View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17095_high_15 (Length: 292)
Name: NF17095_high_15
Description: NF17095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17095_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 32619082 - 32618810
Alignment:
| Q |
14 |
cagtttcatcttattttcaccttttgattcatgttttgttatgtccctatttcttattttaatttcacaattgtttgtttatattacaa--catcannnn |
111 |
Q |
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| T |
32619082 |
cagtttcatcttattttcaccttttgattcatgttatgttatgtccctatttcttattttaatttcacaattgtttgtttatattacaaaacatcatttt |
32618983 |
T |
|
| Q |
112 |
nnnnn---aatatatcattctcttagataagtatttgttctttaatattcttaaatcaatgttaacgttatcaatatatcaattcttttaaaatggatcc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32618982 |
ttttttttaatatatcattctcttagataagtatttgttctttaatattcttaaatcaatgttaacgttatcaatatatcaattcttttaaaatggatcc |
32618883 |
T |
|
| Q |
209 |
tatagtcacgattgtaatttaaaaccttgttatgaaacgaaggttttaaatcaatgttgtgatcattgatatt |
281 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32618882 |
tatagtcacaattgtaatttaaaaccttgttatgaaacgaaggttttaaatcaatgttgtgatcattgatatt |
32618810 |
T |
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