View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1709-Insertion-51 (Length: 291)

Name: NF1709-Insertion-51
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1709-Insertion-51
NF1709-Insertion-51
[»] chr3 (33 HSPs)
chr3 (8-291)||(42093226-42093510)
chr3 (172-291)||(17109847-17109966)
chr3 (171-288)||(46962577-46962694)
chr3 (171-291)||(49500111-49500231)
chr3 (171-287)||(50645744-50645860)
chr3 (171-237)||(27934773-27934839)
chr3 (175-286)||(38807811-38807922)
chr3 (172-291)||(55092475-55092594)
chr3 (173-291)||(32315373-32315491)
chr3 (170-291)||(27934445-27934566)
chr3 (176-287)||(29838294-29838405)
chr3 (173-291)||(14545832-14545951)
chr3 (171-237)||(26582934-26583000)
chr3 (175-237)||(32315697-32315759)
chr3 (174-237)||(52835868-52835930)
chr3 (176-237)||(14546158-14546219)
chr3 (174-291)||(27284968-27285085)
chr3 (171-215)||(33162319-33162363)
chr3 (174-291)||(52835543-52835660)
chr3 (176-226)||(17109747-17109797)
chr3 (171-237)||(55092200-55092266)
chr3 (184-237)||(26582621-26582674)
chr3 (173-291)||(49499840-49499958)
chr3 (173-237)||(46962904-46962968)
chr3 (172-291)||(38807534-38807653)
chr3 (175-237)||(49121714-49121776)
chr3 (173-291)||(29838562-29838680)
chr3 (177-237)||(16056350-16056410)
chr3 (173-237)||(33162642-33162706)
chr3 (174-237)||(50645470-50645533)
chr3 (176-234)||(42093719-42093777)
chr3 (173-237)||(19590435-19590499)
chr3 (177-233)||(21323214-21323270)
[»] chr7 (28 HSPs)
chr7 (171-291)||(19157961-19158081)
chr7 (171-291)||(20757360-20757480)
chr7 (172-290)||(40729332-40729450)
chr7 (173-291)||(44483494-44483612)
chr7 (174-287)||(24354-24467)
chr7 (176-287)||(44219294-44219405)
chr7 (176-291)||(42517135-42517250)
chr7 (176-237)||(13426325-13426386)
chr7 (175-232)||(22364656-22364713)
chr7 (175-291)||(42516866-42516982)
chr7 (174-291)||(34595587-34595704)
chr7 (174-236)||(35026443-35026505)
chr7 (171-237)||(35026766-35026831)
chr7 (174-291)||(13426560-13426677)
chr7 (173-237)||(44483226-44483290)
chr7 (173-232)||(830006-830065)
chr7 (173-232)||(1195186-1195245)
chr7 (176-291)||(34595318-34595434)
chr7 (172-237)||(44219616-44219681)
chr7 (175-237)||(19476717-19476780)
chr7 (171-229)||(40729087-40729145)
chr7 (174-237)||(827096-827160)
chr7 (174-237)||(829107-829171)
chr7 (173-237)||(19476390-19476454)
chr7 (171-226)||(19157690-19157745)
chr7 (171-226)||(20757089-20757144)
chr7 (172-223)||(34487138-34487189)
chr7 (175-216)||(31579440-31579481)
[»] scaffold0817 (2 HSPs)
scaffold0817 (172-291)||(4250-4369)
scaffold0817 (169-291)||(3976-4098)
[»] chr1 (31 HSPs)
chr1 (172-291)||(28031915-28032034)
chr1 (171-291)||(20061793-20061913)
chr1 (173-291)||(50625034-50625150)
chr1 (171-291)||(37172243-37172363)
chr1 (175-291)||(43191655-43191771)
chr1 (172-288)||(42155021-42155136)
chr1 (173-237)||(26244546-26244610)
chr1 (174-291)||(50096401-50096518)
chr1 (175-291)||(39027480-39027596)
chr1 (175-291)||(50096132-50096248)
chr1 (173-228)||(14602339-14602394)
chr1 (171-291)||(20062066-20062186)
chr1 (172-291)||(43191924-43192043)
chr1 (173-291)||(33825-33943)
chr1 (173-291)||(26244817-26244935)
chr1 (173-237)||(39288149-39288213)
chr1 (177-232)||(47829287-47829342)
chr1 (173-291)||(33554-33672)
chr1 (173-237)||(12322089-12322153)
chr1 (175-237)||(12322415-12322478)
chr1 (177-291)||(10914042-10914160)
chr1 (173-237)||(14602007-14602071)
chr1 (169-237)||(18963602-18963670)
chr1 (174-217)||(51999451-51999494)
chr1 (173-287)||(33619168-33619282)
chr1 (172-237)||(47828959-47829024)
chr1 (173-288)||(28031644-28031759)
chr1 (172-226)||(39027678-39027732)
chr1 (173-226)||(50616936-50616989)
chr1 (173-226)||(50624763-50624816)
chr1 (174-291)||(37172516-37172633)
[»] chr2 (39 HSPs)
chr2 (171-291)||(18369008-18369128)
chr2 (171-288)||(28921464-28921581)
chr2 (175-291)||(29683442-29683558)
chr2 (173-288)||(33940678-33940793)
chr2 (172-237)||(2395479-2395544)
chr2 (175-291)||(10748493-10748609)
chr2 (171-291)||(12806817-12806937)
chr2 (172-287)||(14379109-14379224)
chr2 (176-291)||(42705220-42705335)
chr2 (172-288)||(41593947-41594063)
chr2 (177-291)||(4171793-4171907)
chr2 (173-234)||(30432593-30432654)
chr2 (171-284)||(30432870-30432983)
chr2 (175-284)||(41594226-41594335)
chr2 (176-291)||(3948364-3948479)
chr2 (171-237)||(19204915-19204981)
chr2 (171-291)||(7877318-7877439)
chr2 (173-237)||(29683173-29683237)
chr2 (174-229)||(6880000-6880055)
chr2 (176-291)||(3371302-3371417)
chr2 (171-237)||(13572793-13572859)
chr2 (171-237)||(32521798-32521863)
chr2 (172-291)||(37608953-37609071)
chr2 (172-290)||(37609224-37609342)
chr2 (171-237)||(13572467-13572533)
chr2 (174-235)||(17457716-17457777)
chr2 (174-291)||(3371570-3371687)
chr2 (177-237)||(7877647-7877707)
chr2 (175-291)||(6880241-6880357)
chr2 (173-232)||(13278119-13278178)
chr2 (174-237)||(25318616-25318679)
chr2 (175-237)||(14379435-14379497)
chr2 (171-237)||(28921189-28921255)
chr2 (173-291)||(2395154-2395272)
chr2 (172-237)||(18369334-18369399)
chr2 (171-208)||(42704984-42705021)
chr2 (173-237)||(12806545-12806609)
chr2 (175-235)||(38873473-38873533)
chr2 (174-291)||(19204590-19204707)
[»] chr4 (37 HSPs)
chr4 (174-291)||(17865244-17865361)
chr4 (172-291)||(4712446-4712564)
chr4 (172-291)||(37815609-37815729)
chr4 (177-288)||(32592744-32592855)
chr4 (172-237)||(16491968-16492033)
chr4 (174-291)||(13492882-13492999)
chr4 (174-234)||(26314474-26314534)
chr4 (174-237)||(16959761-16959824)
chr4 (173-232)||(22487545-22487604)
chr4 (172-291)||(17107700-17107818)
chr4 (172-237)||(42239395-42239460)
chr4 (173-226)||(46481250-46481303)
chr4 (171-237)||(989397-989463)
chr4 (168-226)||(2184416-2184474)
chr4 (173-291)||(13683001-13683119)
chr4 (184-237)||(13683319-13683372)
chr4 (174-291)||(37815339-37815456)
chr4 (173-237)||(39385179-39385243)
chr4 (177-237)||(989078-989138)
chr4 (173-237)||(5720950-5721014)
chr4 (174-291)||(11021671-11021788)
chr4 (173-237)||(16960086-16960150)
chr4 (174-237)||(46081424-46081487)
chr4 (173-288)||(12792569-12792684)
chr4 (175-225)||(43750279-43750329)
chr4 (171-228)||(46480941-46480998)
chr4 (172-291)||(17107428-17107547)
chr4 (174-291)||(2184662-2184780)
chr4 (173-291)||(43749944-43750062)
chr4 (173-237)||(17864944-17865008)
chr4 (173-224)||(4712176-4712227)
chr4 (176-288)||(9301572-9301682)
chr4 (171-291)||(16491642-16491762)
chr4 (174-237)||(39385484-39385547)
chr4 (177-291)||(11021941-11022055)
chr4 (186-235)||(54208473-54208522)
chr4 (173-237)||(22487217-22487281)
[»] chr6 (30 HSPs)
chr6 (171-291)||(17238302-17238422)
chr6 (172-291)||(26272248-26272367)
chr6 (173-288)||(28853756-28853871)
chr6 (172-291)||(30608862-30608981)
chr6 (174-287)||(8926461-8926574)
chr6 (174-287)||(8936718-8936831)
chr6 (171-284)||(5404845-5404958)
chr6 (171-284)||(5409170-5409283)
chr6 (175-291)||(3345019-3345135)
chr6 (174-291)||(19661348-19661464)
chr6 (171-237)||(5924150-5924216)
chr6 (173-291)||(3485042-3485160)
chr6 (173-237)||(9571718-9571782)
chr6 (174-287)||(16525465-16525578)
chr6 (173-287)||(3345291-3345405)
chr6 (176-237)||(5140690-5140751)
chr6 (174-291)||(30609134-30609251)
chr6 (171-291)||(19661617-19661737)
chr6 (171-291)||(31717170-31717290)
chr6 (174-237)||(33783394-33783457)
chr6 (173-229)||(31717476-31717533)
chr6 (177-237)||(5404601-5404661)
chr6 (174-234)||(17238030-17238090)
chr6 (173-229)||(29819412-29819468)
chr6 (175-237)||(3484782-3484844)
chr6 (175-237)||(5923825-5923887)
chr6 (174-291)||(28853482-28853600)
chr6 (175-291)||(8926186-8926302)
chr6 (175-291)||(8936443-8936559)
chr6 (177-216)||(16525197-16525236)
[»] chr8 (26 HSPs)
chr8 (173-291)||(18764282-18764400)
chr8 (174-291)||(3272988-3273105)
chr8 (173-237)||(6943979-6944043)
chr8 (175-291)||(13154507-13154623)
chr8 (170-288)||(9180316-9180434)
chr8 (177-291)||(13405716-13405830)
chr8 (172-237)||(31402908-31402973)
chr8 (173-237)||(2835415-2835479)
chr8 (174-291)||(26479324-26479440)
chr8 (177-233)||(31186670-31186726)
chr8 (173-237)||(220510-220574)
chr8 (173-237)||(689665-689729)
chr8 (173-237)||(734133-734197)
chr8 (173-237)||(858029-858093)
chr8 (177-232)||(24332585-24332640)
chr8 (175-237)||(6892070-6892132)
chr8 (173-229)||(31685972-31686028)
chr8 (174-237)||(31186372-31186435)
chr8 (171-236)||(3272744-3272809)
chr8 (173-291)||(13154236-13154354)
chr8 (174-233)||(18764611-18764670)
chr8 (172-291)||(6943653-6943772)
chr8 (174-235)||(26479618-26479679)
chr8 (173-287)||(31403185-31403299)
chr8 (173-237)||(9180042-9180106)
chr8 (173-237)||(2835122-2835186)
[»] chr5 (25 HSPs)
chr5 (172-285)||(22394120-22394233)
chr5 (174-287)||(43196899-43197012)
chr5 (176-291)||(3598413-3598528)
chr5 (173-288)||(6497463-6497578)
chr5 (177-291)||(14868941-14869054)
chr5 (172-237)||(24490840-24490905)
chr5 (174-291)||(3598681-3598798)
chr5 (174-291)||(4122577-4122692)
chr5 (174-291)||(10461343-10461460)
chr5 (171-288)||(24491114-24491231)
chr5 (171-291)||(6542254-6542374)
chr5 (173-229)||(5933122-5933178)
chr5 (172-287)||(25329093-25329208)
chr5 (174-235)||(6542582-6542643)
chr5 (173-291)||(15969698-15969811)
chr5 (177-291)||(18786249-18786362)
chr5 (171-291)||(5933393-5933513)
chr5 (171-291)||(10461613-10461733)
chr5 (174-291)||(22394392-22394509)
chr5 (172-291)||(43197169-43197288)
chr5 (177-225)||(41137474-41137522)
chr5 (174-235)||(14868675-14868736)
chr5 (173-291)||(15969427-15969545)
chr5 (174-235)||(40589576-40589637)
chr5 (174-222)||(7133465-7133513)
[»] scaffold0103 (1 HSPs)
scaffold0103 (171-291)||(43272-43392)
[»] scaffold0137 (2 HSPs)
scaffold0137 (173-291)||(36764-36880)
scaffold0137 (172-237)||(37057-37122)
[»] scaffold0170 (1 HSPs)
scaffold0170 (174-291)||(8539-8657)
[»] scaffold0006 (2 HSPs)
scaffold0006 (173-291)||(212409-212527)
scaffold0006 (172-237)||(212734-212799)
[»] scaffold0147 (2 HSPs)
scaffold0147 (172-236)||(25459-25523)
scaffold0147 (171-237)||(25118-25184)
[»] scaffold0045 (2 HSPs)
scaffold0045 (176-233)||(43994-44051)
scaffold0045 (173-237)||(43907-43971)
[»] scaffold0028 (2 HSPs)
scaffold0028 (177-291)||(74182-74295)
scaffold0028 (174-237)||(73931-73994)
[»] scaffold0021 (2 HSPs)
scaffold0021 (174-291)||(118300-118416)
scaffold0021 (176-227)||(118029-118080)
[»] scaffold0126 (2 HSPs)
scaffold0126 (171-234)||(36318-36381)
scaffold0126 (177-215)||(35995-36033)
[»] scaffold0167 (1 HSPs)
scaffold0167 (174-233)||(4713-4772)
[»] scaffold0210 (1 HSPs)
scaffold0210 (190-235)||(14951-14996)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 7e-92; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 8 - 291
Target Start/End: Original strand, 42093226 - 42093510
Alignment:
Q  8 tgttaatcaattaacgatggatggagnnnnnnntatcattgaaagttctcaattaattttatcaagttggtgaaactaattttgacatccactggttaa- 106  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||     
T  42093226 tgttaatcaattaacgatggatggagaaaaaaatatcattgaaagttctcaattaattttatcaagttggtgaaaccaattttgacattcactggttaac 42093325  T
Q  107 atttccctttatattagggtcttgtcagcgaaaaactaattattccaatttgttaagaagctagaaaggcttaaatatgaaaatagtccctgcaaatatc 206  Q
    |||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||    
T  42093326 attttcctttatattagggtcttgttagcgagaaactaactattccaatttgttaagaagctagaaaggcttaaatatgaaaatagtctctcctaatatc 42093425  T
Q  207 tgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttagttttggtccttggta 291  Q
    |||||||||||||||||||||||||||||||       |||||||||  || | |||||||||| ||| |||||| |||||||||    
T  42093426 tgacattttggatttagtccctgtaaaaatatttttttggttttagtctctgcaaatataaaaaatttggttttgatccttggta 42093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 17109847 - 17109966
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||       ||||||||| ||| | ||||||||||     
T  17109847 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaatatttttttggttttagtgcctgcaaatataaaaaa 17109946  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  17109947 tttggttttggtccttggta 17109966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 46962577 - 46962694
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |       ||||||||| ||| | ||||||||||    
T  46962577 aaaggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaaaaattttttggttttagtccctgcaaatataaaaa 46962676  T
Q  271 ttttagttttggtccttg 288  Q
     ||| |||||||||||||    
T  46962677 atttggttttggtccttg 46962694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 49500231 - 49500111
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||       ||||||||| | | | ||||||||||    
T  49500231 aaaggcttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaatatttttttggttttagtccttgcaaatataaaaa 49500132  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  49500131 atttggttttggtccttggta 49500111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 50645860 - 50645744
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||       ||||||||| ||| | ||||||||||    
T  50645860 aaaggcttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaa 50645761  T
Q  271 ttttagttttggtcctt 287  Q
     ||| ||||||||||||    
T  50645760 atttggttttggtcctt 50645744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 27934839 - 27934773
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  27934839 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaata 27934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 38807922 - 38807811
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||       ||||||||| ||| | |||||||||| |||    
T  38807922 gcttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaatatatgtttggttttagtccctgcaaatataaaaaattt 38807823  T
Q  275 agttttggtcct 286  Q
     |||||||||||    
T  38807822 ggttttggtcct 38807811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 55092594 - 55092475
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||       |||||||||  || | ||||||||||     
T  55092594 aaggcttaaatatgaaaatagtccctccaaatatctgacattttggttttattctctgtaaaaatatttttttggttttagtctctgcaaatataaaaaa 55092495  T
Q  272 tttagttttggtccttggta 291  Q
    |||  |||||||||||||||    
T  55092494 tttgattttggtccttggta 55092475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 32315373 - 32315491
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||       | ||||||| | | | |||||| ||| |    
T  32315373 aggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctctgtaaaaatatttttttgattttagtccttgcaaatatagaaaat 32315472  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  32315473 ttggttttggtccttggta 32315491  T

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Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 27934445 - 27934566
Alignment:
Q  170 gaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaa 269  Q
    |||||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||       ||||||||| ||||| |||||| ||    
T  27934445 gaaaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtcccttcaaatatagaa 27934544  T
Q  270 attttagttttggtccttggta 291  Q
      ||| ||||||||||||||||    
T  27934545 tatttggttttggtccttggta 27934566  T

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Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 287
Target Start/End: Original strand, 29838294 - 29838405
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||        ||||||||  || | |||||||||| |||     
T  29838294 cttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttg 29838393  T
Q  276 gttttggtcctt 287  Q
    ||||||||||||    
T  29838394 gttttggtcctt 29838405  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 14545832 - 14545951
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatat-aaaaat 271  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||       | ||||||| ||| | ||||| |||||     
T  14545832 aggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccatgtaaaagtatttttttgattttagtccctgcaaatataaaaaaa 14545931  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  14545932 tttggttttggtccttggta 14545951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 26583000 - 26582934
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  26583000 aaagacttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaata 26582934  T

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Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 32315759 - 32315697
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  32315759 gcttaaatatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaaata 32315697  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 52835930 - 52835868
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||    
T  52835930 ggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagt-cctgtaaaaata 52835868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 14546219 - 14546158
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||| |||| |||||||||||||||||||||||||| || |||| |||||||||||    
T  14546219 cttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaaata 14546158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 27284968 - 27285085
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||| |||| ||||||||||||||||| |||||||  |||||| ||| ||||||||       ||||||||| ||| | |||||| ||  ||    
T  27284968 ggcttaaatatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatatt 27285067  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  27285068 tggttttggtccttggta 27285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 33162319 - 33162363
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacatttt 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  33162319 aaaggcttaaatatgaaaatagtccccgcaaatatctgacatttt 33162363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 52835543 - 52835660
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||| |||| ||||||||||||||||| | |||||  |||||||||| ||||||||       ||||||||| ||| | |||||| ||  ||    
T  52835543 ggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatt 52835642  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  52835643 tggttttggtccttggta 52835660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 17109747 - 17109797
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  17109747 cttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtcc 17109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 55092200 - 55092266
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||| ||||||| || ||||||||    
T  55092200 aaaggcttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctataaaaata 55092266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 26582621 - 26582674
Alignment:
Q  184 tgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| | |||||||||||| ||||||| |||||||||||||||||||    
T  26582621 tgaaaatagtctccgcaaatatctgatattttggttttagtccctgtaaaaata 26582674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 49499840 - 49499958
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||| ||||||||||||   |||||| |||||||||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  49499840 aggcttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatataatat 49499939  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  49499940 ttggttttggtccttggta 49499958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 46962968 - 46962904
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||||||||||||| | | |||| |||||||||| ||||||||    
T  46962968 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaata 46962904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 38807534 - 38807653
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||| |||||||||||||| ||||||| ||||||||| | |||||| ||||| || | ||||||||       ||||||||| ||| | |||||| ||      
T  38807534 aaggtttaaatatgaaaatggtccctgtaaatatctggcgttttggttttagcccttataaaaatatttttttggttttagtccctgcaaatatagaata 38807633  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  38807634 tttggttttggtccttggta 38807653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 49121714 - 49121776
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||||| |||| ||||||||    
T  49121714 gcttaaatatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaata 49121776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 29838680 - 29838562
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| ||||||||||||||||  | |||||| |||||||| | ||||||||       ||||||||| | | | || ||| ||  |    
T  29838680 aggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaatatttttttggttttagtccttgcaaaaatagaatat 29838581  T
Q  273 ttagttttggtccttggta 291  Q
    |||||||||||||||||||    
T  29838580 ttagttttggtccttggta 29838562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 16056350 - 16056410
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||| || | ||||||||||||||||| | |||||| |||||||||| ||||||||    
T  16056350 ttaaatatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaata 16056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 33162706 - 33162642
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||| | ||||||||||| |||| | |||||||||| ||||||||    
T  33162706 aggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaata 33162642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 50645470 - 50645533
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| |||| ||||||||||||||||  | |||||| |||||| ||| ||||||||    
T  50645470 ggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagttcctataaaaata 50645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 42093777 - 42093719
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaa 234  Q
    |||||||||| |||| ||||||||||||||||| | |||||  |||||||||| |||||    
T  42093777 cttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaa 42093719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 19590435 - 19590499
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||  ||| ||||||||||||||| |||||  ||||||| || ||||||||    
T  19590435 aggcttaaatatggaaacggtctctgcaaatatctgacgttttgattttagtcgctataaaaata 19590499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 21323270 - 21323214
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaa 233  Q
    ||||||||| |||| ||||||||||||||||  | |||||| |||||||||| ||||    
T  21323270 ttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaa 21323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 19158081 - 19157961
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||| ||| | ||||||||||    
T  19158081 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaa 19157982  T
Q  271 ttttagttttggtccttggta 291  Q
    |||| ||||||||||||||||    
T  19157981 ttttggttttggtccttggta 19157961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 20757480 - 20757360
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||| ||| | ||||||||||    
T  20757480 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaa 20757381  T
Q  271 ttttagttttggtccttggta 291  Q
    |||| ||||||||||||||||    
T  20757380 ttttggttttggtccttggta 20757360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 40729450 - 40729332
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||     
T  40729450 aaggcttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 40729351  T
Q  272 tttagttttggtccttggt 290  Q
    ||  |||||||||||||||    
T  40729350 ttgggttttggtccttggt 40729332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 44483612 - 44483494
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||| ||||||||||||| |||||||| | ||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||||    
T  44483612 aggcttaaatgtgaaaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaatt 44483513  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||| ||||||    
T  44483512 ttggttttggtcattggta 44483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 287
Target Start/End: Original strand, 24354 - 24467
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| ||    
T  24354 ggcttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 24453  T
Q  274 tagttttggtcctt 287  Q
      ||||||| ||||    
T  24454 gggttttggacctt 24467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 287
Target Start/End: Original strand, 44219294 - 44219405
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||       | ||||||| |||   |||||||||| |||     
T  44219294 cttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttgtttttagtccctataaatataaaaaatttg 44219393  T
Q  276 gttttggtcctt 287  Q
    ||||||||||||    
T  44219394 gttttggtcctt 44219405  T

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Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 42517250 - 42517135
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    ||||||| |||||||| |||| |||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| |||     
T  42517250 cttaaatgtgaaaataatccccgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttg 42517151  T
Q  276 gttttggtccttggta 291  Q
     |||| ||||||||||    
T  42517150 attttagtccttggta 42517135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 13426325 - 13426386
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  13426325 cttaaatatcaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaata 13426386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 22364656 - 22364713
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22364656 gcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaa 22364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 42516866 - 42516982
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| |||||| ||| ||||||||       ||||||||| ||| | |||||| ||  |||    
T  42516866 gcttaaatatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatattt 42516965  T
Q  275 agttttggtccttggta 291  Q
    |||||||||||||||||    
T  42516966 agttttggtccttggta 42516982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 34595704 - 34595587
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||       || |||||| ||| | |||||| ||  ||    
T  34595704 ggcttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggctttagtccctgcaaatatagaatatt 34595605  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  34595604 tggttttggtccttggta 34595587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 35026443 - 35026505
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaat 236  Q
    |||||||||||| |||| ||||||||||| ||||||| |||||| ||||||||||||||||||    
T  35026443 ggcttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaat 35026505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 35026831 - 35026766
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||| | ||||||||||    
T  35026831 aaaggcttaaatatgaaaatagtccctgtaaatat-tgacattttggttttagttcatgtaaaaata 35026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 13426677 - 13426560
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||  ||| ||||||||||||||||||| |||| | |||||||||| ||||||||       ||||||||| ||| | |||||| ||  ||    
T  13426677 ggcttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatt 13426578  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  13426577 tggttttggtccttggta 13426560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 44483226 - 44483290
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||| |||||| |||| ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  44483226 aggctttaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaata 44483290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 830065 - 830006
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  830065 aggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 830006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 1195245 - 1195186
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  1195245 aggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 1195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 34595318 - 34595434
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgac-attttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||||||||||||| | ||||||||||| ||||||| |||| ||||||||||||||       | ||||||| ||| | |||  ||||| |||    
T  34595318 cttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatatttttttgattttagtccctgcaaattaaaaaaattt 34595417  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  34595418 ggttttggtccttggta 34595434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 44219681 - 44219616
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| |||||||||||||||||||||  | |||||| |||| ||||| ||||||||    
T  44219681 aaggcttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaata 44219616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 19476780 - 19476717
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgaca-ttttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||| ||||||||||||| | |||| | |||||| ||||||||||||    
T  19476780 gcttaaatatgaaaatagtccttgcaaatatctgatatttttagttttagttcctgtaaaaata 19476717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 40729087 - 40729145
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||| | |||||||||||    
T  40729087 aaaggcttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtccctg 40729145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 827096 - 827160
Alignment:
Q  174 ggcttaaatatg-aaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||  | |||||||| ||||||||    
T  827096 ggcttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaata 827160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 829107 - 829171
Alignment:
Q  174 ggcttaaatatg-aaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||  | |||||||| ||||||||    
T  829107 ggcttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaata 829171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 19476390 - 19476454
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| |||||||| ||||| || | |||||| |||||||||| ||||||||    
T  19476390 aggcttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaata 19476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 19157690 - 19157745
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||||| |||| ||||||||||||||||| | | |||| ||||||||    
T  19157690 aaaggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 19157745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 20757089 - 20757144
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||||| |||| ||||||||||||||||| | | |||| ||||||||    
T  20757089 aaaggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 20757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 34487138 - 34487189
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttag 223  Q
    ||||||||||||||||||| || |||||||||||||| | |||||| |||||    
T  34487138 aaggcttaaatatgaaaatggttcctgcaaatatctgccgttttggttttag 34487189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 31579440 - 31579481
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttg 216  Q
    |||||||| |||||||||||||| ||||||||||| ||||||    
T  31579440 gcttaaatgtgaaaatagtccctacaaatatctgatattttg 31579481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 4369 - 4250
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||     
T  4369 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 4270  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  4269 tttggttttggtccttggta 4250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 3976 - 4098
Alignment:
Q  169 agaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaa 268  Q
    ||||||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||       ||||||||| |||   |||||| |    
T  3976 agaaaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatataga 4075  T
Q  269 aattttagttttggtccttggta 291  Q
    || ||| ||||||||||||||||    
T  4076 aaatttggttttggtccttggta 4098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 28032034 - 28031915
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||| ||| | |||||||||||    
T  28032034 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaat 28031935  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  28031934 tttggttttggtccttggta 28031915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 20061793 - 20061913
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||    
T  20061793 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 20061892  T
Q  271 ttttagttttggtccttggta 291  Q
     |||  |||||||||||||||    
T  20061893 atttgattttggtccttggta 20061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 50625150 - 50625034
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |       ||||||||| ||| | |||||||||| |    
T  50625150 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaaaa--aatttggttttagtccctgcaaatataaaaaat 50625053  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  50625052 ttggttttggtccttggta 50625034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 37172243 - 37172363
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||       | ||||||| ||||| ||||||||||    
T  37172243 aaaggcttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaatatatttttgattttagtcccttcaaatataaaaa 37172342  T
Q  271 ttttagttttggtccttggta 291  Q
     |||  ||||| |||||||||    
T  37172343 atttgattttgatccttggta 37172363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 43191655 - 43191771
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    |||||||||||||||| |||||||||||||||||| ||||| | |||||||||||||||||||       ||||||||| ||| | ||||||||||  ||    
T  43191655 gcttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaatt 43191754  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  43191755 ggttttggtccttggta 43191771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 42155136 - 42155021
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||       ||||||||| ||| | ||||||||||     
T  42155136 aaggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaata-ttttttggttttagtccctgcaaatataaaaaa 42155038  T
Q  272 tttagttttggtccttg 288  Q
    ||| |||||||||||||    
T  42155037 tttggttttggtccttg 42155021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 26244546 - 26244610
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  26244546 aggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaata 26244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 50096518 - 50096401
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||  |||| ||||||||||       ||||||||| ||| | |||||| ||| ||    
T  50096518 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggtttaggtccgtgtaaaaataattttttggttttagtccctacaaatatagaaaatt 50096419  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  50096418 tggttttggtccttggta 50096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 39027480 - 39027596
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    |||||||| ||||||||||||| | |||||||||||||||||  |||||||||||||||||||       ||||||||| ||| | |||||||||| |||    
T  39027480 gcttaaatgtgaaaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattt 39027579  T
Q  275 agttttggtccttggta 291  Q
     |||||| |||||||||    
T  39027580 ggttttgatccttggta 39027596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 50096132 - 50096248
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||| ||  |||    
T  50096132 gcttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatattt 50096231  T
Q  275 agttttggtccttggta 291  Q
     |||||| |||||||||    
T  50096232 ggttttgatccttggta 50096248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 14602394 - 14602339
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccct 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  14602394 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccct 14602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 20062186 - 20062066
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||       ||||||||| ||| | |||||| ||     
T  20062186 aaaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatagaat 20062087  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  20062086 atttggttttggtccttggta 20062066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 43192043 - 43191924
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||| || |||| || ||||||||| ||||||||||||||| ||| ||||||||       ||||||||||||| | |||||| ||      
T  43192043 aaggcttaaatatgaatatggtccatgtaaatatctggcattttggatttagttcctataaaaatatttttttggttttagttcctgcaaatatagaata 43191944  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  43191943 tttggttttggtccttggta 43191924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 33943 - 33825
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||| ||||||| || || ||||||||||||||||||| |||||||||||||||||||       ||||||| |  ||   |||||||||| |    
T  33943 aggcttaaataagaaaataatctctacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttattctctgtaaatataaaaaat 33844  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  33843 ttggttttggtccttggta 33825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 26244935 - 26244817
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| |||||||       | ||||||| ||| | |||||| ||| |    
T  26244935 aggcttaaatgtgaaaatagttcctgcaaatatctgacattttggttttaatccctgaaaaaatatttttttgattttagtccctgcaaatatagaaaat 26244836  T
Q  273 ttagttttggtccttggta 291  Q
    || |||||| |||||||||    
T  26244835 ttggttttgatccttggta 26244817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 39288149 - 39288213
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||  ||||||| |||||||||||    
T  39288149 aggcttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctgtaaaaata 39288213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 47829342 - 47829287
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  47829342 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagttcctgtaa 47829287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 33554 - 33672
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||| ||  |||||||||||||||||| |||||| |||||||||| ||||||||        ||||||||  || | |||||||||  |    
T  33554 aggcttaaatatgaacatgatccctgcaaatatctgacgttttggttttagtccctataaaaatatttttctagttttagtctctgcaaatataaaatat 33653  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  33654 ttggttttggtccttggta 33672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 12322089 - 12322153
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||    
T  12322089 aggcttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaata 12322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 12322478 - 12322415
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgac-attttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||| | ||||||||||| ||||||| |||| ||||||||||||||    
T  12322478 gcttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaata 12322415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 10914160 - 10914042
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaa----tatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||||||||| ||||||| |    | ||||||||||||| |||||||| ||||||||||       ||||||||| ||| | ||||||| || |    
T  10914160 ttaaatatgaaaatagaccctgcatatgtctgtctgacattttggttttagtccgtgtaaaaatatttttttggttttagtccctgcaaatataacaaat 10914061  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  10914060 ttggttttggtccttggta 10914042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 14602007 - 14602071
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||||||||||||| || ||||| |||||||| | ||||||||    
T  14602007 aggcttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaata 14602071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 18963602 - 18963670
Alignment:
Q  169 agaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| || |||| ||||||||||||||| | | |||||| |||||||||| ||||||||    
T  18963602 agaaaggcttaaatgtggaaatggtccctgcaaatatccggcgttttggttttagtccctataaaaata 18963670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 51999451 - 51999494
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttgg 217  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  51999451 ggcttaaatatgaaaatagtctctgcaaatatctgatattttgg 51999494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 33619282 - 33619168
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||||||||||||||||   |||||| |||||| ||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  33619282 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaatatttttttggttttagtccctacaaatatagaatat 33619183  T
Q  273 ttagttttggtcctt 287  Q
    || ||||||||||||    
T  33619182 ttggttttggtcctt 33619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 47828959 - 47829024
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| ||||  |||||| ||||||  | ||||||||||||||||||| ||||||||    
T  47828959 aaggcttaaatatggaaatgatccctgtaaatatacggcattttggatttagtccctataaaaata 47829024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 28031644 - 28031759
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| ||||||||||||||||| | |||| | |||||||| | ||||| ||       ||||||||| ||| | |||||| ||  |    
T  28031644 aggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccttataaaattatttttttggttttagtccctgcaaatatataatat 28031743  T
Q  273 ttagttttggtccttg 288  Q
    || |||||||||||||    
T  28031744 ttggttttggtccttg 28031759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 39027732 - 39027678
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    |||||||||||||| |||| |||||||||||||| ||| ||||| | ||||||||    
T  39027732 aaggcttaaatatggaaatggtccctgcaaatatttgatattttagttttagtcc 39027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 50616936 - 50616989
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||| |||| ||||||||||||||||| | | |||| ||||||||    
T  50616936 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 50616989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 50624763 - 50624816
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||| |||| ||||||||||||||||| | | |||| ||||||||    
T  50624763 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtcc 50624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 37172633 - 37172516
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||| | || ||||| | ||||||||| | |||||  |||||||||| ||||||||       ||||||||| ||| |||||||| ||  ||    
T  37172633 ggcttaaatatggacatggtcccggtaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcgaatatagaatatt 37172534  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||| ||||||    
T  37172533 tggttttggtctttggta 37172516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 9e-33; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 18369008 - 18369128
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||    
T  18369008 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaa 18369107  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||| ||||||    
T  18369108 atttggttttggtctttggta 18369128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 28921581 - 28921464
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||       ||||||||| ||| | ||||||||||    
T  28921581 aaaggcttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 28921482  T
Q  271 ttttagttttggtccttg 288  Q
     ||| |||||||||||||    
T  28921481 atttggttttggtccttg 28921464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 29683558 - 29683442
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||       ||||||||| ||| | |||||||||| |||    
T  29683558 gcttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattt 29683459  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  29683458 ggttttggtccttggta 29683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 33940678 - 33940793
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||        |||||||||||| | |||||||||| |    
T  33940678 aggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaatatttttttagttttagttcctgcaaatataaaaaat 33940777  T
Q  273 ttagttttggtccttg 288  Q
    || |||||||||||||    
T  33940778 ttggttttggtccttg 33940793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 2395544 - 2395479
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2395544 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 2395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 10748493 - 10748609
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||       ||||||| | ||| | |||||||||| |||    
T  10748493 gcttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaatatttttttggttttaatccctgcaaatataaaaaattt 10748592  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  10748593 ggttttggtccttggta 10748609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 12806937 - 12806817
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||       |||||||||  || | ||||||||||    
T  12806937 aaaggcttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaa 12806838  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  12806837 atttggttttggtccttggta 12806817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 14379109 - 14379224
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||| ||||||     
T  14379109 aaggtttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaa 14379208  T
Q  272 tttagttttggtcctt 287  Q
    ||| ||||||||||||    
T  14379209 tttggttttggtcctt 14379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 42705335 - 42705220
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       |||||||||   | | |||||||||| |||     
T  42705335 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtctctgtaaaaatatttttttggttttagtcagtgcaaatataaaaaatttg 42705236  T
Q  276 gttttggtccttggta 291  Q
    ||||||| ||||||||    
T  42705235 gttttggaccttggta 42705220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 41593947 - 41594063
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||| |||||| |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||       ||||||||||||| | |||||| |||     
T  41593947 aaggtttaaatgtgaaaatagttcctgcaaatatctgatattttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaaaa 41594046  T
Q  272 tttagttttggtccttg 288  Q
    ||| |||||||||||||    
T  41594047 tttggttttggtccttg 41594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 4171907 - 4171793
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||||||       ||||||||| ||  | |||||||||| ||| |    
T  4171907 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctcggtaaaaatatttttttggttttagtcccagcaaatataaaaaatttgg 4171808  T
Q  277 ttttggtccttggta 291  Q
    |||||||||||||||    
T  4171807 ttttggtccttggta 4171793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 30432593 - 30432654
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaa 234  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30432593 aggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 30432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 30432983 - 30432870
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||| ||     
T  30432983 aaaggcttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaat 30432884  T
Q  271 ttttagttttggtc 284  Q
    |||| |||||||||    
T  30432883 ttttggttttggtc 30432870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 41594335 - 41594226
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||  |||    
T  41594335 gcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaatattt 41594236  T
Q  275 agttttggtc 284  Q
     |||||||||    
T  41594235 ggttttggtc 41594226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 3948364 - 3948479
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    |||||||||||||||||||| |||||||| ||||||||||   |||||||||| ||||||||       ||||||||| ||| | |||||||||| |||     
T  3948364 cttaaatatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttg 3948463  T
Q  276 gttttggtccttggta 291  Q
    |||| |||||||||||    
T  3948464 gtttcggtccttggta 3948479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 19204981 - 19204915
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||| |||||||| ||||||||||    
T  19204981 aaaggcttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaaata 19204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 7877318 - 7877439
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata-nnnnnnnggttttagttccttcgaatataaaa 269  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||  | |||| ||||||||||||        ||||||||| ||| | |||||||||    
T  7877318 aaagacttaaatatgaaaatagtccctgcaaatatcatacattttgattgtagttcctgtaaaaatattttttttggttttagtccctgcaaatataaaa 7877417  T
Q  270 attttagttttggtccttggta 291  Q
    | ||| ||||||||||||||||    
T  7877418 aatttggttttggtccttggta 7877439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 29683173 - 29683237
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||| ||||||||||||||||| | |||||| |||||||||| ||||||||    
T  29683173 aggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 29683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 6880000 - 6880055
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  6880000 ggcttaaatatgaaaattgtccctacaaatatctgacattttggttttagtccctg 6880055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 3371302 - 3371417
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    |||||||||| |||| ||||  | ||||||||| | |||||| |||||||||||||||||||       ||||||||||||| | |||||| ||  ||||    
T  3371302 cttaaatatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaatattta 3371401  T
Q  276 gttttggtccttggta 291  Q
    ||||||||||||||||    
T  3371402 gttttggtccttggta 3371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 13572859 - 13572793
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||| |||| ||||||||||||||    
T  13572859 aaaggtttaaatatgaaaatagttcttgcaaatatatgacattttggttttaatccctgtaaaaata 13572793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 32521863 - 32521798
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||||| |||||||||||||||||||    
T  32521863 aaaggcttaaatatgaaaatagttc-tgcaaataattgacattttggttttagtccctgtaaaaata 32521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 37608953 - 37609071
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| ||||||| ||| |||||||       |  |||||| | | | ||||||||||     
T  37608953 aaggcttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactggaaaaataattttttgtgtttagtccttgcaaatataaaaaa 37609051  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  37609052 tttggttttggtccttggta 37609071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 37609342 - 37609224
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||| |||| |||| |||||||||||| | |||||| |||||||||| ||||||||       ||||||||| ||| | |||||| ||      
T  37609342 aaggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaata 37609243  T
Q  272 tttagttttggtccttggt 290  Q
    ||| |||||||||||||||    
T  37609242 tttggttttggtccttggt 37609224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 13572467 - 13572533
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||| | |||||||||| ||||||||    
T  13572467 aaaggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaata 13572533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 17457716 - 17457777
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    ||||||||| | |||||||||||||||||||| ||| ||||||| |||||| ||||||||||    
T  17457716 ggcttaaatgtaaaaatagtccctgcaaatatttgaaattttggttttagttcctgtaaaaa 17457777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 3371687 - 3371570
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||| ||| | | |||||  ||||||||||| ||||||||| |||||||||        |||||||| ||| | |||||||||| ||    
T  3371687 ggcttaaatatgaaaattgtctcagtaaatacgtgacattttggttttagtcccagtaaaaatatttttttagttttagtccctgcaaatataaaaaatt 3371588  T
Q  274 tagttttggtccttggta 291  Q
    | |||||| |||||||||    
T  3371587 tggttttgatccttggta 3371570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 7877707 - 7877647
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| ||||||||||||||||| | |||||| | |||||||| ||||||||    
T  7877707 ttaaatatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaata 7877647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 6880357 - 6880241
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||||||||||  ||||||||| | ||||||||||||||| | ||||||||       |||||||||  || | |||||| ||  |||    
T  6880357 gcttaaatatggaaatagtccctataaatatctggcgttttggatttagtccttataaaaatatttttttggttttagtctctgcaaatatagaatattt 6880258  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  6880257 ggttttggtccttggta 6880241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 13278178 - 13278119
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| | |||||| |||||||    
T  13278178 aggcttaaatataaaaatagtctctgcaaatatttgacattttagttttagttcctgtaa 13278119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 25318679 - 25318616
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| |||| |||| |||||||||||| | |||||| |||||||||| ||||||||    
T  25318679 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaata 25318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 14379497 - 14379435
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| |||| ||||||||||||||||  | |||||| |||||||||| ||||||||    
T  14379497 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaata 14379435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 28921189 - 28921255
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||| |||| |||| ||||||||||||||||||  ||||||  ||||||||| ||||||||    
T  28921189 aaaggcttaactatggaaatggtccctgcaaatatctgatgttttggtattagtccctataaaaata 28921255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 2395154 - 2395272
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| ||| ||||||||||||| | |||||  |||||||||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  2395154 aggcttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatat 2395253  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||| ||||||||||    
T  2395254 ttggttttagtccttggta 2395272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 18369399 - 18369334
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| ||||  | |||||||||||||| | |||||| |||||||||| ||||||||    
T  18369399 aaggcttaaatatggaaatgatacctgcaaatatctggcgttttggttttagtccctataaaaata 18369334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 42704984 - 42705021
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctg 208  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42704984 aaaggcttaaatatgaaaatggtccctgcaaatatctg 42705021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 12806545 - 12806609
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| |||| || |||||| || | ||||||||||||||||| ||||||||    
T  12806545 aggcttaaatatggaaatggtccttgtaaatatttggcgttttggatttagtccctataaaaata 12806609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 38873473 - 38873533
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    ||||||||||| |||| |||||| ||||||||| || |||||| |||||||||| ||||||    
T  38873473 gcttaaatatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaa 38873533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 19204590 - 19204707
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||| |||| |||||||||||||| |  | |||||  |||||||| | ||||||||       ||||||||| ||| | |||||| ||  ||    
T  19204590 ggcttaaatatggaaatggtccctgcaaatatttagcgttttgattttagtccttataaaaatatttttttggttttagtccctgcaaatatagaatatt 19204689  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  19204690 tggttttggtccttggta 19204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 17865361 - 17865244
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| ||    
T  17865361 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 17865262  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||| ||||||    
T  17865261 tggttttggtctttggta 17865244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 4712564 - 4712446
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||       ||||||||| ||| | ||||||||||     
T  4712564 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaata-ttttttggttttagtccctgcaaatataaaaaa 4712466  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  4712465 tttggttttggtccttggta 4712446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 37815729 - 37815609
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata-nnnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||        ||||||||| ||| | ||||||||||    
T  37815729 aaggcttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatataaaaa 37815630  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  37815629 atttggttttggtccttggta 37815609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 32592744 - 32592855
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||       ||||||||| ||| | |||||||||||||| |    
T  32592744 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaatatttttttggttttagtccctgcaaatataaaaattttgg 32592843  T
Q  277 ttttggtccttg 288  Q
    ||||||||||||    
T  32592844 ttttggtccttg 32592855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 16492033 - 16491968
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  16492033 aaggcttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaata 16491968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 13492882 - 13492999
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||       ||||||||| ||| | |||| |||||  |    
T  13492882 ggcttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaaaat 13492981  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||| ||||||    
T  13492982 tggttttggtctttggta 13492999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 26314474 - 26314534
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaa 234  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26314474 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 26314534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 16959761 - 16959824
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  16959761 ggcttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaata 16959824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 22487604 - 22487545
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  22487604 aggcttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaa 22487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 17107818 - 17107700
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||       | ||||||| ||| | ||||||||||     
T  17107818 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagt-catgtaaaaatatttttttgattttagtccctgcaaatataaaaaa 17107720  T
Q  272 tttagttttggtccttggta 291  Q
     ||  |||||||||||||||    
T  17107719 attgattttggtccttggta 17107700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 42239460 - 42239395
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  42239460 aaggtttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctctgtaaaaata 42239395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 46481303 - 46481250
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46481303 aggcttaaatatgaaaatagtccctgcaaatatctaacattttggatttagtcc 46481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 989463 - 989397
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  989463 aaaggcttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaata 989397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 2184416 - 2184474
Alignment:
Q  168 tagaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtcc 226  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  2184416 tagaaaggcttaaatatgaaaatagcctctgcaaatatctgacattttggttttagtcc 2184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 13683001 - 13683119
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||| ||||||||       ||||||||| |||   |||||| ||  |    
T  13683001 aggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatat 13683100  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  13683101 ttggttttggtccttggta 13683119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 13683372 - 13683319
Alignment:
Q  184 tgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13683372 tgaaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaata 13683319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 37815339 - 37815456
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||||       ||||||||| | | | |||||| ||  ||    
T  37815339 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatttttttggttttagtccatgcaaatatagaatatt 37815438  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  37815439 tggttttggtccttggta 37815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 39385179 - 39385243
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||| || |||||||||||    
T  39385179 aggcttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctgtaaaaata 39385243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 989078 - 989138
Alignment:
Q  177 ttaaatatgaaaatagtccctgc-aaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  989078 ttaaatatgaaaatagtccctgccaaatatctgacattttggttttagt-cctgtaaaaata 989138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 5720950 - 5721014
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||    
T  5720950 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 5721014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 11021671 - 11021788
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||| |||||| |||||||||| | |||||| |||||||||| ||||||||       | |||| || ||| | |||||||||  ||    
T  11021671 ggcttaaatatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaatatttttttgattttggtccctgcaaatataaaatatt 11021770  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  11021771 tggttttggtccttggta 11021788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 16960150 - 16960086
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||||||||||||  |||||||| |||||||||| ||||||||    
T  16960150 aggcttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaata 16960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 46081424 - 46081487
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||  ||||||||||||| ||||||||||||||||| | |||||||||| ||||||||    
T  46081424 ggcttaaatcagaaaatagtccctccaaatatctgacatttttgttttagtccctataaaaata 46081487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 12792569 - 12792684
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||||| ||||||||   | |||||||||| |||||||| |||||||||||||||||||       | ||||||| ||| | |||||||||| |    
T  12792569 aggcttaaatataaaaatagttatttcaaatatctgtcattttggttttagtccctgtaaaaatatttttttgattttagtccctgcaaatataaaaaat 12792668  T
Q  273 ttagttttggtccttg 288  Q
    ||  ||||||||||||    
T  12792669 ttgattttggtccttg 12792684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 43750329 - 43750279
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtc 225  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  43750329 gcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 46480941 - 46480998
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccct 228  Q
    |||||||||||||||||||| |||| |||||||||||| | |||||| ||||||||||    
T  46480941 aaaggcttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtccct 46480998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 17107428 - 17107547
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||| |||| ||||||| |||||| || | |||| | |||||||||||| ||||||       ||||||||| ||| | |||||| ||      
T  17107428 aaggcttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaatatttttttggttttagtccctgcaaatatagaata 17107527  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  17107528 tttggttttggtccttggta 17107547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 2184780 - 2184662
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagt-ccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||| |||||| |||| ||||||||||||||||||| |||||| ||||||  ||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  2184780 ggctttaatatggaaatggtccctgcaaatatctgacgttttggttttagtgtcctataaaaatatttttttggttttagtccctgcaaatatagaatat 2184681  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  2184680 ttggttttggtccttggta 2184662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 43749944 - 43750062
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||||||||||||||||   |||||  |||||| ||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  43749944 aggcttaaatatggaaatggtccctgcaaatatctggtgttttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatat 43750043  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  43750044 ttggttttggtccttggta 43750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 17864944 - 17865008
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| |||| |||||||||||| | |||||| |||||||| | ||||||||    
T  17864944 aggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccatataaaaata 17865008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 4712176 - 4712227
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagt 224  Q
    |||||||||||||||||| |||||||||||||| || | |||||| ||||||    
T  4712176 aggcttaaatatgaaaatggtccctgcaaatatttggcgttttggttttagt 4712227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 9301572 - 9301682
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    ||||||||| |||||||||| |||||||||||  ||||||| |||||||| |||||||||||         ||||||| ||||| || ||||||| |||     
T  9301572 cttaaatataaaaatagtcc-tgcaaatatctatcattttg-atttagtctctgtaaaaatatttttttaattttagtcccttcaaacataaaaaatttg 9301669  T
Q  276 gttttggtccttg 288  Q
    |||||||||||||    
T  9301670 gttttggtccttg 9301682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 16491642 - 16491762
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||| |||| || ||||||||| ||||||   |||||| ||| ||||||||       ||||||| | ||| | |||||| ||     
T  16491642 aaaggcttaaatatgaaaatggtccttgtaaatatctggcattttaattttagttcctataaaaatatttttttggttttaatccctgcaaatatagaat 16491741  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  16491742 atttggttttggtccttggta 16491762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 39385547 - 39385484
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| |||| |||||| |||||||||||| |||||  |||| ||||| ||||||||    
T  39385547 ggcttaaatatggaaatggtccctacaaatatctgacgttttgcttttaatccctataaaaata 39385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 11022055 - 11021941
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    |||||||||||||| ||||||| | |||||||| ||||| | |||| ||| ||||||||||       ||||||||| | | | |||||||||| |||      
T  11022055 ttaaatatgaaaatggtccctgtacatatctgatattttcgttttaatccatgtaaaaatatttttttggttttagtccttacaaatataaaaaatttga 11021956  T
Q  277 ttttggtccttggta 291  Q
    |||||||||| ||||    
T  11021955 ttttggtcctcggta 11021941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 54208473 - 54208522
Alignment:
Q  186 aaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    ||||||||||||||||||||    |||||||| |||||||||||||||||    
T  54208473 aaaatagtccctgcaaatatgcctcattttggttttagtccctgtaaaaa 54208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 22487217 - 22487281
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||| |||||||||||   |||||| |||||||| | ||||||||    
T  22487217 aggcttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaata 22487281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 17238422 - 17238302
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||| |||    
T  17238422 aaaggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaa 17238323  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  17238322 atttggttttggtccttggta 17238302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 26272367 - 26272248
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||       ||||||||||||| | ||||||||||     
T  26272367 aaggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaatatatttttggttttagttcctgcaaatataaaaaa 26272268  T
Q  272 tttagttttggtccttggta 291  Q
    |||  |||||||||||||||    
T  26272267 tttgattttggtccttggta 26272248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 288
Target Start/End: Complemental strand, 28853871 - 28853756
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||       ||||||||||||| | |||||||||| |    
T  28853871 aggcttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaat 28853772  T
Q  273 ttagttttggtccttg 288  Q
    || |||||||||||||    
T  28853771 ttggttttggtccttg 28853756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 30608862 - 30608981
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||       ||||||||| ||| | ||||||||||     
T  30608862 aaggcttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 30608961  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  30608962 tttggttttggtccttggta 30608981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 8926574 - 8926461
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| ||    
T  8926574 ggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 8926475  T
Q  274 tagttttggtcctt 287  Q
    | ||||||||||||    
T  8926474 tggttttggtcctt 8926461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 8936831 - 8936718
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| ||    
T  8936831 ggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 8936732  T
Q  274 tagttttggtcctt 287  Q
    | ||||||||||||    
T  8936731 tggttttggtcctt 8936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 5404958 - 5404845
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||       | ||||||| ||| | ||||||||||    
T  5404958 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaa 5404859  T
Q  271 ttttagttttggtc 284  Q
     ||| |||||||||    
T  5404858 atttggttttggtc 5404845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 5409283 - 5409170
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||       | ||||||| ||| | ||||||||||    
T  5409283 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaa 5409184  T
Q  271 ttttagttttggtc 284  Q
     ||| |||||||||    
T  5409183 atttggttttggtc 5409170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 3345019 - 3345135
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||||        |||||||| ||| | |||||||||| |||    
T  3345019 gcttaaatatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaatatttttttcgttttagtccctgcaaatataaaaaattt 3345118  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  3345119 ggttttggtccttggta 3345135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 19661348 - 19661464
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||       ||||||||| ||| | |||||||||| ||    
T  19661348 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaata-ttttttggttttagtccctgcaaatataaaaaatt 19661446  T
Q  274 tagttttggtccttggta 291  Q
    |  |||||||||||||||    
T  19661447 tgattttggtccttggta 19661464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 5924216 - 5924150
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  5924216 aaaggtttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaata 5924150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 3485160 - 3485042
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||       | ||||||| ||| | |||||||||| |    
T  3485160 aggcttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaatatttttttgattttagtccctgcaaatataaaaaat 3485061  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||| ||||||    
T  3485060 ttggttttggtctttggta 3485042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 9571782 - 9571718
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  9571782 aggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaata 9571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 16525578 - 16525465
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||        |||||||| |||   |||||||||| ||    
T  16525578 ggcttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaaatattttttttgttttagtccctgtaaatataaaaaatt 16525479  T
Q  274 tagttttggtcctt 287  Q
    | ||||||||||||    
T  16525478 tggttttggtcctt 16525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 3345405 - 3345291
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||       |||||||||||||   |||||| ||  |    
T  3345405 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagttcctgtaaatatagaacat 3345306  T
Q  273 ttagttttggtcctt 287  Q
    || ||||||||||||    
T  3345305 ttggttttggtcctt 3345291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 5140690 - 5140751
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||||||  |||||||    
T  5140690 cttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctacaaaaata 5140751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 30609251 - 30609134
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||| |||||||||||||||||   |||||| |||||||||| ||||||||       ||||||||| | | | |||||| ||  ||    
T  30609251 ggcttaaatatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccatgcaaatatataatatt 30609152  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  30609151 tggttttggtccttggta 30609134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 19661737 - 19661617
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| |||| |||||||||||| | |||||| |||||||||| ||||||||       | ||||||| ||| | |||||| ||     
T  19661737 aaaggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaat 19661638  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  19661637 atttggttttggtccttggta 19661617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 31717170 - 31717290
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| |||||||||||||| |||| |||||| |||| ||||| ||||||||       ||||||||| | | | |||||| ||     
T  31717170 aaaggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatatagaat 31717269  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  31717270 atttggttttggtccttggta 31717290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 33783394 - 33783457
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| || | | ||||||||||||    
T  33783394 ggcttaaatatgaagatagtccctgcaaatatctgatattttggtttcaattcctgtaaaaata 33783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 31717533 - 31717476
Alignment:
Q  173 aggcttaaatatgaaaa-tagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||    
T  31717533 aggcttaaatgtgaaaaatagtccctgcaaatatctgaaattttggttttagtccctg 31717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 5404601 - 5404661
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||| |||| ||||||||||||||||| |||||||  |||||||||| ||||||||    
T  5404601 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagtccctataaaaata 5404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 17238030 - 17238090
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaa 234  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||| ||||||||||| ||||    
T  17238030 ggcttaaatatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaa 17238090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 29819412 - 29819468
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    ||||||||||||| |||| ||||||||||||||||| | |||||| |||||||||||    
T  29819412 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctg 29819468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 3484782 - 3484844
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| ||||  ||||||||||||||| ||||||||| |||||||  ||||||||||    
T  3484782 gcttaaatatggaaatgatccctgcaaatatctaacattttggttttagtctgtgtaaaaata 3484844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 5923825 - 5923887
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| |||| ||||||||||||||||  | |||||| |||||||||| ||||||||    
T  5923825 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaata 5923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 28853482 - 28853600
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata-nnnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||||| |||| ||| || ||||||| || | |||||| |||||||||||||||||||        ||||||||| ||| | |||||| ||  |    
T  28853482 ggcttaaatatggaaatggtcactacaaatatttggcgttttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatatagaatat 28853581  T
Q  273 ttagttttggtccttggta 291  Q
    |||||||||||||||||||    
T  28853582 ttagttttggtccttggta 28853600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 8926186 - 8926302
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||| ||| | |||||||||| || |||||| |||||||||| ||||||||       ||||||||| ||| | || ||| ||  |||    
T  8926186 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatattt 8926285  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  8926286 ggttttggtccttggta 8926302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 8936443 - 8936559
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||| |||| ||| | |||||||||| || |||||| |||||||||| ||||||||       ||||||||| ||| | || ||| ||  |||    
T  8936443 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatattt 8936542  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  8936543 ggttttggtccttggta 8936559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 16525197 - 16525236
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttg 216  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  16525197 ttaaatatggaaatagtccctgcaaatatctgacgttttg 16525236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 18764282 - 18764400
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||       ||||| ||| ||||| |||||||||| |    
T  18764282 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaatatttttttggtttgagtcccttcaaatataaaaact 18764381  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||| ||||||    
T  18764382 ttggttttggtctttggta 18764400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 3273105 - 3272988
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||       | ||||||| ||| | ||||||||||  |    
T  3273105 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatatttttttgattttagtccctgcaaatataaaaaact 3273006  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  3273005 tggttttggtccttggta 3272988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 6944043 - 6943979
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  6944043 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaata 6943979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 13154623 - 13154507
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttt 274  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||       ||||||||| ||| | ||||||||||  ||    
T  13154623 gcttaaatatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaatt 13154524  T
Q  275 agttttggtccttggta 291  Q
     ||||||||||||||||    
T  13154523 ggttttggtccttggta 13154507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 9180434 - 9180316
Alignment:
Q  170 gaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaa 269  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||       ||||||||| | | | |||||||||    
T  9180434 gaaagacttaaatatgaatataatccctgcaaatatctgacattttggttttaatccctgtaaaaatattgttttggttttagtccttgcaaatataaaa 9180335  T
Q  270 attttagttttggtccttg 288  Q
    | ||| |||||||||||||    
T  9180334 aatttggttttggtccttg 9180316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 13405830 - 13405716
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    |||||| ||||||||||  |||||||||| ||||||||||| |||| ||||||||||||||       ||||||||| ||||| |||||||||| ||| |    
T  13405830 ttaaatgtgaaaatagtttctgcaaatatttgacattttggttttaatccctgtaaaaatatttttttggttttagtcccttcaaatataaaaaatttgg 13405731  T
Q  277 ttttggtccttggta 291  Q
    |||||||||||||||    
T  13405730 ttttggtccttggta 13405716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 31402908 - 31402973
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  31402908 aaggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaaata 31402973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 2835479 - 2835415
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  2835479 aggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaaata 2835415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 26479324 - 26479440
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |       |||||||||  || | |||||||||||||    
T  26479324 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaa-aaaaaattggttttagtcactgcaaatataaaaattt 26479422  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||| ||||||    
T  26479423 tggttttggtcattggta 26479440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 31186726 - 31186670
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaa 233  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31186726 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaa 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 220510 - 220574
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  220510 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 220574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 689665 - 689729
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  689665 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 734133 - 734197
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  734133 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 734197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 858029 - 858093
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  858029 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata 858093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 24332640 - 24332585
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaa 232  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  24332640 ttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgtaa 24332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 6892132 - 6892070
Alignment:
Q  175 gcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||||||| ||| || |||||||||||||||| | |||||||||||||||||||    
T  6892132 gcttaaatatgaaaataatccttgtaaatatctgacattttagttttagtccctgtaaaaata 6892070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 31686028 - 31685972
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||| |||||||||||    
T  31686028 aggcttaaatatgaatatagtccttacaaatatctgacattttggttttagtccctg 31685972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 31186372 - 31186435
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||||    
T  31186372 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata 31186435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 3272744 - 3272809
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaat 236  Q
    ||||||||||||||| ||||  |||||||||||||||| | |||||| |||||||||| |||||||    
T  3272744 aaaggcttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctataaaaat 3272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 13154236 - 13154354
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||||||||||||||||   |||||| |||||||||| ||||||||       ||||||||| ||| | |||||| ||  |    
T  13154236 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatat 13154335  T
Q  273 ttagttttggtccttggta 291  Q
    ||  |||||||||||||||    
T  13154336 ttgattttggtccttggta 13154354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 18764670 - 18764611
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaa 233  Q
    ||||||||||||||||| ||||||||||||||||| | |||||| | |||||||| ||||    
T  18764670 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttatagtccctataaa 18764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 6943653 - 6943772
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||| |||| ||||| |||||||| || | |||||| |||||||||| ||||||||       | ||||||| ||| | |||||| ||      
T  6943653 aaggcttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaata 6943752  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  6943753 tttggttttggtccttggta 6943772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 26479679 - 26479618
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    ||||| |||||| |||| ||||||||||||||||| | |||||| |||||||||| ||||||    
T  26479679 ggctttaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaa 26479618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 31403299 - 31403185
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||||||||||||||||   |||||| |||||| | | ||||||||       ||||||||| ||||| |||||| ||  |    
T  31403299 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcttataaaaatatttttttggttttagtcccttcaaatatagaatat 31403200  T
Q  273 ttagttttggtcctt 287  Q
    || ||||||||||||    
T  31403199 ttggttttggtcctt 31403185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 9180042 - 9180106
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||| ||||||||||||||||| | |||||  |||| | ||| ||||||||    
T  9180042 aggcttaaatatgaaaatggtccctgcaaatatctggcgttttgattttaattcctataaaaata 9180106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 2835122 - 2835186
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||| ||| ||||||||||||||  |||||| ||||||  || ||||||||    
T  2835122 aggcttaaatatggaaatggtctctgcaaatatctgatgttttggttttagtttctataaaaata 2835186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 22394120 - 22394233
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||||||     
T  22394120 aaggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 22394219  T
Q  272 tttagttttggtcc 285  Q
    ||| ||||||||||    
T  22394220 tttggttttggtcc 22394233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 174 - 287
Target Start/End: Original strand, 43196899 - 43197012
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||||||| ||    
T  43196899 ggcttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatt 43196998  T
Q  274 tagttttggtcctt 287  Q
    ||||||||||||||    
T  43196999 tagttttggtcctt 43197012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 3598413 - 3598528
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatttta 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||| | |||||| ||  |||     
T  3598413 cttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttg 3598512  T
Q  276 gttttggtccttggta 291  Q
    ||||||||||||||||    
T  3598513 gttttggtccttggta 3598528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 288
Target Start/End: Complemental strand, 6497578 - 6497463
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||       | ||||||||||| | |||||||||| |    
T  6497578 aggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttgattttagttcctgcaaatataaaaaat 6497479  T
Q  273 ttagttttggtccttg 288  Q
    || |||||| ||||||    
T  6497478 ttggttttgatccttg 6497463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 14869054 - 14868941
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||       ||||||||| ||| | |||||||||| ||| |    
T  14869054 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttggttttagtccctgcaaatataaaaa-tttgg 14868956  T
Q  277 ttttggtccttggta 291  Q
    ||||| |||||||||    
T  14868955 ttttgatccttggta 14868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 24490840 - 24490905
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24490840 aaggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata 24490905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 3598798 - 3598681
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||       ||||||||| ||| | ||||||  || ||    
T  3598798 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataggaaatt 3598699  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  3598698 tggttttggtccttggta 3598681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 4122577 - 4122692
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |       | ||||||| ||| | |||||||||| ||    
T  4122577 ggcttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaaaaa--aaattgattttagtccctgcaaatataaaaaatt 4122674  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  4122675 tggttttggtccttggta 4122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 10461343 - 10461460
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |||||||  ||||||||||         ||||||| ||| | |||||||||| ||    
T  10461343 ggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtctttgtaaaaatattttttttattttagtccctgcaaatataaaaaatt 10461442  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  10461443 tggttttggtccttggta 10461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 24491231 - 24491114
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| ||||||||||  |||||||||||||| |||||||||||||||||||       ||||||||| ||| | |||||| ||     
T  24491231 aaaggcttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaatatttgtttggttttagtccctgcaaatatagaat 24491132  T
Q  271 ttttagttttggtccttg 288  Q
     ||| |||||||||||||    
T  24491131 atttggttttggtccttg 24491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 6542254 - 6542374
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||| || || |||||||||||| ||||||| |||||||| ||||||||||       ||||||||| ||| | ||||||||||    
T  6542254 aaaggcttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaaatatttttttggttttagtccctgcaaatataaaaa 6542353  T
Q  271 ttttagttttggtccttggta 291  Q
     |||  ||||| |||||||||    
T  6542354 atttgattttgatccttggta 6542374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 5933122 - 5933178
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctg 229  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  5933122 aggcttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtccctg 5933178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 25329093 - 25329208
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||  |||||| ||||||||||||        |||||||| ||| | ||||||||||     
T  25329093 aaggtttaaatatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaaatatattttttgttttagtccctacaaatataaaaaa 25329192  T
Q  272 tttagttttggtcctt 287  Q
    |||  |||||||||||    
T  25329193 tttgattttggtcctt 25329208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 6542643 - 6542582
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    |||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  6542643 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaa 6542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 15969811 - 15969698
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||| ||||||||||||||||||||     ||||||||  |||||||||||||||||||       | ||||||| ||| | |||||||||| |    
T  15969811 aggcttaaatgtgaaaatagtccctgcaaat-----acattttgattttagtccctgtaaaaataattttttgattttagtccctgcaaatataaaaaat 15969717  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  15969716 ttggttttggtccttggta 15969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 18786362 - 18786249
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    ||||||||| |||| ||||||||||||||||| | |||||| |||||||||||||||||||       |||||||| |||| | |||||| ||  ||| |    
T  18786362 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttag-tcctgcaaatatagaatatttgg 18786264  T
Q  277 ttttggtccttggta 291  Q
    |||||||||||||||    
T  18786263 ttttggtccttggta 18786249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 5933513 - 5933393
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||||||||||| ||||||| ||||||||  | ||||||||||||| ||| ||||||||        |||||||| ||| | |||||| ||     
T  5933513 aaaggcttaaatatgaaaatggtccctgtaaatatctagcgttttggatttagttcctataaaaatatattttttgttttagtccctgcaaatatagaat 5933414  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  5933413 atttggttttggtccttggta 5933393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 10461733 - 10461613
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||||  |||||||||| ||||||||       ||||||||| ||| | |||||| ||     
T  10461733 aaaggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaat 10461634  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||| ||||||    
T  10461633 atttggttttggtcattggta 10461613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 22394509 - 22394392
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    ||||||||||||||||||||||| | ||||||||  | ||||||||||||| ||| ||||||||       ||||||||| | | | |||||| ||  ||    
T  22394509 ggcttaaatatgaaaatagtcccggtaaatatctagcgttttggatttagttcctataaaaatatttttttggttttagtccatgcaaatatagaatatt 22394410  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  22394409 tggttttggtccttggta 22394392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 43197288 - 43197169
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaat 271  Q
    |||||||||||||| |||| |||||||||||||||||   |||| | |||||||||| ||||||||       | ||||||| ||| | |||||| ||      
T  43197288 aaggcttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaatatttttttgtttttagtccctgcaaatatagaata 43197189  T
Q  272 tttagttttggtccttggta 291  Q
    ||| ||||||||||||||||    
T  43197188 tttggttttggtccttggta 43197169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 41137522 - 41137474
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtc 225  Q
    ||||||||||||||||||||||||||||| ||| ||||| | |||||||    
T  41137522 ttaaatatgaaaatagtccctgcaaatatttgatatttttgttttagtc 41137474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 14868675 - 14868736
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    |||||||||||| |||  |||||| |||||||||| | |||||| |||||||||| ||||||    
T  14868675 ggcttaaatatggaaacggtccctccaaatatctggcgttttggttttagtccctataaaaa 14868736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 15969427 - 15969545
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||| |||| |||| | ||||||| || | |||||| |||||||||| ||||||||       |||||||||  || | |||||| ||  |    
T  15969427 aggcttaaatatggaaatggtccttacaaatatttggcgttttggttttagtccctataaaaatatatttttggttttagtctctgcaaatatagaatat 15969526  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  15969527 ttggttttggtccttggta 15969545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 40589637 - 40589576
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    |||||||||||| |||| ||||||||||||||||| | |||||  |||| ||||| ||||||    
T  40589637 ggcttaaatatggaaatggtccctgcaaatatctggcgttttgcttttaatccctataaaaa 40589576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 7133513 - 7133465
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggattta 222  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||| ||||    
T  7133513 ggcttaaatgtgaaaatagtctccgcaaatatctgatattttggtttta 7133465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 43272 - 43392
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaa 270  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||        |||||||| ||| | ||||||||||    
T  43272 aaaggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaatatattttttgttttagtccctgcaaatataaaaa 43371  T
Q  271 ttttagttttggtccttggta 291  Q
     ||| ||||||||||||||||    
T  43372 atttggttttggtccttggta 43392  T

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Target: scaffold0137 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 36764 - 36880
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||       ||||||||| ||| | |||||||||| |    
T  36764 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctg--aaaatatttttttggttttagtccctgcaaatataaaaaat 36861  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  36862 ttggttttggtccttggta 36880  T

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Target: scaffold0137; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 37122 - 37057
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| |||| ||||||||||||||||  | |||||| |||||||||| ||||||||    
T  37122 aaggcttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaaaata 37057  T

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Target: scaffold0170 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 8539 - 8657
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttgg-atttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    ||||||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||       ||||||||| ||| | |||||||||| |    
T  8539 ggcttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaat 8638  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  8639 ttggttttggtccttggta 8657  T

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Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 212409 - 212527
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaatt 272  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||       ||||| ||| ||| | |||  |||||||    
T  212409 aggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaatatttttttggtttaagtccctgcaaattaaaaaatt 212508  T
Q  273 ttagttttggtccttggta 291  Q
    || ||||||||||||||||    
T  212509 ttggttttggtccttggta 212527  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 212799 - 212734
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||| |||| ||||| | ||||||||||  |||||| |||||||||| ||||||||    
T  212799 aaggcttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaata 212734  T

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Target: scaffold0147 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 25523 - 25459
Alignment:
Q  172 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaat 236  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  25523 aaggcttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccctgtaaaaat 25459  T

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Target: scaffold0147; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 25118 - 25184
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||||||||||| |||||   |||||| |||| |||||| |||||||||| ||||||||    
T  25118 aaaggcttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaata 25184  T

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Target: scaffold0045 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 44051 - 43994
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaa 233  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  44051 cttaaatataaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaa 43994  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 43907 - 43971
Alignment:
Q  173 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    ||||||||||||| |||||||||| ||||||||||| | |||||| |||||||| | ||||||||    
T  43907 aggcttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtccttataaaaata 43971  T

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Target: scaffold0028 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 74295 - 74182
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattttag 276  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| |  |||||||       ||||||||| ||| | |||||||||| ||| |    
T  74295 ttaaatatgaaaatagtccctgcaaatatctaacattttgg-tttagtccttcaaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 74197  T
Q  277 ttttggtccttggta 291  Q
     ||||||||||||||    
T  74196 ctttggtccttggta 74182  T

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Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 73931 - 73994
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaata 237  Q
    |||||||||||| |||| ||||||||||||||| | | |||||| |||| ||||| ||||||||    
T  73931 ggcttaaatatggaaatggtccctgcaaatatccggcgttttggttttattccctataaaaata 73994  T

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Target: scaffold0021 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 118416 - 118300
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaaatannnnnnnggttttagttccttcgaatataaaaattt 273  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||| ||| |||||||||||||||       |||||||||  || | |||||||||| ||    
T  118416 ggcttaaatatgaaaattatcc-tgcaaatatctgatattttggttttcgtccctgtaaaaatatttttttggttttagtcactgcaaatataaaaaatt 118318  T
Q  274 tagttttggtccttggta 291  Q
    | ||||||||||||||||    
T  118317 tggttttggtccttggta 118300  T

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Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 118029 - 118080
Alignment:
Q  176 cttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccc 227  Q
    |||||||||| |||| ||||||| ||||||||| | ||||||||||||||||    
T  118029 cttaaatatggaaatggtccctgtaaatatctggcgttttggatttagtccc 118080  T

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Target: scaffold0126 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 36381 - 36318
Alignment:
Q  171 aaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaaa 234  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||| |||||    
T  36381 aaaggcttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaa 36318  T

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Target: scaffold0126; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 35995 - 36033
Alignment:
Q  177 ttaaatatgaaaatagtccctgcaaatatctgacatttt 215  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  35995 ttaaatatgaatatagttcctgcaaatatctgacatttt 36033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 4772 - 4713
Alignment:
Q  174 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtccctgtaaa 233  Q
    |||||||||||| |||| |||||||||||||| |||| |||||| |||||||||| ||||    
T  4772 ggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaa 4713  T

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Target: scaffold0210 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14996 - 14951
Alignment:
Q  190 tagtccctgcaaatatctgacattttggatttagtccctgtaaaaa 235  Q
    |||||||||||||||| |  |||||||| |||||||||||||||||    
T  14996 tagtccctgcaaatatgtctcattttggttttagtccctgtaaaaa 14951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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