View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1709_low_36 (Length: 259)
Name: NF1709_low_36
Description: NF1709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1709_low_36 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 24 - 259
Target Start/End: Complemental strand, 35901384 - 35901149
Alignment:
| Q |
24 |
tagtaatattaatcatttatatttacgatgattctttagaatccatttaaatgcctataagcatttggcagatacggttgaagaattgaagttgtattct |
123 |
Q |
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| T |
35901384 |
tagtaatattaatcatttatatttacgatgattctttagaatccatttaaatgcctataagcatttggcagatacggttgaagaattgaagttgtattct |
35901285 |
T |
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| Q |
124 |
aacaagtcgtgtatagtaaatatacttgtcatgtcttgcttgagattccacaccatgagttggattatggccaattaaaatgttcacattcccattgtca |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35901284 |
aacaagtcgtgtatagtaaatatacttgtcatgtcttgcttgagattccacaccatgagttggattatggccaattaaaatgttcacattcccattgtca |
35901185 |
T |
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| Q |
224 |
taatatgtcaataccattgaaggtacaaagtacttc |
259 |
Q |
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||||||||||||||||||||||||||| |||||||| |
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| T |
35901184 |
taatatgtcaataccattgaaggtacagagtacttc |
35901149 |
T |
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