View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17095_low_5 (Length: 450)
Name: NF17095_low_5
Description: NF17095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17095_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 37 - 436
Target Start/End: Original strand, 41794133 - 41794531
Alignment:
| Q |
37 |
tagtgtgcattacaactaccgtccttttctttctacctaaaagcagagtacgtagaaaaactttaactaaagaattggaaactactactactttagtact |
136 |
Q |
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| T |
41794133 |
tagtgtgcattacaactaccgtccttttctttctacctaaaagcagagtacgtagaaaa-ctttaactaaagaattggaaactactactactttagtact |
41794231 |
T |
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| Q |
137 |
taacttttacccttccttgaatcaagtcactactgcattatgactcataactcatatagttctgaatggatcttaatgtcagtcctcaaaccattaatac |
236 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41794232 |
taacttttacccttccttgaatcaaatcactactgcattatgactcataactcatatagttctgaatggatcttaatgtcagtcctcaaaccattaatac |
41794331 |
T |
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| Q |
237 |
ctaactactagtacactaaaattaactgagtcactcaccactactcatagagtacttaaaactactttgacttgtaatgtagatagattagggataataa |
336 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41794332 |
ctaactactagtacactaaaattaactgagtcactcactactactcatagagtacttaaaactactttgacttgtaatgtagatagattagggataataa |
41794431 |
T |
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| Q |
337 |
ttaggtaatacaggccagtgacattgattaggaggcattgaaactgagttattaaaatcttcaacaatgaaagtagtactgttgttgttgttattgtatc |
436 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41794432 |
ttaggtaatacaggccagtgacattgattaggaggcattgaaactgagttattaaaatcttcaacaatgaaagtagtactgttgttgttgttattgtatc |
41794531 |
T |
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