View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17098_low_4 (Length: 253)

Name: NF17098_low_4
Description: NF17098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17098_low_4
NF17098_low_4
[»] chr7 (49 HSPs)
chr7 (16-196)||(818710-818891)
chr7 (16-196)||(830172-830352)
chr7 (16-196)||(1195352-1195532)
chr7 (197-253)||(1824200-1824256)
chr7 (197-252)||(4514849-4514904)
chr7 (197-253)||(39979624-39979680)
chr7 (197-253)||(40847435-40847491)
chr7 (196-253)||(36993903-36993960)
chr7 (197-251)||(38090348-38090402)
chr7 (197-253)||(3872187-3872243)
chr7 (197-253)||(3904478-3904534)
chr7 (197-253)||(15014405-15014461)
chr7 (197-253)||(18217912-18217968)
chr7 (197-253)||(21917334-21917390)
chr7 (197-253)||(22486477-22486533)
chr7 (197-253)||(23232122-23232178)
chr7 (197-253)||(23539315-23539371)
chr7 (197-253)||(26577348-26577404)
chr7 (198-253)||(24140533-24140588)
chr7 (214-253)||(36636589-36636628)
chr7 (197-251)||(1907440-1907494)
chr7 (197-242)||(9698538-9698583)
chr7 (196-253)||(23699824-23699881)
chr7 (198-251)||(27132722-27132775)
chr7 (196-253)||(28800961-28801018)
chr7 (197-253)||(1842977-1843033)
chr7 (197-253)||(6849211-6849267)
chr7 (197-253)||(7733312-7733368)
chr7 (107-151)||(8457856-8457900)
chr7 (197-253)||(11036590-11036646)
chr7 (197-253)||(27806101-27806157)
chr7 (197-253)||(31425511-31425567)
chr7 (197-253)||(37135285-37135341)
chr7 (197-253)||(48933219-48933275)
chr7 (197-252)||(23750736-23750791)
chr7 (201-251)||(2457753-2457803)
chr7 (197-251)||(20923958-20924012)
chr7 (197-230)||(687972-688005)
chr7 (110-143)||(777622-777655)
chr7 (206-251)||(11852093-11852138)
chr7 (196-253)||(24605921-24605978)
chr7 (197-253)||(2093362-2093418)
chr7 (197-253)||(2650828-2650884)
chr7 (164-196)||(8457786-8457818)
chr7 (197-253)||(20174103-20174159)
chr7 (197-253)||(20429548-20429604)
chr7 (197-253)||(21623104-21623159)
chr7 (199-243)||(32267439-32267483)
chr7 (197-253)||(47523650-47523706)
[»] chr8 (42 HSPs)
chr8 (197-253)||(10917908-10917964)
chr8 (197-253)||(17824616-17824672)
chr8 (197-253)||(8789921-8789977)
chr8 (197-253)||(17103865-17103921)
chr8 (197-251)||(15251684-15251738)
chr8 (197-251)||(29345154-29345208)
chr8 (197-253)||(4331059-4331115)
chr8 (197-253)||(8555304-8555360)
chr8 (197-253)||(18844544-18844600)
chr8 (197-253)||(19240948-19241004)
chr8 (197-253)||(19256293-19256349)
chr8 (197-253)||(19314132-19314188)
chr8 (197-253)||(19488061-19488117)
chr8 (197-253)||(24193196-24193252)
chr8 (197-253)||(24576024-24576080)
chr8 (197-253)||(25655858-25655914)
chr8 (197-253)||(27910764-27910820)
chr8 (197-253)||(27957183-27957239)
chr8 (197-253)||(30466954-30467010)
chr8 (199-251)||(37992182-37992234)
chr8 (197-252)||(25274679-25274734)
chr8 (197-243)||(11938835-11938881)
chr8 (197-253)||(4647755-4647811)
chr8 (197-253)||(8824906-8824962)
chr8 (197-253)||(9631485-9631541)
chr8 (197-253)||(16061939-16061995)
chr8 (197-253)||(17810379-17810435)
chr8 (197-253)||(22939394-22939450)
chr8 (197-253)||(25000431-25000487)
chr8 (197-253)||(27869319-27869375)
chr8 (197-253)||(32247990-32248046)
chr8 (197-253)||(33652648-33652704)
chr8 (197-253)||(43431559-43431615)
chr8 (197-252)||(3823215-3823270)
chr8 (197-251)||(6084246-6084300)
chr8 (199-253)||(9915043-9915097)
chr8 (197-231)||(17003365-17003399)
chr8 (197-231)||(29351027-29351061)
chr8 (197-230)||(30688040-30688073)
chr8 (197-253)||(13060931-13060987)
chr8 (197-253)||(18010060-18010116)
chr8 (197-253)||(21350559-21350615)
[»] chr2 (34 HSPs)
chr2 (197-253)||(41637697-41637753)
chr2 (196-253)||(29749402-29749459)
chr2 (197-253)||(27327695-27327751)
chr2 (197-253)||(30783417-30783473)
chr2 (196-253)||(31266433-31266490)
chr2 (196-253)||(20065073-20065130)
chr2 (196-253)||(37552306-37552363)
chr2 (197-253)||(12779679-12779735)
chr2 (197-253)||(27039908-27039964)
chr2 (197-253)||(41736251-41736307)
chr2 (197-253)||(43408511-43408567)
chr2 (197-253)||(44476375-44476431)
chr2 (198-253)||(28319580-28319635)
chr2 (197-251)||(22192260-22192314)
chr2 (196-253)||(8430375-8430432)
chr2 (196-253)||(32185911-32185968)
chr2 (197-253)||(7093647-7093703)
chr2 (197-253)||(13788055-13788111)
chr2 (197-253)||(15636735-15636791)
chr2 (197-253)||(22140364-22140420)
chr2 (197-253)||(28841342-28841398)
chr2 (197-252)||(21293711-21293766)
chr2 (198-253)||(23388379-23388434)
chr2 (196-231)||(23857957-23857992)
chr2 (197-231)||(16098917-16098951)
chr2 (197-243)||(32009042-32009088)
chr2 (197-251)||(37802379-37802433)
chr2 (197-231)||(44723033-44723067)
chr2 (204-253)||(1141615-1141664)
chr2 (204-253)||(32300530-32300579)
chr2 (203-243)||(12860235-12860275)
chr2 (197-253)||(18551253-18551309)
chr2 (197-253)||(26243321-26243377)
chr2 (197-249)||(36550918-36550970)
[»] chr1 (39 HSPs)
chr1 (197-253)||(50845330-50845386)
chr1 (197-253)||(13102399-13102455)
chr1 (197-253)||(14760950-14761006)
chr1 (197-253)||(12720892-12720948)
chr1 (197-252)||(7830115-7830170)
chr1 (197-253)||(6412053-6412109)
chr1 (197-253)||(9109975-9110031)
chr1 (197-253)||(28229455-28229511)
chr1 (197-253)||(38531170-38531226)
chr1 (196-252)||(41752517-41752573)
chr1 (197-253)||(46790083-46790139)
chr1 (197-253)||(51973507-51973563)
chr1 (197-252)||(8940994-8941049)
chr1 (197-252)||(29549502-29549557)
chr1 (191-253)||(9177183-9177245)
chr1 (197-243)||(12369951-12369997)
chr1 (197-251)||(46865328-46865382)
chr1 (196-253)||(52183761-52183818)
chr1 (197-253)||(6459300-6459356)
chr1 (197-253)||(7181555-7181611)
chr1 (201-253)||(16913581-16913633)
chr1 (197-253)||(20408160-20408216)
chr1 (197-253)||(45839375-45839431)
chr1 (197-253)||(46339445-46339501)
chr1 (197-253)||(50092298-50092354)
chr1 (197-252)||(12989936-12989991)
chr1 (198-253)||(25787998-25788053)
chr1 (197-252)||(27253855-27253910)
chr1 (197-252)||(48522602-48522657)
chr1 (203-252)||(46785964-46786013)
chr1 (197-253)||(4340490-4340546)
chr1 (197-253)||(9985327-9985383)
chr1 (197-253)||(13195666-13195722)
chr1 (197-253)||(17200010-17200066)
chr1 (197-253)||(17661133-17661189)
chr1 (197-253)||(22603631-22603687)
chr1 (197-252)||(22789593-22789646)
chr1 (207-251)||(30928388-30928432)
chr1 (197-253)||(41120737-41120793)
[»] scaffold0047 (1 HSPs)
scaffold0047 (197-253)||(58665-58721)
[»] chr6 (43 HSPs)
chr6 (197-253)||(22083921-22083977)
chr6 (200-253)||(11077732-11077785)
chr6 (197-252)||(11530309-11530364)
chr6 (197-252)||(12951792-12951847)
chr6 (196-253)||(14772744-14772801)
chr6 (198-253)||(5360492-5360547)
chr6 (197-251)||(9885328-9885382)
chr6 (200-250)||(11350265-11350315)
chr6 (200-253)||(14872202-14872255)
chr6 (197-242)||(18033526-18033571)
chr6 (196-253)||(30833959-30834016)
chr6 (197-253)||(6598547-6598603)
chr6 (197-253)||(6605496-6605552)
chr6 (197-253)||(9893046-9893102)
chr6 (197-253)||(15364458-15364514)
chr6 (197-253)||(15448468-15448524)
chr6 (197-253)||(24661009-24661065)
chr6 (197-253)||(26224511-26224567)
chr6 (197-253)||(28364994-28365050)
chr6 (197-251)||(8844168-8844222)
chr6 (201-251)||(12157380-12157430)
chr6 (196-253)||(12200777-12200834)
chr6 (197-253)||(495627-495683)
chr6 (197-253)||(1939242-1939298)
chr6 (197-253)||(12351586-12351642)
chr6 (197-253)||(15961407-15961463)
chr6 (197-253)||(16250802-16250858)
chr6 (197-253)||(20182228-20182284)
chr6 (197-253)||(22153707-22153763)
chr6 (197-253)||(22579349-22579405)
chr6 (197-253)||(28668183-28668239)
chr6 (197-251)||(14886646-14886700)
chr6 (197-231)||(21990175-21990209)
chr6 (198-243)||(10458857-10458902)
chr6 (200-253)||(21141022-21141075)
chr6 (200-253)||(25398085-25398138)
chr6 (198-231)||(27796835-27796868)
chr6 (201-253)||(1954963-1955015)
chr6 (197-253)||(2669392-2669448)
chr6 (197-253)||(5250222-5250278)
chr6 (197-253)||(6978360-6978416)
chr6 (197-253)||(11049751-11049807)
chr6 (197-253)||(12160847-12160903)
[»] chr5 (37 HSPs)
chr5 (197-253)||(25397788-25397844)
chr5 (197-253)||(33818561-33818617)
chr5 (197-253)||(16121839-16121895)
chr5 (197-253)||(23423756-23423812)
chr5 (196-253)||(12045810-12045867)
chr5 (197-253)||(8108860-8108916)
chr5 (197-253)||(12328226-12328282)
chr5 (197-253)||(36196477-36196533)
chr5 (197-253)||(36597340-36597396)
chr5 (197-253)||(38837671-38837727)
chr5 (197-251)||(13620127-13620181)
chr5 (197-253)||(618377-618433)
chr5 (197-253)||(746868-746924)
chr5 (197-253)||(2472714-2472770)
chr5 (197-253)||(4125188-4125244)
chr5 (197-253)||(7003730-7003786)
chr5 (197-253)||(7888880-7888936)
chr5 (197-253)||(8886851-8886907)
chr5 (197-253)||(16631874-16631930)
chr5 (197-253)||(17039631-17039687)
chr5 (197-249)||(35620344-35620396)
chr5 (197-243)||(5982739-5982785)
chr5 (197-231)||(13974078-13974112)
chr5 (197-231)||(36831890-36831924)
chr5 (196-253)||(15061056-15061113)
chr5 (197-242)||(16464723-16464768)
chr5 (194-243)||(23409074-23409123)
chr5 (196-241)||(29727894-29727939)
chr5 (197-242)||(40484138-40484183)
chr5 (197-253)||(10494820-10494876)
chr5 (197-253)||(17036412-17036468)
chr5 (197-253)||(20187941-20187997)
chr5 (197-253)||(20959591-20959647)
chr5 (197-253)||(26708585-26708641)
chr5 (197-253)||(26978319-26978375)
chr5 (197-253)||(28265475-28265531)
chr5 (197-253)||(36716200-36716256)
[»] chr4 (40 HSPs)
chr4 (197-253)||(33914140-33914196)
chr4 (197-252)||(9058952-9059007)
chr4 (197-253)||(5399690-5399746)
chr4 (197-253)||(30420033-30420089)
chr4 (194-251)||(1638530-1638587)
chr4 (196-253)||(27040024-27040081)
chr4 (197-253)||(4586758-4586814)
chr4 (197-253)||(7111946-7112002)
chr4 (197-253)||(22168349-22168405)
chr4 (197-253)||(32175737-32175793)
chr4 (197-253)||(46286229-46286285)
chr4 (197-252)||(19839261-19839316)
chr4 (198-253)||(24682328-24682383)
chr4 (197-251)||(22128312-22128366)
chr4 (207-253)||(25147802-25147848)
chr4 (197-243)||(55309212-55309258)
chr4 (196-253)||(5473930-5473987)
chr4 (197-242)||(13564915-13564960)
chr4 (196-253)||(30508068-30508125)
chr4 (197-253)||(9238625-9238681)
chr4 (197-253)||(9670479-9670535)
chr4 (197-253)||(18714983-18715039)
chr4 (197-253)||(30268988-30269044)
chr4 (197-253)||(30283145-30283201)
chr4 (197-253)||(38619928-38619984)
chr4 (197-253)||(38645831-38645887)
chr4 (197-253)||(42055478-42055534)
chr4 (197-253)||(44783564-44783620)
chr4 (197-253)||(45091342-45091398)
chr4 (198-253)||(4627079-4627134)
chr4 (197-251)||(4606829-4606883)
chr4 (197-251)||(8878966-8879020)
chr4 (197-251)||(16915452-16915506)
chr4 (197-251)||(25225180-25225234)
chr4 (204-252)||(39235022-39235071)
chr4 (204-252)||(18051921-18051969)
chr4 (197-253)||(19680424-19680480)
chr4 (201-253)||(38223591-38223643)
chr4 (197-253)||(45532579-45532635)
chr4 (197-253)||(54539367-54539423)
[»] chr3 (57 HSPs)
chr3 (197-253)||(15063992-15064048)
chr3 (197-253)||(19610417-19610473)
chr3 (197-253)||(30219417-30219473)
chr3 (197-253)||(16299940-16299996)
chr3 (197-253)||(37283602-37283658)
chr3 (196-251)||(5744497-5744552)
chr3 (196-251)||(5781456-5781511)
chr3 (197-253)||(29216071-29216127)
chr3 (196-251)||(20761949-20762004)
chr3 (197-251)||(5565803-5565857)
chr3 (197-251)||(21020146-21020200)
chr3 (196-253)||(43329762-43329819)
chr3 (196-253)||(50665635-50665692)
chr3 (197-253)||(5261016-5261072)
chr3 (197-253)||(6447246-6447302)
chr3 (197-253)||(8110418-8110474)
chr3 (197-253)||(19223528-19223584)
chr3 (197-253)||(27449167-27449223)
chr3 (197-253)||(48404939-48404995)
chr3 (198-253)||(11915837-11915892)
chr3 (196-251)||(46012727-46012782)
chr3 (196-253)||(18091546-18091603)
chr3 (198-251)||(27968996-27969049)
chr3 (197-253)||(3461310-3461366)
chr3 (197-253)||(9652657-9652713)
chr3 (197-253)||(10941665-10941721)
chr3 (197-253)||(11007683-11007739)
chr3 (196-252)||(11219218-11219274)
chr3 (197-253)||(13905038-13905094)
chr3 (197-253)||(13921404-13921460)
chr3 (197-253)||(18104530-18104586)
chr3 (197-253)||(19269864-19269920)
chr3 (197-253)||(21816800-21816856)
chr3 (197-237)||(23233184-23233224)
chr3 (197-253)||(25882649-25882705)
chr3 (197-253)||(26098892-26098948)
chr3 (197-253)||(26390634-26390690)
chr3 (197-253)||(31250167-31250223)
chr3 (194-253)||(1628294-1628353)
chr3 (197-252)||(29236124-29236179)
chr3 (197-243)||(1745488-1745534)
chr3 (197-231)||(10803822-10803856)
chr3 (197-251)||(21088831-21088885)
chr3 (197-251)||(36543830-36543884)
chr3 (197-251)||(36564439-36564493)
chr3 (197-251)||(49915532-49915586)
chr3 (196-253)||(11837213-11837270)
chr3 (204-253)||(18539883-18539932)
chr3 (204-252)||(4393357-4393405)
chr3 (197-253)||(6088228-6088284)
chr3 (197-253)||(8428250-8428306)
chr3 (197-253)||(8546324-8546380)
chr3 (197-253)||(17762721-17762777)
chr3 (197-253)||(18380103-18380159)
chr3 (197-253)||(19064041-19064097)
chr3 (197-253)||(29956451-29956507)
chr3 (197-253)||(30005606-30005662)
[»] scaffold0069 (1 HSPs)
scaffold0069 (196-253)||(10241-10298)
[»] scaffold0058 (1 HSPs)
scaffold0058 (197-253)||(74541-74597)
[»] scaffold0576 (1 HSPs)
scaffold0576 (197-253)||(9229-9285)
[»] scaffold0599 (1 HSPs)
scaffold0599 (198-253)||(7588-7643)
[»] scaffold0009 (2 HSPs)
scaffold0009 (196-253)||(219719-219776)
scaffold0009 (198-252)||(182614-182668)
[»] scaffold0007 (3 HSPs)
scaffold0007 (196-253)||(274664-274721)
scaffold0007 (197-253)||(3825-3881)
scaffold0007 (197-252)||(202858-202913)
[»] scaffold0655 (1 HSPs)
scaffold0655 (197-249)||(3162-3214)
[»] scaffold0603 (1 HSPs)
scaffold0603 (197-253)||(5979-6035)
[»] scaffold0240 (1 HSPs)
scaffold0240 (197-253)||(14990-15046)
[»] scaffold0219 (1 HSPs)
scaffold0219 (197-253)||(19686-19742)
[»] scaffold0128 (1 HSPs)
scaffold0128 (197-253)||(10663-10719)
[»] scaffold0108 (1 HSPs)
scaffold0108 (197-253)||(12735-12791)
[»] scaffold0076 (1 HSPs)
scaffold0076 (197-253)||(26566-26622)
[»] scaffold0023 (1 HSPs)
scaffold0023 (197-253)||(39703-39759)
[»] scaffold0014 (1 HSPs)
scaffold0014 (197-253)||(22294-22350)
[»] scaffold0011 (1 HSPs)
scaffold0011 (197-253)||(17617-17673)
[»] scaffold0001 (3 HSPs)
scaffold0001 (197-253)||(84386-84442)
scaffold0001 (197-253)||(8110-8166)
scaffold0001 (197-253)||(21842-21898)
[»] scaffold0717 (1 HSPs)
scaffold0717 (197-231)||(918-952)
[»] scaffold0502 (1 HSPs)
scaffold0502 (207-253)||(10975-11021)
[»] scaffold0161 (1 HSPs)
scaffold0161 (200-253)||(6878-6931)
[»] scaffold0087 (1 HSPs)
scaffold0087 (197-253)||(37787-37843)
[»] scaffold0062 (1 HSPs)
scaffold0062 (197-253)||(44000-44056)
[»] scaffold0006 (1 HSPs)
scaffold0006 (201-253)||(84678-84730)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 818710 - 818891
Alignment:
Q  16 atatattatgtttaaatttaaaaacaaatgtttaagattacaattatgtttgtataaccattaagttacacttnnnnnnnnn-ttggacgcaatgtacat 114  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          |||||| ||||||||||    
T  818710 atatattatgtttaaatttaaaaacaaatgtttaagattacagttatgtttgtataaccattaagttacacttaaaaaaaaaattggacacaatgtacat 818809  T
Q  115 ttaatttgcaaaatgcatttgcatgaaaaatgccaaatggtaaaaatattacgtagttgtctttactttgtatgtaaaatgg 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  818810 ttaatttgcaaaatgcatttgcatgaaaaatgccaaatggtaaaaatattacgtagttgtctttactttgtatgtcaaatgg 818891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 830172 - 830352
Alignment:
Q  16 atatattatgtttaaatttaaaaacaaatgtttaagattacaattatgtttgtataaccattaagttacacttnnnnnnnnnttggacgcaatgtacatt 115  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||         | |||| |||||||||||    
T  830172 atatattatgtttaaatttaaaatcaaatgtttaagattacagttatgtttgtataacaattaagttacacttaaaaaaaaat-ggacacaatgtacatt 830270  T
Q  116 taatttgcaaaatgcatttgcatgaaaaatg-ccaaatggtaaaaatattacgtagttgtctttactttgtatgtaaaatgg 196  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  830271 taatttgcaaaatgcatttgcatgaaaaatgtcaaaatggtaaaaatgttacgtagttgtctttactttgtatgtcaaatgg 830352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 1195352 - 1195532
Alignment:
Q  16 atatattatgtttaaatttaaaaacaaatgtttaagattacaattatgtttgtataaccattaagttacacttnnnnnnnnnttggacgcaatgtacatt 115  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||         | |||| |||||||||||    
T  1195352 atatattatgtttaaatttaaaatcaaatgtttaagattacagttatgtttgtataacaattaagttacacttaaaaaaaaat-ggacacaatgtacatt 1195450  T
Q  116 taatttgcaaaatgcatttgcatgaaaaatg-ccaaatggtaaaaatattacgtagttgtctttactttgtatgtaaaatgg 196  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1195451 taatttgcaaaatgcatttgcatgaaaaatgtcaaaatggtaaaaatgttacgtagttgtctttactttgtatgtcaaatgg 1195532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 1824200 - 1824256
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  1824200 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 1824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 4514904 - 4514849
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  4514904 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatt 4514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 39979624 - 39979680
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  39979624 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 39979680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 40847435 - 40847491
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  40847435 cactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattc 40847491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 36993960 - 36993903
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||| |||||||||    
T  36993960 gcactactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattc 36993903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 38090402 - 38090348
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||| |||||||    
T  38090402 cactactaggaatagcaaaattagggagggaaatttgtgacggaaaaaataaaat 38090348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 3872187 - 3872243
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  3872187 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 3872243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 3904478 - 3904534
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  3904478 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 3904534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15014405 - 15014461
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| |||||||||    
T  15014405 cactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattc 15014461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 18217968 - 18217912
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  18217968 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 18217912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 21917334 - 21917390
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  21917334 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 21917390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22486533 - 22486477
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  22486533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 22486477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 23232178 - 23232122
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  23232178 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattc 23232122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 23539371 - 23539315
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  23539371 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 23539315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 26577404 - 26577348
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||| | ||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  26577404 cactactgggaaaagcaaaattaggaagggaaacttgtgacggaaaacataaaattc 26577348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 24140588 - 24140533
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||| ||||| ||||||||||||| |||||||| |||||||| |||||||||    
T  24140588 actactaggaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattc 24140533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 36636628 - 36636589
Alignment:
Q  214 aaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  36636628 aaattagggagggaaatttgtgacggaaaacataaaattc 36636589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 1907494 - 1907440
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| |||||||    
T  1907494 cactactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaat 1907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 9698538 - 9698583
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaa 242  Q
    |||||||||||||||||||||||| |||||||||| || |||||||    
T  9698538 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 9698583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 23699824 - 23699881
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  23699824 gcactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 23699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 27132722 - 27132775
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||| |||||||| |||||||||| || |||||||| |||||||    
T  27132722 actactagaaaaagtaaaattagagagggaaattggtaacggaaaaaataaaat 27132775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 28801018 - 28800961
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || || ||||| || ||||||    
T  28801018 gcactactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattc 28800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 1843033 - 1842977
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  1843033 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 1842977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 6849211 - 6849267
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || ||||| || || ||||||    
T  6849211 cactactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattc 6849267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7733312 - 7733368
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||| ||||||| |||||||||| || |||||||| || ||||||    
T  7733312 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattc 7733368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 8457900 - 8457856
Alignment:
Q  107 atgtacatttaatttgcaaaatgcatttgcatgaaaaatgccaaa 151  Q
    ||||||||||||| || |||||||||||||||||||| |||||||    
T  8457900 atgtacatttaatctgtaaaatgcatttgcatgaaaattgccaaa 8457856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 11036646 - 11036590
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  11036646 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattc 11036590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 27806157 - 27806101
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  27806157 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 27806101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 31425511 - 31425567
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  31425511 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 31425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 37135285 - 37135341
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  37135285 cactactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattc 37135341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 48933275 - 48933219
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||| ||||| || |||||||| |||||||||    
T  48933275 cactattagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattc 48933219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 23750736 - 23750791
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || |||||    
T  23750736 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatt 23750791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 2457803 - 2457753
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||| ||||||||||||||||||||||||| || || ||||| |||||||    
T  2457803 actaggaaaagcaaaattagggagggaaattagtgacagaaaatataaaat 2457753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 20923958 - 20924012
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||||| ||||||||||| || | |||||| |||||||    
T  20923958 cactactagaaaaagtaaaattatggagggaaattagtgatggaaaaaataaaat 20924012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 688005 - 687972
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaat 230  Q
    |||||||||||||||||||||||| |||||||||    
T  688005 cactactagaaaaagcaaaattagcgagggaaat 687972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 777622 - 777655
Alignment:
Q  110 tacatttaatttgcaaaatgcatttgcatgaaaa 143  Q
    ||||||||||||| ||||||||||||||||||||    
T  777622 tacatttaatttgtaaaatgcatttgcatgaaaa 777655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 11852138 - 11852093
Alignment:
Q  206 aaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||| ||||||||| || ||||| |||||||    
T  11852138 aaaaagcaaaattagggagagaaatttgtgacagaaaaaataaaat 11852093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 24605978 - 24605921
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||| ||||| || |||||||||| || |||||||| || ||||||    
T  24605978 gcactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattc 24605921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 2093362 - 2093418
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||| || |||||||||| || |||||||| || ||||||    
T  2093362 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattc 2093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 2650828 - 2650884
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| ||||||| || || |||||||| || ||||||    
T  2650828 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattc 2650884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 8457818 - 8457786
Alignment:
Q  164 tacgtagttgtctttactttgtatgtaaaatgg 196  Q
    |||||||||||||||||||||||||| ||||||    
T  8457818 tacgtagttgtctttactttgtatgtcaaatgg 8457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 20174159 - 20174103
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| || |||||||||||||| |||||||||| || |||||||| || ||||||    
T  20174159 cactaccaggaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 20174103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 20429604 - 20429548
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||   ||||||||| || |||||||| || ||||||    
T  20429604 cactactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattc 20429548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 21623159 - 21623104
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||    
T  21623159 cactactagaaaaagcaaaa-tagcgagggaaattagtgacggaaaaaatgaaattc 21623104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 32267483 - 32267439
Alignment:
Q  199 ctactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    ||||||||||| ||||||||||||||||| ||| || ||||||||    
T  32267483 ctactagaaaatgcaaaattagggagggagattagtgacggaaaa 32267439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 47523650 - 47523706
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||  |||||||| |||||||||| || |||||||| || ||||||    
T  47523650 cactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattc 47523706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 10917964 - 10917908
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10917964 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 10917908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17824616 - 17824672
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  17824616 cactactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattc 17824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 8789977 - 8789921
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||    
T  8789977 cactactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattc 8789921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17103865 - 17103921
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||    
T  17103865 cactactagaaaaaacaaaattagagagagaaatttgtgacggaaaacataaaattc 17103921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 15251738 - 15251684
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||| |||||||    
T  15251738 cactacttgaaaaagcaaaattagggagggaaattagtgacggaaaaaataaaat 15251684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 29345208 - 29345154
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||| |||||||    
T  29345208 cactactagaaaaagaaaaattagggagggaaattagtgacggaaaaaataaaat 29345154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 4331115 - 4331059
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  4331115 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 4331059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8555304 - 8555360
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  8555304 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 8555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18844544 - 18844600
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||||| || ||||||| | ||||||||||||||||    
T  18844544 cactactaggaaaagcaaaattagggatggtaatttgtgatggaaaacataaaattc 18844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19241004 - 19240948
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  19241004 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 19240948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19256349 - 19256293
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| |||||||||    
T  19256349 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattc 19256293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19314188 - 19314132
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  19314188 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 19314132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 19488061 - 19488117
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  19488061 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 19488117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 24193196 - 24193252
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  24193196 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 24193252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 24576024 - 24576080
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  24576024 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 24576080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25655858 - 25655914
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  25655858 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 25655914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 27910764 - 27910820
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  27910764 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 27910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 27957183 - 27957239
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  27957183 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 27957239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 30466954 - 30467010
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||  ||||||||    
T  30466954 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattc 30467010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 37992234 - 37992182
Alignment:
Q  199 ctactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||| ||||||||||||||||||| ||||| || ||||||||||||||||    
T  37992234 ctactaggaaaagcaaaattagggaggaaaattagtgacggaaaacataaaat 37992182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 25274734 - 25274679
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || |||||    
T  25274734 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 25274679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 11938881 - 11938835
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||    
T  11938881 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaa 11938835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 4647755 - 4647811
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  4647755 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 4647811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 8824962 - 8824906
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || | |||||| || ||||||    
T  8824962 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattc 8824906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 9631541 - 9631485
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||| ||||| || |||||||| |||||||||    
T  9631541 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattc 9631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 16061939 - 16061995
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  16061939 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattc 16061995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 17810435 - 17810379
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  17810435 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 17810379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22939450 - 22939394
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| || ||||||| || |||||||| || ||||||    
T  22939450 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattc 22939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25000431 - 25000487
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  25000431 cactactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattc 25000487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 27869375 - 27869319
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || | |||||| || ||||||    
T  27869375 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattc 27869319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 32248046 - 32247990
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  32248046 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 32247990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 33652704 - 33652648
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  33652704 cactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 33652648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 43431559 - 43431615
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  43431559 cactactagaaaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattc 43431615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 3823270 - 3823215
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || |||||    
T  3823270 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 3823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 6084246 - 6084300
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||| ||||||||||||||||||||||  ||||| || |||||||| |||||||    
T  6084246 cactaatagaaaaagcaaaattagggagataaattagtgacggaaaaaataaaat 6084300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 9915043 - 9915097
Alignment:
Q  199 ctactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||| ||| |||||| || |||||||| || ||||||    
T  9915043 ctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattc 9915097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 17003399 - 17003365
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    ||||||||||||||||||||||||||||| |||||    
T  17003399 cactactagaaaaagcaaaattagggaggaaaatt 17003365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 29351061 - 29351027
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  29351061 cactactagaaaaagcaaaattagcgagggaaatt 29351027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 30688073 - 30688040
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaat 230  Q
    |||||||||||||||||||||||| |||||||||    
T  30688073 cactactagaaaaagcaaaattagcgagggaaat 30688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13060931 - 13060987
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||| |||| ||||| || |||||||| || ||||||    
T  13060931 cactactagcaaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattc 13060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18010060 - 18010116
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||||||||||||||| ||| |||||| || |||||||| || ||||||    
T  18010060 cactaccagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattc 18010116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 21350615 - 21350559
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||| ||  ||||||||| || |||||||| || ||||||    
T  21350615 cactactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattc 21350559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 41637753 - 41637697
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41637753 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 41637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 29749402 - 29749459
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  29749402 gcactactagaaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattc 29749459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 27327751 - 27327695
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  27327751 cactactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattc 27327695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 30783473 - 30783417
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  30783473 cactactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattc 30783417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 31266490 - 31266433
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||    
T  31266490 gcactactaggaaaagtaaaattagggagggaaattttttacggaaaacataaaattc 31266433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 20065073 - 20065130
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  20065073 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 20065130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 37552363 - 37552306
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  37552363 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 37552306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 12779735 - 12779679
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  12779735 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 27039908 - 27039964
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  27039908 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattc 27039964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 41736307 - 41736251
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  41736307 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 41736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 43408511 - 43408567
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  43408511 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 43408567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 44476375 - 44476431
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  44476375 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 44476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 28319580 - 28319635
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  28319580 actactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 28319635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 22192314 - 22192260
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||||| |||||| |||||| || |||||||| |||||||    
T  22192314 cactactagaaaaagcaaaatcagggagagaaattagtgacggaaaaaataaaat 22192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 8430432 - 8430375
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||| | |||||||| || |||||||| |||||||||    
T  8430432 gcactactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattc 8430375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 32185968 - 32185911
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  32185968 gcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 32185911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 7093703 - 7093647
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||    
T  7093703 cactactagtaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 7093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13788055 - 13788111
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||  || |||||||| || ||||||    
T  13788055 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattc 13788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15636735 - 15636791
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  15636735 cactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 15636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 22140364 - 22140420
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  22140364 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 22140420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 28841342 - 28841398
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||| || ||||||    
T  28841342 cactactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 28841398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 21293711 - 21293766
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || |||||    
T  21293711 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatt 21293766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 23388379 - 23388434
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  23388379 actactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattc 23388434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 23857957 - 23857992
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatt 231  Q
    ||||||||||||||||||||||||| ||||||||||    
T  23857957 gcactactagaaaaagcaaaattagcgagggaaatt 23857992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 16098917 - 16098951
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||| ||||||||||||||||||||    
T  16098917 cactactagaaaaatcaaaattagggagggaaatt 16098951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 32009088 - 32009042
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||||||||||||||||||| |||| ||||| || ||||||||    
T  32009088 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaa 32009042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 37802379 - 37802433
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||||| |||||||    
T  37802379 cactactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaat 37802433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 44723067 - 44723033
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  44723067 cactactagaaaaagcaaaattagcgagggaaatt 44723033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 1141664 - 1141615
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  1141664 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 1141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 32300579 - 32300530
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  32300579 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 32300530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 12860235 - 12860275
Alignment:
Q  203 tagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    ||||||||||||||||||||||| ||||| || ||||||||    
T  12860235 tagaaaaagcaaaattagggaggaaaattagtgacggaaaa 12860275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18551253 - 18551309
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||| ||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  18551253 cactactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 18551309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 26243321 - 26243377
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| ||  ||| ||| |||||||||    
T  26243321 cactactagaaaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattc 26243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 36550970 - 36550918
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaa 249  Q
    |||||||||||||| ||||||||| |||||||||| || | |||||| |||||    
T  36550970 cactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaataaa 36550918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 50845330 - 50845386
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50845330 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 50845386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 13102455 - 13102399
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  13102455 cactactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattc 13102399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 14761006 - 14760950
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  14761006 cactactagaaaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattc 14760950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 12720948 - 12720892
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| |||||||||    
T  12720948 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattc 12720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 7830170 - 7830115
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||| |||||||||||||||||||||||||| | | |||||||||||||||    
T  7830170 cactactaggaaaagcaaaattagggagggaaatttatgatggaaaacataaaatt 7830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 6412053 - 6412109
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  6412053 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 6412109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 9109975 - 9110031
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  9109975 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 9110031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 28229455 - 28229511
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  28229455 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 28229511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 38531170 - 38531226
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||||||||||||  || |||||||| |||||||||    
T  38531170 cactactagaaaaagtaaaattagggagggaaataagtgacggaaaaaataaaattc 38531226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 41752573 - 41752517
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||||||||||||| || ||||||| || |||||||| ||||||||    
T  41752573 gcactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatt 41752517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 46790139 - 46790083
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  46790139 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 46790083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 51973563 - 51973507
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  51973563 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattc 51973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 8940994 - 8941049
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || |||||    
T  8940994 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 8941049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 29549557 - 29549502
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||||||||| |||||||||| || ||| |||| ||||||||    
T  29549557 cactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatt 29549502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 9177245 - 9177183
Alignment:
Q  191 aaatggcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||| ||||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  9177245 aaattgcactactagaaaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattc 9177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 12369951 - 12369997
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||    
T  12369951 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaa 12369997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 46865382 - 46865328
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| |||| |||||||||||||| || |||||||| |||||||    
T  46865382 cactactagaaaaagaaaaactagggagggaaattagtgacggaaaaaataaaat 46865328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 52183818 - 52183761
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||||  | |||||||| |||||||||    
T  52183818 gcactactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattc 52183761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 6459356 - 6459300
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||| ||||||| |||||||||| || |||||||| || ||||||    
T  6459356 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattc 6459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7181555 - 7181611
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| | |||||||    
T  7181555 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattc 7181611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 16913581 - 16913633
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||||||||||||||| ||||||||| || |||||||| |||||||||    
T  16913581 actaggaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattc 16913633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 20408160 - 20408216
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  20408160 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 20408216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 45839431 - 45839375
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  45839431 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 45839375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 46339445 - 46339501
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  46339445 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 46339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 50092298 - 50092354
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  50092298 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 50092354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 12989991 - 12989936
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||| ||||||||||||||| ||| |||||| || |||||||| ||||||||    
T  12989991 cactactaaaaaaagcaaaattagagagagaaattggtgacggaaaaaataaaatt 12989936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 25787998 - 25788053
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| |||| ||||| || |||||||| | |||||||    
T  25787998 actactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattc 25788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 27253855 - 27253910
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||| ||||||||||||| |||||  | |||||||| ||||||||    
T  27253855 cactactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatt 27253910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 48522657 - 48522602
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||||||||| |||| ||||| || || ||||| ||||||||    
T  48522657 cactactagaaaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatt 48522602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 46785964 - 46786013
Alignment:
Q  203 tagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||| |||||||||| || |||||||| || |||||    
T  46785964 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 46786013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 4340546 - 4340490
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  4340546 cactattagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattc 4340490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 9985327 - 9985383
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| |||||||||  ||||||||| || |||||||| || ||||||    
T  9985327 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattc 9985383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 13195722 - 13195666
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| ||||||||||||||||| ||| || | ||||||  ||||||||    
T  13195722 cactactagaaaatgcaaaattagggagggagattagtgatggaaaagttaaaattc 13195666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17200010 - 17200066
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||  || |||||||| || ||||||    
T  17200010 cactactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattc 17200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 17661189 - 17661133
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||  || ||||||| || |||||||| |||||||||    
T  17661189 cactattagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattc 17661133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22603687 - 22603631
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || | |||||| || ||||||    
T  22603687 cactactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattc 22603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 22789593 - 22789646
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||| |||||  ||||||||||||| ||||| || |||||||||||||||||    
T  22789593 cactactaaaaaaa--aaaattagggaggaaaattagtgacggaaaacataaaatt 22789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 30928388 - 30928432
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||| |||||||||| || |||||||| |||||||    
T  30928388 aaaagcaaaattagagagggaaattagtgacggaaaaaataaaat 30928432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 41120737 - 41120793
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || | |||||| || ||||||    
T  41120737 cactaatagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattc 41120793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 58721 - 58665
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  58721 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 58665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22083977 - 22083921
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22083977 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 22083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 11077785 - 11077732
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  11077785 tactagaaaaagaaaaattagggagggaaatttgtgacggaaaacataaaattc 11077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 11530364 - 11530309
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  11530364 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatt 11530309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 12951847 - 12951792
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  12951847 cactactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatt 12951792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 14772801 - 14772744
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  14772801 gcactattagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattc 14772744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 5360547 - 5360492
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| |||||||||    
T  5360547 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattc 5360492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 9885382 - 9885328
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  9885382 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 9885328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 11350315 - 11350265
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaa 250  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  11350315 tactaggaaaagcaaaattagggagggaaatttgtgacggaaaacaaaaaa 11350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 14872255 - 14872202
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  14872255 tactaggaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattc 14872202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 18033526 - 18033571
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaa 242  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  18033526 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaa 18033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 30833959 - 30834016
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  30833959 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 30834016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 6598603 - 6598547
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  6598603 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 6598547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 6605496 - 6605552
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  6605496 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 6605552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 9893102 - 9893046
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  9893102 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 9893046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15364458 - 15364514
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  15364458 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 15364514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 15448524 - 15448468
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  15448524 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 15448468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 24661009 - 24661065
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  24661009 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 24661065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 26224567 - 26224511
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  26224567 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 26224511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 28365050 - 28364994
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  28365050 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 28364994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 8844168 - 8844222
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||| ||||||||||||| || |||||||| |||||||    
T  8844168 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaat 8844222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 12157380 - 12157430
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||| ||||||||||| || |||||||| |||||||    
T  12157380 actagaaaaagcaaaattaaggagggaaattagtgacggaaaaaataaaat 12157430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 12200834 - 12200777
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  12200834 gcactgctagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 12200777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 495627 - 495683
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  495627 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattc 495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 1939242 - 1939298
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || || ||||| || ||||||    
T  1939242 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattc 1939298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 12351586 - 12351642
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| | ||||| ||||||||||| || |||||||| |||||||||    
T  12351586 cactactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattc 12351642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15961407 - 15961463
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  15961407 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 15961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 16250802 - 16250858
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  16250802 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 16250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 20182284 - 20182228
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  20182284 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattc 20182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 22153707 - 22153763
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  22153707 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattc 22153763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 22579349 - 22579405
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  22579349 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 22579405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 28668239 - 28668183
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||  || |||||||| |||||||||    
T  28668239 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattc 28668183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 14886700 - 14886646
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||| |||||||||||||||||||||| ||||| || || ||||| |||||||    
T  14886700 cactaccagaaaaagcaaaattagggaggaaaattagtgacagaaaaaataaaat 14886646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 21990175 - 21990209
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  21990175 cactactagaaaaagcaaaattagcgagggaaatt 21990209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 10458902 - 10458857
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||||||||| |||||||| |||||||||| || ||||||||    
T  10458902 actactagaaaaagtaaaattagtgagggaaattagtgacggaaaa 10458857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 21141075 - 21141022
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  21141075 tactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 21141022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 25398138 - 25398085
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  25398138 tactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 25398085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 27796835 - 27796868
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatt 231  Q
    ||||||||||||||||||||||| ||||||||||    
T  27796835 actactagaaaaagcaaaattagcgagggaaatt 27796868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 1955015 - 1954963
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||||||||||||||| ||||||||  || |||||||| |||||||||    
T  1955015 actaggaaaagcaaaattaggaagggaaatgagtgacggaaaaaataaaattc 1954963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 2669448 - 2669392
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || ||| |||| || ||||||    
T  2669448 cactactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattc 2669392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 5250278 - 5250222
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||| || |||||||||| || |||||||| || ||||||    
T  5250278 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattc 5250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 6978416 - 6978360
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||| |||||||||||||| |||||||||| || |||||||| || ||||||    
T  6978416 cactattaggaaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattc 6978360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 11049751 - 11049807
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| |||||||||  ||||||||| || |||||||| || ||||||    
T  11049751 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattc 11049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 12160847 - 12160903
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || ||| |||| || ||||||    
T  12160847 cactactagaaaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattc 12160903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25397788 - 25397844
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  25397788 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 25397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 33818561 - 33818617
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33818561 cactactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattc 33818617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 16121839 - 16121895
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| |||||||||    
T  16121839 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattc 16121895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 23423756 - 23423812
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||    
T  23423756 cactactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattc 23423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 12045867 - 12045810
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  12045867 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 12045810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8108860 - 8108916
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  8108860 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattc 8108916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 12328226 - 12328282
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  12328226 cactactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattc 12328282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 36196533 - 36196477
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  36196533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 36196477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 36597340 - 36597396
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||| |||||  |||||| | ||||||||||||||||||    
T  36597340 cactactagaaaaagcaaaatttgggagaaaaatttatgacggaaaacataaaattc 36597396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 38837671 - 38837727
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  38837671 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 38837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 13620127 - 13620181
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||| ||||||||||||| || |||||||| |||||||    
T  13620127 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaat 13620181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 618433 - 618377
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  618433 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 618377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 746868 - 746924
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  746868 cactacaagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 746924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 2472714 - 2472770
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| || ||||||| || |||||||| || ||||||    
T  2472714 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattc 2472770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 4125188 - 4125244
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  4125188 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattc 4125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7003730 - 7003786
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| | |||||||    
T  7003730 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattc 7003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 7888936 - 7888880
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  7888936 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattc 7888880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8886851 - 8886907
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| |||||||| ||| |||| || ||||||    
T  8886851 cactactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattc 8886907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 16631874 - 16631930
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  16631874 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 16631930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17039631 - 17039687
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  17039631 cactactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattc 17039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 35620344 - 35620396
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaa 249  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| |||||    
T  35620344 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaa 35620396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 5982785 - 5982739
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    ||||||||||||||||||||| || |||||||||| || ||||||||    
T  5982785 cactactagaaaaagcaaaatcagcgagggaaattagtgacggaaaa 5982739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 13974078 - 13974112
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  13974078 cactactagaaaaagcaaaattagcgagggaaatt 13974112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 36831890 - 36831924
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  36831890 cactactagaaaaagcaaaattagtgagggaaatt 36831924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 15061113 - 15061056
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||| ||||||||||||||||| |||||||||| || || ||||| || ||||||    
T  15061113 gcactaccagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattc 15061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 16464768 - 16464723
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaa 242  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||||    
T  16464768 cactactaggaaaggcaaaattagggagggaaattagtgacggaaa 16464723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 23409123 - 23409074
Alignment:
Q  194 tggcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    ||||||||||||||||||||||||||| |||  ||||| || ||||||||    
T  23409123 tggcactactagaaaaagcaaaattagcgagaaaaattagtgacggaaaa 23409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 29727894 - 29727939
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaa 241  Q
    |||||||||||||||| |||||||| |||||||||| || ||||||    
T  29727894 gcactactagaaaaagtaaaattagcgagggaaattagtgacggaa 29727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 40484183 - 40484138
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaa 242  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||    
T  40484183 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaa 40484138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 10494876 - 10494820
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||  ||| |||||||||| || |||||||| || ||||||    
T  10494876 cactactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattc 10494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17036412 - 17036468
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| |||||||||||||| || ||| || |||||| | |||||||||    
T  17036412 cactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattc 17036468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 20187941 - 20187997
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||| |||||||||||||| || ||||||| || |||||||| |||||||||    
T  20187941 cactattagcaaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattc 20187997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 20959647 - 20959591
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||||||| ||||   | |||||||| |||||||||    
T  20959647 cactactagaaaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattc 20959591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 26708585 - 26708641
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| |||||||||| |||||||||| ||  ||||||| || ||||||    
T  26708585 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattc 26708641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 26978319 - 26978375
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| |||||||||| |||||||||| ||  ||||||| || ||||||    
T  26978319 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattc 26978375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 28265475 - 28265531
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||| ||||| || |||||||| || ||||||    
T  28265475 cactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 28265531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 36716200 - 36716256
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || | |||||| || ||||||    
T  36716200 cactactagaaaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattc 36716256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 33914196 - 33914140
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  33914196 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 33914140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 9058952 - 9059007
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  9058952 cactactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatt 9059007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 5399746 - 5399690
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  5399746 cactactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattc 5399690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 30420033 - 30420089
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  30420033 cactactagaaaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattc 30420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 1638587 - 1638530
Alignment:
Q  194 tggcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||| |||| |||||||||||||||||||| || |||||||| |||||||    
T  1638587 tggcactactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaat 1638530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 27040024 - 27040081
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| | |||||||    
T  27040024 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattc 27040081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 4586758 - 4586814
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  4586758 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 4586814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 7111946 - 7112002
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  7111946 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 7112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22168405 - 22168349
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  22168405 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 22168349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 32175737 - 32175793
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| |||||||||    
T  32175737 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattc 32175793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 46286229 - 46286285
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| || ||||||| || |||||||| |||||||||    
T  46286229 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattc 46286285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 19839316 - 19839261
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || |||||    
T  19839316 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 19839261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 24682328 - 24682383
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| |||||||||||||||||||  | |||||||| |||||||||    
T  24682328 actactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattc 24682383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 22128312 - 22128366
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||| |||||| ||||||||||||| || |||||||| |||||||    
T  22128312 cactactagaaaaaacaaaatcagggagggaaattagtgacggaaaaaataaaat 22128366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 25147848 - 25147802
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||    
T  25147848 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattc 25147802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 55309212 - 55309258
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||    
T  55309212 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaa 55309258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 5473987 - 5473930
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||| ||| || ||||||    
T  5473987 gcactactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattc 5473930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 13564915 - 13564960
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaa 242  Q
    |||||||||||||||||||||||| |||||||||| || |||||||    
T  13564915 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 13564960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 30508125 - 30508068
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||| |||| |||||||||    
T  30508125 gcactactagaaaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattc 30508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 9238625 - 9238681
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||| ||||||||||||||| |||||||||| || |||||||| || ||||||    
T  9238625 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 9238681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 9670479 - 9670535
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  9670479 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 9670535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 18715039 - 18714983
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||| ||||| |||||||||  || |||||||| |||||||||    
T  18715039 cactactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattc 18714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 30268988 - 30269044
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||  || |||||||| || ||||||    
T  30268988 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattc 30269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 30283201 - 30283145
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||  || |||||||| || ||||||    
T  30283201 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattc 30283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 38619984 - 38619928
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  38619984 cactactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattc 38619928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 38645887 - 38645831
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  38645887 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattc 38645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 42055534 - 42055478
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||| ||| ||| |||| || ||||||    
T  42055534 cactactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattc 42055478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 44783620 - 44783564
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||    
T  44783620 cactactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattc 44783564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 45091398 - 45091342
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  45091398 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 45091342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 4627079 - 4627134
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  4627079 actactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattc 4627134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 4606829 - 4606883
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||| ||||| ||||||||||||||||||| || ||||| || |||||||    
T  4606829 cactactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaat 4606883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 8879020 - 8878966
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||| |||||||||||||| || |||||||||| || |||||||| |||||||    
T  8879020 cactacaagaaaaagcaaaatcagagagggaaattagtgacggaaaaaataaaat 8878966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 16915506 - 16915452
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||||| ||||||| ||||| || | |||||| |||||||    
T  16915506 cactactagaaaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaat 16915452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 25225234 - 25225180
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||||||||||||||||   | |||||||| |||||||    
T  25225234 cactactagaaaaagaaaaattagggagggaaatcaatgacggaaaatataaaat 25225180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 39235071 - 39235022
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacgg-aaaacataaaatt 252  Q
    ||||||| |||||||||||||||||| |||| |||| |||||||||||||    
T  39235071 agaaaaaccaaaattagggagggaaacttgtaacggaaaaacataaaatt 39235022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 18051969 - 18051921
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||||| |||||||||| || |||||||| || |||||    
T  18051969 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatt 18051921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 19680424 - 19680480
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| ||||||| || || |||||||| || ||||||    
T  19680424 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattc 19680480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 38223643 - 38223591
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| | ||||||||||||||| ||| || |||||||| |||||||||    
T  38223643 actagaaaatgtaaaattagggagggagattagtgacggaaaaaataaaattc 38223591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 45532579 - 45532635
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||  |||||||||| || |||||||| || ||||||    
T  45532579 cactattagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattc 45532635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 54539423 - 54539367
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||| ||||| || |||||||| || ||||||    
T  54539423 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattc 54539367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15063992 - 15064048
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15063992 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 15064048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19610473 - 19610417
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19610473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 19610417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 30219473 - 30219417
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  30219473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 30219417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 16299996 - 16299940
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  16299996 cactactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattc 16299940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 37283658 - 37283602
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  37283658 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 37283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 5744552 - 5744497
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  5744552 gcactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaat 5744497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 5781511 - 5781456
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  5781511 gcactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaat 5781456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 29216127 - 29216071
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  29216127 cactactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattc 29216071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 20761949 - 20762004
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  20761949 gcactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 20762004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 5565857 - 5565803
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  5565857 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaat 5565803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 21020200 - 21020146
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||    
T  21020200 cactactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaat 21020146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 43329762 - 43329819
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  43329762 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 43329819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 50665635 - 50665692
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||  |||||||||||||| ||||||||||| | ||||||||||||||||||    
T  50665635 gcactactaagaaaagcaaaattagagagggaaatttatgacggaaaacataaaattc 50665692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 5261072 - 5261016
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  5261072 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 5261016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 6447246 - 6447302
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||||||||||||| || | |||||| |||||||||    
T  6447246 cactactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattc 6447302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 8110474 - 8110418
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  8110474 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 8110418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19223584 - 19223528
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  19223584 cactactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattc 19223528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 27449223 - 27449167
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  27449223 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 27449167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 48404995 - 48404939
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  48404995 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 48404939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 11915892 - 11915837
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  11915892 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattc 11915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 46012727 - 46012782
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||||||||||| ||||||| ||||| || |||||||| |||||||    
T  46012727 gcactactagaaaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaat 46012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 18091546 - 18091603
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||| || ||||||    
T  18091546 gcactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 18091603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 27969049 - 27968996
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    |||||||||||||||||||| ||||||||||||| || |||||| | |||||||    
T  27969049 actactagaaaaagcaaaatcagggagggaaattagtgacggaacaaataaaat 27968996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 3461310 - 3461366
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| || ||||||| || || ||||| |||||||||    
T  3461310 cactactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattc 3461366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 9652713 - 9652657
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||| | |||||||||| || |||||||| || ||||||    
T  9652713 cactactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattc 9652657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 10941665 - 10941721
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  10941665 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattc 10941721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 11007683 - 11007739
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  11007683 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattc 11007739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 11219274 - 11219218
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||| ||||||||| |||||||||| || |||||||| || |||||    
T  11219274 gcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatt 11219218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13905038 - 13905094
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||| |||||| || |||||||| || ||||||    
T  13905038 cactactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattc 13905094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 13921460 - 13921404
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  13921460 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 13921404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18104530 - 18104586
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  18104530 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattc 18104586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 19269864 - 19269920
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  19269864 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 19269920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 21816856 - 21816800
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || ||||||    
T  21816856 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattc 21816800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 23233184 - 23233224
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcac 237  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  23233184 cactattagaaaaagcaaaattagggagggaaatttctcac 23233224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 25882705 - 25882649
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  25882705 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 25882649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 26098948 - 26098892
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || | |||||| || ||||||    
T  26098948 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattc 26098892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 26390634 - 26390690
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| ||| |||||| || |||||||| || ||||||    
T  26390634 cactactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattc 26390690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 31250223 - 31250167
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||| ||||||||||||||| | ||| || |||||||| |||||||||    
T  31250223 cactactagaaaatgcaaaattagggaggaagattagtgacggaaaaaataaaattc 31250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 1628353 - 1628294
Alignment:
Q  194 tggcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||||||||||| |||||||||||||||||||  | | |||||| |||||||||    
T  1628353 tggcattactagaaaaagtaaaattagggagggaaattaatgatggaaaaaataaaattc 1628294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 29236179 - 29236124
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||| |||||||||||||||||| |||||||||| || |||||||| || |||||    
T  29236179 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatt 29236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 1745488 - 1745534
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaa 243  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||    
T  1745488 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaa 1745534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 10803856 - 10803822
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||| ||||||||||||||||||    
T  10803856 cactactagaaaaagccaaattagggagggaaatt 10803822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 21088885 - 21088831
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||  ||||||||| ||||||||||||||| || |||||||| |||||||    
T  21088885 cactactaagaaaagcaaagttagggagggaaattagtgacggaaaaaataaaat 21088831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 36543884 - 36543830
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||||||||||| ||||| || | |||||| |||||||    
T  36543884 cactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaat 36543830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 36564439 - 36564493
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||||||||| ||||||||||||| ||||| || | |||||| |||||||    
T  36564439 cactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaat 36564493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 49915586 - 49915532
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaat 251  Q
    ||||||||  ||||| |||||||  ||||||||||||| ||||||||||||||||    
T  49915586 cactactaagaaaagtaaaattaaagagggaaatttgtgacggaaaacataaaat 49915532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 11837213 - 11837270
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||| |||||||||| || | |||||| || ||||||    
T  11837213 gcactactagaaaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattc 11837270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 18539932 - 18539883
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  18539932 agaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattc 18539883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 4393357 - 4393405
Alignment:
Q  204 agaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||||| |||||||||| || |||||||| || |||||    
T  4393357 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatt 4393405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 6088228 - 6088284
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||| ||  ||||||||| || |||||||| || ||||||    
T  6088228 cactactagaaaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattc 6088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 8428306 - 8428250
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||  |||||||| |||||||||| || |||||||| || ||||||    
T  8428306 cactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattc 8428250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 8546380 - 8546324
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||| ||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  8546380 cactaccagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 8546324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 17762777 - 17762721
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||| | ||||||||| |||||||||| || |||||||| || ||||||    
T  17762777 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 17762721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 18380159 - 18380103
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||  || |||||||| || ||||||    
T  18380159 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattc 18380103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19064097 - 19064041
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||| | ||||||||| |||||||||| || |||||||| || ||||||    
T  19064097 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 19064041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 29956507 - 29956451
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || | |||||| || ||||||    
T  29956507 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattc 29956451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 30005662 - 30005606
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || | |||||| || ||||||    
T  30005662 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattc 30005606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 10298 - 10241
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10298 gcactgctaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattc 10241  T

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Target: scaffold0058 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 74541 - 74597
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  74541 cactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattc 74597  T

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Target: scaffold0576 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 9229 - 9285
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  9229 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattc 9285  T

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Target: scaffold0599 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 7643 - 7588
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  7643 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattc 7588  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 219776 - 219719
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||| || ||||||| || |||||||| || ||||||    
T  219776 gcactactagaaaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattc 219719  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 182668 - 182614
Alignment:
Q  198 actactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    |||||||||||||| |||||||| |||||||||| || |||||||| || |||||    
T  182668 actactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatt 182614  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 274664 - 274721
Alignment:
Q  196 gcactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  274664 gcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 274721  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 3881 - 3825
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||| || ||||||    
T  3881 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattc 3825  T

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Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 202913 - 202858
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaatt 252  Q
    ||||||||||||||| |||||||| |||||||||| || |||||||| || |||||    
T  202913 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaatt 202858  T

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Target: scaffold0655 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 3162 - 3214
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaa 249  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||| |||||    
T  3162 cactaatagaaaaagaaaaattagggagggaaattagtgacggaaaagataaa 3214  T

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Target: scaffold0603 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 5979 - 6035
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  5979 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 6035  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 14990 - 15046
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || || ||||| || ||||||    
T  14990 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattc 15046  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19742 - 19686
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  19742 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattc 19686  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 10663 - 10719
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||| ||||||||||||||||||| |||||||||| || |||||||| || ||||||    
T  10663 cactgctagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 10719  T

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Target: scaffold0108 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 12791 - 12735
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||| |||||||||||||||| |||||||||| || |||||||| || ||||||    
T  12791 cactacttgaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattc 12735  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 26622 - 26566
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| || ||||||| || |||||||| || ||||||    
T  26622 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattc 26566  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 39703 - 39759
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || | |||||| || ||||||    
T  39703 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattc 39759  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22350 - 22294
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||||||| |||||||||| || ||| |||| || ||||||    
T  22350 cactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattc 22294  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17617 - 17673
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||| || ||||||    
T  17617 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattc 17673  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 84442 - 84386
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| || ||||||    
T  84442 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattc 84386  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8110 - 8166
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  8110 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattc 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 21842 - 21898
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  21842 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattc 21898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 918 - 952
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatt 231  Q
    |||||||||||||||||||||||| ||||||||||    
T  918 cactactagaaaaagcaaaattagcgagggaaatt 952  T

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Target: scaffold0502 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 11021 - 10975
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||||    
T  11021 aaaagcaaaattagggaaggaaatttgtgacgaaaaatataaaattc 10975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 6931 - 6878
Alignment:
Q  200 tactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||||||||| ||||||||||  | |||||||| || ||||||    
T  6931 tactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattc 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 37787 - 37843
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||| |||||||||   |||||||| || |||||||| |||||||||    
T  37787 cactactagaaaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattc 37843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 44056 - 44000
Alignment:
Q  197 cactactagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    ||||||||||||||| |||||||| |||||||||| || | |||||| || ||||||    
T  44056 cactactagaaaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattc 44000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 84678 - 84730
Alignment:
Q  201 actagaaaaagcaaaattagggagggaaatttgtcacggaaaacataaaattc 253  Q
    |||||||||||||||||||| |||||||||| || || ||||| || ||||||    
T  84678 actagaaaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattc 84730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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