View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17099_low_19 (Length: 208)
Name: NF17099_low_19
Description: NF17099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17099_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 11571545 - 11571639
Alignment:
| Q |
98 |
tatacattaattctatgttttttattttaggcacatgcaacaagttgtgttagcaaatctttgaaatggtggaagaagaacttgaaggctaatat |
192 |
Q |
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| T |
11571545 |
tatacattaattctatgttttttattttaggcacatgcaacaagttgtgttagcaaatcattgaaatggtggaagaagaacttgaaggctaatat |
11571639 |
T |
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