View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1709_low_24 (Length: 327)

Name: NF1709_low_24
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1709_low_24
NF1709_low_24
[»] chr6 (45 HSPs)
chr6 (18-311)||(2732893-2733186)
chr6 (189-269)||(14399814-14399893)
chr6 (159-270)||(1912458-1912569)
chr6 (189-307)||(33532473-33532590)
chr6 (211-307)||(2457180-2457273)
chr6 (201-289)||(28640488-28640576)
chr6 (189-279)||(11602521-11602611)
chr6 (168-284)||(7939859-7939975)
chr6 (208-279)||(9163745-9163816)
chr6 (208-274)||(26373077-26373143)
chr6 (176-253)||(9074105-9074182)
chr6 (208-268)||(9194433-9194493)
chr6 (172-231)||(33282734-33282793)
chr6 (206-264)||(653351-653409)
chr6 (189-267)||(770343-770421)
chr6 (206-244)||(2231090-2231128)
chr6 (180-254)||(14933137-14933211)
chr6 (205-283)||(21869848-21869926)
chr6 (189-279)||(29243074-29243164)
chr6 (207-241)||(33735435-33735469)
chr6 (199-284)||(1906845-1906930)
chr6 (189-266)||(2766868-2766945)
chr6 (221-274)||(4886204-4886257)
chr6 (207-280)||(8432017-8432090)
chr6 (208-268)||(264555-264615)
chr6 (194-266)||(6012248-6012320)
chr6 (205-261)||(14933023-14933079)
chr6 (201-285)||(33996332-33996416)
chr6 (189-236)||(739704-739751)
chr6 (203-266)||(5730189-5730252)
chr6 (189-236)||(19390976-19391023)
chr6 (147-218)||(30532117-30532188)
chr6 (172-231)||(33260438-33260497)
chr6 (201-252)||(33851279-33851330)
chr6 (222-268)||(3736992-3737038)
chr6 (210-268)||(26494408-26494466)
chr6 (212-282)||(31322632-31322702)
chr6 (208-282)||(31694723-31694797)
chr6 (172-234)||(33386192-33386254)
chr6 (246-311)||(2496383-2496447)
chr6 (202-235)||(4354338-4354371)
chr6 (169-234)||(9075206-9075271)
chr6 (217-270)||(29404955-29405008)
chr6 (199-236)||(32392369-32392406)
chr6 (208-268)||(24769309-24769369)
[»] chr1 (38 HSPs)
chr1 (199-282)||(15606321-15606404)
chr1 (184-268)||(7347693-7347777)
chr1 (189-268)||(6025952-6026031)
chr1 (200-270)||(17473136-17473206)
chr1 (207-284)||(52517064-52517141)
chr1 (207-274)||(30882449-30882515)
chr1 (208-282)||(44417783-44417857)
chr1 (143-268)||(43391470-43391595)
chr1 (199-268)||(47847982-47848050)
chr1 (199-265)||(3240482-3240548)
chr1 (145-307)||(15794004-15794165)
chr1 (200-268)||(15955893-15955961)
chr1 (210-266)||(32868272-32868328)
chr1 (208-263)||(33651660-33651715)
chr1 (199-261)||(15592675-15592737)
chr1 (189-239)||(26161587-26161637)
chr1 (199-268)||(3950673-3950742)
chr1 (189-270)||(7991516-7991597)
chr1 (199-268)||(15923758-15923827)
chr1 (180-285)||(26360296-26360401)
chr1 (207-268)||(32721421-32721482)
chr1 (217-268)||(11766188-11766237)
chr1 (184-268)||(12764017-12764101)
chr1 (200-284)||(28067473-28067557)
chr1 (191-262)||(400901-400972)
chr1 (199-274)||(11049047-11049122)
chr1 (207-254)||(46331109-46331156)
chr1 (202-268)||(3335145-3335211)
chr1 (208-265)||(4541583-4541638)
chr1 (207-281)||(15190855-15190929)
chr1 (189-265)||(15364936-15365009)
chr1 (205-255)||(19392212-19392262)
chr1 (201-279)||(50322030-50322108)
chr1 (207-268)||(14643201-14643262)
chr1 (211-268)||(15956878-15956935)
chr1 (207-263)||(1880082-1880137)
chr1 (208-268)||(46937570-46937630)
chr1 (211-283)||(48432631-48432703)
[»] chr7 (38 HSPs)
chr7 (200-284)||(7245942-7246026)
chr7 (201-282)||(6894305-6894386)
chr7 (200-270)||(1110401-1110471)
chr7 (199-268)||(38774312-38774381)
chr7 (189-264)||(24942499-24942574)
chr7 (207-281)||(2219525-2219599)
chr7 (146-268)||(30900051-30900173)
chr7 (214-268)||(39417762-39417816)
chr7 (199-268)||(23747323-23747392)
chr7 (168-268)||(38921262-38921362)
chr7 (212-270)||(1109354-1109412)
chr7 (206-268)||(13380906-13380968)
chr7 (200-254)||(21451517-21451571)
chr7 (158-268)||(23218571-23218681)
chr7 (229-282)||(400623-400676)
chr7 (199-236)||(5260422-5260459)
chr7 (211-268)||(21450959-21451016)
chr7 (205-253)||(8095907-8095955)
chr7 (208-268)||(23117360-23117420)
chr7 (189-253)||(44124546-44124610)
chr7 (189-268)||(1662624-1662703)
chr7 (189-236)||(10455094-10455141)
chr7 (147-234)||(24673364-24673451)
chr7 (204-267)||(33007893-33007955)
chr7 (207-266)||(37233722-37233781)
chr7 (199-282)||(38622871-38622954)
chr7 (212-282)||(7982345-7982415)
chr7 (224-282)||(21343694-21343752)
chr7 (211-281)||(25268805-25268875)
chr7 (208-250)||(30885321-30885363)
chr7 (188-270)||(33581726-33581808)
chr7 (200-234)||(40869547-40869581)
chr7 (210-275)||(30408257-30408321)
chr7 (189-282)||(31838837-31838929)
chr7 (207-268)||(32231762-32231823)
chr7 (188-241)||(32888963-32889016)
chr7 (199-232)||(34925312-34925345)
chr7 (209-281)||(25314032-25314104)
[»] chr5 (40 HSPs)
chr5 (207-282)||(11257714-11257789)
chr5 (199-276)||(21047059-21047136)
chr5 (219-268)||(39647139-39647188)
chr5 (168-268)||(7430118-7430218)
chr5 (204-268)||(27731590-27731654)
chr5 (199-282)||(39159727-39159810)
chr5 (199-280)||(16973824-16973905)
chr5 (141-281)||(34156643-34156783)
chr5 (204-268)||(41894417-41894481)
chr5 (200-302)||(40677960-40678061)
chr5 (207-269)||(41015003-41015065)
chr5 (199-268)||(6202589-6202658)
chr5 (159-307)||(6586482-6586627)
chr5 (207-268)||(33342728-33342789)
chr5 (201-282)||(41991173-41991254)
chr5 (211-284)||(43283418-43283491)
chr5 (143-254)||(9446286-9446400)
chr5 (207-283)||(31029562-31029638)
chr5 (208-276)||(40990949-40991017)
chr5 (245-307)||(8977426-8977485)
chr5 (211-282)||(16033019-16033090)
chr5 (199-282)||(29466168-29466250)
chr5 (209-243)||(17855226-17855260)
chr5 (198-268)||(18551479-18551549)
chr5 (246-284)||(18839185-18839223)
chr5 (208-270)||(19115099-19115160)
chr5 (210-268)||(20981270-20981328)
chr5 (200-270)||(40213882-40213951)
chr5 (199-269)||(41376333-41376402)
chr5 (239-268)||(1792110-1792139)
chr5 (209-274)||(7477556-7477621)
chr5 (199-268)||(14956693-14956762)
chr5 (207-268)||(38346862-38346923)
chr5 (222-275)||(39647243-39647296)
chr5 (199-243)||(631483-631527)
chr5 (159-235)||(4787945-4788021)
chr5 (211-243)||(13996378-13996410)
chr5 (202-254)||(34451993-34452045)
chr5 (205-265)||(37056370-37056430)
chr5 (207-235)||(41399570-41399598)
[»] chr2 (37 HSPs)
chr2 (161-246)||(27317996-27318081)
chr2 (212-279)||(33958230-33958297)
chr2 (199-269)||(26174925-26174994)
chr2 (189-270)||(11530027-11530108)
chr2 (208-267)||(41631885-41631944)
chr2 (189-264)||(42616723-42616798)
chr2 (179-273)||(17442941-17443035)
chr2 (204-284)||(44458225-44458305)
chr2 (205-268)||(4204949-4205011)
chr2 (197-252)||(18569435-18569490)
chr2 (168-275)||(31790447-31790554)
chr2 (206-277)||(39597568-39597639)
chr2 (212-282)||(20547095-20547165)
chr2 (180-268)||(2045047-2045133)
chr2 (211-269)||(11328128-11328188)
chr2 (208-253)||(28044715-28044760)
chr2 (199-268)||(28804336-28804405)
chr2 (190-231)||(32321501-32321542)
chr2 (207-256)||(33971657-33971706)
chr2 (183-235)||(3110516-3110568)
chr2 (198-282)||(20265521-20265605)
chr2 (200-268)||(29378509-29378577)
chr2 (199-263)||(29728763-29728827)
chr2 (204-235)||(12749997-12750028)
chr2 (208-270)||(16733711-16733773)
chr2 (208-262)||(29415748-29415802)
chr2 (200-242)||(31235209-31235251)
chr2 (207-268)||(18104051-18104112)
chr2 (199-268)||(25694401-25694470)
chr2 (206-235)||(44460364-44460393)
chr2 (200-240)||(31246953-31246993)
chr2 (189-269)||(32562372-32562450)
chr2 (208-268)||(33623675-33623735)
chr2 (192-240)||(35538056-35538104)
chr2 (208-236)||(36300414-36300442)
chr2 (199-275)||(38475860-38475936)
chr2 (204-268)||(42172801-42172865)
[»] chr3 (34 HSPs)
chr3 (199-267)||(25252041-25252109)
chr3 (208-280)||(32251006-32251078)
chr3 (189-264)||(50402635-50402710)
chr3 (199-268)||(43381176-43381245)
chr3 (204-268)||(15802573-15802637)
chr3 (199-282)||(38692427-38692510)
chr3 (168-243)||(50251516-50251591)
chr3 (207-254)||(53855744-53855791)
chr3 (207-285)||(21754221-21754299)
chr3 (209-266)||(25490545-25490602)
chr3 (214-282)||(14199985-14200053)
chr3 (208-284)||(48236287-48236363)
chr3 (208-282)||(10275819-10275894)
chr3 (208-270)||(2990983-2991045)
chr3 (208-274)||(6994327-6994393)
chr3 (207-268)||(11338510-11338573)
chr3 (223-267)||(16169188-16169232)
chr3 (179-266)||(29279205-29279293)
chr3 (188-268)||(31386057-31386136)
chr3 (214-266)||(51295684-51295736)
chr3 (207-255)||(54842196-54842244)
chr3 (210-253)||(27016927-27016970)
chr3 (208-266)||(20690081-20690139)
chr3 (189-247)||(42064160-42064218)
chr3 (222-283)||(48198079-48198141)
chr3 (188-273)||(1813265-1813349)
chr3 (209-270)||(24830135-24830196)
chr3 (200-285)||(32954243-32954328)
chr3 (202-235)||(39544175-39544208)
chr3 (180-253)||(43307600-43307673)
chr3 (199-232)||(50376231-50376264)
chr3 (208-268)||(162903-162963)
chr3 (208-268)||(29208265-29208325)
chr3 (207-235)||(34363256-34363284)
[»] chr8 (39 HSPs)
chr8 (207-264)||(33120560-33120617)
chr8 (208-268)||(2302706-2302766)
chr8 (170-282)||(27483037-27483149)
chr8 (178-268)||(30560088-30560179)
chr8 (204-282)||(26273036-26273114)
chr8 (207-268)||(8282849-8282910)
chr8 (189-282)||(21226911-21227004)
chr8 (199-284)||(37632120-37632205)
chr8 (207-268)||(45371098-45371159)
chr8 (200-283)||(4050427-4050511)
chr8 (201-284)||(27400521-27400604)
chr8 (189-247)||(13869826-13869884)
chr8 (207-265)||(30692459-30692517)
chr8 (189-270)||(29749219-29749300)
chr8 (168-236)||(3556650-3556718)
chr8 (203-307)||(24857327-24857430)
chr8 (189-273)||(40710077-40710160)
chr8 (190-280)||(13850991-13851079)
chr8 (227-270)||(18737690-18737733)
chr8 (209-280)||(24855531-24855602)
chr8 (189-264)||(26445499-26445574)
chr8 (208-267)||(32616769-32616828)
chr8 (200-235)||(44617697-44617732)
chr8 (208-274)||(9112412-9112478)
chr8 (199-269)||(12196923-12196992)
chr8 (199-269)||(12441351-12441420)
chr8 (189-282)||(2701657-2701749)
chr8 (207-268)||(4114736-4114796)
chr8 (210-279)||(14928232-14928301)
chr8 (205-234)||(16950289-16950318)
chr8 (208-269)||(42843363-42843424)
chr8 (207-268)||(44806258-44806319)
chr8 (189-284)||(1318620-1318716)
chr8 (220-268)||(3238297-3238345)
chr8 (215-279)||(8284356-8284420)
chr8 (209-284)||(12856408-12856481)
chr8 (199-283)||(14730294-14730378)
chr8 (189-261)||(39550949-39551021)
chr8 (200-284)||(43935142-43935226)
[»] chr4 (45 HSPs)
chr4 (199-268)||(415145-415214)
chr4 (210-271)||(55314493-55314554)
chr4 (208-268)||(13298529-13298589)
chr4 (199-274)||(50794568-50794643)
chr4 (189-255)||(34581592-34581658)
chr4 (209-262)||(2843583-2843636)
chr4 (189-268)||(3301608-3301687)
chr4 (137-268)||(7295045-7295176)
chr4 (203-282)||(17223403-17223482)
chr4 (211-282)||(20709960-20710031)
chr4 (199-282)||(25402826-25402909)
chr4 (196-259)||(31675030-31675093)
chr4 (202-268)||(27722407-27722473)
chr4 (201-263)||(34417827-34417889)
chr4 (190-235)||(3144541-3144586)
chr4 (208-268)||(37538421-37538484)
chr4 (207-268)||(37579590-37579651)
chr4 (208-273)||(48244443-48244508)
chr4 (188-233)||(56049770-56049815)
chr4 (207-247)||(1202394-1202434)
chr4 (200-284)||(1276902-1276986)
chr4 (200-268)||(2562482-2562550)
chr4 (199-235)||(20989525-20989561)
chr4 (158-282)||(39032511-39032635)
chr4 (201-284)||(13458783-13458866)
chr4 (200-235)||(18968308-18968343)
chr4 (208-266)||(19062218-19062274)
chr4 (243-282)||(39064896-39064935)
chr4 (199-266)||(47789165-47789232)
chr4 (201-267)||(26275534-26275600)
chr4 (208-274)||(33714228-33714294)
chr4 (201-255)||(34417346-34417400)
chr4 (215-269)||(38596717-38596771)
chr4 (207-236)||(4762551-4762580)
chr4 (215-268)||(9318706-9318759)
chr4 (246-311)||(27098969-27099033)
chr4 (207-268)||(47486045-47486106)
chr4 (201-266)||(53768201-53768266)
chr4 (208-252)||(681986-682030)
chr4 (222-282)||(3625744-3625804)
chr4 (168-244)||(8721885-8721961)
chr4 (208-268)||(30617270-30617329)
chr4 (208-268)||(34416907-34416967)
chr4 (199-243)||(37854003-37854047)
chr4 (199-235)||(41367197-41367233)
[»] scaffold0428 (2 HSPs)
scaffold0428 (172-231)||(11459-11518)
scaffold0428 (172-231)||(4494-4553)
[»] scaffold0940 (1 HSPs)
scaffold0940 (201-283)||(2031-2113)
[»] scaffold0491 (1 HSPs)
scaffold0491 (227-270)||(4389-4432)
[»] scaffold0041 (1 HSPs)
scaffold0041 (200-234)||(96701-96735)
[»] scaffold0898 (1 HSPs)
scaffold0898 (207-268)||(534-594)
[»] scaffold0223 (1 HSPs)
scaffold0223 (137-268)||(10608-10740)
[»] scaffold0194 (1 HSPs)
scaffold0194 (200-268)||(13786-13854)


Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 2733186 - 2732893
Alignment:
Q  18 ccattttcaaagggtcaatgtgtcatttgatggccaaagttagagatatctccgtgctacaatctgtgtttatatattcactattaagggctgttttact 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733186 ccattttcaaagggtcaatgtgtcatttgatggccaaagttagagatatctccgtgctacaatctgtgtttatatattcactattaagggctgttttact 2733087  T
Q  118 gattgtatgtgatacaatgttgtcaatcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgaca 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733086 gattgtatgtgatacattgttgtcaatcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgaca 2732987  T
Q  218 acattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2732986 acattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataatgccgctatttaacaatatt 2732893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 14399893 - 14399814
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||| ||||||    
T  14399893 tatagagcctctatagctgctatttgacaacactttgtactaaatagc-tatcacaaaacaatagcggtttgtttaaattt 14399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 1912458 - 1912569
Alignment:
Q  159 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatt 258  Q
    |||||||  ||||||||||| |||  ||  ||||||| | ||||||  |||||||||||| | |||||||||||||| |||||||| |||||||||||||    
T  1912458 gtttgttcaaattccgctatgcaacggtgctatagcgtcactatagtcgctatttgacaataatttgtactaaatagtatatcgcagaacaatagcgatt 1912557  T
Q  259 tgttcaaatttc 270  Q
    ||||||||||||    
T  1912558 tgttcaaatttc 1912569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 33532473 - 33532590
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggcta 288  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||||| ||| |   |||||| ||||||||||||||||    ||||||||||| ||||    
T  33532473 tatagcgcaactatagctgctgtttgacaacattctgtactaaatagcgtatagtgtaacaatggcgatttgttcaaattctgttacgctatagt-gcta 33532571  T
Q  289 taacgccgctatttaacaa 307  Q
    || ||||||||| ||||||    
T  33532572 tagcgccgctatctaacaa 33532590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 2457273 - 2457180
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 307  Q
    ||||||||||||||||||||||||||||||| |||||||||||   ||| |||||||| |||||| ||||| | ||||||  |||||||||||||||    
T  2457273 tttgacaacattttgtactaaatagcatatcacaaaacaatagtcgttttttcaaattccactacactatact-gctata--gccgctatttaacaa 2457180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 28640576 - 28640488
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctat 289  Q
    ||||| ||||||||||| |||||||||| ||| ||| ||| ||| ||||||| |||| |||||||||||||||| ||||||| ||||||    
T  28640576 atagccgctatttgacagcattttgtacgaaacagcgtattgcagaacaatatcgatctgttcaaatttcactatgctatagcggctat 28640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 11602521 - 11602611
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    ||||||||  ||| |||| ||||||||||||| ||| |||||||| |  | |  |||||||||||||||||||||||||||||||||||||    
T  11602521 tatagcgcagctaaagcttctatttgacaacactttatactaaattgtttgttacaaaacaatagcgatttgttcaaatttcactacgcta 11602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 7939975 - 7939859
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||||||| | | |||  ||||| ||| ||||||| ||||||||||| || |||||||| |||||  |||| || |||||||| |||||  ||||||    
T  7939975 aattccgctatgctacagtgctatagagccactatagccgctatttgacatcactttgtactgaatagagtatctcagaacaatagtgatttaatcaaat 7939876  T
Q  268 ttcactacgctatagtg 284  Q
    |||| ||||||||||||    
T  7939875 ttcattacgctatagtg 7939859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 9163816 - 9163745
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    ||||||||||||||||||||||||||||| |||  |  |||||||| |||||||||||||||  ||||||||    
T  9163816 ctatttgacaacattttgtactaaatagcgtataacggaacaatagggatttgttcaaatttttctacgcta 9163745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 26373143 - 26373077
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||||||||||| ||||||||||||||| |||| || |||||||| || |||||||| ||||||||    
T  26373143 ctatttgacaacactttgtactaaatagcgtatcacagaacaatagtgagttgttcaattttcacta 26373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 9074105 - 9074182
Alignment:
Q  176 tatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    ||||||| |||  ||||||||| |||||||  |||||||| ||||||||||| |||||||  ||||||||||||||||    
T  9074105 tatacaacagtgctatagcgccgctatagcctctatttgataacattttgtagtaaatagtgtatcgcaaaacaatag 9074182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 9194433 - 9194493
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||| ||||    
T  9194433 ctatttgacaacattttgtactaaataccgtatagcagaacaatagcaatttgttccaatt 9194493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 33282793 - 33282734
Alignment:
Q  172 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 231  Q
    |||||| |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||    
T  33282793 ccgctacacaatagttttatagcgccactatagatgctatttcacaacattttgcactaa 33282734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 653409 - 653351
Alignment:
Q  206 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    ||||||||||||||| ||||| |||||||||||||| || | ||||| |||||||||||    
T  653409 tgctatttgacaacagtttgtgctaaatagcatatcacatatcaataccgatttgttca 653351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 770421 - 770343
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||||| ||  ||| |||||||||||||  ||||||||||||||| |||| |  ||||||| ||||||||||||||    
T  770421 tatagcgccactgcagccgctatttgacaaccctttgtactaaatagcgtatcacggaacaataccgatttgttcaaat 770343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 2231090 - 2231128
Alignment:
Q  206 tgctatttgacaacattttgtactaaatagcatatcgca 244  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  2231090 tgctattggacaacattttgtactaaatagcatatcgca 2231128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 14933211 - 14933137
Alignment:
Q  180 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 254  Q
    ||||||| |||||||||| ||||| | ||||| |||||||| ||||||||||| ||  ||||||| |||||||||    
T  14933211 caatagtgttatagcgccactatatccgctatctgacaacaatttgtactaaagagtgtatcgcagaacaatagc 14933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 21869926 - 21869848
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 283  Q
    |||||||||||||||||||||||||||||||  |||| |  |||||||  ||||||||| ||||   ||||||||||||    
T  21869926 ctgctatttgacaacattttgtactaaatagtgtatcacggaacaataatgatttgttcgaattctgctacgctatagt 21869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 29243074 - 29243164
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    ||||||||| ||||||| || ||||||| | ||||| || |||||||  |||| || |||||||| || ||||||||||| ||||||||||    
T  29243074 tatagcgccactatagccgcaatttgactagattttatattaaatagtgtatcccagaacaatagagaattgttcaaattccactacgcta 29243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 33735435 - 33735469
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatc 241  Q
    |||||||||||||||||||||||||||||||||||    
T  33735435 gctatttgacaacattttgtactaaatagcatatc 33735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 1906845 - 1906930
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||| |||||||||||| |||| |||||||||||||   | | ||| |||||||| |||||||||||||| |||| | ||||||||    
T  1906845 ctatcgctgctatttgataacaatttgtactaaatattttgttgcagaacaatagtgatttgttcaaattccactgcactatagtg 1906930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 2766945 - 2766868
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    ||||| || ||||| ||| ||||||||||| ||||| ||||||||| | |||| || |||||||| ||||||||||||    
T  2766945 tatagtgcttctatggctactatttgacaatattttatactaaataacgtatcacataacaatagagatttgttcaaa 2766868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 4886257 - 4886204
Alignment:
Q  221 ttttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||| |||||||||||||||||  |||||||| |||||||||||||| |||||    
T  4886257 ttttgcactaaatagcatatcgcggaacaatagagatttgttcaaattccacta 4886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 8432090 - 8432017
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 280  Q
    ||||||||||| || |||||||||| |||||| | ||  || |||||||||||||||||||||  |||||||||    
T  8432090 gctatttgacagcactttgtactaattagcatcttgctgaataatagcgatttgttcaaattttgctacgctat 8432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 264615 - 264555
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||| ||||||||||||||| || | || ||||||| | |||||||||||||    
T  264615 ctatttgacaacactttgtactaaatagcctaccacagaacaataacaatttgttcaaatt 264555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 6012320 - 6012248
Alignment:
Q  194 cgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||| ||| |||||||||||||||||| |||| |||||||||  |||| || | |||||||||| ||||||||    
T  6012320 cgccgctaaagctgctatttgacaacagtttgaactaaatagagtatcacagagcaatagcgatgtgttcaaa 6012248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 14933023 - 14933079
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 261  Q
    ||||||| |||||||||||||||||||||||  ||| ||| |||||||||| |||||    
T  14933023 ctgctatctgacaacattttgtactaaatagtgtattgcagaacaatagcggtttgt 14933079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 33996332 - 33996416
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 285  Q
    ||||| |||||| |||||||||||||| |||| |||  || ||  |||||||||| |||||||||||| | ||||||| ||||||    
T  33996332 atagcagctattagacaacattttgtagtaaaaagcggattgcggaacaatagcggtttgttcaaattccgctacgctttagtgg 33996416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 739751 - 739704
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    ||||| ||| |||||||||||||||||||| ||||||||||| |||||    
T  739751 tatagtgccactatagctgctatttgacaatattttgtactatatagc 739704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 5730189 - 5730252
Alignment:
Q  203 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||| ||||||||||| ||||||||||||||||||||||    ||||| |||||||| ||||||    
T  5730189 agctactatttgacaagattttgtactaaatagcatatcatggaacaagagcgatttattcaaa 5730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 19391023 - 19390976
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    ||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  19391023 tatagcgccactataactgctatttgacaatactttgtactaaatagc 19390976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 30532117 - 30532188
Alignment:
Q  147 cagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaa 218  Q
    ||||| ||||| ||||||| ||||||| ||| || | |||| ||||||||||||||| | ||||||||||||    
T  30532117 cagaaaatagtggtttgttcgaattcctctacactacagtactatagcgcctctataaccgctatttgacaa 30532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 33260497 - 33260438
Alignment:
Q  172 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 231  Q
    |||||| |||||||| ||||||| || |||||| |||||||| ||||||||||| |||||    
T  33260497 ccgctacacaatagttttatagcaccactatagatgctatttcacaacattttgcactaa 33260438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 33851279 - 33851330
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 252  Q
    ||||| |||||||| ||||||||| |||||||||||||||  ||||||||||    
T  33851279 atagcagctatttggcaacattttatactaaatagcatatgacaaaacaata 33851330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 3737038 - 3736992
Alignment:
Q  222 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||| |||||||||||||| ||||||| | |||||||||||||    
T  3737038 tttgtactgaatagcatatcgcagaacaataacaatttgttcaaatt 3736992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 26494466 - 26494408
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||| |||||||||||||||  || ||| ||||||||| ||| |||||||||    
T  26494466 atttgacaacagtttgtactaaatagcgaattgcagaacaatagcaattagttcaaatt 26494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 31322702 - 31322632
Alignment:
Q  212 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||||||  ||||||  |||| || || |||| | ||||||||||||| |||||||||||||    
T  31322702 ttgacaacattttgtaagaaatagtgtatcacagaataataacaatttgttcaaattccactacgctatag 31322632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 31694723 - 31694797
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||| |||||||||||||||||||  |||| || |||||||||  |||||  ||||| |||||||| ||||    
T  31694723 ctatttgaaaacattttgtactaaatagtgtatcacagaacaatagcagtttgtctaaattccactacgccatag 31694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 33386254 - 33386192
Alignment:
Q  172 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 234  Q
    |||||| |||||||| |||||||||| ||||||  ||||||| ||||||||||| || |||||    
T  33386254 ccgctacacaatagttttatagcgccactatagaggctatttcacaacattttgaaccaaata 33386192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 2496447 - 2496383
Alignment:
Q  246 aacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 311  Q
    ||||| ||||||||||||||||| ||||| || ||||| |||  ||||||||||||| ||||||||    
T  2496447 aacaacagcgatttgttcaaattccactaagccatagt-gctgcaacgccgctatttgacaatatt 2496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 4354338 - 4354371
Alignment:
Q  202 tagctgctatttgacaacattttgtactaaatag 235  Q
    |||||||||||| |||||||||||||||||||||    
T  4354338 tagctgctattttacaacattttgtactaaatag 4354371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 9075271 - 9075206
Alignment:
Q  169 attccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 234  Q
    |||||| ||||||| |||  ||||||||| ||||| |  |||||||||||||||||||||| ||||    
T  9075271 attccgttatacaacagtgctatagcgccgctataacctctatttgacaacattttgtacttaata 9075206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 29404955 - 29405008
Alignment:
Q  217 aacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    |||| ||||||||||||| |||||||  |||||||||| |||| ||||||||||    
T  29404955 aacactttgtactaaataacatatcgtgaaacaatagcaattttttcaaatttc 29405008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 32392369 - 32392406
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagc 236  Q
    |||||||||||||||||||| | |||||||||||||||    
T  32392369 ctatagctgctatttgacaatactttgtactaaatagc 32392406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 24769369 - 24769309
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||| | ||||||||||||||  ||| ||| |||||||  ||||||||||||||    
T  24769369 ctatttgacaatactttgtactaaatagtgtattgcagaacaataatgatttgttcaaatt 24769309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 15606321 - 15606404
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| | |||||||    
T  15606321 ctatagctgttatttgacaacattttgtactaaatagcatatagcagaacaatagtgatttgtttaaatttcacaatgctatag 15606404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 7347777 - 7347693
Alignment:
Q  184 agtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||  ||| ||||||||||||| |||||||||||||    
T  7347777 agtactatagcgcctctatagccgctatttcacaatattttgtactaaatagtgtattgcaaaacaatagcaatttgttcaaatt 7347693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 6025952 - 6026031
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||  |||||||  ||||||||||||||||||||||||||||||||||||  ||||||| | |||||||||||||    
T  6025952 tatagcgctgctatagccactatttgacaacattttgtactaaatagcatatcgcggaacaataactatttgttcaaatt 6026031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 17473206 - 17473136
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||||||||  |||||| |||||||    
T  17473206 tatagcggctatttgacaatattttgtactaaatagcatattgcaaaacaatagcattttgtttaaatttc 17473136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 52517064 - 52517141
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||||||||||| ||||||||||||||| |||||| ||||| |||||| ||| ||||||||| |||||| ||||||||    
T  52517064 gctatttgacaatattttgtactaaataacatatcacaaaataatagcaattagttcaaattccactactctatagtg 52517141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 30882515 - 30882449
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  30882515 gctatttgacgtcattttgtactaa-tagcatatcgcaaaacaatagtgatttgttcaaattccacta 30882449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 44417857 - 44417783
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||| |||| |||||||| |||||| |||||||||| || ||||||||||||  ||||||||||||    
T  44417857 ctatttgacaacactttgcactaaataacatatcccaaaacaataacggtttgttcaaattctactacgctatag 44417783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 43391470 - 43391595
Alignment:
Q  143 atcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcg 242  Q
    |||||| || |||| ||||||||||| ||| ||||| ||| |||  ||||||    ||||||| || ||||||||||||||||||||||||||   ||||    
T  43391470 atcgcaaaaaatagcagtttgtttgagttctgctatgcaacagtgctatagcaatgctatagccgccatttgacaacattttgtactaaatagtgcatcg 43391569  T
Q  243 caaaacaatagcgatttgttcaaatt 268  Q
       |||||||||||||||||||||||    
T  43391570 gggaacaatagcgatttgttcaaatt 43391595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 47847982 - 47848050
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||   |||||||||||||||||||||||    
T  47847982 ctatagccgctatttgacaacattttgtac-aaatggcatatcgtggaacaatagcgatttgttcaaatt 47848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 3240548 - 3240482
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 265  Q
    |||||||  ||||||||||||||| | || |||||||| |||||||||||||||| |||||||||||    
T  3240548 ctatagcctctatttgacaacattgtttaataaatagcgtatcgcaaaacaatagtgatttgttcaa 3240482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 15794165 - 15794004
Alignment:
Q  145 cgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 244  Q
    ||||||| |||||  |||||||||||||| ||| ||||||||  |||||||||  ||||||  | | | |||| |||||||||||||||||| |||| ||    
T  15794165 cgcagaaaatagtgatttgtttgaattccactacacaatagtgctatagcgccgttatagcaccgact-gacagcattttgtactaaatagcgtatctca 15794067  T
Q  245 aaacaatagcgatttgttcaaatttcactacgctatagtg--gctataacgccgctatttaacaa 307  Q
     ||||| |  ||| |||||||||| |||| |||||||| |  ||||||  |||||||||||||||    
T  15794066 gaacaaaaatgatctgttcaaattccactgcgctatagcgctgctata--gccgctatttaacaa 15794004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 15955961 - 15955893
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||| ||||||||||||||||||||| ||||||||  |||| || ||||| | |||||||||||||||    
T  15955961 tatagatgctatttgacaacattttgtcctaaatagtgtatcacataacaagaacgatttgttcaaatt 15955893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 32868328 - 32868272
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    ||||||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||    
T  32868328 atttgacaacaatttgcactaaatagtatattgcagaacaatagcgatttgttcaaa 32868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 33651715 - 33651660
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 263  Q
    ||||||||||||||||| ||||||||||||||| | | ||||||| ||||||||||    
T  33651715 ctatttgacaacattttatactaaatagcatattgtagaacaataacgatttgttc 33651660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 15592675 - 15592737
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 261  Q
    ||||||| ||||||||||||||||||  || ||||||||||| ||||||||| || |||||||    
T  15592675 ctatagccgctatttgacaacattttacaccaaatagcatattgcaaaacaagagtgatttgt 15592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 26161587 - 26161637
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcata 239  Q
    ||||||||  |||||||||||||||||||| | ||||||||||||||||||    
T  26161587 tatagcgcggctatagctgctatttgacaatactttgtactaaatagcata 26161637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 3950742 - 3950673
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| ||||||| |||  |||| |||||||||||| ||||||  |||||||| ||||||||||||||    
T  3950742 ctatagcagctatttcacattatttggtactaaatagcgtatcgcggaacaatagtgatttgttcaaatt 3950673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 7991597 - 7991516
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||| || |||||||||||| |||| ||| |||||||||| || |||| |  |||||||| | ||||||||||||||    
T  7991597 tatagcgccactctagctgctatttcacaatattatgtactaaatggcgtatcacggaacaatagtggtttgttcaaatttc 7991516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 15923758 - 15923827
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||| | |||||| || |||| ||||||  |||| |||||||||||||||| |||||||||    
T  15923758 ctatagctgctatctaacaacacttcgtacaaaatagtgtatcacaaaacaatagcgattagttcaaatt 15923827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 26360296 - 26360401
Alignment:
Q  180 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    |||||||| |||| |||| ||||||  ||||||||| | ||||||||||||||||| ||| ||   |||||| ||| ||||| |||||| ||| ||| ||    
T  26360296 caatagtactatatcgccactatagtcgctatttgatagcattttgtactaaatagtataccggggaacaattgcggtttgtccaaattccaccacgtta 26360395  T
Q  280 tagtgg 285  Q
    ||||||    
T  26360396 tagtgg 26360401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 32721482 - 32721421
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||||||||||||    ||||||||||||| | |||||||| ||||    
T  32721482 gctatttgacaacattttgtactaaatagtgcttcgcaaaacaataacaatttgttcgaatt 32721421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 11766188 - 11766237
Alignment:
Q  217 aacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  11766188 aacactttgtactaaatagcatatc--aaaacaatagctatttgttcaaatt 11766237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 12764101 - 12764017
Alignment:
Q  184 agtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| ||||||||| ||||||| ||||||||  |||| || ||| |||||||||||| ||| ||||||||  ||||||| |||||    
T  12764101 agtactatagcgccactatagccgctatttggaaacacttcgtattaaatagcatattgcagaacaatagtaatttgttaaaatt 12764017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 28067557 - 28067473
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||||| ||| ||||| ||||| ||| ||||| ||||||||||||||| || |||||  ||||||| | ||| |||||||||    
T  28067557 tatagctgcaattcgacaatattttataccaaataacatatcgcaaaacaacagtgatttcatcaaattcccctatgctatagtg 28067473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 400972 - 400901
Alignment:
Q  191 tagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 262  Q
    ||||||| ||||| || ||||||||||| | |||||||||||| | |||||||| |||||| | ||||||||    
T  400972 tagcgccactataacttctatttgacaatactttgtactaaattgtatatcgcagaacaatggtgatttgtt 400901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 11049122 - 11049047
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||||||||||||||| || ||||||||||| ||||  |||||   | || |||||||||||||||||| |||||    
T  11049122 ctatagctgctatttgataagattttgtactagatagtgtatcgtggagcagtagcgatttgttcaaattccacta 11049047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 46331109 - 46331156
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 254  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||    
T  46331109 gctatttgacaccattttgtacttaatagcatatcataaaacaatagc 46331156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 3335211 - 3335145
Alignment:
Q  202 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||||| ||| ||||||| ||  | ||||  |||||||| ||||||||||||||    
T  3335211 tagctgctatttgacaacactttatactaaacagggtgtcgcggaacaatagtgatttgttcaaatt 3335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 4541638 - 4541583
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 265  Q
    ||||||||||||| |  |||| ||||||||||| ||||||||||| ||||||||||||    
T  4541638 ctatttgacaacact--gtaccaaatagcatattgcaaaacaataacgatttgttcaa 4541583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 15190929 - 15190855
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 281  Q
    ||||||||||||||||||||||| |||||  ||||| | ||||||||| |||| || ||||| | ||| ||||||    
T  15190929 gctatttgacaacattttgtactgaatagtgtatcgtagaacaatagcaatttctttaaattccgctaggctata 15190855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 15364936 - 15365009
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 265  Q
    ||||| |||| |||||| ||||||| |||||| |||||||||| ||   |||| |||||||||||| ||||||||||    
T  15364936 tatagtgcctgtatagccgctatttaacaacactttgtactaagta---tatcacaaaacaatagcaatttgttcaa 15365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 19392262 - 19392212
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 255  Q
    |||||||||||||| |||||||||| ||||| ||||||  |||||||||||    
T  19392262 ctgctatttgacaatattttgtacttaatagtatatcgtgaaacaatagcg 19392212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 50322108 - 50322030
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    |||||||| ||||||||| ||||| |||||||| |  ||||| | |||||||| | |||||||||||| ||||| ||||    
T  50322108 atagctgcaatttgacaatattttatactaaattgtgtatcgtagaacaatagtggtttgttcaaattccactatgcta 50322030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 14643201 - 14643262
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||| ||||| || ||||||||||| ||||||  |||||| || |||||||||||||    
T  14643201 gctatttgaaaacatcttctactaaatagcgtatcgctgaacaatggcaatttgttcaaatt 14643262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 15956935 - 15956878
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||| ||||||||||||||| ||| ||  ||||||| | |||||||||||||    
T  15956935 tttgacaacactttgtactaaatagcgtatggcggaacaataacaatttgttcaaatt 15956878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 1880082 - 1880137
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 263  Q
    ||||||||||||||||||||||| |||||  |||| || ||||||||| ||||||||    
T  1880082 gctatttgacaacattttgtact-aatagagtatcacataacaatagcaatttgttc 1880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 46937630 - 46937570
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||| |||||||||||||||||  |||||  |||||||||  ||||||||||||    
T  46937630 ctatttcacaatattttgtactaaatagcgcatcgcggaacaatagcactttgttcaaatt 46937570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 48432631 - 48432703
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 283  Q
    |||||||||||| ||||||||||||| |||  ||||||||||| | | ||| ||||||   ||||||||||||    
T  48432631 tttgacaacattgtgtactaaatagcgtattacaaaacaatagtggtgtgtccaaattctgctacgctatagt 48432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 7245942 - 7246026
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| ||| ||| |||||||    
T  7245942 tatagccgctatttgacaacactttgtactaaatagcgtatcgcaaaagaatagcgatttgtttaaattccaccacggtatagtg 7246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 6894305 - 6894386
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||| ||||||||||||||||||||| |||||  ||| |  |||||||||| ||||||||||||| |||||||||||||    
T  6894305 atagctgttatttgacaacattttgtacttaatagtgtattgttaaacaatagcaatttgttcaaattccactacgctatag 6894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 1110401 - 1110471
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||| ||||||||||||||| || | ||||||||||||||| | |||||||||| |||||||||||||||    
T  1110401 tatagttgctatttgacaacacttagaactaaatagcatatcccgaaacaatagcaatttgttcaaatttc 1110471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 38774312 - 38774381
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||  |||||||| ||||||||||||||    
T  38774312 ctatagccgctatttgacaacatgatgtactaaatagcataacgctgaacaatagtgatttgttcaaatt 38774381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 24942574 - 24942499
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||    |||||||||||| ||||||    
T  24942574 tatagcgccgctacagctgctatttgacaacattttgtactaattagcgtatcatggaacaatagcgatctgttca 24942499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 2219525 - 2219599
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 281  Q
    |||||||||||| ||||||||||||||||||||||  | ||||||| |||| ||||||||||  ||||| |||||    
T  2219525 gctatttgacaatattttgtactaaatagcatatcagagaacaataacgatatgttcaaattctactacactata 2219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 268
Target Start/End: Original strand, 30900051 - 30900173
Alignment:
Q  146 gcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaa 245  Q
    |||||| ||||| ||||| |  |||||||||||  || |||| |||||| || | |||||  |||||| |||| ||||||||||||||||  ||||||      
T  30900051 gcagaaaatagtggtttgctcaaattccgctatgtaacagtactatagcaccgcgatagccactatttcacaatattttgtactaaatagtgtatcgctg 30900150  T
Q  246 aacaatagcgatttgttcaaatt 268  Q
    ||||||||||||| |||||||||    
T  30900151 aacaatagcgattcgttcaaatt 30900173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 39417816 - 39417762
Alignment:
Q  214 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  39417816 gacaacattttgtactatatagcatatcgcggaacaatagtgatttgttcaaatt 39417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 23747392 - 23747323
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||  |||| ||||||| |||||||||| ||||||||| || ||||||||| |||||||||||||    
T  23747392 ctatagctattattcgacaacagtttgtactaactagcatatcacagaacaatagctatttgttcaaatt 23747323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 38921362 - 38921262
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    |||||||||| |||| | |  ||||||||| || ||||| ||| || |||| |||||| ||||||||| |||||||| ||||| || |||||||||||||    
T  38921362 aattccgctacacaacaatgctatagcgccactgtagctactacttcacaatattttgcactaaatagtatatcgcagaacaacagtgatttgttcaaat 38921263  T
Q  268 t 268  Q
    |    
T  38921262 t 38921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 1109354 - 1109412
Alignment:
Q  212 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||||||||||||||||||  ||||||  |||||| | ||||||||||||||||    
T  1109354 ttgacaacattttgtactaaatagtgtatcgcggaacaatggggatttgttcaaatttc 1109412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 13380968 - 13380906
Alignment:
Q  206 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| ||||||||||||||||||||||||||  || ||| |||| |||| |||||||||||||    
T  13380968 tgctgtttgacaacattttgtactaaatagcggatagcagaacagtagcaatttgttcaaatt 13380906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 21451517 - 21451571
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 254  Q
    |||||| |||||||||||| |||||||||||||| || ||||||| |||||||||    
T  21451517 tatagccgctatttgacaagattttgtactaaattgcgtatcgcagaacaatagc 21451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 23218571 - 23218681
Alignment:
Q  158 agtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgat 257  Q
    ||||||||| ||||||| ||| ||  |||  |||||||||  ||||  |||||||||||||||||||||| |||||||| ||||  | ||||||  ||||    
T  23218571 agtttgtttaaattccgttatgcagcagtgctatagcgccattatatttgctatttgacaacattttgtattaaatagcgtatcatagaacaatgacgat 23218670  T
Q  258 ttgttcaaatt 268  Q
    |||| ||||||    
T  23218671 ttgtccaaatt 23218681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 400623 - 400676
Alignment:
Q  229 taaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||||||| ||| | ||||||||||||||||||||| ||||||| |||||    
T  400623 taaatagcatattgcatagcaatagcgatttgttcaaattccactacgatatag 400676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 5260459 - 5260422
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagc 236  Q
    |||||||||||||||||||| |||||||||||||||||    
T  5260459 ctatagctgctatttgacaatattttgtactaaatagc 5260422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 21450959 - 21451016
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||| | |||||||||||||||||||  || |||||||| ||||||||||||||    
T  21450959 tttgacaatagtttgtactaaatagcatattccagaacaatagtgatttgttcaaatt 21451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 8095955 - 8095907
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    |||||||| ||||||||||||||||||||||  |||||||| |||||||    
T  8095955 ctgctattcgacaacattttgtactaaatagtgtatcgcaacacaatag 8095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 23117360 - 23117420
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||||||||||| ||||||||||||||    || ||||||||||||||||||||    
T  23117360 ctatttcacaacattttgtgctaaatagcatatcatggaaaaatagcgatttgttcaaatt 23117420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 44124610 - 44124546
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    ||||||||| ||||| | |||||||||||| ||| ||||||||||||  ||||||| ||||||||    
T  44124610 tatagcgccgctatatcagctatttgacaatattctgtactaaatagtgtatcgcagaacaatag 44124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 1662624 - 1662703
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||| ||||||||||   | |||||||||||||||  ||||||||||  |||||| |||||||  ||||||||||||||    
T  1662624 tatagtgcctctatagtcaccatttgacaacatttttcactaaatagcgcatcgcagaacaataatgatttgttcaaatt 1662703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 10455141 - 10455094
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    ||||||||| ||||||| || ||||||||| |||||||||||||||||    
T  10455141 tatagcgccactatagccgcaatttgacaaaattttgtactaaatagc 10455094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 24673364 - 24673451
Alignment:
Q  147 cagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaata 234  Q
    ||||| ||||| |||||||  ||||| ||||| ||| |||  ||| | ||| ||||||| ||||||||||||||||||||||| ||||    
T  24673364 cagaaaatagtggtttgttcaaattcagctatgcaacagtgatatggtgccgctatagcggctatttgacaacattttgtactgaata 24673451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 33007893 - 33007955
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||||||||||||||||||| || |||||| ||||||  || ||||||| |||||||||||    
T  33007893 gctgctatttgacaacattttgtgct-aatagcttatcgcggaataatagcggtttgttcaaat 33007955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 37233781 - 37233722
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    ||||||||||||||||||||||||||||| |||||   ||||||| | || |||||||||    
T  37233781 gctatttgacaacattttgtactaaataggatatcctgaaacaattgtgaattgttcaaa 37233722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 38622871 - 38622954
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||    ||||||| |||||| ||||||||   |||||||||||    
T  38622871 ctatagccgctatttgacaacattttgtgctaaatagtgtatcatggaacaatatcgatttattcaaattctgctacgctatag 38622954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 7982345 - 7982415
Alignment:
Q  212 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| |||| | | |||||  |||| |||||||||||| ||||||||||||| ||||| |||||||    
T  7982345 ttgacaacaatttgcagtgaatagtgtatcacaaaacaatagcaatttgttcaaattccactatgctatag 7982415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 21343694 - 21343752
Alignment:
Q  224 tgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||  ||||||||||||| || |||||||||| ||| | |||||||||||    
T  21343694 tgtactaaatagtgtatcgcaaaacaacagtgatttgttcatattcctctacgctatag 21343752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 25268875 - 25268805
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 281  Q
    |||||||| ||||| ||||||||||  ||| ||| ||||||| |||||||||||||||   ||||||||||    
T  25268875 tttgacaatattttatactaaatagtgtatagcagaacaataacgatttgttcaaattctgctacgctata 25268805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 30885321 - 30885363
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaa 250  Q
    |||||||||||  |||||||||||||||||||||||| |||||    
T  30885321 ctatttgacaatgttttgtactaaatagcatatcgcagaacaa 30885363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 33581808 - 33581726
Alignment:
Q  188 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||| || |||| || ||||||||||||||| |||||  ||||||| |||| |  |||||| | ||||||||||||||||    
T  33581808 ttatagcaccactatggccgctatttgacaacatattgtatcaaatagcgtatcccgtaacaatggtgatttgttcaaatttc 33581726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 40869547 - 40869581
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaata 234  Q
    |||||| ||||||||||||||||||||||||||||    
T  40869547 tatagccgctatttgacaacattttgtactaaata 40869581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 30408257 - 30408321
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 275  Q
    |||||| ||||||||||||||| ||| ||||| | |||||||||| | ||||||||||||| ||||    
T  30408257 atttgaaaacattttgtactaattagaatatcac-aaacaatagccacttgttcaaatttcgctac 30408321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 31838929 - 31838837
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||| || ||| ||||||||||  |||||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| | ||||| |||||||    
T  31838929 tatagcaccactagagctgctattgaacaacaatttgtactaaata-catattgcagaacaatagaaatttgttaaaactccactatgctatag 31838837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 32231823 - 32231762
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| |||| ||||||| ||||||| |||||| || |||| ||| ||||||||||||||    
T  32231823 gctatttcacaatattttgtgctaaataacatatcacagaacactagagatttgttcaaatt 32231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 32889016 - 32888963
Alignment:
Q  188 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatc 241  Q
    |||||||||| | |||||  ||||||||||| | ||||||||||||||||||||    
T  32889016 ttatagcgccgcaatagccactatttgacaatactttgtactaaatagcatatc 32888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 34925312 - 34925345
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaa 232  Q
    ||||||| ||||||||||||||||||||||||||    
T  34925312 ctatagccgctatttgacaacattttgtactaaa 34925345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 25314032 - 25314104
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctata 281  Q
    ||||| |||||| ||||||| ||||||  |||| || ||||||| ||||||||||||||| | ||| ||||||    
T  25314032 tatttaacaacactttgtaccaaatagtgtatcacagaacaataacgatttgttcaaattcctctatgctata 25314104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 11257789 - 11257714
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| | |||| ||||||    
T  11257789 gctatttgacaacattttgtactaaatagcatatcgtataacaatagcgatttgttcatattccgctacactatag 11257714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 21047059 - 21047136
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacg 276  Q
    ||||||| | |||||||||||||||| |||||||||||||||| |  |||||||| |||||  |||||||||||||||    
T  21047059 ctatagccgttatttgacaacattttttactaaatagcatatcacggaacaatagtgattttatcaaatttcactacg 21047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 39647139 - 39647188
Alignment:
Q  219 cattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39647139 cattttgtactaaatagcatatcgcagaacaataacgatttgttcaaatt 39647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 7430218 - 7430118
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    |||||||||| ||| |||| |||||||||  | ||||| ||||||||||||||| |||||||||||||| ||| |   |||||||||| ||||| |||||    
T  7430218 aattccgctacacagtagtgttatagcgctacaatagccgctatttgacaacatcttgtactaaatagcgtattgtggaacaatagcggtttgtccaaat 7430119  T
Q  268 t 268  Q
    |    
T  7430118 t 7430118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 27731590 - 27731654
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||| | |||||||||||||||||||||  ||||||||||| |||||| |||||    
T  27731590 gctgctatttgacaaaactttgtactaaatagcatatcggtaaacaatagcggtttgtttaaatt 27731654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 39159727 - 39159810
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||||||||||| ||||  |||||||||||| ||||||| || |||||||| | |||||| ||||| | |||||||||||    
T  39159727 ctatagctgctatttgtcaacgctttgtactaaattgcatatcacagaacaatagtggtttgttaaaattccgctacgctatag 39159810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 16973824 - 16973905
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 280  Q
    |||||||||||||||||||| ||||||||||||| | | ||||||  |||||||| ||||||||  |||| | |||||||||    
T  16973824 ctatagctgctatttgacaaaattttgtactaaacaacgtatcgcggaacaatagtgatttgtttgaattcctctacgctat 16973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 34156783 - 34156643
Alignment:
Q  141 caatcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatat 240  Q
    ||||||||||||||||  |||||||  ||||| ||||| ||| |||  |||||| |   ||||| |||||||| ||||||||||| |||||||||| |||    
T  34156783 caatcgcagaagatagctgtttgttcaaattctgctatgcaacagtgctatagcacaaatatagttgctatttaacaacattttgcactaaatagcgtat 34156684  T
Q  241 cgcaaaacaatagcgatttgttcaaatttcactacgctata 281  Q
    | |  | ||| ||||||| |||||||||   ||||||||||    
T  34156683 cacggagcaaaagcgattagttcaaattctgctacgctata 34156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 41894481 - 41894417
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||| |||||| |||||||| ||| ||| ||||||| | |||||||||||||    
T  41894481 gctgctatttgacaacactttgtagtaaatagcgtattgcagaacaataacaatttgttcaaatt 41894417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 40677960 - 40678061
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgcta 299  Q
    |||||| ||||||||||||| |||||||||||| |||| |||||| ||||||  |  |||||||||||| | ||| | |||| | |||||| ||||||||    
T  40677960 tatagccgctatttgacaactttttgtactaaacagcacatcgcagaacaattccagtttgttcaaattccgctaagttataat-gctatagcgccgcta 40678058  T
Q  300 ttt 302  Q
    |||    
T  40678059 ttt 40678061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 41015003 - 41015065
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||| |||||||| |||||||||||||||||||| |  |||||||||  |||||||||||||    
T  41015003 gctatatgacaacactttgtactaaatagcatatcacggaacaatagcagtttgttcaaattt 41015065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 6202658 - 6202589
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| |||||||||| |||   ||||||||||||||||||||| || | ||||||||||||||| |||||    
T  6202658 ctatggctgctatttcacattgttttgtactaaatagcatatcacatagcaatagcgatttgttaaaatt 6202589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 6586627 - 6586482
Alignment:
Q  159 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatt 258  Q
    |||||||  |||||| |||| |||||||  ||||||| | ||||| | ||| |||||||| |||||| |||||||| ||||| |    ||||||||||||    
T  6586627 gtttgttcaaattcctctatgcaatagttctatagcggcactataaccgctgtttgacaatattttgcactaaataccatattgtgggacaatagcgatt 6586528  T
Q  259 tgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 307  Q
    |||| ||  | ||||| |||||||| ||||||  |||||||||||||||    
T  6586527 tgttgaatatccactatgctatagt-gctata--gccgctatttaacaa 6586482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 33342789 - 33342728
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||| | |||||||| |||||  ||||||| |||||||||||||| ||||||||    
T  33342789 gctatttgacaatactttgtacttaatagtgtatcgcataacaatagcgatttattcaaatt 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 41991254 - 41991173
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||  |||||| |||||||||||| || ||| ||| || |||| ||||||||| ||||| ||||| |||||||    
T  41991254 atagctgctattaaacaacactttgtactaaattgcgtatagcagaataatatcgatttgtttaaattccactatgctatag 41991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 43283418 - 43283491
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||||||||||||||| | ||||||| ||| ||  ||||| ||||||||||||||||| | ||| |||||||||    
T  43283418 tttgacaacattttgtcccaaatagcgtattgcggaacaacagcgatttgttcaaattacgctatgctatagtg 43283491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 9446400 - 9446286
Alignment:
Q  143 atcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctc---tatagctgctatttgacaacattttgtactaaatagcata 239  Q
    ||||||||| |||| |||||| |  |||||||||| |||| |||  |||||| || |   |||||| ||||||| | || ||||||||||||||||||||    
T  9446400 atcgcagaaaatagcagtttgctcaaattccgctacacaacagtgctatagcaccaccactatagccgctatttcataatattttgtactaaatagcata 9446301  T
Q  240 tcgcaaaacaatagc 254  Q
    | ||| |||||||||    
T  9446300 ttgcataacaatagc 9446286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 31029638 - 31029562
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 283  Q
    |||||||||||||| ||||||| || ||  |||||||| ||||| || |||||| ||||||||| ||| ||||||||    
T  31029638 gctatttgacaacactttgtacaaagtaatatatcgcagaacaacagtgatttgatcaaatttctctaagctatagt 31029562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 40991017 - 40990949
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacg 276  Q
    ||||||||||||||||||||||||||||| | || || || ||||||| |||||  ||||| |||||||    
T  40991017 ctatttgacaacattttgtactaaatagcgtgtcacagaagaatagcggtttgtctaaattccactacg 40990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 8977485 - 8977426
Alignment:
Q  245 aaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaa 307  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||||||  |||||||||||||||    
T  8977485 aaacactagtgatttgttcaaatttcgctacgctatagt-gctata--gccgctatttaacaa 8977426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 16033090 - 16033019
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||||||||||| |||| ||| ||  ||||| || |||||||||||||| |  ||||||||||    
T  16033090 tttgacaacattttgtactaagtagcgtattgcgtaacaaaagagatttgttcaaattccgatacgctatag 16033019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 29466250 - 29466168
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||| ||| |||||||||  |||||||||||||||||||||| |||||| || | ||| |||||||||| |||| | ||||||    
T  29466250 ctataactgttatttgacat-attttgtactaaatagcatatcacaaaacgatggtgatatgttcaaattccactccactatag 29466168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 17855260 - 17855226
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgc 243  Q
    |||||||||||||||||||||||| ||||||||||    
T  17855260 tatttgacaacattttgtactaaaaagcatatcgc 17855226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 18551479 - 18551549
Alignment:
Q  198 tctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||  ||||| |||||||| |||||||||||| ||||||| | ||||||||||  |||||| |||||    
T  18551479 tctatagacgctatatgacaacactttgtactaaattgcatatctcgaaacaatagctgtttgttaaaatt 18551549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 18839185 - 18839223
Alignment:
Q  246 aacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  18839185 aacaatagctatttgttcaaatatcactacgctatagtg 18839223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 19115099 - 19115160
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    |||||||||||| |||||||||||||| ||||| || |||||| ||| || ||||||||||||    
T  19115099 ctatttgacaacgttttgtactaaatatcatattgc-aaacaacagcaatctgttcaaatttc 19115160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 20981328 - 20981270
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||| ||||| ||||||||||| ||| ||| |||||||| |||| |||||||||    
T  20981328 atttgacaatattttatactaaatagcgtattgcagaacaatagtgattagttcaaatt 20981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 40213882 - 40213951
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||| | ||||||||||||||||||||| ||||| ||| ||  |||||||| ||||||||||| ||||    
T  40213882 tatagctaccatttgacaacattttgtactacatagcgtattgc-gaacaatagtgatttgttcaattttc 40213951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 41376333 - 41376402
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||||||||||| ||||  | ||||||||| ||||||||||||||||||| |  || |||||||||||    
T  41376333 ctatagctgctatttcacaatgtgttgtactaa-tagcatatcgcaaaacaatggacatatgttcaaattt 41376402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 1792110 - 1792139
Alignment:
Q  239 atcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||||||||||||||||    
T  1792110 atcgcaaaacaatagcgatttgttcaaatt 1792139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 7477556 - 7477621
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    |||||||||||| |||||||||||||| | |||||  |||||||| ||||| || ||||| |||||    
T  7477556 tatttgacaacactttgtactaaatagtaaatcgcggaacaatagtgatttattaaaattccacta 7477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 14956693 - 14956762
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||||||||||||||  | || |||||||| ||||| || || ||||| ||||||||||||||    
T  14956693 ctatagatgctatttgacaacacatagtgctaaatagaatatcacagaataatagtgatttgttcaaatt 14956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 38346923 - 38346862
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||||||| |||||||  |||| || |||||||| || || ||||||||    
T  38346923 gctatttgacaacattttgtagtaaatagtgtatcacagaacaatagtgactttttcaaatt 38346862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 39647243 - 39647296
Alignment:
Q  222 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 275  Q
    ||||| ||||| ||||||||||| ||||||| |||||| |||||||| ||||||    
T  39647243 tttgtgctaaacagcatatcgcagaacaataacgatttattcaaattccactac 39647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 631483 - 631527
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgc 243  Q
    ||||||| ||||| |||||| ||||||||||||||||| ||||||    
T  631483 ctatagccgctatatgacaatattttgtactaaatagcgtatcgc 631527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 4788021 - 4787945
Alignment:
Q  159 gtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatag 235  Q
    |||||||  ||||||| |||| || |||  ||||| |||| | ||||  ||||||||||||||||||||||||||||    
T  4788021 gtttgttcaaattccgatataaaacagtgctatagtgcctgtgtagccactatttgacaacattttgtactaaatag 4787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 13996378 - 13996410
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgc 243  Q
    |||||||||||||||||||||||||| ||||||    
T  13996378 tttgacaacattttgtactaaatagcgtatcgc 13996410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 34451993 - 34452045
Alignment:
Q  202 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 254  Q
    |||||| ||||| |||| | |||||||||||| ||||||||| ||||||||||    
T  34451993 tagctgatattttacaatactttgtactaaattgcatatcgctaaacaatagc 34452045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 37056430 - 37056370
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 265  Q
    ||||||||||||||||||| |||||||| ||| || | |  ||||||||| ||||||||||    
T  37056430 ctgctatttgacaacatttcgtactaaacagcgtaccacggaacaatagcaatttgttcaa 37056370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 235
Target Start/End: Original strand, 41399570 - 41399598
Alignment:
Q  207 gctatttgacaacattttgtactaaatag 235  Q
    |||||||||||||||||||||||||||||    
T  41399570 gctatttgacaacattttgtactaaatag 41399598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 27318081 - 27317996
Alignment:
Q  161 ttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaa 246  Q
    |||||| ||||||||||  |||||||  ||||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  27318081 ttgtttaaattccgctaggcaatagttatatagcgccactatagccgctatttgacagcattttttactaaatagcatatagcaaa 27317996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 33958297 - 33958230
Alignment:
Q  212 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  33958297 ttgacaacattttgtattcaatagcatattgcagaacaatagcgagttgttcaaattccactacgcta 33958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 26174994 - 26174925
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||||||||||||||||||| || ||||||||||  ||||||| ||||||||| ||||||||||||||    
T  26174994 ctatagctgctatttgacaacatattatactaaatagtgtatcgcagaacaatagc-atttgttcaaattt 26174925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 11530108 - 11530027
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||| ||| ||||||| ||||||| |||| ||| ||||||||||||  ||||||| |||||||| ||||||||||||||||    
T  11530108 tatagtgccactatagccgctatttcacaatattatgtactaaatagtgtatcgcagaacaatagtgatttgttcaaatttc 11530027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 41631885 - 41631944
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||| ||||||| || ||||||||||||||||| |||||||||||| ||||||||||||    
T  41631885 ctattcgacaacacttcgtactaaatagcatatcacaaaacaatagcaatttgttcaaat 41631944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 42616723 - 42616798
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||||||||   ||||||||||||||| | ||||||||    
T  42616723 tatagtgccactataactgctatttgacaacactttgtactaaatagtggatcgcaaaacaatagtggtttgttca 42616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 273
Target Start/End: Original strand, 17442941 - 17443035
Alignment:
Q  179 acaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 273  Q
    |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||||| | ||   |  ||||||||| ||||||||||||| ||||    
T  17442941 acaatagttttatagcgccactatagatgctatttcacaacattttgcactaaatatcgtaattctgaacaatagcaatttgttcaaattccact 17443035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 44458225 - 44458305
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||||||||||| | |||||||||||||   ||||||  |||||||||| ||||||| |||| ||||| |||||||||    
T  44458225 gctgctatttgacaatactttgtactaaatattgtatcgcggaacaatagcggtttgttcgaattccactatgctatagtg 44458305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 4204949 - 4205011
Alignment:
Q  205 ctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||| |||||||||||||||| |  |||||||||| ||| ||||||||    
T  4204949 ctgctatttgacaacatttt-tactaaatagcatatcacggaacaatagcggttttttcaaatt 4205011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 18569490 - 18569435
Alignment:
Q  197 ctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaata 252  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||| || |||||||    
T  18569490 ctctatagcggctatttgacaacactttatactaaatagcatatcacagaacaata 18569435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 31790447 - 31790554
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||| ||||| ||||| |  ||||||||| ||||| |  |||| |||||||||||| ||||||||||  ||| ||| |||||||||  ||||| |||||    
T  31790447 aattctgctatgcaatactgatatagcgccactatatccactatatgacaacattttatactaaatagtgtatggcagaacaatagctgtttgtccaaat 31790546  T
Q  268 ttcactac 275  Q
    ||||||||    
T  31790547 ttcactac 31790554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 39597639 - 39597568
Alignment:
Q  206 tgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgc 277  Q
    |||||||| |||| ||||||||||||||||| ||||||  |||||||||||||| || ||||| | ||||||    
T  39597639 tgctatttcacaatattttgtactaaatagcgtatcgcggaacaatagcgatttatttaaattccgctacgc 39597568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 20547095 - 20547165
Alignment:
Q  212 ttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||||||| ||||| ||||||| ||| |||||| ||||||| |||||||| ||| || ||||||    
T  20547095 ttgacaacattttgtgctaaagagcatattgcagaacaatggcgatttcttcaaattccacaaccctatag 20547165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 2045047 - 2045133
Alignment:
Q  180 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||| ||| ||| ||||||||||||||||| || ||||  ||||||||||  |||  |||||||||| |||| ||||||||||    
T  2045047 caatagtattttagagccactatagctgctatttgataatattt--tactaaatagtgtataacaaaacaataacgatgtgttcaaatt 2045133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 11328188 - 11328128
Alignment:
Q  211 tttgacaacattttgtactaa--atagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    |||||||||||||||||||||  ||||||||| || | ||||||||||| |||||||||||    
T  11328188 tttgacaacattttgtactaataatagcatattgcgagacaatagcgatatgttcaaattt 11328128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 28044715 - 28044760
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  28044715 ctatttgacaacactttgtactaaatcgcatatcacaaaacaatag 28044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 28804405 - 28804336
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| | |||||||||| | ||||||||||||||| |||    ||||||||||||||||||||||||    
T  28804405 ctatagccgttatttgacaatactttgtactaaatagcttattctgaaacaatagcgatttgttcaaatt 28804336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 32321542 - 32321501
Alignment:
Q  190 atagcgcctctatagctgctatttgacaacattttgtactaa 231  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  32321542 atagcggcgctatagctgctatttgacaacattttgtactaa 32321501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 33971706 - 33971657
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcga 256  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||||||    
T  33971706 gctatttgacaacaatttgtactaaataggatattgcataacaatagcga 33971657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 3110516 - 3110568
Alignment:
Q  183 tagtattatagcgcctctatagctgctatttgacaacattttgtactaaatag 235  Q
    ||||||||||||||| |||||||  ||||||||||||  ||||||||||||||    
T  3110516 tagtattatagcgccgctatagccactatttgacaacgctttgtactaaatag 3110568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 20265521 - 20265605
Alignment:
Q  198 tctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||| || || |||||||||| | |||||||| || |||||||||||| ||||| | ||| |||||| | |||||||||||    
T  20265521 tctatagcagcaatgtgacaacattgtatactaaattgcgtatcgcaaaacattagcggtgtgtccaaattccgctacgctatag 20265605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 29378577 - 29378509
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||||| ||||| | ||||||| ||||||| ||||||| ||||||| | |||||||||||||    
T  29378577 tatagccgctattagacaatactttgtacaaaatagcgtatcgcagaacaatatcaatttgttcaaatt 29378509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 29728827 - 29728763
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 263  Q
    ||||||| ||||||||| |||| ||||||||| || ||| ||||||||||||||||  |||||||    
T  29728827 ctatagccgctatttgagaacactttgtactacattgcaaatcgcaaaacaatagcagtttgttc 29728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 12750028 - 12749997
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatag 235  Q
    ||||||||||||||||||||||||||||||||    
T  12750028 gctgctatttgacaacattttgtactaaatag 12749997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 16733711 - 16733773
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    |||||||| |||| | |||||||||||||  |||||| ||||||||| |||| ||||||||||    
T  16733711 ctatttgaaaacactgtgtactaaatagcgaatcgcagaacaatagcaatttattcaaatttc 16733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 29415748 - 29415802
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 262  Q
    |||||||||||||||||||||| ||  ||||||| || ||||||||| |||||||    
T  29415748 ctatttgacaacattttgtactgaacggcatatcacagaacaatagcaatttgtt 29415802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 31235209 - 31235251
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcg 242  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||    
T  31235209 tatagctgctatttgacaacactttgaactaaattgcatatcg 31235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 18104112 - 18104051
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||| |||||| ||| |||||  |||||  ||||||||||||||||||| ||||    
T  18104112 gctatttgacaagattttgaactgaatagtgtatcgtgaaacaatagcgatttgttctaatt 18104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 25694401 - 25694470
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||  |||||||||||||||||||||| |||  | ||||||| ||| ||||||  |||||||||||    
T  25694401 ctatagcgtctatttgacaacattttgtactgaatcacttatcgcagaacgatagcgggttgttcaaatt 25694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 235
Target Start/End: Complemental strand, 44460393 - 44460364
Alignment:
Q  206 tgctatttgacaacattttgtactaaatag 235  Q
    ||||||||||||||||||||||||||||||    
T  44460393 tgctatttgacaacattttgtactaaatag 44460364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 31246953 - 31246993
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatat 240  Q
    |||| ||||||||||||||||||||| ||||||| ||||||    
T  31246953 tataactgctatttgacaacattttgaactaaattgcatat 31246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 32562450 - 32562372
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    |||||||||| |||||| ||| ||||| ||||  |||||||||||||  ||||||| || ||||||||||| |||||||||    
T  32562450 tatagcgcctttatagc-gctgtttgataacaacttgtactaaatagtgtatcgcagaataatagcgattt-ttcaaattt 32562372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 33623675 - 33623735
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| |||||||| ||||||||||||||||||| |   |||||||| |||||||| |||||    
T  33623675 ctatatgacaacactttgtactaaatagcatatagtggaacaatagtgatttgttaaaatt 33623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 35538056 - 35538104
Alignment:
Q  192 agcgcctctatagctgctatttgacaacattttgtactaaatagcatat 240  Q
    |||||| ||||||| | ||||||||||||||||||| |||| |||||||    
T  35538056 agcgccgctatagccgttatttgacaacattttgtattaaagagcatat 35538104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 36300442 - 36300414
Alignment:
Q  208 ctatttgacaacattttgtactaaatagc 236  Q
    |||||||||||||||||||||||||||||    
T  36300442 ctatttgacaacattttgtactaaatagc 36300414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 38475936 - 38475860
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactac 275  Q
    |||||||| |||||| |||||| ||||  ||| ||||||||||||  |||||||||||||  ||||| || ||||||    
T  38475936 ctatagctactatttaacaacactttgacctacatagcatatcgcggaacaatagcgattgattcaagttccactac 38475860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 42172801 - 42172865
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||||||| | | |||| ||| ||| ||| | | |||||||||||||||    
T  42172801 gctgctatttgacaacattttgtaattactagcgtatggcagaactacaacgatttgttcaaatt 42172865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 25252109 - 25252041
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||||| |||| ||||||||||||||||||||||| |||| | |||||| ||||||||||||||||    
T  25252109 ctatagctgttattagacaacattttgtactaaatagcgtatcacgaaacaagagcgatttgttcaaat 25252041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 32251006 - 32251078
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 280  Q
    |||||| ||| |||||||||||||||||| ||| ||| |||||||||||| ||||||||||||| ||||||||    
T  32251006 ctatttcacagcattttgtactaaatagcttattgcataacaatagcgatgtgttcaaatttcagtacgctat 32251078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 50402635 - 50402710
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||| ||||||||||    
T  50402635 tatagcgcagctatagctgctatttgacaacactttatactaaatagcatattgcggaacaatagtgatttgttca 50402710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 43381245 - 43381176
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||  || ||||||||||| ||||||||    
T  43381245 ctatagcttctatttgacaacattttgtattaaattgcatatcgcggaataatagcgatttattcaaatt 43381176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 15802637 - 15802573
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||| ||||||||| ||| ||||||||  || ||||||||||||||||||||    
T  15802637 gctgctatttgacaacactttgtactatataacatatcgcggaagaatagcgatttgttcaaatt 15802573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 38692427 - 38692510
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||| |||||||||||||| |||||||||||| |  ||| |||||||| ||||| |||||||||||| | |||| ||||||    
T  38692427 ctatagccgctatttgacaacactttgtactaaatcgtgtattgcaaaacactagcggtttgttcaaattccgctaccctatag 38692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 50251516 - 50251591
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgc 243  Q
    |||||||||| |||||| |  | |||||||  |||||| |||||||||||||||||| ||||||||||||||||||    
T  50251516 aattccgctacacaataatgctttagcgccgttatagcagctatttgacaacattttctactaaatagcatatcgc 50251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 53855744 - 53855791
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagc 254  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  53855744 gctatttgacaacattttgtactaaatagcatattgcagaacaatagc 53855791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 21754299 - 21754221
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 285  Q
    |||||||||||||| ||||||||||||||  ||||||  ||||||||||||||||  ||||||| ||||  ||||||||    
T  21754299 gctatttgacaacaatttgtactaaatagtgtatcgcggaacaatagcgatttgtctaaatttcgctacaatatagtgg 21754221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 25490602 - 25490545
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    
T  25490602 tatttgacaacattttgtactaaatatcatatcacagatcaatagtgatttgttcaaa 25490545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 14200053 - 14199985
Alignment:
Q  214 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||| ||||||| ||||||||||||||| |||| ||||  |||||||||||| ||||| |||||||    
T  14200053 gacaacactttgtaccaaatagcatatcgcagaacattagcagtttgttcaaattacactaagctatag 14199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 48236287 - 48236363
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||||||||||||||||  ||||||||||||||| | ||| || || |||||||||||||||| ||| | |||||||    
T  48236287 ctatttgacaacattttacactaaatagcatatcccgaaataacagtgatttgttcaaatttcgctatgttatagtg 48236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 10275819 - 10275894
Alignment:
Q  208 ctatttgacaacatttt-gtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||||| ||||| ||| |||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||    
T  10275819 ctatttgacaatatttttgtaataaatagcatatcgcagaacaacaatgatttgttcaaattccactatgctatag 10275894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 2990983 - 2991045
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||||||||||||||||||||||| |||||   ||||| ||  |||||||||||||||    
T  2990983 ctatttgacaacattttgtactaaatagcgtatcgtggaacaaaagaaatttgttcaaatttc 2991045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 6994393 - 6994327
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||||||||||||| ||| |||||||||||||| || |||||||| | |||||| ||||| |||||    
T  6994393 ctatttgacaacattctgtgctaaatagcatatcccataacaatagtgttttgtttaaattccacta 6994327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 11338573 - 11338510
Alignment:
Q  207 gctatttgacaacattttgtac--taaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||||   |||||||||||||||| ||||| ||||| |||| ||||||    
T  11338573 gctatttgacaacattttgtatattaaatagcatatcgcagaacaacagcgacttgtccaaatt 11338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 16169188 - 16169232
Alignment:
Q  223 ttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||    
T  16169188 ttgtactcaatagcatatcgcagaacaatagcgattagttcaaat 16169232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 29279293 - 29279205
Alignment:
Q  179 acaatagtattatagcgcctctatagctgctatttgacaacattttgtact-aaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||||||| |||||||||| | ||||| ||||||||||||| |  |||| | ||||| |||||| | ||||||||| ||||||||||||    
T  29279293 acaatagtgttatagcgccgccatagccgctatttgacaacttgctgtattaaaatatcatatcacgaaacaatagtgatttgttcaaa 29279205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 31386057 - 31386136
Alignment:
Q  188 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||  |||||||||| |||||||||||| |||| |||||||| | |||| ||||||| || | |||||||||||||    
T  31386057 ttatagcggttctatagctgttatttgacaacactttgaactaaataac-tatcacaaaacattaactatttgttcaaatt 31386136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 51295736 - 51295684
Alignment:
Q  214 gacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||||| |||||    
T  51295736 gacaacattttgtactaaatagcgtatcacgaaacaataacgatttgatcaaa 51295684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 54842196 - 54842244
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 255  Q
    |||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  54842196 gctatttgacaacattttatactaaatagcgtatcacagaacaatagcg 54842244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 27016927 - 27016970
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||    
T  27016927 atttgacaacattttgtactaaatagtatatcacaaaataatag 27016970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 20690081 - 20690139
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||||||| |||||||||  ||||||||  ||||||  |||||||||||||||||||||    
T  20690081 ctatttgataacattttgctctaaatagtgtatcgccgaacaatagcgatttgttcaaa 20690139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 42064218 - 42064160
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaa 247  Q
    ||||||||| | || || || ||||||||||| |||||||||||||||| |||||||||    
T  42064218 tatagcgccgcaatggcagccatttgacaacactttgtactaaatagcagatcgcaaaa 42064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 48198079 - 48198141
Alignment:
Q  222 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc-actacgctatagt 283  Q
    ||||||||||||| |||||| || ||||||||||||| ||||||| ||| |||| ||||||||    
T  48198079 tttgtactaaataacatatcacagaacaatagcgattagttcaaaattctactaagctatagt 48198141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 1813349 - 1813265
Alignment:
Q  188 ttatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 273  Q
    |||||| ||| |||||||  ||||||||||||| || || |||| | |||||||||  |||||||| |||||||||||||| ||||    
T  1813349 ttatagtgccgctatagccactatttgacaacacttcgtgctaa-tggcatatcgcggaacaatagtgatttgttcaaattccact 1813265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 24830196 - 24830135
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    |||||||||||||||| ||||||||||  ||| | | |||||||||||||| ||||| ||||    
T  24830196 tatttgacaacattttatactaaatagtgtattgtagaacaatagcgattttttcaactttc 24830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 32954328 - 32954243
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtgg 285  Q
    ||||||| |||| |||||||||||||||||||||||| ||| |   || || ||| |||||| |||||| | ||| ||||||||||    
T  32954328 tatagcttctatatgacaacattttgtactaaatagcgtattgtggaataaaagcaatttgtccaaattccgctatgctatagtgg 32954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 39544208 - 39544175
Alignment:
Q  202 tagctgctatttgacaacattttgtactaaatag 235  Q
    |||||||| |||||||||||||||||||||||||    
T  39544208 tagctgctctttgacaacattttgtactaaatag 39544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 43307600 - 43307673
Alignment:
Q  180 caatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatag 253  Q
    |||||||  ||||||||| ||||| |  |||| | |||||||||||||||||| ||| |||| |||||||||||    
T  43307600 caatagtgctatagcgccactataaccactatctaacaacattttgtactaaacagcgtatcacaaaacaatag 43307673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 50376231 - 50376264
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaa 232  Q
    ||||||| ||||||||||||||||||||||||||    
T  50376231 ctatagccgctatttgacaacattttgtactaaa 50376264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 162963 - 162903
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||| |||||||||||||||||  |||||| || |||| | |||||||||||||    
T  162963 ctatttcacaatattttgtactaaatagcgcatcgcagaataataacaatttgttcaaatt 162903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 29208325 - 29208265
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| | |||||||||||||||| ||| |||||   ||||||| |||||||||||||||    
T  29208325 ctatttcaaaacattttgtactaaacagcgtatcgtggaacaataacgatttgttcaaatt 29208265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 34363284 - 34363256
Alignment:
Q  207 gctatttgacaacattttgtactaaatag 235  Q
    |||||||||||||||||||||||||||||    
T  34363284 gctatttgacaacattttgtactaaatag 34363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 33120560 - 33120617
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||    
T  33120560 gctatttgacaacattttgtactaaatagcatattgcagaacaacaacgatttgttca 33120617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 2302706 - 2302766
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||| |||||||||||||||||| ||||||||  ||||||| |||||||||||||||    
T  2302706 ctatttgataacattttgtactaaataacatatcgcctaacaatatcgatttgttcaaatt 2302766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 27483149 - 27483037
Alignment:
Q  170 ttccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||| | |||||||  ||||| ||| ||||||| |||||||||||| ||||||||||  ||||| |||| || || ||||||| ||||||||||||     
T  27483149 ttccgctgtgcaatagtgctatagtgccactatagccgctatttgacaatattttgtactggatagcgtatctcagaataatagcggtttgttcaaattc 27483050  T
Q  270 cactacgctatag 282  Q
    | ||||| |||||    
T  27483049 ctctacgttatag 27483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 30560179 - 30560088
Alignment:
Q  178 tacaatagtattatagcgcctctatagctgctatttgacaaca-ttttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||  ||||| ||| |||||||||| ||||||||||| |||| ||||||||||  |||||||||||||||| | ||||| ||||||    
T  30560179 tacaatagtgctatagtgccactatagctgcaatttgacaacatttttttactaaatagtgtatcgcaaaacaatagtggtttgtccaaatt 30560088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 26273036 - 26273114
Alignment:
Q  204 gctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| ||||||| ||||||||||| ||| |||| || |||||||| ||||| |||||||| | |||||||||||    
T  26273036 gctgctattggacaacactttgtactaaacagcgtatcacagaacaatagtgatttattcaaattcctctacgctatag 26273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 8282849 - 8282910
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||| ||||||||||| ||||| ||||||| ||| |||||||| |||||||||||||    
T  8282849 gctatttgagaacattttgtaataaatcgcatatcacaagacaatagctatttgttcaaatt 8282910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 21227004 - 21226911
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||  ||||||| ||||||||||||||||||||||| |||||| ||| |   |||||||||  |||||||||||| | ||| |||||||    
T  21227004 tatagcgctactatagcagctatttgacaacattttgtactgaatagcgtatggaggaacaatagctttttgttcaaattccgctatgctatag 21226911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 37632120 - 37632205
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||||||||||||| | ||||||||| |||||||| |||||   |||| || |||||||||| |||| ||||||||| |||||    
T  37632120 ctatagctgctatttgataccattttgtaataaatagcgtatcgtggaacagtaacgatttgttccaattccactacgctgtagtg 37632205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 45371098 - 45371159
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||| | ||||| ||||||    
T  45371098 gctatttgacaacattttgtactaaatagcatattgcggaacaatagtggtttgtccaaatt 45371159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 4050511 - 4050427
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcga-tttgttcaaatttcactacgctatagt 283  Q
    |||| |||||||||||||| |||||| |||||||||||||| |  |||||||| ||| ||| |||||||| | ||||||||||||    
T  4050511 tatacctgctatttgacaatattttggactaaatagcatatggtgaaacaataacgatttttttcaaattccgctacgctatagt 4050427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 27400604 - 27400521
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||| |||||||| | ||||||||||  ||||||||  ||  ||||||||||||||||||||||| ||| | |||||||||    
T  27400604 atagctgttatttgacgatattttgtactttatagcatactgcggaacaatagcgatttgttcaaattccaccatgctatagtg 27400521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 13869826 - 13869884
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaa 247  Q
    |||||| ||||||| ||  || ||||||||||||||||||||||||||||||| |||||    
T  13869826 tatagcacctctattgccactgtttgacaacattttgtactaaatagcatatcacaaaa 13869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 30692459 - 30692517
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaa 265  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||  | |||||||||    
T  30692459 gctatttgacaacactttgtactacatagcatatggcaaaacaatattggtttgttcaa 30692517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29749300 - 29749219
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||  ||||| ||||||||| |||||| ||| |||||  || |||||| ||||||||||  ||||||||||||||||    
T  29749300 tatagcgctgctataactgctatttaacaacactttttactagttaacatatcacaaaacaataatgatttgttcaaatttc 29749219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 3556650 - 3556718
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    |||||||||| ||||| || |||||||||| || || |  ||||||||||||||||||| |||||||||    
T  3556650 aattccgctacacaatggtgttatagcgccactgtaacaactatttgacaacattttgtgctaaatagc 3556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 24857327 - 24857430
Alignment:
Q  203 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctattt 302  Q
    |||| ||||||||||||||||||||| ||||||||||||    || ||| |||||||||| |||||   | | |||||||| |||||| |||||| ||||    
T  24857327 agcttctatttgacaacattttgtacaaaatagcatatcatggaagaatggcgatttgttaaaattctgcaaagctatagt-gctatagcgccgccattt 24857425  T
Q  303 aacaa 307  Q
    |||||    
T  24857426 aacaa 24857430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 40710077 - 40710160
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 273  Q
    |||||| || |||||||||||||| | |||||||||||||| |||| || |||||| |||||||   ||||||||||||| ||||    
T  40710077 tatagcaccactatagctgctattagtcaacattttgtact-aataacacatcgcataacaataataatttgttcaaattccact 40710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 13850991 - 13851079
Alignment:
Q  190 atagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 280  Q
    ||||| ||||||| ||  |||||||| ||||||||||||||||||| ||||| ||||  |||||| | ||| ||||||| | |||||||||    
T  13850991 atagcacctctattgccactatttgataacattttgtactaaatagtatatcacaaa--aatagcaacttgctcaaattcctctacgctat 13851079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 18737733 - 18737690
Alignment:
Q  227 actaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||||||||| | |||||||||| |||||||||||||||    
T  18737733 actaaatagcatatcccgaaacaatagcaatttgttcaaatttc 18737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 24855531 - 24855602
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctat 280  Q
    ||||||||||  ||| ||||||||||| |||  ||| |||||||| |||||||||||||| | |||||||||    
T  24855531 tatttgacaatttttagtactaaatagtatactgcagaacaatagtgatttgttcaaattccgctacgctat 24855602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 26445499 - 26445574
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttca 264  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||   ||| | |||||| || ||||||||||    
T  26445499 tatagcgccactataactgctatttgacaacgctttgtactaaatagtggatcacgaaacaaaagtgatttgttca 26445574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 32616769 - 32616828
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||||||||| | |||||||||||||||||| |||| |||  |||| ||||||||||||    
T  32616769 ctatttgacaatactttgtactaaatagcataacgcagaactgtagcaatttgttcaaat 32616828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 44617732 - 44617697
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatag 235  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44617732 tatagctgctatttgacaacactttgtactaaatag 44617697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 9112478 - 9112412
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    |||||| |||| ||| ||||||||||||||||||||| |||||||| ||| || | ||||| |||||    
T  9112478 ctatttcacaatattctgtactaaatagcatatcgcagaacaatagtgatctggttaaattccacta 9112412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 12196992 - 12196923
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||||||||||| ||||||  |||||||||| | ||||| || ||||||||||| |||||| ||||||    
T  12196992 ctatagctgctattttacaacacattgtactaaaca-catatagcgaaacaatagcggtttgttaaaattt 12196923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 12441420 - 12441351
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||||||||||| ||||||  |||||||||| | ||||| || ||||||||||| |||||| ||||||    
T  12441420 ctatagctgctattttacaacacattgtactaaaca-catatagcgaaacaatagcggtttgttaaaattt 12441351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 2701749 - 2701657
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| ||||| | |||||  ||||| | ||||||| ||||||||||| ||  |||| |||||||||||||| ||| | |||||||||||    
T  2701749 tatagcgccgctataacggctatc-gacaataatttgtacaaaatagcatattgcggaacattagcgatttgttcatattccgctacgctatag 2701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 4114796 - 4114736
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||||||||||| ||| || | ||||| | |||||||| ||||||||||||||    
T  4114796 gctatttgacaacattttgtagtaacta-cttatcgtagaacaatagtgatttgttcaaatt 4114736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 14928232 - 14928301
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    ||||||||||| |||||||| |||||| ||||    |||||||  |||||||||||||||||||| ||||    
T  14928232 atttgacaacactttgtacttaatagcgtatcatgtaacaataaagatttgttcaaatttcactaagcta 14928301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 234
Target Start/End: Complemental strand, 16950318 - 16950289
Alignment:
Q  205 ctgctatttgacaacattttgtactaaata 234  Q
    ||||||||||||||||||||||||||||||    
T  16950318 ctgctatttgacaacattttgtactaaata 16950289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 42843424 - 42843363
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    ||||||||||||| ||| |||| |||||| |||| |  ||||||||| ||||||||||||||    
T  42843424 ctatttgacaacaatttatacttaatagcttatcccggaacaatagcaatttgttcaaattt 42843363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 44806319 - 44806258
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||| ||||||||||||||| |||||  ||| | ||||  ||||||||||||    
T  44806319 gctatttgacaacactttgtactaaatagcctatcgtgaaatagtagcagtttgttcaaatt 44806258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 1318620 - 1318716
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact-acgctatagtg 284  Q
    ||||||| | ||| ||||||||||||||||||| | || ||||||||| ||| ||  |||||||  || ||||||||||| || | |||||||||||    
T  1318620 tatagcgtcactacagctgctatttgacaacatgtagttctaaatagcttattgcggaacaataaggacttgttcaaattccattcacgctatagtg 1318716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 3238297 - 3238345
Alignment:
Q  220 attttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||| || ||||| ||| ||||||||||||| |||||||||    
T  3238297 attttgtactaattaacatattgcagaacaatagcgattagttcaaatt 3238345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 8284356 - 8284420
Alignment:
Q  215 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgcta 279  Q
    |||||| ||||||||||| ||| ||||||  |||||| | |||||||||||||| ||||| ||||    
T  8284356 acaacactttgtactaaaaagcgtatcgcggaacaatggtgatttgttcaaattccactatgcta 8284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 12856408 - 12856481
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||| |||| | ||||||||||||||| ||||| ||  |||| || ||||||||||||| ||||||| |||||||    
T  12856408 tatttaacaatagtttgtactaaatagcgtatcgtaa--caattgcaatttgttcaaattccactacggtatagtg 12856481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 14730378 - 14730294
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 283  Q
    |||||| ||||||||||||  | |||||||||| ||| |||| | | ||||| |||||| || ||||||||| | ||||||||||    
T  14730378 ctatagatgctatttgacagtactttgtactaagtagtatattgtagaacaacagcgatctgatcaaatttcgccacgctatagt 14730294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 39551021 - 39550949
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgt 261  Q
    ||||| ||| ||||||| |||||||||||||| ||  |||| |||||  |||| ||||||||||||| |||||    
T  39551021 tatagtgccactatagccgctatttgacaacacttcatactcaatagtgtatcacaaaacaatagcggtttgt 39550949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 43935142 - 43935226
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||| |||||||| |||| ||||||| ||||| ||| |||| |  ||||||||  ||||||||||||| ||||| || ||||||    
T  43935142 tatagttgctatttcacaatattttgtgctaaacagcgtatcacggaacaatagtcatttgttcaaattccactatgcaatagtg 43935226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 415214 - 415145
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||  |||||| ||||||||||||||||||||||| ||| | |||||||||||| |||||||||||    
T  415214 ctatagcaactatttcacaacattttgtactaaatagcaaatcacgaaacaatagcgacttgttcaaatt 415145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 55314554 - 55314493
Alignment:
Q  210 atttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttca 271  Q
    |||||| |||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  55314554 atttgataacactttgtactaattagcatatcgcagaacaatagcaatttgttcaaatttca 55314493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 13298589 - 13298529
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||| || |||||||||||||||||||| || |||||||| ||||||||||||||    
T  13298589 ctatttgacagcactttgtactaaatagcatatcacagaacaatagtgatttgttcaaatt 13298529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 50794643 - 50794568
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    ||||| |||||||||||||||| |||||||||| |||||||  ||| ||||||  ||||||||||||||| |||||    
T  50794643 ctataactgctatttgacaacactttgtactaactagcatagtgcagaacaatgacgatttgttcaaattccacta 50794568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 34581658 - 34581592
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 255  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||| |||| |  ||||||||||    
T  34581658 tatagcgctactatagccgctatttgacaacattttgtactaaatagcgtatcacggaacaatagcg 34581592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 2843583 - 2843636
Alignment:
Q  209 tatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgtt 262  Q
    |||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  2843583 tatttgacaacattttgtactaaatagtgtatcgcagaacaatagtgatttgtt 2843636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 3301608 - 3301687
Alignment:
Q  189 tatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| | ||||||||||||||| |||| || |||||||||||||  ||||||||||||| ||| | || ||||||||    
T  3301608 tatagcgtcactatagctgctatttaacaaaatattgtactaaatagagtatcgcaaaacaacagcaaatttttcaaatt 3301687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 7295176 - 7295045
Alignment:
Q  137 ttgtcaatcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    ||||||||| | ||| |||||||||||||  | |||||| | || | |||| |||||||||| | ||||  ||  |||||||  ||||| | ||||||||    
T  7295176 ttgtcaatcacggaaaatagtagtttgttcaagttccgcgacactacagtactatagcgcctttgtagccacttattgacaatgttttgcattaaatagc 7295077  T
Q  237 atatcgcaaaacaatagcgatttgttcaaatt 268  Q
     |||| ||||||||||| ||||||||||||||    
T  7295076 ctatcacaaaacaatagtgatttgttcaaatt 7295045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 17223482 - 17223403
Alignment:
Q  203 agctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| |||||||| |||||||||||| |  ||||||||||||| | | ||||||| ||||| | |||||||||||    
T  17223482 agctgctatatgacaacaatttgtactaaatcgtgtatcgcaaaacaacaacaatttgttaaaattccgctacgctatag 17223403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 20709960 - 20710031
Alignment:
Q  211 tttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||| | ||||| |||||    
T  20709960 tttgataacactttgcactaaatagcgtattgcagaacaatagcgatttgttcaaattccgctacgttatag 20710031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 25402909 - 25402826
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||| ||||||||||||||||||||||| || ||| | ||||   ||||||||||||| ||||||||||   |||||||||||    
T  25402909 ctataactgctatttgacaacattttgtattacatatcgtatcattaaacaatagcgatctgttcaaattctgctacgctatag 25402826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 31675030 - 31675093
Alignment:
Q  196 cctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgattt 259  Q
    ||||||||||| | ||||||||||||||||||||||||| | |||| ||| |||||||| ||||    
T  31675030 cctctatagctccaatttgacaacattttgtactaaataacgtatcacaagacaatagcaattt 31675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 27722407 - 27722473
Alignment:
Q  202 tagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||||||||| |||||||||| ||||||||||||   ||||||||| ||| |||||||||    
T  27722407 tagctgatatttgacaatattttgtacttaatagcatatcgtggaacaatagcaattagttcaaatt 27722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 34417889 - 34417827
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttc 263  Q
    ||||| |||||||||||||| ||||||||||||||   |||||| ||||||||| ||||||||    
T  34417889 atagcggctatttgacaacactttgtactaaatagaggatcgcagaacaatagctatttgttc 34417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 3144586 - 3144541
Alignment:
Q  190 atagcgcctctatagctgctatttgacaacattttgtactaaatag 235  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||    
T  3144586 atagcgcctctatcgctgccagttgacaacattttgtactaaatag 3144541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 37538484 - 37538421
Alignment:
Q  208 ctatttgacaacattttgtacta---aatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||| |||||| ||   | ||||||| ||||||||||||||||||||||||||||    
T  37538484 ctatttgacaacactttgtaatagtaagtagcataccgcaaaacaatagcgatttgttcaaatt 37538421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 37579590 - 37579651
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||| || |||||||||||||||||||  ||||||| |||||| || |||||    
T  37579590 gctatttgacaacacttagtactaaatagcatatcgcggaacaataacgatttattaaaatt 37579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 48244443 - 48244508
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcact 273  Q
    ||||||||||||||  ||||||||| ||  ||||||| ||||||||||||||||| ||||| ||||    
T  48244443 ctatttgacaacatactgtactaaacagtgtatcgcagaacaatagcgatttgtttaaattccact 48244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 56049770 - 56049815
Alignment:
Q  188 ttatagcgcctctatagctgctatttgacaacattttgtactaaat 233  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||    
T  56049770 ttatagcgctactatagctgctatttgacaacactttgtactaaat 56049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 1202394 - 1202434
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaa 247  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  1202394 gctatttgacaatattttatactaaatagcatatcgcaaaa 1202434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 1276986 - 1276902
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    ||||||||||||||||||| | ||| |||| || ||| |||| || |||||||| | |||||||||||||| ||| | |||||||    
T  1276986 tatagctgctatttgacaaaactttttactgaacagcgtatcacataacaatagtggtttgttcaaatttccctatgatatagtg 1276902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 2562550 - 2562482
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||||||||  |||||||||||| ||| ||||   |||  |||||||||||||||||||    
T  2562550 tatagctgctatttgacaatgttttgtactaaacagcgtatcaggaaattatagcgatttgttcaaatt 2562482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 20989561 - 20989525
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatag 235  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20989561 ctatagccgctatttgacaacattttgtactaaatag 20989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 39032511 - 39032635
Alignment:
Q  158 agtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgat 257  Q
    ||||||||  ||||| ||||  |||||||  ||||||||| || ||||   |||| ||||||||||||||| ||||| |||||| |  | || ||||| |    
T  39032511 agtttgttgaaattctgctacgcaatagtgctatagcgcccctgtagccattattcgacaacattttgtaccaaataacatatcacggagcattagcggt 39032610  T
Q  258 ttgttcaaatttcactacgctatag 282  Q
    ||||||||| | |||||||||||||    
T  39032611 ttgttcaaactccactacgctatag 39032635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 13458783 - 13458866
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagtg 284  Q
    |||| ||| ||||||||||| ||| ||||||||||| |||  |  |||||| | |||||||||||||||||||| | |||||||    
T  13458783 atagttgccatttgacaacactttatactaaatagcgtattacggaacaatggtgatttgttcaaatttcactatgatatagtg 13458866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 18968343 - 18968308
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatag 235  Q
    |||||| |||||||||||||||||||||||||||||    
T  18968343 tatagccgctatttgacaacattttgtactaaatag 18968308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 19062218 - 19062274
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||||| |||| | |||||||||||||||||||  ||||||||||| ||||||||||||    
T  19062218 ctattttacaaaactttgtactaaatagcatat--caaaacaatagagatttgttcaaa 19062274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 39064896 - 39064935
Alignment:
Q  243 caaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  39064896 caaaacaatagcaatttgttcaaattccactacgctatag 39064935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 47789232 - 47789165
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    |||||||  ||||||||||||| ||||||||||||||  ||| ||| ||| ||| |||||||||||||    
T  47789232 ctatagccactatttgacaacagtttgtactaaatagagtattgcagaacgataacgatttgttcaaa 47789165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 26275534 - 26275600
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaat 267  Q
    ||||| ||||||| |||| ||||||||||||||||| |||     ||||||||||||||||||||||    
T  26275534 atagccgctatttcacaatattttgtactaaatagcgtattttggaacaatagcgatttgttcaaat 26275600  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 33714228 - 33714294
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcacta 274  Q
    |||||| |||| |||||||||||||| || |||||   ||||| ||||||||||||||||| |||||    
T  33714228 ctatttcacaatattttgtactaaatggcttatcgtggaacaacagcgatttgttcaaattccacta 33714294  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 34417400 - 34417346
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcg 255  Q
    ||||| |||||||||||||| |||||||||||||||  |||||  ||||||||||    
T  34417400 atagcggctatttgacaacactttgtactaaatagcggatcgcggaacaatagcg 34417346  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 38596771 - 38596717
Alignment:
Q  215 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaattt 269  Q
    |||| |||||||||| |||||  |||||||||||| ||||||||| |||||||||    
T  38596771 acaatattttgtactgaatagtgtatcgcaaaacagtagcgatttcttcaaattt 38596717  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 4762551 - 4762580
Alignment:
Q  207 gctatttgacaacattttgtactaaatagc 236  Q
    ||||||||||||||||||||||||||||||    
T  4762551 gctatttgacaacattttgtactaaatagc 4762580  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 9318759 - 9318706
Alignment:
Q  215 acaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||| |||||||||||||||||||||| | ||||||||   |||||||||||||    
T  9318759 acaatattttgtactaaatagcatatcactaaacaatatgaatttgttcaaatt 9318706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 27099033 - 27098969
Alignment:
Q  246 aacaatagcgatttgttcaaatttcactacgctatagtggctataacgccgctatttaacaatatt 311  Q
    ||||| ||||||||||||||||| ||||| || ||||| |||  ||||||||||||| ||||||||    
T  27099033 aacaacagcgatttgttcaaattccactaagccatagt-gctgcaacgccgctatttgacaatatt 27098969  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 47486045 - 47486106
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||| | || ||||||||||||||||||| ||||  |||||||| | ||||||||||||    
T  47486045 gctatttcaaaatattttgtactaaatagcatgtcgcggaacaatagaggtttgttcaaatt 47486106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 53768201 - 53768266
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaa 266  Q
    ||||||||||||||||||||  |||||||| |||||| |||    |||||||||| ||||||||||    
T  53768201 atagctgctatttgacaacacgttgtactatatagcagatcatggaacaatagcggtttgttcaaa 53768266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 682030 - 681986
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaata 252  Q
    |||||||||||||| ||||||||| ||||| |||||| |||||||    
T  682030 ctatttgacaacatgttgtactaactagcacatcgcagaacaata 681986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 3625804 - 3625744
Alignment:
Q  222 tttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatag 282  Q
    ||||||||| | ||| ||| ||| |||||||||||| |||||||||| |||||| ||||||    
T  3625804 tttgtactacacagcgtattgcagaacaatagcgatctgttcaaattccactacactatag 3625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 8721885 - 8721961
Alignment:
Q  168 aattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagcatatcgca 244  Q
    ||||||||||  |||||||   |||||| | |||||||| | ||| ||||| ||||||||||||||||| |||||||    
T  8721885 aattccgctacgcaatagtgccatagcgacactatagcttccattcgacaatattttgtactaaatagcgtatcgca 8721961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 30617270 - 30617329
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||| |||| |||||||||||| |||| |||| || |||| ||||||||||||||||||    
T  30617270 ctatttcacaatattttgtactaa-tagcgtatcacagaacactagcgatttgttcaaatt 30617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 34416967 - 34416907
Alignment:
Q  208 ctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    ||||||||||||| ||||||||||||||   |||||  ||||||||| |||||||| ||||    
T  34416967 ctatttgacaacactttgtactaaatagaggatcgcggaacaatagctatttgttccaatt 34416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 37854003 - 37854047
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatagcatatcgc 243  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||    
T  37854003 ctatagcttctatttaacaaaattttatactaaatagcatatcgc 37854047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 41367233 - 41367197
Alignment:
Q  199 ctatagctgctatttgacaacattttgtactaaatag 235  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41367233 ctataactgctatttggcaacattttgtactaaatag 41367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 11459 - 11518
Alignment:
Q  172 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 231  Q
    |||||| |||||||| |||||||||| |||||| |||||||| ||||||||||| |||||    
T  11459 ccgctacacaatagttttatagcgccactatagatgctatttcacaacattttgcactaa 11518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 4553 - 4494
Alignment:
Q  172 ccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaa 231  Q
    |||||| |||||||| ||||||| || |||||| |||||||| ||||||||||| |||||    
T  4553 ccgctacacaatagttttatagcaccactatagatgctatttcacaacattttgcactaa 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 2113 - 2031
Alignment:
Q  201 atagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatttcactacgctatagt 283  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| ||||| |  | ||||| |||||||| ||| | ||||||    
T  2113 atagcagctatttgacaacactttgtattaaatagcatatcgcagaacaacaatggtttgtccaaatttcgctatgatatagt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 4432 - 4389
Alignment:
Q  227 actaaatagcatatcgcaaaacaatagcgatttgttcaaatttc 270  Q
    ||||||||||||||| | |||||||||| |||||||||||||||    
T  4432 actaaatagcatatcccgaaacaatagcaatttgttcaaatttc 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 96735 - 96701
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaata 234  Q
    |||||| ||||||||||||||||||||||||||||    
T  96735 tatagccgctatttgacaacattttgtactaaata 96701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0898 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 594 - 534
Alignment:
Q  207 gctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||||||||| ||||||||||||||| |||| || |||||||| | |||||| |||||    
T  594 gctatttgacaacaatttgtactaaatagc-tatcccagaacaatagaggtttgtttaaatt 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 10608 - 10740
Alignment:
Q  137 ttgtcaatcgcagaagatagtagtttgtttgaattccgctatacaatagtattatagcgcctctatagctgctatttgacaacattttgtactaaatagc 236  Q
    |||| |||||||||| ||||  |||||||  ||||| ||||| ||| |||||||||  |||||||||||  ||| || |||| ||||| |||||| |||     
T  10608 ttgtgaatcgcagaaaatagcggtttgttcaaattctgctatgcaacagtattataatgcctctatagcctctactttacaatattttatactaattagt 10707  T
Q  237 atatcgcaa-aacaatagcgatttgttcaaatt 268  Q
     |||| ||| |||||||  |||||| |||||||    
T  10708 ttatcacaagaacaataatgatttgctcaaatt 10740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 13854 - 13786
Alignment:
Q  200 tatagctgctatttgacaacattttgtactaaatagcatatcgcaaaacaatagcgatttgttcaaatt 268  Q
    |||||||| |||||||||||| | |||||||||  |||||| |   |||||||| ||||||||||||||    
T  13854 tatagctgttatttgacaacactatgtactaaacggcatattgtggaacaatagagatttgttcaaatt 13786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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