View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1709R-Insertion-12 (Length: 224)
Name: NF1709R-Insertion-12
Description: NF1709R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1709R-Insertion-12 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 30506979 - 30507194
Alignment:
| Q |
9 |
ttgagatggcgacaggaaaaagtatgaaaggtaaaaattggggtaaagaacatgattctgttttcttcacactataggttgaaactttgaatgacagttc |
108 |
Q |
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| T |
30506979 |
ttgagatggcgacaggaaaaagtatgaaaggtaaaaattggggtaaagaacatgattctgttttcttcacactataggttgaaactttgaatgacagttc |
30507078 |
T |
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| Q |
109 |
ctttctcattgactggtatgcctctattaatttccccctttctttttactaccattgtatttcccttccctagagagaaaaataaaactttaatttctta |
208 |
Q |
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| T |
30507079 |
ctttctcattgactggtatgcctctattaatttccccctttctttttactaccattttatttcccttccctagagagagaaataaaactttaatttctta |
30507178 |
T |
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| Q |
209 |
tactgttttgtcccta |
224 |
Q |
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| T |
30507179 |
tgctgttttgtcccta |
30507194 |
T |
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