View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1709-Insertion-49 (Length: 427)

Name: NF1709-Insertion-49
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1709-Insertion-49
NF1709-Insertion-49
[»] chr7 (1 HSPs)
chr7 (8-294)||(21830839-21831125)


Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 21830839 - 21831125
Alignment:
Q  8 ccggcttccggtgtttggcagggtgaaatgaggagactgcagaggcaaaggataaccggctattttcataatcatcatcttcatcagaagaagaagctaa 107  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21830839 ccggcttccggtgtttggaagggtgaaaggaggagactgcagaggcaaaggataaccggctatcttcataatcatcatcttcatcagaagaagaagctaa 21830938  T
Q  108 gtcatcggggacggcggtggagagacggttatatgtttcaaagaaatgtaagtcgtcctcgtcgtcgccgaggccgtcccaattcatggtcagcgtcttt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21830939 gtcatcggggacggcggtggagagacggttatatgtttcaaagaaatgtaagtcgtcctcgtcgtcgccgaggccgtcccaattcatggtcagcgttttt 21831038  T
Q  208 cggcgttccatggtggccatcggcggcaggaggttttggaaatggaatggaatacgctatgacaaatatgaaatgtaatggaaaacg 294  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21831039 ctgcgttccatggtggccatcggcggcaggaggttttggaaatggaatggaaaacgctatgacaaatatgaaatgtaatggaaaacg 21831125  T

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