View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17093_high_26 (Length: 290)
Name: NF17093_high_26
Description: NF17093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17093_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 289
Target Start/End: Original strand, 13299256 - 13299518
Alignment:
| Q |
16 |
gaaaccacctttcctattagcccaatgtgatccacgtactgccatgcaacttccagaacagacgagaacctaactctttgtctattgatccatcttacac |
115 |
Q |
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| T |
13299256 |
gaaaccacctttctcattagcccaatgtgatccacgtactgccatgcaacttccagaacagacgagaacctaactctttgtctattgatccatcttacac |
13299355 |
T |
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| Q |
116 |
tatgccatcacattcacatcacatgtgcctcttaaataaatccacccatatcatcacccatcatttttgtatcaaaattcctttctgttacaaagtttat |
215 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13299356 |
tatgccatc-----------acatgtgcctcttaaataaatccacccatatcatcacccatcatttttgtatcaaaattcctttctgttacaaagtttat |
13299444 |
T |
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| Q |
216 |
ttagttccgtgctagctctagagggtttaaaagaccgattattttatcgtatggttttaaattgcagtctgcaa |
289 |
Q |
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|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
13299445 |
ttagttgattgctagctctagagggtttaaaataccgattattttatcgtatggttttaaattgcagtctgcaa |
13299518 |
T |
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