View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1709R-Insertion-11 (Length: 232)
Name: NF1709R-Insertion-11
Description: NF1709R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1709R-Insertion-11 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 232
Target Start/End: Original strand, 28828794 - 28829018
Alignment:
| Q |
8 |
aagaagaagaagcacaacttctatgattgttttgttgttgtggtgttgaaggagacatataggaatttgggtaaggaaaattgatggaattagaatagtc |
107 |
Q |
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| T |
28828794 |
aagaagaagaagcacaacttctatgattgttttgttgttgtggtgttgaaggagaaatataggaatttgggtaaggaaaattgatggaattagaatagtc |
28828893 |
T |
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| Q |
108 |
tctagaatctctagaacgttttcttaatggaggaacattataggtgagaccactatcagagttcatagcagttttctgaggtaatgaatctgttgttatt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
28828894 |
tctagaatctctagaacgttttcttaatggaggaacattataggtgagaccactatcagagttcatagcagttttctgaggtaatgaatcggttgttatt |
28828993 |
T |
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| Q |
208 |
gagttgtaaggtggaagaatcatag |
232 |
Q |
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| T |
28828994 |
gagttgtaaggtggaagaatcatag |
28829018 |
T |
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