View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17093_high_25 (Length: 292)
Name: NF17093_high_25
Description: NF17093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17093_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 1583128 - 1583207
Alignment:
| Q |
198 |
gttttgtcctttccaaacgcatgcaatcatatgatagacattggtagtatt----aatttatcttcattcaagttctgtg |
273 |
Q |
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| T |
1583128 |
gttttgtcctttccaaacgcatgcaatcatatgatagacattggtaatattattaattttatcttcattcaagttatgtg |
1583207 |
T |
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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1582986 - 1583023
Alignment:
| Q |
1 |
tatataaataaatagtttgatagcttttgtcgaatgac |
38 |
Q |
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| T |
1582986 |
tatataaataaatagtttgataacttttgtcgaatgac |
1583023 |
T |
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