View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17093_high_3 (Length: 567)

Name: NF17093_high_3
Description: NF17093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17093_high_3
NF17093_high_3
[»] chr6 (11 HSPs)
chr6 (20-542)||(14102095-14102609)
chr6 (263-542)||(11421337-11421611)
chr6 (284-444)||(12173469-12173629)
chr6 (257-428)||(23895611-23895782)
chr6 (257-352)||(10259850-10259945)
chr6 (261-356)||(23110286-23110381)
chr6 (257-457)||(18420573-18420776)
chr6 (257-425)||(22066315-22066482)
chr6 (259-429)||(17512217-17512385)
chr6 (257-413)||(23884514-23884669)
chr6 (260-302)||(12415086-12415128)
[»] chr1 (12 HSPs)
chr1 (18-244)||(5378633-5378859)
chr1 (257-542)||(26906132-26906412)
chr1 (257-542)||(5378310-5378591)
chr1 (17-156)||(12301443-12301582)
chr1 (257-542)||(21633602-21633881)
chr1 (257-424)||(40999034-40999202)
chr1 (257-425)||(14272016-14272183)
chr1 (257-317)||(30676810-30676870)
chr1 (265-355)||(28310080-28310170)
chr1 (261-334)||(15810074-15810146)
chr1 (257-413)||(14281894-14282049)
chr1 (391-457)||(15809945-15810008)
[»] chr3 (21 HSPs)
chr3 (18-244)||(7784216-7784442)
chr3 (257-457)||(24794511-24794712)
chr3 (257-356)||(32877889-32877988)
chr3 (257-428)||(28367648-28367819)
chr3 (257-428)||(28375466-28375637)
chr3 (257-428)||(28383288-28383459)
chr3 (257-336)||(7784095-7784174)
chr3 (257-356)||(17529928-17530027)
chr3 (257-356)||(54624674-54624773)
chr3 (257-426)||(4951615-4951784)
chr3 (257-413)||(38529187-38529343)
chr3 (259-428)||(28351715-28351884)
chr3 (257-356)||(48978689-48978784)
chr3 (257-356)||(48988229-48988324)
chr3 (257-413)||(5385712-5385867)
chr3 (417-538)||(7783882-7783995)
chr3 (257-425)||(46305572-46305738)
chr3 (177-244)||(4361721-4361788)
chr3 (257-429)||(23487063-23487236)
chr3 (257-302)||(4361634-4361679)
chr3 (30-78)||(36936942-36936990)
[»] chr8 (24 HSPs)
chr8 (22-216)||(24096287-24096481)
chr8 (18-166)||(9419362-9419510)
chr8 (261-555)||(15833976-15834267)
chr8 (257-470)||(7789032-7789244)
chr8 (257-428)||(20714091-20714262)
chr8 (446-542)||(24095983-24096079)
chr8 (257-429)||(20030201-20030372)
chr8 (283-413)||(24096085-24096216)
chr8 (38-162)||(15543477-15543599)
chr8 (257-429)||(20044840-20045011)
chr8 (257-429)||(42712172-42712343)
chr8 (257-423)||(31575411-31575576)
chr8 (283-359)||(24634015-24634091)
chr8 (257-425)||(18143427-18143594)
chr8 (257-429)||(12767653-12767826)
chr8 (283-425)||(12915506-12915648)
chr8 (257-314)||(25037135-25037191)
chr8 (257-314)||(25051172-25051228)
chr8 (257-425)||(12925376-12925543)
chr8 (257-413)||(18251851-18252006)
chr8 (257-413)||(18883170-18883325)
chr8 (365-425)||(20714424-20714484)
chr8 (283-428)||(33601768-33601913)
chr8 (283-423)||(33592134-33592274)
[»] chr2 (12 HSPs)
chr2 (391-542)||(29911316-29911463)
chr2 (18-194)||(14272957-14273132)
chr2 (257-542)||(14273226-14273506)
chr2 (257-428)||(31710461-31710632)
chr2 (254-427)||(18578704-18578877)
chr2 (257-428)||(24022737-24022908)
chr2 (257-356)||(1800512-1800611)
chr2 (257-356)||(22632421-22632520)
chr2 (257-356)||(1791018-1791113)
chr2 (257-426)||(35877538-35877706)
chr2 (257-426)||(35885027-35885195)
chr2 (257-426)||(36724740-36724908)
[»] scaffold0482 (1 HSPs)
scaffold0482 (257-470)||(3555-3767)
[»] chr7 (13 HSPs)
chr7 (257-428)||(15174562-15174733)
chr7 (254-457)||(7593025-7593227)
chr7 (254-402)||(19352610-19352758)
chr7 (258-429)||(32818019-32818189)
chr7 (257-425)||(14634776-14634943)
chr7 (75-161)||(14617236-14617322)
chr7 (257-425)||(14644476-14644643)
chr7 (257-425)||(33292175-33292342)
chr7 (257-429)||(9736968-9737139)
chr7 (257-413)||(11634340-11634495)
chr7 (257-425)||(15947371-15947538)
chr7 (257-349)||(4306632-4306723)
chr7 (502-542)||(32818263-32818303)
[»] chr5 (25 HSPs)
chr5 (257-428)||(22489207-22489378)
chr5 (257-542)||(42732460-42732742)
chr5 (257-428)||(24412850-24413021)
chr5 (257-428)||(30454196-30454367)
chr5 (258-428)||(30459254-30459424)
chr5 (257-425)||(18569061-18569229)
chr5 (257-428)||(24422299-24422470)
chr5 (257-356)||(5600599-5600698)
chr5 (257-356)||(5610245-5610344)
chr5 (257-356)||(31150702-31150801)
chr5 (257-423)||(30444829-30444995)
chr5 (257-424)||(4635967-4636134)
chr5 (261-336)||(22118190-22118265)
chr5 (257-428)||(11223398-11223567)
chr5 (311-426)||(37514856-37514971)
chr5 (75-161)||(17712895-17712981)
chr5 (257-425)||(13815371-13815538)
chr5 (257-425)||(33955498-33955665)
chr5 (283-425)||(20036046-20036188)
chr5 (284-429)||(26652667-26652812)
chr5 (284-429)||(26924252-26924397)
chr5 (261-353)||(16110907-16110999)
chr5 (254-305)||(1693784-1693835)
chr5 (465-542)||(26652878-26652953)
chr5 (465-542)||(26924463-26924538)
[»] chr4 (15 HSPs)
chr4 (257-428)||(37059108-37059279)
chr4 (259-424)||(15842897-15843062)
chr4 (257-428)||(3242282-3242453)
chr4 (257-428)||(26812530-26812701)
chr4 (257-428)||(26821997-26822168)
chr4 (257-356)||(23622938-23623037)
chr4 (257-425)||(54689911-54690079)
chr4 (257-425)||(54699342-54699510)
chr4 (257-425)||(3918088-3918256)
chr4 (275-356)||(45609486-45609567)
chr4 (257-316)||(16489947-16490006)
chr4 (80-128)||(1349753-1349801)
chr4 (177-244)||(18125617-18125684)
chr4 (257-302)||(18125530-18125575)
chr4 (257-429)||(50516492-50516663)
[»] scaffold0040 (2 HSPs)
scaffold0040 (257-424)||(10064-10230)
scaffold0040 (257-428)||(30818-30989)
[»] scaffold0269 (1 HSPs)
scaffold0269 (257-356)||(14881-14980)
[»] scaffold0247 (1 HSPs)
scaffold0247 (257-356)||(24612-24711)
[»] scaffold0028 (2 HSPs)
scaffold0028 (257-425)||(94429-94597)
scaffold0028 (257-425)||(103870-104038)
[»] scaffold0021 (2 HSPs)
scaffold0021 (257-356)||(100002-100101)
scaffold0021 (257-429)||(124069-124240)
[»] scaffold0001 (1 HSPs)
scaffold0001 (258-428)||(408351-408521)
[»] scaffold0206 (1 HSPs)
scaffold0206 (257-429)||(2131-2302)
[»] scaffold0223 (1 HSPs)
scaffold0223 (257-353)||(27127-27223)
[»] scaffold0101 (1 HSPs)
scaffold0101 (257-305)||(42085-42133)


Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 542
Target Start/End: Original strand, 14102095 - 14102609
Alignment:
Q  20 tgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtgagt 119  Q
    ||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14102095 tgattttaaccataatccacttttaagtgcaaatatcataatctttttatctataacacactccagctcataacagatttgtggatcacatattctgagt 14102194  T
Q  120 gttttcatatcatcataccctcaaacccgagttaagtgtaaatccgatctcaaacccatctcatcatataaagtgaatcgt-gttctgaagtctattcat 218  Q
    || || || ||||||||||||||||| |||||| ||||||||| ||||| |||||||||||| ||||  |||||| || ||  |||| |||||||| |      
T  14102195 gtgtttatttcatcataccctcaaacacgagttgagtgtaaattcgatcccaaacccatctc-tcatgcaaagtgtattgtaattcttaagtctatccca 14102293  T
Q  219 aaaaatagtttgagaaagaattgtaagatttatagtgatgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctag 318  Q
    || ||||||||||||||||||||||  | |     || ||||||| ||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||    
T  14102294 aacaatagtttgagaaagaattgtagaagt----ctgctgaggttaataatacagggtgtaacaggctgatctgttgtgatcaagaccttacagtgctag 14102389  T
Q  319 tcaaaattttatgttagctgga-tactatagtggataatatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcattt 417  Q
    |||||| ||| |||||||  ||  ||||||||||||||| ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||    |    
T  14102390 tcaaaagtttctgttagcaagacaactatagtggataatctcacaagaggtgtggggactggaagtagccgggtttggtgaaccaggataattcttcagt 14102489  T
Q  418 gttattcttcttccctttctctttttatttaaagttacactatatatacacacataatcacaatcatactaatatttatgaatttctccataatattctt 517  Q
    ||||||||||||||||||||| |||||||||| | |||||   |||||||||||  |||||| ||||| |||||||||| ||  |||| | |||||||||    
T  14102490 gttattcttcttccctttctc-ttttatttaaggctacac--aatatacacacactatcacactcatattaatatttattaa--tctctagaatattctt 14102584  T
Q  518 gttctaattaatcacaaccaaatta 542  Q
    |  ||||||||||||||||||||||    
T  14102585 gccctaattaatcacaaccaaatta 14102609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 263 - 542
Target Start/End: Complemental strand, 11421611 - 11421337
Alignment:
Q  263 tgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgta 362  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||| |||||| ||||| |  |||||||||||||||||| ||  |    
T  11421611 tgataatacatggtgtaacagactgatctggtgtgatcaagatcttatagtgttagtcagaattttttgttaacatgatactatagtggataatctcaca 11421512  T
Q  363 gaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttacactatat 462  Q
      ||||||| ||| |||||||| |||  |||| ||||| | ||||| | || | ||||||| ||||||| ||||||||||||||| ||||||||    ||    
T  11421511 cgaggtgtggggactggaagtagccggatttgatgaactaggataattatcttgtgttattgttcttccatttctctttttattt-aagttaca--tgat 11421415  T
Q  463 atacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||||||  |||||| ||||| |||||||||| ||  |||||| |||||| | || ||||||||||||||||||||||    
T  11421414 atacacacactatcacactcatattaatatttattaa--tctccagaatattatggtactaattaatcacaaccaaatta 11421337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 444
Target Start/End: Original strand, 12173469 - 12173629
Alignment:
Q  284 actgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaagt 383  Q
    |||||||||||||||||||||| |||| |||||||||| || ||| |||||||  |||||||||||||||||| |   | |||||||| ||| || ||||    
T  12173469 actgatctggtgtgatcaagaatttatggtgctagtcataagtttctgttagcatgatactatagtggataatcttacacaaggtgtggggactgaaagt 12173568  T
Q  384 aaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctcttttta 444  Q
    | ||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  12173569 agccgagtttggtgaactatgataaatctcaggtgttattcttcttccctttctctcttta 12173629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 23895782 - 23895611
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  23895782 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 23895684  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  23895683 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 23895611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 10259945 - 10259850
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtgga 352  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||| | ||||| |||||||||||||||    
T  10259945 tgaggtttataatacagggtgtaacggactgatctggtgtgatcaagaatttatagtgctagtcagaagtttctcttagcaggatactatagtgga 10259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 23110381 - 23110286
Alignment:
Q  261 gttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||  |||||||| ||||| ||||||||||||||||||  |||||||||||||| || ||| ||||||| | |||||||||||||||||    
T  23110381 gttgataatattgggtgtaatagacttatctggtgtgatcaagaacatatagtgctagtcagaagtttctgttagccgaatactatagtggataat 23110286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 457
Target Start/End: Original strand, 18420573 - 18420776
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  |  |||||||||||| || ||| |||||||  | | ||||||||| ||||    
T  18420573 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatttgttagtgctagtcagaagtttctgttagcaagaaaactatagtgtataa 18420671  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct---tccctttctctttttatttaaagt 452  Q
    | ||  |  ||||||  ||| |||||||| ||| |||| |||||||| ||||| | || | ||||||||||||   || || ||||| ||||||||||||    
T  18420672 tctcacacgaggtgtcgggactggaagtagccgggttttgtgaaccaggataactatcctgtgttattcttctctctctctctctctctttatttaaagt 18420771  T
Q  453 tacac 457  Q
    |||||    
T  18420772 tacac 18420776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Original strand, 22066315 - 22066482
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||| ||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  22066315 tgaggttgataatacagtg-gttacggactgatctagtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 22066413  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  22066414 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 22066482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 429
Target Start/End: Complemental strand, 17512385 - 17512217
Alignment:
Q  259 aggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatat 358  Q
    ||||||||||||||||||   |||||||||||| ||||||||||||  |||||||| | || | || ||| |   | ||| ||||||||||||||||| |    
T  17512385 aggttgataatacagggtt--acagactgatctagtgtgatcaagactttatagtgttggttagaagtttctaccaactgtatactatagtggataatct 17512288  T
Q  359 cgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
    |  |  | ||||| ||| || ||||| ||| ||||||||||||| ||||| |||  | |||||||||||||    
T  17512287 cacaagaagtgtggggactgaaagtagccgagtttggtgaaccaggataactcttctgtgttattcttctt 17512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 23884514 - 23884669
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| ||||||||||||| |||    
T  23884514 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggacaat 23884612  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| ||||    
T  23884613 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctc 23884669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 12415086 - 12415128
Alignment:
Q  260 ggttgataatacagggtgtaacagactgatctggtgtgatcaa 302  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||    
T  12415086 ggttaataatacagagtgtaacggactgatctggtgtgatcaa 12415128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 5378859 - 5378633
Alignment:
Q  18 attgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtga 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||     
T  5378859 attgattttaaccataatccacttttaagtgcaaatatcataatctcttcatctataacacactctagctcataacagatttgtggatcacatattctgc 5378760  T
Q  118 gtgttttcatatcatcataccctcaaacccgagttaagtgtaaatccgatctcaaacccatctcatcatataaagtgaatcgt-gttctgaagtctattc 216  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||| ||||| |||||| || ||  |||| |||||||| |    
T  5378759 gtgtgttcatatcatcataccctcaaacacgagttgagtgtaaattcgatcccaaacccatctc-tcatacaaagtgtattgtaattcttaagtctatcc 5378661  T
Q  217 ataaaaatagtttgagaaagaattgtaa 244  Q
     |||  ||||||||||||||||||||||    
T  5378660 gtaacgatagtttgagaaagaattgtaa 5378633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 257 - 542
Target Start/End: Complemental strand, 26906412 - 26906132
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| || ||| ||||| |  |||| |||| ||||||||    
T  26906412 tgaggttgataatacagagtgtaacagactgatctggtgtgaccaagaacttatagtgctagtcagaagtttctgttaacaagatattataatggataat 26906313  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttaca 456  Q
     ||  |  |||| || ||| | |||||| ||  ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  26906312 ctcacacgaggtatggggactagaagtagcctggtttggtgaaccaggataaatctcgtgtgttattcttcttccctttctctttttatttaaa-ttaca 26906214  T
Q  457 ctatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |    |||||||||| ||||||||||||| |||||||||| ||| | |||| |||||||| || ||||||||||||||||||||||    
T  26906213 c----tatacacacacaatcacaatcatattaatatttattaatctttccagaatattctggtcctaattaatcacaaccaaatta 26906132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 257 - 542
Target Start/End: Complemental strand, 5378591 - 5378310
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||||| | || ||| |||||||  ||  ||||||||||||||    
T  5378591 tgaggtttataatatagggtgtaacagactgatctggtgtgatcaagaccttatagtgctagttagaagtttctgttagcaagacaactatagtggataa 5378492  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttac 455  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||||||||| |||    
T  5378491 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataattctcctgtgttattcttcttccctttctc-ttttatttaaagctac 5378393  T
Q  456 actatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    | || |||||||||||  |||||| ||||| |||||||||| ||  |||||| |||||||| ||  |||||||||||||||||||||    
T  5378392 a-ta-atatacacacactatcacactcatattaatatttattaa--tctccagaatattctggtcttaattaatcacaaccaaatta 5378310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 12301443 - 12301582
Alignment:
Q  17 aattgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtg 116  Q
    |||||||||| ||||| ||  |||||||||||||||||||||||||||||| ||| ||| |||||| |   || ||||||||||||||||| ||||| ||    
T  12301443 aattgatttttaccatgatccacttttaagtgcaaatatcataatctcttcttctttaatacactctaaaccacaacagatttgtggatcacatattctg 12301542  T
Q  117 agtgttttcatatcatcataccctcaaacccgagttaagt 156  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  12301543 agtgtgttcatatcatcataccctcaaacacgagttaagt 12301582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 257 - 542
Target Start/End: Original strand, 21633602 - 21633881
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||||  |||  | |||||||||||||||| |||||  ||||| ||||||||| || ||| |  |||  | |||||||||||||||||    
T  21633602 tgaggttgataatacagt-tgttccggactgatctggtgtgaccaagaccttataatgctagtcagaagtttctactagtagaatactatagtggataat 21633700  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttaca 456  Q
     ||  | || ||||| ||| | || ||| ||| |||||||||||||  |||  | || | ||||||||||||||||||||||||||||||| ||||||||    
T  21633701 ctcacaaaaagtgtggggactagacgtagccgggtttggtgaaccagaatatttatcttgtgttattcttcttccctttctctttttattt-aagttaca 21633799  T
Q  457 ctatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |   ||| |||||||  |||||| ||||| |||||||||| ||  |||||| |||||||| || ||||||||||||||||||||||    
T  21633800 c--aatacacacacactatcacactcatattaatatttattaa--tctccagaatattctagtcctaattaatcacaaccaaatta 21633881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 424
Target Start/End: Complemental strand, 40999202 - 40999034
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| |  ||||||||||||||| || |||  ||||||  ||  ||||||||||||||    
T  40999202 tgaggttgataatacatggtgtaacaaactgatctggtgtgatcaaaaccttatagtgctagtcataagtttccgttagcaagacaactatagtggataa 40999103  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattc 424  Q
    | ||  |  ||||||| ||| |||||||   || ||||||||||||| ||||| ||| || ||||||||    
T  40999102 tctcacacgaggtgtggggactggaagttgtcgggtttggtgaaccaggataactcttatgtgttattc 40999034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 14272183 - 14272016
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  14272183 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgtttgttagaagtttctaccaactgcatactatagtggataat 14272085  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  14272084 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14272016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 30676810 - 30676870
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgcta 317  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||    
T  30676810 tgagattgataatacagagtgtaacagactgatcttgtgtgatcaagaacatatagtgcta 30676870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 355
Target Start/End: Complemental strand, 28310170 - 28310080
Alignment:
Q  265 ataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataa 355  Q
    |||||||||  |||||| |||||||||||||||||||| || |||||||| || ||  || ||| || |||| ||||||||||||||||||    
T  28310170 ataatacagactgtaacggactgatctggtgtgatcaacaacttatagtgttattcggaagtttttgatagcaggatactatagtggataa 28310080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 15810146 - 15810074
Alignment:
Q  261 gttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgtta 334  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||| ||| || ||| |||||    
T  15810146 gttgataatacagg-tgtaacggactgatctggtgtgatcaagaccttatagtgctactcagaagtttctgtta 15810074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 14282049 - 14281894
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  14282049 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgtttgttagaagtttctaccaactgcatactatagtggataat 14281951  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| ||||    
T  14281950 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctc 14281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 457
Target Start/End: Complemental strand, 15810008 - 15809945
Alignment:
Q  391 tttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttacac 457  Q
    |||||||||||| ||||| |||| | ||||||| ||||   || |||||||||||||||||||||||    
T  15810008 tttggtgaaccaggataattctcttgtgttattattct---ctctctctttttatttaaagttacac 15809945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 4e-61; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 7784442 - 7784216
Alignment:
Q  18 attgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtga 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  7784442 attgattttaaccataatccacttttaagtgcaaatatcataatctcttcatctataacacactccatctcataacagatttgtggatcaaatattgtga 7784343  T
Q  118 gtgttttcatatcatcataccctcaaacccgagttaagtgtaaatccgatctcaaacccatctcatcatataaagtgaatcgt-gttctgaagtctattc 216  Q
    |||| ||||||| |||||||||||||||   |||| ||||||||| ||||| ||||||||| ||| ||||  ||||| || ||  |||| |||||||| |    
T  7784342 gtgtgttcatattatcataccctcaaacaatagttgagtgtaaattcgatcccaaacccatttca-cataccaagtgtattgtaattcttaagtctatcc 7784244  T
Q  217 ataaaaatagtttgagaaagaattgtaa 244  Q
     |||  ||||||||||||||||||||||    
T  7784243 gtaacgatagtttgagaaagaattgtaa 7784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 257 - 457
Target Start/End: Complemental strand, 24794712 - 24794511
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  24794712 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 24794614  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct-tccctttctctttttatttaaagtta 454  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||||| || || ||||| ||||||||||||||    
T  24794613 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctctctctctctctctttatttaaagtta 24794514  T
Q  455 cac 457  Q
    |||    
T  24794513 cac 24794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 32877889 - 32877988
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| || ||| || |||||| ||||  ||||||||||||||||||    
T  32877889 tgaggttgataatacagagtgtaacagactgatctggtgtgatcaacaaattatagtgttattcagaagtttatgatagcatgatactatagtggataat 32877988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 28367819 - 28367648
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  28367819 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 28367721  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  28367720 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 28367648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 28375637 - 28375466
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  28375637 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 28375539  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  28375538 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 28375466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 28383459 - 28383288
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  28383459 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 28383361  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  28383360 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 28383288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 7784174 - 7784095
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| || ||| |||||||    
T  7784174 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaccttatagtgttagtcataagtttctgttagc 7784095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 17530027 - 17529928
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  17530027 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 17529928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 54624674 - 54624773
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  54624674 tgaggttgataatacagagtgtaacagactgatctggtatgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 54624773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 4951615 - 4951784
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| |  || |||||||||||| || ||| |||||||  ||  | ||||||||||||    
T  4951615 tgaggttgataatacagg-tgtaacagactgatctggtgtgaccaataccttgtagtgctagtcagaaatttctgttagcaagacaaatatagtggataa 4951713  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattctt 426  Q
    | ||  |  ||||||||||| | ||||||  || ||||||||||||| ||||| |||||| ||||||||||    
T  4951714 tctcacacgaggtgtgaggacttgaagtagtcgagtttggtgaaccaagataactctcatgtgttattctt 4951784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 38529343 - 38529187
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||  ||||||||||||||| || ||| |||||||  ||  ||||||||||||||    
T  38529343 tgaggttgataatacaag-tgtaacagactcatctggtgtgatcaagatcttatagtgctagtcagaaatttctgttagcaagacaactatagtggataa 38529245  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
    | ||  |  ||||||| | | |||||||| ||| ||||||||||| ||||||| ||||    
T  38529244 tctcacacgaggtgtgggcactggaagtagccgggtttggtgaactatgataactctc 38529187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 259 - 428
Target Start/End: Complemental strand, 28351884 - 28351715
Alignment:
Q  259 aggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataata 357  Q
    ||||||||||||||| | || || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  | | |||||||||||||||     
T  28351884 aggttgataatacagag-gttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataatc 28351786  T
Q  358 tcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    ||  |  ||||||| ||| |||||||| ||| |||||||||||||  |||| |||| | ||||||||||||    
T  28351785 tcacacgaggtgtggggactggaagtagccgggtttggtgaaccagcataactctcctgtgttattcttct 28351715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 48978689 - 48978784
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| |    | ||||||||||||||||||||    
T  48978689 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttct----gatggatactatagtggataat 48978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 48988229 - 48988324
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| |    | ||||||||||||||||||||    
T  48988229 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttct----gatggatactatagtggataat 48988324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 5385712 - 5385867
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||| |||||| | || ||| |||||||||||||||||||||  |||||||| | || | || ||| | | ||||| |||||||||||||||||    
T  5385712 tgaggttgatgatacagtg-gttacatactgatctggtgtgatcaagaccttatagtgttggttagaagtttctatcagctgtatactatagtggataat 5385810  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| ||||    
T  5385811 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctc 5385867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 538
Target Start/End: Complemental strand, 7783995 - 7783882
Alignment:
Q  417 tgttattcttcttccctttctctttttatttaaagttacactatatatacacacataatcacaatcatactaatatttatgaatttctccataatattct 516  Q
    |||||||||||||||||||||||||  |||||||| ||||| ||| | ||||||   |||||| ||||  |||||||||| |||  ||||| ||||||||    
T  7783995 tgttattcttcttccctttctcttt--atttaaagctacacaatacacacacact--atcacactcat--taatatttattaat--ctccagaatattct 7783904  T
Q  517 tgttctaattaatcacaaccaa 538  Q
     || ||||||||||||||||||    
T  7783903 ggtcctaattaatcacaaccaa 7783882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 46305738 - 46305572
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||| ||||||||||    
T  46305738 tgaggttgataatacagtg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactaaagtggataat 46305640  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||   ||| ||||| ||| |||||||| ||| ||||| ||||||| ||||| |||| | |||||||||    
T  46305639 ctcaacgaa-gtgtggggactggaagtagccgggtttgatgaaccaagataactctcctgtgttattct 46305572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 4361788 - 4361721
Alignment:
Q  177 atctcatcatataaagtgaatcgtgttctgaagtctattcataaaaatagtttgagaaagaattgtaa 244  Q
    ||||||| ||| |||||  || ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  4361788 atctcattatacaaagtttattgtgttcttaagtctattcgtaacaatagtttgagaaagaattgtaa 4361721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 23487063 - 23487236
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||| || || |||||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  23487063 tgaggttgataatacaagg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataat 23487161  T
Q  357 atcgtagaaggtgtgagga--atggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  |  |||| |||   |||||||||||| | ||||||||||| ||||| |||| | |||||||||||||    
T  23487162 ctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttctt 23487236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 4361679 - 4361634
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaa 302  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  4361679 tgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaa 4361634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 36936942 - 36936990
Alignment:
Q  30 cataatatacttttaagtgcaaatatcataatctcttcatctataacac 78  Q
    ||||||| ||||||| ||| ||||||| |||||||||||||| ||||||    
T  36936942 cataatacacttttaggtgaaaatatcgtaatctcttcatctttaacac 36936990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 24096481 - 24096287
Alignment:
Q  22 attttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtgagtgt 121  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||| ||||||||||||||  ||||||||| |||||||||||||| |||||||||||||    
T  24096481 attttaaccataatccacttttacgtgcaaatatcacaatctcttaatctataacacactatagctcataatagatttgtggatcacatattgtgagtgt 24096382  T
Q  122 tttcatatcatcataccctcaaacccgagttaagtgtaaatccgatctcaaacccatctcatcatataaagtgaatcgtgttctgaagtctattc 216  Q
     || ||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||||| | |||||||||| ||||||||||    
T  24096381 gtttatagcatcataccctcaaacacgagttgagtgtaaatccgatcacaaacccatctcgtcatataaagggtatcgtgttctcaagtctattc 24096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 9419362 - 9419510
Alignment:
Q  18 attgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtga 117  Q
    ||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  9419362 attgattttaaccataattcattttcaagtgcaaatatcataatctcttcatctataacacactccagctcataagagattcgtggatcacatattgtga 9419461  T
Q  118 gtgttttcatatcatcataccctcaaacccgagttaagtgtaaatccga 166  Q
    |||| |||||||||||| |||||||||| |||||| |||||||||||||    
T  9419462 gtgtgttcatatcatcacaccctcaaacacgagttgagtgtaaatccga 9419510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 261 - 555
Target Start/End: Original strand, 15833976 - 15834267
Alignment:
Q  261 gttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcg 360  Q
    ||||||||||||||| |||||  ||| ||||||| || ||||||| ||||||||||||||| || |||  ||||||  ||||||||| |||||||| ||     
T  15833976 gttgataatacagggagtaacgaacttatctggtatggtcaagaacttatagtgctagtcagaagtttcagttagcatgatactataatggataatctca 15834075  T
Q  361 tagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttacactat 460  Q
     |  ||||||| ||| || ||||| |||  |||||||||||| |||||||||| | ||||||  ||||||||||||||||||| ||||| ||||||||||    
T  15834076 cacgaggtgtgtggactgaaagtagccggatttggtgaaccaagataaatctcttgtgttataattcttccctttctctttttgtttaa-gttacactat 15834174  T
Q  461 atatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaattatttcaaagttctg 555  Q
     || |||||||  |||||||||||| || ||||||| ||| |||| | |||||||| || |||||||||||||||||||||| | || |||||||    
T  15834175 ttacacacaca--atcacaatcatattattatttattaatctctctagaatattctagtactaattaatcacaaccaaattaatccatagttctg 15834267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 257 - 470
Target Start/End: Complemental strand, 7789244 - 7789032
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||| || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  7789244 tgaggttgataatacagag-gttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagacaactatagtggataa 7789146  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttac 455  Q
    | ||  |  ||||||| ||| |||||||| ||| |||||||||||||  |||| |||| | |||||||||||||| ||||||| |||||||||||| |||    
T  7789145 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccagaataattctcctgtgttattcttcttctctttctc-ttttatttaaagctac 7789047  T
Q  456 actatatatacacac 470  Q
    || ||||| ||||||    
T  7789046 acaatatacacacac 7789032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 20714091 - 20714262
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||| || ||| |||||||  ||  |||||| |||||||    
T  20714091 tgaggttgataatacagg-tgtaacagactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactataatggataa 20714189  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||||| ||||||||||||    
T  20714190 tgtcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcatgtgttattcttct 20714262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 446 - 542
Target Start/End: Complemental strand, 24096079 - 24095983
Alignment:
Q  446 ttaaagttacactatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||| ||| || |||||||| || ||||||||||||||||||||||    
T  24096079 ttaaagttacactacatacacacacaaaatcacaatcatactaatatttattaatctcttcagaatattctggtcctaattaatcacaaccaaatta 24095983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 20030201 - 20030372
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||||||  || | ||||||||||||||||||||||  |||||||| | || | || |||||   | ||| |||||||||||||||||    
T  20030201 tgaggttgataatacagggatta-cggactgatctggtgtgatcaagaccttatagtgttggttagaagtttataccaactgtatactatagtggataat 20030299  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||||||    
T  20030300 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctt 20030372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 413
Target Start/End: Complemental strand, 24096216 - 24096085
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgt-gaggaatggaa 381  Q
    ||||||| |||||| |||||||| || ||||||||||||||| |||||||||||  |||||||||||||||||| ||  |  |||||| | ||| |||||    
T  24096216 gactgatatggtgtaatcaagaacttgtagtgctagtcaaaagtttatgttagcaagatactatagtggataatctcacacgaggtgtgggggactggaa 24096117  T
Q  382 gtaaccgtgtttggtgaaccatgataaatctc 413  Q
    |||  || |||||||||||||  |||||||||    
T  24096116 gtagtcgagtttggtgaaccagaataaatctc 24096085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 38 - 162
Target Start/End: Original strand, 15543477 - 15543599
Alignment:
Q  38 acttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtgagtgttttcatatcatcatac 137  Q
    |||||||||||||||||||| ||| ||||||||| || |||||| |||||||||||   ||||| |||||  | || | || || |||||||||| ||||    
T  15543477 acttttaagtgcaaatatcacaatttcttcatctttatcacactgcagctcataac--ttttgtagatcacgtgttctaagcgtgttcatatcattatac 15543574  T
Q  138 cctcaaacccgagttaagtgtaaat 162  Q
    |||||||| ||||| ||||||||||    
T  15543575 cctcaaacgcgagtcaagtgtaaat 15543599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 20044840 - 20045011
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| ||||||| |||||||||    
T  20044840 tgaggttgataatacaggg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactatcgtggataat 20044938  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||| ||| ||| ||||||||||||| ||||| |||||| |||||||||||||    
T  20044939 ctcacacgaagtgtggggactggatgtagccgggtttggtgaaccaggataactctcatgtgttattcttctt 20045011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 429
Target Start/End: Complemental strand, 42712343 - 42712172
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  42712343 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 42712245  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||||||    
T  42712244 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctt 42712172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 423
Target Start/End: Complemental strand, 31575576 - 31575411
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||||| ||    ||||||| ||||||||||||||  ||||||||||||| | || ||| |  |||||| |||||||||||||||||    
T  31575576 tgaggttgataatacaggg-gttctggactgatttggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagtggataat 31575478  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttatt 423  Q
     ||  |  | ||||| ||| |||||||| |||  |||||||||||| ||||| |||| | |||||||    
T  31575477 ctcacacgaagtgtggggactggaagtagccggatttggtgaaccaggataactctcttgtgttatt 31575411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 24634015 - 24634091
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatc 359  Q
    ||||||||||||||||||||||  ||||||||||||| | || ||| |  |||||| ||||||||||||||||||||    
T  24634015 gactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagtggataatatc 24634091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 18143594 - 18143427
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||| || || |||||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| || ||||||||||||||    
T  18143594 tgaggttgataatacaagg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttttaccaactgaatgctatagtggataat 18143496  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| |||  |||||||||||| ||||| |||| | |||||||||    
T  18143495 ctcacacgaagtgtggggactggaagtagccggatttggtgaaccaagataactctcctgtgttattct 18143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 12767653 - 12767826
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  12767653 tgaggttgataatacaggg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataat 12767751  T
Q  357 atcgtagaaggtgtgagga--atggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  |  |||| |||   |||||||||||| | ||||||||||| ||||| |||| | |||||||||||||    
T  12767752 ctcacacgaaatgtggggactgtggaagtaaccgggattggtgaaccaggataactctcctgtgttattcttctt 12767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 425
Target Start/End: Original strand, 12915506 - 12915648
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaag 382  Q
    ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| ||||||||||||||||| ||  |  | ||||| ||| ||||||    
T  12915506 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataatctcacacgaagtgtggggactggaag 12915605  T
Q  383 taaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    || ||| ||||||||||||| ||||| |||| | |||||||||    
T  12915606 tagccgggtttggtgaaccaggataactctcctgtgttattct 12915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 25037191 - 25037135
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtg 314  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||  ||||||||    
T  25037191 tgaggttgataatacagag-gttacagactgatctggtgtgatcaagactttatagtg 25037135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 25051228 - 25051172
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtg 314  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||  ||||||||    
T  25051228 tgaggttgataatacagag-gttacagactgatctggtgtgatcaagacattatagtg 25051172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 425
Target Start/End: Original strand, 12925376 - 12925543
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  12925376 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 12925474  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| ||||||||  || |||| |||||||| ||||| |||| | |||||||||    
T  12925475 ctcacacgaagtgtggggactggaagtagtcgggtttcgtgaaccaggataactctcctgtgttattct 12925543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 413
Target Start/End: Original strand, 18251851 - 18252006
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||| ||||||| ||||||||||||| ||||||||| | || | || ||| ||  | ||| |||||||||||||||||    
T  18251851 tgaggttgataatacagag-gttacaaactgatcgggtgtgatcaagacgttatagtgttggttagaagtttctgccaactgaatactatagtggataat 18251949  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| |||  ||||||||| || ||||| ||||    
T  18251950 ctcacacgaagtgtggggactggaagtagccggatttggtgaatcaggataactctc 18252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 18883325 - 18883170
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | |||  | |||||||||||||||||||||  |||||||| | || | |||||| |   | ||| |||||||||||||||||    
T  18883325 tgaggttgataatacagagggtacga-actgatctggtgtgatcaagactttatagtgttggttagaattttctaccaactgaatactatagtggataat 18883227  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| |||  |||||||||||| ||||| ||||    
T  18883226 ctcacacgaagtgtggggactggaagtagccggatttggtgaaccaggataactctc 18883170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 20714424 - 20714484
Alignment:
Q  365 aggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||||| |||||||||    
T  20714424 aggtgtggggactggaagtagccgggtttggtgaaccaggataactctcatgtgttattct 20714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 428
Target Start/End: Complemental strand, 33601913 - 33601768
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaag 382  Q
    ||||||||| ||||||||||||  |||||||| | |||| || ||| ||| | ||| | ||||||||||||||| ||  |  | ||||| ||| ||||||    
T  33601913 gactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 33601814  T
Q  383 taaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    || |||  || ||||||||| ||||| |||| | ||||||| ||||    
T  33601813 tagccggattgggtgaaccaggataactctcctgtgttatttttct 33601768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 423
Target Start/End: Complemental strand, 33592274 - 33592134
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaag 382  Q
    ||||||||| ||||||||||||  |||||||| | |||| || ||| ||| | ||| | ||||||||||||||| ||  |  | ||||| ||| ||||||    
T  33592274 gactgatctagtgtgatcaagaccttatagtgttggtcagaagtttctgtcaactgaaaactatagtggataatctcacacgaagtgtggggactggaag 33592175  T
Q  383 taaccgtgtttggtgaaccatgataaatctcatttgttatt 423  Q
    || |||  || ||||||||| ||||| |||| | |||||||    
T  33592174 tagccggattgggtgaaccaggataactctcctgtgttatt 33592134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 391 - 542
Target Start/End: Original strand, 29911316 - 29911463
Alignment:
Q  391 tttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttacactatatatacacacataatcacaatcatactaat 490  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||||||||    
T  29911316 tttggttaaccatgataaatctcatgtgttattcttcttccctttctctttttatttaaagttacactatat----acacacaatcacaatcatactaat 29911411  T
Q  491 atttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||| ||| ||||||||||||| |||| ||||||||||||||||||||||    
T  29911412 atttattaatctctccataatattgttgtcctaattaatcacaaccaaatta 29911463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 14272957 - 14273132
Alignment:
Q  18 attgattttaaccataatatacttttaagtgcaaatatcataatctcttcatctataacacactccagctcataacagatttgtggatcatatattgtga 117  Q
    |||||||||||||||| |   ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  14272957 attgattttaaccatagtccgcttttaaatgcaaatatcataatatctttatctataacacactccagctcataacagatttgtggatcacatattctga 14273056  T
Q  118 gtgttttcatatcatcataccctcaaacccgagttaagtgtaaatccgatctcaaacccatctcatcatataaagtg 194  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| |  || |||||||||||| ||||| ||||||    
T  14273057 gtgtgttcatatcatcataccctcaaacacgagttgagtgtaaattccgtcccaaacccatctc-tcatacaaagtg 14273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 257 - 542
Target Start/End: Original strand, 14273226 - 14273506
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    |||||||||||||| ||| |||||||||||||| ||||||||| ||||  ||||||||||||||| || ||| |||||||  || | |||||||||||||    
T  14273226 tgaggttgataatatagg-tgtaacagactgatatggtgtgattaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataa 14273324  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttac 455  Q
    | ||  |  |||||||  || || ||||| ||| ||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||||||||| |||    
T  14273325 tctcacacgaggtgtggagactgaaagtagccgggtttggtgaaccaggataattctcgtgtgttattcttcttccctttctc-ttttatttaaagctac 14273423  T
Q  456 actatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    ||   |||||||||||  |||||  ||||| |||||||||| ||  | |||| |||||||| || ||||| ||||||||||||||||    
T  14273424 ac--aatatacacacactatcacgctcatattaatatttattaa--tatccagaatattctggtcctaatcaatcacaaccaaatta 14273506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 31710632 - 31710461
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||| || ||| |||||||  ||  ||||||||||||||    
T  31710632 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataa 31710534  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||| | ||||| |||||| ||||||||||||    
T  31710533 tctcacacgaggtgtggggactggaagtagccgggtttggtgaacaaggataactctcatgtgttattcttct 31710461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 254 - 427
Target Start/End: Original strand, 18578704 - 18578877
Alignment:
Q  254 tgatgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggat 353  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||| |||||||||| ||| ||||||  ||||| ||  ||| ||    
T  18578704 tgatgaggttgataatacagggtgtaacagattggtctggtgttatcaagaacttatagtcctagtcaaaagtttctgttaggaggatattactgtgaat 18578803  T
Q  354 aatatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttc 427  Q
    ||| ||  | |||||||| ||| || |||||  || ||||| |||||   |||||||||||| |||||||||||    
T  18578804 aatctcacacaaggtgtggggactgaaagtagtcgggtttgatgaacatggataaatctcatgtgttattcttc 18578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 24022908 - 24022737
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||| || ||| |||||||  ||  ||||||||||||||    
T  24022908 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataa 24022810  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| | | |||||||| ||| ||||||||||| | ||||| ||||   ||||||||||||    
T  24022809 tctcacacgaggtgtgggaattggaagtagccgggtttggtgaacgaggataactctccaatgttattcttct 24022737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 1800512 - 1800611
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  1800512 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 1800611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 22632421 - 22632520
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  |||||||| |||||| || ||| || |||| |||||||||||||||||||    
T  22632421 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgttagtcagaagtttctgatagcaggatactatagtggataat 22632520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 1791018 - 1791113
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| |    | ||||||||||||||||||||    
T  1791018 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttct----gatggatactatagtggataat 1791113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 35877538 - 35877706
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  35877538 tgaggttgataatacagtg-gttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 35877636  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattctt 426  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||    
T  35877637 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 35877706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 35885027 - 35885195
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  35885027 tgaggttgataatacagtg-gttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 35885125  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattctt 426  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||    
T  35885126 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 35885195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 36724740 - 36724908
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  36724740 tgaggttgataatacagtg-gttacgaactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 36724838  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattctt 426  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||    
T  36724839 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctatgttattctt 36724908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 257 - 470
Target Start/End: Original strand, 3555 - 3767
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||| || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  3555 tgaggttgataatacagag-gttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagacaactatagtggataa 3653  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagttac 455  Q
    | ||  |  ||||||| ||| |||||||| ||| |||||||||||||  |||| |||| | |||||||||||||| ||||||| |||||||||||| |||    
T  3654 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccagaataattctcctgtgttattcttcttctctttctc-ttttatttaaagctac 3752  T
Q  456 actatatatacacac 470  Q
    || ||||| ||||||    
T  3753 acaatatacacacac 3767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 15174562 - 15174733
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  15174562 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatcttgtagtgctagtcagaagtttttgttagcaagaaaactatagtggataa 15174660  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| |||||||||| | ||||||||||||    
T  15174661 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataaatctcctgtgttattcttct 15174733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 254 - 457
Target Start/End: Original strand, 7593025 - 7593227
Alignment:
Q  254 tgatgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtgga 352  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  | | |||||| ||||    
T  7593025 tgatgaggttgataatacagg-tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactataatgga 7593123  T
Q  353 taatatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttcttccctttctctttttatttaaagt 452  Q
    |||| ||  |  ||||||| ||| |||||||| ||  ||||||||||||| ||||| |||| | ||||||||||| || || ||||| ||||||||||||    
T  7593124 taatctcacacgaggtgtggggactggaagtagccaggtttggtgaaccaggataactctcttgtgttattcttc-tctctctctctctttatttaaagt 7593222  T
Q  453 tacac 457  Q
    |||||    
T  7593223 tacac 7593227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 254 - 402
Target Start/End: Complemental strand, 19352758 - 19352610
Alignment:
Q  254 tgatgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggat 353  Q
    |||||||||| ||||||||||||||||| ||  ||||||||||||||| ||| ||||||| | ||||| || ||| ||||||| ||| ||||||||||||    
T  19352758 tgatgaggttcataatacagggtgtaacggaaagatctggtgtgatcaggaatttatagtacaagtcagaagtttctgttagcaggagactatagtggat 19352659  T
Q  354 aatatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaacca 402  Q
    ||| ||  |  | ||||||||| |||||||| |||  ||||||||||||    
T  19352658 aatctcacacgaagtgtgaggactggaagtagccgaatttggtgaacca 19352610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 429
Target Start/End: Original strand, 32818019 - 32818189
Alignment:
Q  258 gaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataata 357  Q
    |||||||||||||||||| || |||||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||     
T  32818019 gaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataatc 32818117  T
Q  358 tcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
    ||  |  | ||||| |||  ||||||| ||| ||||||||||||| ||||| |||| | |||||||||||||    
T  32818118 tcacacgaagtgtggggaccggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttctt 32818189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 14634943 - 14634776
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   ||||| |||||||||||||||||    
T  14634943 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccagctgcatactatagtggataat 14634845  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  14634844 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 14617236 - 14617322
Alignment:
Q  75 acacactccagctcataacagatttgtggatcatatattgtgagtgttttcatatcatcataccctcaaacccgagttaagtgtaaa 161  Q
    |||||||||||||| ||||| |||||||||||| ||||| | ||||| |||||||||||||| ||| ||||  ||||| ||||||||    
T  14617236 acacactccagctcgtaacatatttgtggatcacatattctaagtgtgttcatatcatcatatccttaaacatgagtttagtgtaaa 14617322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 14644643 - 14644476
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  14644643 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 14644545  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  14644544 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 14644476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 33292342 - 33292175
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  33292342 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 33292244  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  33292243 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 33292175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 9736968 - 9737139
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||||||  || |||||||||||||||||||||||   |||||||| | || | || ||| |   | ||| |||||||| ||||||||    
T  9736968 tgaggttgataatacaggggcta-cagactgatctggtgtgatcaaggccttatagtgttggttagaagtttctacaaactgaatactataatggataat 9737066  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||||||| ||| |||| |||||||| ||||| |||| | |||||||||||||    
T  9737067 ctcacacgaagtgtggggactggaagtagccgggtttagtgaaccaggataactctcctgtgttattcttctt 9737139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 11634495 - 11634340
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||| ||||||| ||||||||||||| ||||||||| | || | || ||| ||  | ||| |||||||||||||||||    
T  11634495 tgaggttgataatacagag-gttacaaactgatcgggtgtgatcaagacgttatagtgttggttagaagtttctgccaactgaatactatagtggataat 11634397  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctc 413  Q
     ||  |  | ||||| ||| |||||||| |||  |||||||||||| ||||| ||||    
T  11634396 ctcacacgaagtgtggggactggaagtagccggatttggtgaaccaggataactctc 11634340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 15947538 - 15947371
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  15947538 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 15947440  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | |||||  || |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  15947439 ctcacacgaagtgtggtgactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 15947371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 4306723 - 4306632
Alignment:
Q  257 tgaggttgataatacagggtgtaa-cagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagt 349  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||| ||   ||||||||| ||| || ||| || ||| |||||||||||||    
T  4306723 tgaggttgataatacagagtgtaatcggactgatctggtgtgatcaacaa--catagtgctattcataagtttctgatagttggatactatagt 4306632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 32818263 - 32818303
Alignment:
Q  502 tctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||| |||||||| || ||||||||||||||||||||||    
T  32818263 tctccagaatattctggtcctaattaatcacaaccaaatta 32818303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 22489207 - 22489378
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||| || ||| |||||||  ||  ||||||||||||||    
T  22489207 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatcttatagtgctagtcataagtttctgttagcaagacaactatagtggataa 22489305  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  22489306 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 22489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 257 - 542
Target Start/End: Complemental strand, 42732742 - 42732460
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||||| ||    ||||||||||||||||||||||  ||||||||||||| | || ||| |  |||||| |||||||||||||||||    
T  42732742 tgaggttgataatacaggg-gttctggactgatctggtgtgatcaagaccttatagtgctagttagaagtttctactagctgaatactatagtggataat 42732644  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct-----tccctttctct-ttttatttaaa 450  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||     || || ||||| ||||||||       
T  42732643 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctttctctctctatctctcttttattt--- 42732547  T
Q  451 gttacactatatatacacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
     ||||| || |||||||||||  |||||| ||||| |||||||||| ||  |||||| |||||||| || ||||||||||||||||||||||    
T  42732546 -ttaca-ta-atatacacacactatcacactcatattaatatttattaa--tctccagaatattctggtcctaattaatcacaaccaaatta 42732460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 24412850 - 24413021
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  24412850 tgaggttgataatacagag-gttacagactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 24412948  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| |||  |||||||||||| ||||| |||| | ||||||||||||    
T  24412949 tctcacacgaggtgtggggactggaagtagccggatttggtgaaccaggataactctcctgtgttattcttct 24413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 30454367 - 30454196
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  30454367 tgaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 30454269  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||| ||||    
T  30454268 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttatttttct 30454196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 30459424 - 30459254
Alignment:
Q  258 gaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataat 356  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | |||||||||||||||    
T  30459424 gaggttgataatacagg-tgttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataat 30459326  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
     ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||| ||||    
T  30459325 ctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttatttttct 30459254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 425
Target Start/End: Original strand, 18569061 - 18569229
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  18569061 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 18569159  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  18569160 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 18569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 24422299 - 24422470
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  24422299 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 24422397  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| |||  |||||||||||| ||||| |||| | ||||||||||||    
T  24422398 tctcacacgaggtgtggggactggaagtagccggatttggtgaaccaggataactctcctgtgttattcttct 24422470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 5600599 - 5600698
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  5600599 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 5600698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 5610245 - 5610344
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  5610245 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 5610344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 31150801 - 31150702
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  31150801 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 31150702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 423
Target Start/End: Complemental strand, 30444995 - 30444829
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  30444995 tgaggttgataatacagg-tgttatggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 30444897  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttatt 423  Q
    | ||  |  ||||||| ||| |||||||| ||| |||||||||| || ||||| |||| | |||||||    
T  30444896 tctcacacgaggtgtggggactggaagtagccgggtttggtgaatcaggataactctcctgtgttatt 30444829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 424
Target Start/End: Original strand, 4635967 - 4636134
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||||||||  |||||||||| |||| || ||| |||||||  ||  ||||||||||||||    
T  4635967 tgaggttgataaaacagg-tgtaacggactgatatggtgtgatcaagatcttatagtgctggtcagaagtttctgttagcaagacaactatagtggataa 4636065  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattc 424  Q
    | ||     ||||||| ||| || || || ||| ||||||||||||| ||||| |||||| ||||||||    
T  4636066 tctcacgtgaggtgtggggactgaaaatagccgggtttggtgaaccaggataactctcatgtgttattc 4636134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 22118265 - 22118190
Alignment:
Q  261 gttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc 336  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||| || ||| || ||| |||||||    
T  22118265 gttgataatacaggatgtaacagactgatctggtgtgatcaagaccttatagtgttattcagaagtttctgttagc 22118190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 11223398 - 11223567
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||| ||||||||    
T  11223398 tgaggttgataatacaggg-gttacagactgatctggtgtgatcaagaccttatagtgttggttagaagtttctacca-ctgtatactataatggataat 11223495  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||  | ||||||||||||    
T  11223496 ctcacacgaagtgtggggactggaagtagccgagtttggtgaaccaggataactcttttgtgttattcttct 11223567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 37514971 - 37514856
Alignment:
Q  311 agtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaat 410  Q
    |||| ||||||||| ||||||| |||  |||||||||||||||||| ||  | |||||||| ||| | |||||| |||  |||| |||||||  ||||||    
T  37514971 agtgttagtcaaaaatttatgtcagcaagatactatagtggataatctcacacaaggtgtggggactagaagtagccggctttgatgaaccagtataaat 37514872  T
Q  411 ctcatttgttattctt 426  Q
    ||||| ||||||||||    
T  37514871 ctcatgtgttattctt 37514856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 17712981 - 17712895
Alignment:
Q  75 acacactccagctcataacagatttgtggatcatatattgtgagtgttttcatatcatcataccctcaaacccgagttaagtgtaaa 161  Q
    |||||||||||||| ||||| |||||||||||| ||||| | ||||| ||||||||||||||  || ||||  ||||| ||||||||    
T  17712981 acacactccagctcgtaacatatttgtggatcacatattctaagtgtgttcatatcatcatatgcttaaacatgagtttagtgtaaa 17712895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 13815538 - 13815371
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||| || || ||||| |||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  13815538 tgaggttgataatacaagg-gttacagaatgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgaatactatagtggataat 13815440  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| |||  |||||||||||| ||||| |||| | |||||||||    
T  13815439 ctcacatgaagtgtggggactggaagtagccggatttggtgaaccaggataactctcctgtgttattct 13815371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 33955665 - 33955498
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || ||  |||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  33955665 tgaggttgataatacagtg-gttacgtactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 33955567  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  33955566 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 33955498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 425
Target Start/End: Original strand, 20036046 - 20036188
Alignment:
Q  283 gactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaag 382  Q
    ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| ||||||||||||||||| ||  |  | ||||| ||| ||||||    
T  20036046 gactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgtatactatagtggataatctcacatgatgtgtggggactggaag 20036145  T
Q  383 taaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    || ||| ||||||||||||| ||||| |||| | |||||||||    
T  20036146 tagccgggtttggtgaaccaggataactctcctatgttattct 20036188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 429
Target Start/End: Original strand, 26652667 - 26652812
Alignment:
Q  284 actgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaagt 383  Q
    |||||| ||||||||||||||  | ||||||||||| | || ||| | ||||||| |||||||||||||| || ||  |  | ||||| ||| |||||||    
T  26652667 actgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagctgaatactatagtggattatctcacacgaagtgtggggactggaagt 26652766  T
Q  384 aaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
    |  |  |||||||||||||  |||| |||| | |||||||||||||    
T  26652767 agtcaggtttggtgaaccagcataactctcctgtgttattcttctt 26652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 429
Target Start/End: Original strand, 26924252 - 26924397
Alignment:
Q  284 actgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataatatcgtagaaggtgtgaggaatggaagt 383  Q
    |||||| ||||||||||||||  | ||||||||||| | || ||| | ||||||| |||||||||||||| || ||  |  | ||||| ||| |||||||    
T  26924252 actgatatggtgtgatcaagacctaatagtgctagttagaagtttctattagctgaatactatagtggattatctcacacgaagtgtggggactggaagt 26924351  T
Q  384 aaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
    |  |  |||||||||||||  |||| |||| | |||||||||||||    
T  26924352 agtcaggtttggtgaaccagcataactctcctgtgttattcttctt 26924397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 16110907 - 16110999
Alignment:
Q  261 gttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggat 353  Q
    |||||||||||||  ||||||||| || |||||||||||||||||  ||||||| || || ||| ||| || |||  |||||||||| |||||    
T  16110907 gttgataatacagaatgtaacagattggtctggtgtgatcaagaacatatagtgttattccaaagtttttgatagtaggatactataatggat 16110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 1693835 - 1693784
Alignment:
Q  254 tgatgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaa 305  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||||||||||    
T  1693835 tgatgaggttaacaatacatggtgtaatagactgatctggcgtgatcaagaa 1693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 26652878 - 26652953
Alignment:
Q  465 acacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||||  |||||| ||||| |||||||||| |||  ||||| |||||| | || ||||||||||||||||||||||    
T  26652878 acacacactatcacactcatattaatatttattaat--ctccagaatattatggtcctaattaatcacaaccaaatta 26652953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 26924463 - 26924538
Alignment:
Q  465 acacacataatcacaatcatactaatatttatgaatttctccataatattcttgttctaattaatcacaaccaaatta 542  Q
    |||||||  |||||| ||||| |||||||||| |||  ||||| |||||| | || ||||||||||||||||||||||    
T  26924463 acacacactatcacactcatattaatatttattaat--ctccagaatattatggtcctaattaatcacaaccaaatta 26924538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 37059108 - 37059279
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  37059108 tgaggttgataatacagg-tgtaacggactgatctggtgtgatcaagatcttgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 37059206  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  37059207 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 37059279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 259 - 424
Target Start/End: Complemental strand, 15843062 - 15842897
Alignment:
Q  259 aggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataata 357  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| || ||| |||||||  ||  |||||||||||||||     
T  15843062 aggttgataatacagg-tgtaacagactgatctgatgtgatcaagatcttatagtgctagtcagaagtttctgttagcaagacaactatagtggataatc 15842964  T
Q  358 tcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattc 424  Q
    ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||    
T  15842963 tcacacgaggtgtggggactggaagtagccgagtttggtgaaccaagataactctcctgtgttattc 15842897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 3242453 - 3242282
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  3242453 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 3242355  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  3242354 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 3242282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 26812530 - 26812701
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  26812530 tgaggttgataatacagg-tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 26812628  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  26812629 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 26812701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 428
Target Start/End: Original strand, 26821997 - 26822168
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||  || |||||||||||| || ||| |||||||  || | |||||||||||||    
T  26821997 tgaggttgataatacagg-tgttacggactgatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 26822095  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  26822096 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 26822168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 23622938 - 23623037
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  23622938 tgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 23623037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 54690079 - 54689911
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  54690079 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 54689981  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  54689980 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 54689911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 54699510 - 54699342
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  54699510 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 54699412  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  54699411 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 54699342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 425
Target Start/End: Original strand, 3918088 - 3918256
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || || ||||||||| || ||| |||||||  | | ||||||||||||||    
T  3918088 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtaatgctagtcagaagtttctgttagcaagaaaactatagtggataa 3918186  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||    
T  3918187 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattct 3918256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 45609486 - 45609567
Alignment:
Q  275 gtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||| |||||||||||||||||| |  |||||||||| |||||| ||| || ||| ||||||| ||||||||||||    
T  45609486 gtgtaacagattgatctggtgtgatcaaggacatatagtgctattcaaaagtttctgatagttggataccatagtggataat 45609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 16490006 - 16489947
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgct 316  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||| || ||||||||||    
T  16490006 tgaggttgataatactgagtgtaacagactgatatggtgtgatcaacaaattatagtgct 16489947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 1349753 - 1349801
Alignment:
Q  80 ctccagctcataacagatttgtggatcatatattgtgagtgttttcata 128  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  1349753 ctccagctcataacagatttgtggatcacatattttgagtgtgttcata 1349801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 18125684 - 18125617
Alignment:
Q  177 atctcatcatataaagtgaatcgtgttctgaagtctattcataaaaatagtttgagaaagaattgtaa 244  Q
    ||||||| ||| |||||  || ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  18125684 atctcattatacaaagtttattgtgttcttaagtctattcgtaacaatagtttgagaaagaattgtaa 18125617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 18125575 - 18125530
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaa 302  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  18125575 tgaggttgataatacaaggtgtaacagaatgatctgttgtgatcaa 18125530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 429
Target Start/End: Complemental strand, 50516663 - 50516492
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||| || || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | | | |||||||||||||||||    
T  50516663 tgaggttgataatacaagg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaaatttctaccaacggaatactatagtggataat 50516565  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| ||||||||  || |||||| |||||| ||||| |||| | |||||||||||||    
T  50516564 ctcacacgaagtgtggggactggaagtagtcgggtttggggaaccaggataactctcctgtgttattcttctt 50516492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 424
Target Start/End: Original strand, 10064 - 10230
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctgga-tactatagtggataa 355  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||| || ||| |||||||  ||  ||||||||||||||    
T  10064 tgaggttgataatacagg-tgtaacagactgatctggtgtgatctagaccttatagtgctagtcagaagtttctgttagcaagacaactatagtggataa 10162  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattc 424  Q
    | ||  |   |||||| ||| ||||| || ||||||||||||||||| ||||| |||||| ||||||||    
T  10163 tctcacacggggtgtggggactggaa-tagccgtgtttggtgaaccaagataactctcatgtgttattc 10230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 30989 - 30818
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataa 355  Q
    |||||||||||||||||| ||| || |||||||||||||||||||| |  || ||||| |||||| || ||| |||||||  || | |||||||||||||    
T  30989 tgaggttgataatacagg-tgttactgactgatctggtgtgatcaaaatattgtagtgttagtcagaagtttctgttagcaagaaaactatagtggataa 30891  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
    | ||  |  ||||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | ||||||||||||    
T  30890 tctcacacgaggtgtggggactggaagtagccgggtttggtgaaccaggataactctcctgtgttattcttct 30818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 14980 - 14881
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  14980 tgaggttgataatacagagtgtaacagactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 14881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 24612 - 24711
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||||||||||||    
T  24612 tgaggttgataatacagagtgtaacggactgatctggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactatagtggataat 24711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 94597 - 94429
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  94597 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 94499  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| |||||||| ||| |||| |||||||| ||||| |||| | |||||||||    
T  94498 tctcacacgaggtgtggggactggaagtagccgggtttagtgaaccaggataactctcctgtgttattct 94429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 104038 - 103870
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagc-tggatactatagtggataa 355  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || |||||||||||| || ||| |||||||  | | ||||||||||||||    
T  104038 tgaggttgataatacagag-gttacggactgatctggtgtgatcaagaaattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataa 103940  T
Q  356 tatcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattct 425  Q
    | ||  |  ||||||| ||| ||||| || ||| ||||||||||||| ||||| |||| | |||||||||    
T  103939 tctcacacgaggtgtggggactggaattagccgggtttggtgaaccaggataactctcctgtgttattct 103870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 100002 - 100101
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||| ||| || ||| || |||| |||||||||| ||||||||    
T  100002 tgaggttgataatacagagtgtaacagactgatttggtgtgatcaacatattatagtgctattcagaagtttctgatagcaggatactataatggataat 100101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 124069 - 124240
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||  |||||||| | || | || ||| |   | ||| |||||||||||||||||    
T  124069 tgaggttgataatacagtg-gttacggactgatctggtgtgatcaagaccttatagtgttggttagaagtttctaccaactgcatactatagtggataat 124167  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||||||||| |  |||| ||||||| ||||| |||| | |||||||||||||    
T  124168 ctcacacgaagtgtggggactggaagtaacaggatttgatgaaccaggataactctcctgtgttattcttctt 124240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 428
Target Start/End: Original strand, 408351 - 408521
Alignment:
Q  258 gaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggata-ctatagtggataat 356  Q
    ||||||||||||||||| ||| || |||| |||||||||||||||||  || |||||||||||| || ||| |||||||  || | ||||||||||||||    
T  408351 gaggttgataatacagg-tgttacggactaatctggtgtgatcaagatattgtagtgctagtcagaagtttctgttagcaagaaaactatagtggataat 408449  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttct 428  Q
     ||  |  ||||||| ||| ||||||||  || ||||||||||||| ||||| |||| | ||||||||||||    
T  408450 ctcacacgaggtgtggggactggaagtagacgggtttggtgaaccaggataactctcctgtgttattcttct 408521  T

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Target: scaffold0206 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 2131 - 2302
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggataat 356  Q
    |||||||||||||||||||  || | ||||||||||||||||||||||  |||||||| | || | || |||||   | ||| |||||||||||||||||    
T  2131 tgaggttgataatacagggatta-cggactgatctggtgtgatcaagaccttatagtgttggttagaagtttataccaactgtatactatagtggataat 2229  T
Q  357 atcgtagaaggtgtgaggaatggaagtaaccgtgtttggtgaaccatgataaatctcatttgttattcttctt 429  Q
     ||  |  | ||||| ||| |||||||| ||| ||||||||||||| ||||| |||| | |||||||||||||    
T  2230 ctcacacgaagtgtggggactggaagtagccgggtttggtgaaccaggataactctcttgtgttattcttctt 2302  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 27223 - 27127
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaagttatagtgctagtcaaaattttatgttagctggatactatagtggat 353  Q
    ||||||||||||||||| |||||||  | |||||| |||||||||||||  ||||||| || | | || ||| || ||| |||||||||||||||||    
T  27223 tgaggttgataatacagagtgtaacgaattgatctagtgtgatcaagaacatatagtgttattaagaagtttctgatagttggatactatagtggat 27127  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 42133 - 42085
Alignment:
Q  257 tgaggttgataatacagggtgtaacagactgatctggtgtgatcaagaa 305  Q
    |||||||||||||||| | ||||| |||||||||| || ||||||||||    
T  42133 tgaggttgataatacatgatgtaatagactgatctagtatgatcaagaa 42085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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