View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1709_high_60 (Length: 220)
Name: NF1709_high_60
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1709_high_60 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 7512040 - 7511855
Alignment:
| Q |
16 |
aagaatattcaaaccaacaacatcataagcaaccaaactaatcttctccctcaactttctaacaaaccctttaccaaattcaaaaccagcatgtttaaaa |
115 |
Q |
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| T |
7512040 |
aagaatattcaaaccaacaacatcataagcaatcaaactaatcctctccctcaactttctcacaaaccctttaccaaattcaaaaccagcatgtttaaaa |
7511941 |
T |
|
| Q |
116 |
atgatccctttatatctatcaaaagcagcatcaagaataggagaagaagcaacaccaccatttccaatgactgaaagagtgagtaa |
201 |
Q |
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| T |
7511940 |
atgatccctttatatctatcaaaagcagcatcaagaataggagaagaagcaacaccaccatttccaatgactgaaagagtgagtaa |
7511855 |
T |
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