View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1709_high_31 (Length: 285)
Name: NF1709_high_31
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1709_high_31 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 32784396 - 32784662
Alignment:
| Q |
1 |
tcatgcctacagtatgatgcctcatacaaaaggatataaatggcatcaatgtactagtactaaaaatgtcagcactgtgatttagttagagttaactaca |
100 |
Q |
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| T |
32784396 |
tcatgccaacagtatgatgtatcatacaaaaggatataaatggcatcaatgtactagtactaaaaatgtcagcactgtgatttagttagagttaactaca |
32784495 |
T |
|
| Q |
101 |
tatttatggttattttattggaatcgtgtgcacagttgagttattatatgaagtaaatacaaaaccaagttgtgcatgtggtttctcattgaaggataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32784496 |
tatttatggttattttattggaatcgtgtgcacagttgagttattatatgaagtaaatacaaaaccaagttgtgcatgtggtttctcattgaaggataaa |
32784595 |
T |
|
| Q |
201 |
ggttaagtggttagaacttagaagtggcaactactatttaactcaaataagtagtgccagcgctgaa |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32784596 |
ggttaagtggttagaacttagaagtggcaactactatttaactcaaataagtagtgccagcgctgaa |
32784662 |
T |
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