaaatacatgttatttaattacaagaccaattttcagacttcacatatattacatgatcaatttcaattaataatcctattttaaattgtacta 8058456  T
Q  106 ttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaatatattatgtc 205  Q
    |||||||||||||||||||||||||||||||| |       ||||||||||||||            ||||||||||| |||||||| |||||||||||     
T  8058455 ttgttgacaaaatgataaacctcttttatttc-aattttttaattaaaattaaaa--------aaaatatttcgatttatgactgttgatatattatgta 8058365  T
Q  206 atatgtgaattcacgagaaattttttgcccgggctccataaattt 250  Q
    | |||||||||  ||| ||||||||||||| ||||||||||||||    
T  8058364 acatgtgaatttgcgataaattttttgcccaggctccataaattt 8058320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 17444247 - 17444117
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  17444247 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtactt 17444148  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||||||||||||||    
T  17444147 ttgttgataaaatgataaacctcttttattt 17444117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16406084 - 16406217
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  16406084 atggtcagaatacatgttatttaattacatggtgaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtactt 16406183  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||| ||||||||||||||||||||||||||||    
T  16406184 ttgttaacaaaatgataaacctcttttatttcga 16406217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 18982499 - 18982632
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||           ||||||||||||    
T  18982499 atggtcagaatacatgttatttaattacagggtaaattttcagacttcacgtatattacgtggtaaatttcaattaataaccatattttaaattgtactt 18982598  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  18982599 ttgttgacaaaatgataaacctcttttatttcga 18982632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 42442940 - 42443073
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  42442940 atggtcataatacatgttatttaattacatggtccattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtactt 42443039  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  42443040 ttgttgacaaaatgataaacctcttttatttcga 42443073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 771687 - 771822
Alignment:
Q  15 atatggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtac 103  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||           |||||||||     
T  771687 atatggtcagaatacatgttatttaattacatggtcaattttccgacttcacttatattacatggtcaatttcaattaataaccctattttaaattgtat 771786  T
Q  104 ttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  771787 ttttgttgacaaaatgataaacctcttttatttcga 771822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 32126400 - 32126267
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||           |||| |||||||    
T  32126400 atggtcagaatacatgttatttaattacggggtcaattttcagacttcacgtatattacgtgatcaatttcaattaataaccctattttaaactgtactt 32126301  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||| ||||||||||||||    
T  32126300 ttgttgacaaaatgataaatctcttttatttcga 32126267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 31580942 - 31580815
Alignment:
Q  23 agaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttg 111  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||           ||||||||| ||||||||    
T  31580942 agaatacatgttatttaattacagggacaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtatttttgttg 31580843  T
Q  112 acaaaatgataaacctcttttatttcga 139  Q
    || |||||||||||||| ||||||||||    
T  31580842 acgaaatgataaacctcctttatttcga 31580815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 35963645 - 35963777
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||           ||| ||||||||    
T  35963645 atggtaagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaagttgtactt 35963744  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||| |||||||||||||||||    
T  35963745 ttgttgacaaaatgat-aacctcttttatttcga 35963777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 45419537 - 45419668
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||           ||||||||| ||    
T  45419537 atggtcaaaatacatgttatttaattacatggccaatttttagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 45419636  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  45419637 ttattgacaaaatgataaacctcttttatttc 45419668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 6403015 - 6402885
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  6403015 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 6402916  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  6402915 ttgttgataaaatgataaacttcatttattt 6402885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 41250844 - 41250765
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||    
T  41250844 atggtcagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggttaatttcaattaataa 41250765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 12756050 - 12755937
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataaattgtacttttgttgacaaa 116  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||| | ||||||| |||||||||||       ||||||||| |||| ||||||||    
T  12756050 atggtcaaaatacatgttatttaattacatggctaattttcagacttcgcatatattatatggtcaattt-------taaattgtagttttattgacaaa 12755958  T
Q  117 atgataaacctcttttatttc 137  Q
    |||||||||||||||||||||    
T  12755957 atgataaacctcttttatttc 12755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 258
Target Start/End: Complemental strand, 17090390 - 17090231
Alignment:
Q  97 attgtacttttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntatttcgatttttgactgttaata 196  Q
    |||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||| ||           | |||||||| ||||| || |||    
T  17090390 attgtacttttgttgacaaaatgagaaacctcttttatttcgatttttttaattaaaattaaacttaaaaaaaaa--aattcgatttatgactattgata 17090293  T
Q  197 tattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctc 258  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||||||    
T  17090292 tattatgtcatatgtgaatttacgataaattttttgcccggactccataaatttcctggctc 17090231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 7071742 - 7071659
Alignment:
Q  16 tatggtcagaatacatgttatttaattacagggccaa-ttttcagacttcacgtatattacatggtcaatttcaattaataaatt 99  Q
    |||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7071742 tatgttcagaatacatgttatttaattatagggtcaatttttcagacttcacgtatatta-atggtcaatttcaattaataaatt 7071659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 17035882 - 17035728
Alignment:
Q  97 attgtacttttgttgacaaaatgataaacctcttttatttcgannnnnnnaattaaaattaaaattnnnnnnnnnntat-ttcgatttttgactgttaat 195  Q
    |||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||           |  |||||||| ||||| || ||    
T  17035882 attgtacttttgttgacaaaatgagaaacctcttttatttcgatttttttaattaaaattaaaatttaaaaaaaaaaaaattcgatttatgactattgat 17035783  T
Q  196 atattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattt 250  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||    
T  17035782 atattatgtcatatgtgaatttacgataaactttttgcccggactccataaattt 17035728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 2286862 - 2286988
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||       || |||||||||||||||||           ||||||| ||||    
T  2286862 atggtcagaatacatgttatttaattacagggtcaattttcatacttcac-------acgtggtcaatttcaattaataaccctattttaaattgcactt 2286954  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  2286955 ttgttgacaaaatgataaacctcttttatttcga 2286988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 41250674 - 41250592
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| ||||||||||||||||||||||||||    
T  41250674 atttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaattttctggctccgcc 41250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 6402857 - 6402772
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  6402857 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 6402772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 17444076 - 17443991
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||| | |||||||||||| |||||||||||    
T  17444076 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccagactccataaatttgctggctccgcc 17443991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 26238696 - 26238785
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||  |||    |||||||||||||||||||||||||||||||||||||    
T  26238696 tatttcgatttatgactgtttatatattatgtcgcatgtgaatttgcgaatttttttttgcccgggctccataaattttctggctccgcc 26238785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 31580777 - 31580691
Alignment:
Q  176 ttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||| |||| ||||||||||||| || ||| || | ||  |||||||||||||||||||||||||||||||||||||||    
T  31580777 ttcgatttatgattgtttatatattatgtcacatatgagtttatgattaattttttgcccgggctccataaattttctggctccgcc 31580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 26161775 - 26161702
Alignment:
Q  189 tgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| ||||||||| ||| |||||||||  ||| |||||||||||||||||||||||||||| |||||||||||    
T  26161775 tgtttatatattatctcacatgtgaatttgcgataaattttttgcccgggctccataaatttcctggctccgcc 26161702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 32126274 - 32126185
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||||| |||| |||| ||| ||||||||| |  |  ||||||||||||| |||||||||||||||||||||||||    
T  32126274 tatttcgatttatgactgtttatattttatatcacatgtgaatttagaattaattttttgcccgagctccataaattttctggctccgcc 32126185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 26238573 - 26238703
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaa-ttttcagacttcacgtatattacatggtcaatttcaattaataa-----------attgtacttttg 108  Q
    ||||||||||||||||||||||| | || ||| |||||| |||||  ||||||||||||||||||||||||||||||           |||||||||||     
T  26238573 tcagaatacatgttatttaattatatggtcaaattttcaaacttcgtgtatattacatggtcaatttcaattaataaccctattttaaattgtacttttc 26238672  T
Q  109 ttgacaaaatgataaacctcttttatttcga 139  Q
    ||||| ||||||  |||||||||||||||||    
T  26238673 ttgacgaaatgaggaacctcttttatttcga 26238703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 772269 - 772336
Alignment:
Q  195 tatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||||||  ||| || ||||||||||||||||||||||||| |||||||||||    
T  772269 tatattatttcatatgtgaatttgcgataatttttttgcccgggctccataaatttcctggctccgcc 772336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 16406240 - 16406322
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||||| |||| |||||||||||||||| |||||||    
T  16406240 atttatgactgtttatatattatatcacatgtgaatttacgattaattttttgtccggactccataaattttctgactccgcc 16406322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 18982657 - 18982739
Alignment:
Q  180 atttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||| |||||||| ||||||||||||  ||||||||| ||||   ||||||||||| |||||||||||||||||| |||||||    
T  18982657 atttatgactgtttatatattatgtcgcatgtgaatttacgatttattttttgcccaggctccataaattttctgactccgcc 18982739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 4554388 - 4554299
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||||| || ||||||||||||| || | |||| |||| ||||||||||||| | |||||||||||| || ||||||||    
T  4554388 tatttcgatttatgactatttatatattatgtcacatctaaatttacgataaattttttgcccagactccataaatttcctagctccgcc 4554299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 42443095 - 42443184
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||||| |||  |||||||||||| ||| |||||||    
T  42443095 tatttcgatttatgactgtttatatattatatcacatgtgaatttacgattaattttttgtccgaactccataaatttcctgactccgcc 42443184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 26655758 - 26655690
Alignment:
Q  194 atatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||||| ||||||||| |||| ||||||||||||| ||||| ||||| ||| ||||||||||    
T  26655758 atatattatgtcacatgtgaatttacgataaattttttgcccaggctctataaaatttttggctccgcc 26655690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 7071603 - 7071528
Alignment:
Q  185 tgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    |||||||| || |||||||||| |||||||||  ||| ||| |||||| |||||||||||||||| ||||||||||    
T  7071603 tgactgtttatgtattatgtcacatgtgaatttgcgataaaatttttggccgggctccataaattctctggctccg 7071528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 26656331 - 26656286
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  26656331 taaattgtacttttgttgacaaaatgacatacctcttttatttcga 26656286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 26161857 - 26161814
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttc 137  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  26161857 taaattgtacttttattgacaaaatgataaacctattttatttc 26161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 35963799 - 35963884
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| |||| ||||||||| ||  ||||||||| ||||  ||||||| || |||||||||||||||| ||| |||||||    
T  35963799 tcgatttatgattgtttatatattatatcgcatgtgaatttacgattaatttttcgctcgggctccataaatttcctgactccgcc 35963884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 2287036 - 2287111
Alignment:
Q  187 actgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||| ||||| ||||||| ||||||||| | ||  |||||||||||||  |||||||||||| ||| |||||||    
T  2287036 actgtttatatagtatgtcacatgtgaatttatgattaattttttgcccgaactccataaatttcctgactccgcc 2287111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 26161914 - 26161883
Alignment:
Q  17 atggtcagaatacatgttatttaattacaggg 48  Q
    ||||||||||||||||||||||||||||||||    
T  26161914 atggtcagaatacatgttatttaattacaggg 26161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 28841257 - 28841296
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttat 134  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  28841257 aaattgtacttttattgacaaaatgataaccctcttttat 28841296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 44084175 - 44084136
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  44084175 aaatttttcgcccaggctccataaattttctggctccgcc 44084136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 45419734 - 45419773
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  45419734 aaatttttcgcccgggctccataaattttctgactccgcc 45419773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 45122217 - 45122279
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgccc 235  Q
    |||||| |||| |||||||| ||||||||| ||| |||||||||  ||| |||||||||||||    
T  45122217 tatttcaatttatgactgtttatatattatatcacatgtgaatttgcgataaattttttgccc 45122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 2043327 - 2043360
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaattt 86  Q
    |||||||||||||| |||||||||||||||||||    
T  2043327 ttttcagacttcacatatattacatggtcaattt 2043360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 17373004 - 17372967
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  17373004 ttttcagaattcacatatattacatggtcaatttcaat 17372967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 18829889 - 18829926
Alignment:
Q  53 ttttcagacttcacgtatattacatggtcaatttcaat 90  Q
    ||||||||||| || |||||||||||||||||||||||    
T  18829889 ttttcagactttacatatattacatggtcaatttcaat 18829926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36409439 - 36409572
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaa----------taaattgtactt 105  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  36409439 atggtcagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataacctattttaaattgtactt 36409538  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||||||||||||||||||||||||    
T  36409539 ttgttgacaaaatgataaacctcttttatttcga 36409572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 4404961 - 4405094
Alignment:
Q  15 atatggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtac 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||           ||||||||||    
T  4404961 atatggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggttaattttaattaataatcttattttaaattgtac 4405060  T
Q  104 ttttgttgacaaaatgataaacctcttttatttc 137  Q
    |||| |||||||||||||||||||||||||||||    
T  4405061 ttttattgacaaaatgataaacctcttttatttc 4405094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 34136017 - 34135884
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||||||    
T  34136017 atggtcaaaatacatgttatttaattacagggtcaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtactt 34135918  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || ||||||||||||||||| |||||||||||||    
T  34135917 ttattgacaaaatgataaacatcttttatttcga 34135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 7278981 - 7279138
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||           ||||||||||||    
T  7278981 atggtaagaatacatgttatttaattacagggccaattttcagacttcacgtatattatatgatcaatttcaattaataatcttattttaaattgtactt 7279080  T
Q  106 ttgttgacaaaatgat-aaacctcttttatttcgannnnnnnaattaaaattaaaatt 162  Q
    |||||||| ||||||| |||||| |||||||||||       ||||||||||||||||    
T  7279081 ttgttgactaaatgataaaacctattttatttcgatttttttaattaaaattaaaatt 7279138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 9878175 - 9878251
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa 93  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  9878175 atggtcagaatacatgttatttaattacagggtcaattttcagacttcatgtatattacatggtcaatttcaattaa 9878251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 40470076 - 40469946
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaattttc-agacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttg 108  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  40470076 tcagaatacatgttatttaattacagggtcaattttttagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtacttttg 40469977  T
Q  109 ttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||||||  |||||||||||||||||    
T  40469976 ttgacaaaatgaggaacctcttttatttcga 40469946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16787237 - 16787104
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||           ||||||||||||    
T  16787237 atggtcaaaatacatgttatttaattacaggaccaatttttagacttcacatatattacatggtcaattttaattaataagcctattttaaattgtactt 16787138  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||| ||||||||||||||||||||||    
T  16787137 ttattgacaaattgataaacctcttttatttcga 16787104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 3648003 - 3647876
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||  |||||||||||||||||           ||||||||||||    
T  3648003 atggtcaaaatacatgttatttaattacagggtaaattttcagacttcatgtatattatgtggtcaatttcaattaataaccctattttaaattgtactt 3647904  T
Q  106 ttgttgacaaaatgataaacctctttta 133  Q
    ||||||||||||||||||||||||||||    
T  3647903 ttgttgacaaaatgataaacctctttta 3647876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 24019602 - 24019472
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  24019602 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 24019503  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  24019502 ttgttgataaaatgataaacttcatttattt 24019472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 28524154 - 28524284
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  28524154 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 28524253  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  28524254 ttgttgataaaatgataaacttcatttattt 28524284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 39915470 - 39915600
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  39915470 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 39915569  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  39915570 ttgttgataaaatgataaacttcatttattt 39915600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 29727588 - 29727463
Alignment:
Q  25 aatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttgac 113  Q
    |||||||||||||||||||||  | ||||||||||||||||| |||||||| |||||||||||||||||           ||||||||||||||||||||    
T  29727588 aatacatgttatttaattacaatgtcaattttcagacttcacatatattacgtggtcaatttcaattaataaccctattttaaattgtacttttgttgac 29727489  T
Q  114 aaaatgataaacctcttttatttcga 139  Q
    |||||||||||| |||||||||||||    
T  29727488 aaaatgataaacatcttttatttcga 29727463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 23403023 - 23403153
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||           ||||||||||||    
T  23403023 atggtcaaaataaatgttatttaattacaggaccaattttcagacttcacatataatacatggtcaattttaattaataatcctattttaaattgtactt 23403122  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    || ||||||||||||||||||| ||||||||    
T  23403123 ttattgacaaaatgataaacctattttattt 23403153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 15839231 - 15839362
Alignment:
Q  20 gtcagaatacatgttatttaa----ttacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtact 104  Q
    |||||||||||||||||||||    |||||||| |||||||||||||| | ||||||||| |||||||||| ||||||           ||||||| |||    
T  15839231 gtcagaatacatgttatttaattaattacagggtcaattttcagactttaagtatattacgtggtcaattttaattaataatcctattttaaattgcact 15839330  T
Q  105 tttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||||||||||||||||||||||||||||    
T  15839331 tttgttgacaaaatgataaacctcttttattt 15839362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 29727434 - 29727350
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgc 261  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||||| |||||||||||| ||||||||||    
T  29727434 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccggactccataaatttcctggctccgc 29727350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 40469953 - 40469866
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    ||||||||||| |||||||| ||||||||| ||  ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  40469953 tatttcgatttatgactgtttatatattatatcgcatgtgaatttacgataaatattttgcccggactccataaattttctggctccg 40469866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 27046929 - 27047015
Alignment:
Q  176 ttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||| ||||||||||||| |||| ||||  ||| ||||||||||||||||||||||| |||| |||||||||||    
T  27046929 ttcgatttatgactgtttatatattatgtcacatgtaaatttgcgataaattttttgcccgggctccatatatttcctggctccgcc 27047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 28524312 - 28524397
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  28524312 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 28524397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 29632502 - 29632587
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  29632502 tcgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 29632587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 3436196 - 3436319
Alignment:
Q  25 aatacatgttatttaattacagggccaat-tttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttga 112  Q
    |||||||||||||| | |||| || |||| ||||||||||||||||| ||| ||||||||||||||||||           |||||||||||||||||||    
T  3436196 aatacatgttattttactacatggtcaatgtttcagacttcacgtatcttatatggtcaatttcaattaataaccctattttaaattgtacttttgttga 3436295  T
Q  113 caaaatgataaacctcttttattt 136  Q
    ||||||||  ||||| ||||||||    
T  3436296 caaaatgaggaacctattttattt 3436319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 24019444 - 24019359
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||||| || ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  24019444 tcgatttatgactatttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 24019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 27046855 - 27046900
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  27046855 taaattgtacttctgttgacaaaatgataaacctcttttatttcga 27046900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 39915628 - 39915713
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||||| || ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  39915628 tcgatttatgactatttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 39915713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 42231949 - 42231991
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttattt 136  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  42231949 taaattgtacttttgttgacaaaatgataaacctattttattt 42231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 3436318 - 3436403
Alignment:
Q  175 tttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccg 260  Q
    ||||||||| |||||||| ||||||||||||| |||||||||  ||| ||||  ||||||| | ||||||||||||  ||||||||    
T  3436318 tttcgatttatgactgtttatatattatgtcacatgtgaatttgcgataaatgatttgccctgactccataaatttcttggctccg 3436403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 34135826 - 34135787
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  34135826 aaatttttcgcccgggctccataaattttctggctccgcc 34135787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 3647835 - 3647754
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctgg 255  Q
    ||||| ||||| | |||||| |||||||||| || ||||||||| ||||  |||||||||||||| |||||||||||| ||||    
T  3647835 tattttgatttataactgtttatatattatg-cacatgtgaatttacgattaattttttgcccggactccataaatttcctgg 3647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 42232015 - 42232104
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| ||||| ||| |||| ||||||||| | | || | |||| |||| ||||||||||||| | ||||||||||| ||||||||||||    
T  42232015 tatttggatttatgattgtttatatattatcttacatataaatttacgataaattttttgcccagactccataaattatctggctccgcc 42232104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 21958698 - 21958742
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||| |||||||  |||||||||||||||||    
T  21958698 aaattgtacttttgttgaaaaaatgaagaacctcttttatttcga 21958742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 16787043 - 16787004
Alignment:
Q  223 aaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  16787043 aaatttttcgcccgggctccataaatttcctggctccgcc 16787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 23403188 - 23403271
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| ||||| || ||||||||||||| |||||||||   || |||  ||| ||||| ||||||||||||| |||||||||||    
T  23403188 gatttatgactattgatatattatgtcacatgtgaatttgggaaaaaaatttcgcccgagctccataaatttcctggctccgcc 23403271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 42447147 - 42447190
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaatt 216  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||    
T  42447147 tatttcgatttatgactgtttatatattatgtcacatgtgaatt 42447190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 42231892 - 42231930
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattt 55  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  42231892 atggtcaaaatacatgttatttaattacagggtcaattt 42231930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 32343002 - 32343046
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||    
T  32343002 aaattgtagttttgttgacaaaatggcatacctcttttatttcga 32343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 32355489 - 32355533
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||    
T  32355489 aaattgtagttttgttgacaaaatggcatacctcttttatttcga 32355533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 32359608 - 32359652
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||    
T  32359608 aaattgtagttttgttgacaaaatggcatacctcttttatttcga 32359652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 32372139 - 32372183
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||| ||||||||||||||||| | ||||||| ||||||||    
T  32372139 aaattgtagttttgttgacaaaatgacatacctcttatatttcga 32372183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 19391102 - 19391231
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa----------taaattgtacttt 106  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||          |||||||||||||    
T  19391102 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcagttaataacctattttaaattgtacttt 19391201  T
Q  107 tgttgacaaaatgataaacctcttttattt 136  Q
    |||||| |||||||||||||||||||||||    
T  19391202 tgttgataaaatgataaacctcttttattt 19391231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 45183935 - 45184066
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           ||||||||| ||    
T  45183935 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtagtt 45184034  T
Q  106 ttgttgacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||||||||||||||||||    
T  45184035 ttattgacaaaatgataaacctcttttatttc 45184066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 11017482 - 11017349
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||           ||||||||||||    
T  11017482 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcgattttaattaataatcctattttaaattgtactt 11017383  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    || |||||||| ||||||||||||||||||||||    
T  11017382 ttattgacaaattgataaacctcttttatttcga 11017349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 40080953 - 40080820
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||| |||||||||||||| | || |||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  40080953 atggtcagaatatatgttatttaattatatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccttattttaaattgtactt 40080854  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||| |||||||||||    
T  40080853 ttgttgacaaaatgataaaccttttttatttcga 40080820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 34083333 - 34083207
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||           ||||||| ||||    
T  34083333 atggtcagaatacatgttatttaattacagggtcaattttcagagttcaagtatattacgtggtcaatttcaattaataaccctattttaaattgcactt 34083234  T
Q  106 ttgttgacaaaatgataaacctctttt 132  Q
    |||||||||||||||||||||||||||    
T  34083233 ttgttgacaaaatgataaacctctttt 34083207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 35514956 - 35515082
Alignment:
Q  22 cagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgtt 110  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||           ||||||||| |||||||    
T  35514956 cagaatacatgttatttaattacagggtaaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtatttttgtt 35515055  T
Q  111 gacaaaatgataaacctcttttatttc 137  Q
    || |||||||||||||| |||||||||    
T  35515056 gataaaatgataaaccttttttatttc 35515082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 6268633 - 6268503
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||           ||||||||||||    
T  6268633 atggtcagaatacatgttatttaattacaaggtcaattttcagacttcacgtatattacgtggttaatttcaattaataaccctattttaaattgtactt 6268534  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  6268533 ttgttgataaaatgataaacttcatttattt 6268503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 22967655 - 22967576
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||    
T  22967655 atggtcagaatacatgttatttaattacagggtcaattttcaaacttcacgtatattacgtggttaatttcaattaataa 22967576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 33041905 - 33041984
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  33041905 atggtcaaaatacatgttatttaattacagggccaattttcagacttcacatatattacatagtcaattttaattaataa 33041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 39772746 - 39772825
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  39772746 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataa 39772825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 19564729 - 19564595
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa-----------attgtact 104  Q
    ||||||| ||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  19564729 atggtcaaaatacatgtgatttaattcacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataaccatattttacattgtact 19564630  T
Q  105 tttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||| ||||||||||||||| || |||||||||||    
T  19564629 tttgatgacaaaatgataaatcttttttatttcga 19564595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 6930098 - 6929975
Alignment:
Q  25 aatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtacttttgttgac 113  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||| ||||||           ||||||||| |||| |||||    
T  6930098 aatacatgttatttaattacagggtcaattttcagacttcacacatattacatggtaaattttaattaataatcctattttaaattgtagttttattgac 6929999  T
Q  114 aaaatgataaacctcttttatttc 137  Q
    ||||||||||||||||||||||||    
T  6929998 aaaatgataaacctcttttatttc 6929975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 1185595 - 1185505
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaa-ttcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||| || |||| ||||||||||||||| || |||||||||||||||||||||    
T  1185595 tattttgatttatgactgtttatatattatgtcacatgtgaaatttacgataaattttttgcccggacttcataaattttctggctccgcc 1185505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 45336812 - 45336892
Alignment:
Q  17 atggtcagaatacatgttatttaatt-acagggccaattttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    ||||| ||||||||||| |||||||| ||| ||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  45336812 atggttagaatacatgtgatttaatttacaaggttacttttcagacttcacgtatattacatggtcaatttcaattaataa 45336892  T

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Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 6502772 - 6502718
Alignment:
Q  25 aatacatgttatttaattacagggccaattttcagacttcacgtatattacatgg 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  6502772 aatacatgtaatttaattacagggccaattttcagacttcacgtatattatatgg 6502718  T

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Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 1185698 - 1185642
Alignment:
Q  41 ttacagggccaatttt-cagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1185698 ttacagggtcaatttttcagacttcacgtatattacatggtcaatttcaattaataa 1185642  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 34083162 - 34083079
Alignment:
Q  179 gatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||| ||||| |||||||||||| || ||||||||    
T  34083162 gatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttttcccggactccataaatttcctagctccgcc 34083079  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 39772906 - 39772991
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| |||| ||||||||||||| ||||||||| ||||  ||||||| |||| |||||||||||||| || ||||||||    
T  39772906 tcgatttatgattgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctagctccgcc 39772991  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 5136252 - 5136327
Alignment:
Q  21 tcagaatacatgttatttaattacagggccaa-ttttcagacttcacgtatattacatggtcaatttcaattaataa 96  Q
    |||||| ||| ||||||||||||||||| ||| |||||||| ||||||||||||||||  |||||||||||||||||    
T  5136252 tcagaagacacgttatttaattacagggtcaatttttcagatttcacgtatattacat-atcaatttcaattaataa 5136327  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 22967475 - 22967399
Alignment:
Q  186 gactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||||||||||||| |||||| || ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  22967475 gactgtttatatattatgtcacatgtgagtttacgattaatttttcgcccaggctccataaatttcctggctccgcc 22967399  T

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Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 40080798 - 40080714
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| ||| | || ||||||||||||| ||||||||| |||   |||||||||||| |||||||||||||| |||||||||||    
T  40080798 tcgatttatgattatttatatattatgtcacatgtgaatttacgtttaattttttgccc-ggctccataaatttcctggctccgcc 40080714  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 27936194 - 27936238
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcg 138  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  27936194 taaattttacttttgttgacaaaatgataaacctattttatttcg 27936238  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 27936261 - 27936346
Alignment:
Q  174 atttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctcc 259  Q
    |||| ||||| ||| |||| ||||||||| ||| |||||||||  ||| ||||||||||||||  |||||||||||| || |||||    
T  27936261 atttggatttatgattgtttatatattatctcacatgtgaatttgcgataaattttttgcccgaactccataaatttccttgctcc 27936346  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 43137311 - 43137356
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  43137311 taaattgtatttttgttgaaaaaatgacaaacctcttttatttcga 43137356  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 16094338 - 16094289
Alignment:
Q  41 ttacagggccaattttcagacttcacgtatattacatggtcaatttcaat 90  Q
    |||||||| ||||||||||||||| | ||||||||  |||||||||||||    
T  16094338 ttacagggtcaattttcagacttcgcatatattactgggtcaatttcaat 16094289  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 37381859 - 37381814
Alignment:
Q  94 taaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    ||||| ||||||||||||||||| |||  |||||||||||||||||    
T  37381859 taaatcgtacttttgttgacaaagtgacgaacctcttttatttcga 37381814  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 22934788 - 22934744
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||||| ||  | ||||||||||||||    
T  22934788 aaattgtacttttgttgacaaaatcatggatctcttttatttcga 22934744  T

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Target: scaffold0154 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 32170 - 32303
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    ||||||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||           ||||||||| ||    
T  32170 atggtcagaatacatgttatttaattatagggtaaattttcaggcttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtattt 32269  T
Q  106 ttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||||||| |||||||||||    
T  32270 ttgttgacaaaatgataaaccttttttatttcga 32303  T

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Target: scaffold0154; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 32296 - 32384
Alignment:
Q  173 tatttcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||  ||| ||| ||||| |||||||||||||||||| |||||||||||    
T  32296 tatttcgatttatgattgtttatatattatgtcataagtgaatttgcgataaa-tttttacccgggctccataaatttcctggctccgcc 32384  T

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Target: scaffold0069 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 18515 - 18644
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||           ||||||||||||    
T  18515 atggtcggaatacatgttatttaattacaggtc-aattttcagacttcacgtatattacgtggtcaatttcaattaataaccctatattaaattgtactt 18613  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||||||||||||||    
T  18614 ttgttgataaaatgataaacctcttttattt 18644  T

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Target: scaffold0069; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 18684 - 18769
Alignment:
Q  177 tcgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||  ||||||||||    
T  18684 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcatggctccgcc 18769  T

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Target: scaffold0002 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 479668 - 479538
Alignment:
Q  17 atggtcagaatacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaa-----------taaattgtactt 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||           ||||||||||||    
T  479668 atggtcagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtactt 479569  T
Q  106 ttgttgacaaaatgataaacctcttttattt 136  Q
    ||||||| |||||||||||| || |||||||    
T  479568 ttgttgataaaatgataaacttcatttattt 479538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 479506 - 479422
Alignment:
Q  178 cgatttttgactgttaatatattatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||| |||||||| ||||||||| ||| ||||||||| ||||  ||||||| |||| |||||||||||||| |||||||||||    
T  479506 cgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgcc 479422  T

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Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 22011 - 21948
Alignment:
Q  199 ttatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||  ||| |||||||||||| ||||||||||||||| |||||||||||    
T  22011 ttatgtcacatgtgaatttgcgataaattttttgcctgggctccataaatttcctggctccgcc 21948  T

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Target: scaffold0178; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 27513 - 27450
Alignment:
Q  199 ttatgtcatatgtgaattcacgagaaattttttgcccgggctccataaattttctggctccgcc 262  Q
    |||||||| |||||||||  ||| |||||||||||| ||||||||||||||| |||||||||||    
T  27513 ttatgtcacatgtgaatttgcgataaattttttgcctgggctccataaatttcctggctccgcc 27450  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 214150 - 214106
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttatttcga 139  Q
    |||||||||||||||||| |||||||  |||||||||||||||||    
T  214150 aaattgtacttttgttgaaaaaatgaagaacctcttttatttcga 214106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 9262 - 9303
Alignment:
Q  95 aaattgtacttttgttgacaaaatgataaacctcttttattt 136  Q
    |||||||||||||||||| |||||||  ||||||||||||||    
T  9262 aaattgtacttttgttgaaaaaatgacgaacctcttttattt 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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