View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17102_low_11 (Length: 298)

Name: NF17102_low_11
Description: NF17102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17102_low_11
NF17102_low_11
[»] chr3 (76 HSPs)
chr3 (84-281)||(31396453-31396639)
chr3 (1-56)||(27449170-27449225)
chr3 (1-60)||(48404942-48405001)
chr3 (1-54)||(43329763-43329816)
chr3 (1-56)||(26098895-26098950)
chr3 (1-55)||(5261019-5261073)
chr3 (1-55)||(19223531-19223585)
chr3 (1-55)||(29236126-29236180)
chr3 (1-54)||(8110421-8110474)
chr3 (1-54)||(9652660-9652713)
chr3 (1-54)||(11219220-11219273)
chr3 (1-54)||(13921407-13921460)
chr3 (1-54)||(18091547-18091600)
chr3 (1-54)||(19269864-19269917)
chr3 (1-54)||(21816803-21816856)
chr3 (1-54)||(25882652-25882705)
chr3 (1-54)||(26390634-26390687)
chr3 (1-53)||(11915840-11915892)
chr3 (1-56)||(8428253-8428308)
chr3 (1-56)||(11007681-11007736)
chr3 (1-56)||(29956454-29956509)
chr3 (1-56)||(30005609-30005664)
chr3 (1-55)||(7623530-7623584)
chr3 (1-59)||(10941660-10941718)
chr3 (1-55)||(18380106-18380160)
chr3 (1-54)||(1310959-1311012)
chr3 (1-54)||(8546327-8546380)
chr3 (1-54)||(13905038-13905091)
chr3 (1-54)||(17762724-17762777)
chr3 (5-54)||(18104530-18104579)
chr3 (1-54)||(19064044-19064097)
chr3 (1-45)||(29704041-29704085)
chr3 (7-54)||(1745488-1745535)
chr3 (5-56)||(3461308-3461359)
chr3 (1-56)||(6088226-6088281)
chr3 (1-47)||(4393357-4393403)
chr3 (1-47)||(18539886-18539932)
chr3 (5-55)||(21020151-21020201)
chr3 (5-54)||(5565808-5565857)
chr3 (1-54)||(11837214-11837267)
chr3 (5-54)||(20761950-20761999)
chr3 (1-56)||(29451176-29451232)
chr3 (1-55)||(23773559-23773613)
chr3 (5-54)||(6447246-6447295)
chr3 (1-54)||(11085342-11085395)
chr3 (11-52)||(11386427-11386468)
chr3 (1-54)||(21490034-21490087)
chr3 (5-54)||(46012728-46012777)
chr3 (6-54)||(10772053-10772101)
chr3 (6-54)||(10803808-10803856)
chr3 (8-56)||(19610427-19610475)
chr3 (1-49)||(26963254-26963302)
chr3 (5-53)||(27969001-27969049)
chr3 (7-54)||(8543556-8543603)
chr3 (5-56)||(31250174-31250225)
chr3 (8-54)||(15063992-15064038)
chr3 (6-56)||(15501549-15501599)
chr3 (8-54)||(30219427-30219473)
chr3 (5-55)||(36543835-36543885)
chr3 (5-55)||(36564438-36564488)
chr3 (5-55)||(47263264-47263314)
chr3 (5-54)||(17269604-17269653)
chr3 (5-54)||(21088836-21088885)
chr3 (1-38)||(28859673-28859710)
chr3 (5-54)||(46942573-46942622)
chr3 (8-55)||(37283612-37283659)
chr3 (5-51)||(1628301-1628347)
chr3 (8-54)||(5744505-5744551)
chr3 (8-54)||(5781464-5781510)
chr3 (8-54)||(16299950-16299996)
chr3 (6-56)||(26830439-26830489)
chr3 (5-51)||(28390059-28390105)
chr3 (5-54)||(23217208-23217257)
chr3 (8-49)||(40287486-40287527)
chr3 (18-54)||(20088504-20088540)
chr3 (14-54)||(27182658-27182698)
[»] chr4 (50 HSPs)
chr4 (1-57)||(7111943-7111999)
chr4 (1-55)||(19839263-19839317)
chr4 (1-54)||(4586758-4586811)
chr4 (1-54)||(22168352-22168405)
chr4 (1-57)||(9238622-9238678)
chr4 (1-55)||(9670478-9670532)
chr4 (1-55)||(38645834-38645888)
chr4 (1-55)||(45091345-45091399)
chr4 (1-54)||(5473933-5473986)
chr4 (1-54)||(13564915-13564968)
chr4 (1-54)||(30268988-30269041)
chr4 (1-54)||(30283148-30283201)
chr4 (1-54)||(38619931-38619984)
chr4 (1-54)||(44783567-44783620)
chr4 (1-53)||(4627079-4627131)
chr4 (6-54)||(27040025-27040073)
chr4 (6-54)||(55309212-55309260)
chr4 (1-55)||(54539370-54539424)
chr4 (5-54)||(32175737-32175786)
chr4 (1-54)||(45532579-45532632)
chr4 (1-57)||(29625409-29625465)
chr4 (1-54)||(2275677-2275731)
chr4 (4-54)||(13028816-13028866)
chr4 (1-47)||(18051923-18051969)
chr4 (1-55)||(42055481-42055535)
chr4 (5-54)||(18714990-18715039)
chr4 (1-54)||(19680424-19680477)
chr4 (1-54)||(25026641-25026694)
chr4 (5-54)||(30420033-30420082)
chr4 (5-54)||(46286229-46286278)
chr4 (1-49)||(37378628-37378676)
chr4 (1-56)||(9239279-9239334)
chr4 (1-56)||(36689761-36689816)
chr4 (5-55)||(8878971-8879021)
chr4 (1-47)||(30568006-30568052)
chr4 (5-54)||(1638535-1638584)
chr4 (1-54)||(12072046-12072099)
chr4 (5-54)||(22128312-22128361)
chr4 (5-53)||(24682328-24682376)
chr4 (5-56)||(12106070-12106121)
chr4 (8-55)||(33914150-33914197)
chr4 (5-54)||(4606829-4606878)
chr4 (5-54)||(9913346-9913395)
chr4 (5-54)||(16915457-16915506)
chr4 (5-54)||(30508075-30508124)
chr4 (8-55)||(9058951-9058998)
chr4 (8-54)||(25225188-25225234)
chr4 (5-50)||(38223598-38223643)
chr4 (8-56)||(5399700-5399748)
chr4 (5-53)||(29238511-29238559)
[»] chr1 (56 HSPs)
chr1 (1-57)||(9109972-9110028)
chr1 (1-55)||(8940993-8941047)
chr1 (1-54)||(28229455-28229508)
chr1 (1-54)||(46790086-46790139)
chr1 (1-60)||(50092292-50092351)
chr1 (5-55)||(12720899-12720949)
chr1 (1-55)||(20408159-20408213)
chr1 (1-54)||(6412053-6412106)
chr1 (1-54)||(6459303-6459356)
chr1 (1-54)||(45839378-45839431)
chr1 (1-54)||(46339445-46339498)
chr1 (1-54)||(51973510-51973563)
chr1 (6-54)||(12369951-12369999)
chr1 (1-48)||(46785964-46786011)
chr1 (5-55)||(29549508-29549558)
chr1 (1-54)||(4340493-4340546)
chr1 (1-54)||(9177186-9177239)
chr1 (1-54)||(17200010-17200063)
chr1 (1-54)||(19865330-19865383)
chr1 (1-54)||(22603634-22603687)
chr1 (1-54)||(41120737-41120790)
chr1 (6-54)||(7181555-7181603)
chr1 (1-56)||(22158888-22158943)
chr1 (6-53)||(25787998-25788045)
chr1 (5-55)||(9985326-9985376)
chr1 (1-55)||(12161900-12161954)
chr1 (1-47)||(18890556-18890602)
chr1 (5-55)||(48522608-48522658)
chr1 (1-54)||(15243171-15243224)
chr1 (1-54)||(23457983-23458036)
chr1 (5-54)||(41752523-41752572)
chr1 (5-54)||(52183768-52183817)
chr1 (5-56)||(17661140-17661191)
chr1 (7-54)||(20290321-20290368)
chr1 (8-54)||(50845330-50845376)
chr1 (5-54)||(18894900-18894949)
chr1 (5-54)||(38531170-38531219)
chr1 (5-54)||(46865333-46865382)
chr1 (6-53)||(9259184-9259231)
chr1 (5-44)||(30928388-30928427)
chr1 (1-47)||(9464189-9464235)
chr1 (5-55)||(12989942-12989992)
chr1 (8-54)||(14760960-14761006)
chr1 (6-56)||(39749024-39749074)
chr1 (5-50)||(16913581-16913626)
chr1 (5-54)||(19081818-19081867)
chr1 (5-54)||(19129706-19129755)
chr1 (5-54)||(27253855-27253904)
chr1 (6-54)||(20581001-20581049)
chr1 (8-55)||(13102409-13102456)
chr1 (7-54)||(18787913-18787960)
chr1 (8-54)||(13195676-13195722)
chr1 (5-55)||(13308819-13308869)
chr1 (6-55)||(12806835-12806884)
chr1 (5-54)||(41063287-41063336)
chr1 (1-37)||(41071852-41071888)
[»] chr8 (55 HSPs)
chr8 (1-56)||(8555302-8555357)
chr8 (1-56)||(27910762-27910817)
chr8 (1-56)||(27957181-27957236)
chr8 (1-55)||(24193195-24193249)
chr8 (1-55)||(25274681-25274735)
chr8 (1-54)||(4331062-4331115)
chr8 (1-54)||(19240951-19241004)
chr8 (1-54)||(19314135-19314188)
chr8 (1-54)||(19488061-19488114)
chr8 (1-54)||(24576024-24576077)
chr8 (1-56)||(17810382-17810437)
chr8 (1-56)||(32247993-32248048)
chr8 (1-55)||(16061938-16061992)
chr8 (1-54)||(3823217-3823270)
chr8 (1-54)||(4647755-4647808)
chr8 (1-54)||(25655858-25655911)
chr8 (1-54)||(27869322-27869375)
chr8 (1-54)||(33652651-33652704)
chr8 (5-56)||(8824913-8824964)
chr8 (1-52)||(9915043-9915094)
chr8 (7-54)||(11938834-11938881)
chr8 (7-54)||(30466954-30467001)
chr8 (1-55)||(22939397-22939451)
chr8 (1-54)||(13060931-13060984)
chr8 (1-54)||(18010060-18010113)
chr8 (5-54)||(19256300-19256349)
chr8 (1-54)||(21350562-21350615)
chr8 (1-54)||(23752286-23752339)
chr8 (1-54)||(25000431-25000484)
chr8 (1-54)||(30688020-30688073)
chr8 (1-54)||(43431559-43431612)
chr8 (5-56)||(29345159-29345210)
chr8 (1-55)||(29351007-29351062)
chr8 (1-55)||(6817138-6817192)
chr8 (1-47)||(14304313-14304359)
chr8 (1-54)||(24636736-24636790)
chr8 (1-55)||(25273327-25273380)
chr8 (5-54)||(9631492-9631541)
chr8 (5-54)||(15251689-15251738)
chr8 (1-54)||(21219240-21219293)
chr8 (1-54)||(32961743-32961796)
chr8 (1-54)||(33412977-33413029)
chr8 (1-54)||(42700657-42700710)
chr8 (8-56)||(17824614-17824662)
chr8 (1-57)||(31399505-31399561)
chr8 (2-54)||(40289421-40289473)
chr8 (8-54)||(10917918-10917964)
chr8 (4-56)||(5670167-5670219)
chr8 (5-54)||(6084246-6084295)
chr8 (5-54)||(6816383-6816432)
chr8 (5-54)||(17003350-17003399)
chr8 (8-52)||(37992190-37992234)
chr8 (7-54)||(24479813-24479860)
chr8 (8-54)||(17103865-17103911)
chr8 (8-56)||(8789931-8789979)
[»] chr6 (59 HSPs)
chr6 (1-56)||(6605494-6605549)
chr6 (1-55)||(6598550-6598604)
chr6 (1-55)||(9893049-9893103)
chr6 (1-55)||(26224514-26224568)
chr6 (1-54)||(15448471-15448524)
chr6 (1-54)||(24661009-24661062)
chr6 (1-54)||(28364997-28365050)
chr6 (1-54)||(30833960-30834013)
chr6 (1-56)||(16250800-16250855)
chr6 (1-56)||(20182231-20182286)
chr6 (1-56)||(22153705-22153760)
chr6 (1-55)||(495626-495680)
chr6 (1-54)||(1939242-1939295)
chr6 (1-54)||(15364458-15364511)
chr6 (1-54)||(15961407-15961460)
chr6 (1-54)||(22579349-22579402)
chr6 (5-53)||(5360499-5360547)
chr6 (1-51)||(21141025-21141075)
chr6 (1-51)||(25398088-25398138)
chr6 (3-53)||(27796835-27796885)
chr6 (1-54)||(2669395-2669448)
chr6 (1-54)||(5250225-5250278)
chr6 (1-54)||(11049751-11049804)
chr6 (1-54)||(12160847-12160900)
chr6 (1-54)||(12200780-12200833)
chr6 (1-54)||(15509242-15509295)
chr6 (5-56)||(9885333-9885384)
chr6 (2-53)||(10458851-10458902)
chr6 (7-54)||(21990175-21990222)
chr6 (1-54)||(6978363-6978416)
chr6 (1-54)||(18492455-18492508)
chr6 (5-54)||(28668190-28668239)
chr6 (1-54)||(33250708-33250761)
chr6 (1-56)||(12499302-12499358)
chr6 (1-56)||(12506631-12506687)
chr6 (1-56)||(12509543-12509599)
chr6 (5-56)||(2992705-2992756)
chr6 (1-48)||(5192195-5192242)
chr6 (1-55)||(17919622-17919676)
chr6 (5-54)||(8844168-8844217)
chr6 (5-50)||(12157380-12157425)
chr6 (9-60)||(14036706-14036757)
chr6 (15-54)||(33191180-33191219)
chr6 (5-55)||(12351585-12351635)
chr6 (8-54)||(12951801-12951847)
chr6 (1-55)||(13251378-13251432)
chr6 (5-55)||(14886651-14886701)
chr6 (9-55)||(18033525-18033571)
chr6 (5-55)||(18048878-18048928)
chr6 (8-54)||(22083931-22083977)
chr6 (1-54)||(26939673-26939726)
chr6 (8-56)||(11350272-11350320)
chr6 (8-51)||(11077742-11077785)
chr6 (5-48)||(20692817-20692860)
chr6 (5-47)||(9060180-9060222)
chr6 (8-54)||(11530318-11530364)
chr6 (5-50)||(1954970-1955015)
chr6 (5-54)||(6065527-6065576)
chr6 (7-56)||(9878513-9878562)
[»] chr5 (47 HSPs)
chr5 (1-56)||(38837669-38837724)
chr5 (1-54)||(12045813-12045866)
chr5 (1-54)||(36196480-36196533)
chr5 (1-56)||(4125186-4125241)
chr5 (1-56)||(8108858-8108913)
chr5 (1-54)||(618380-618433)
chr5 (1-54)||(746868-746921)
chr5 (1-54)||(7888883-7888936)
chr5 (5-54)||(16121839-16121888)
chr5 (1-54)||(16631874-16631927)
chr5 (1-55)||(26708584-26708638)
chr5 (1-55)||(26978318-26978372)
chr5 (1-54)||(2472714-2472767)
chr5 (1-54)||(10494823-10494876)
chr5 (1-54)||(12328226-12328279)
chr5 (1-54)||(13974078-13974131)
chr5 (1-54)||(15061059-15061112)
chr5 (1-54)||(17039631-17039684)
chr5 (1-54)||(28265475-28265528)
chr5 (5-54)||(35620344-35620393)
chr5 (1-54)||(36716200-36716253)
chr5 (1-54)||(40484130-40484183)
chr5 (6-54)||(5982737-5982785)
chr5 (6-54)||(7003730-7003778)
chr5 (1-53)||(17771969-17772021)
chr5 (1-45)||(23975721-23975765)
chr5 (1-56)||(36831888-36831943)
chr5 (1-55)||(25652582-25652636)
chr5 (1-54)||(8886851-8886904)
chr5 (1-54)||(24138841-24138894)
chr5 (6-54)||(23409072-23409120)
chr5 (10-54)||(29727895-29727939)
chr5 (5-56)||(20187939-20187990)
chr5 (5-54)||(13620127-13620176)
chr5 (1-54)||(17986815-17986868)
chr5 (15-54)||(19890986-19891025)
chr5 (8-54)||(25397788-25397834)
chr5 (8-54)||(33818561-33818607)
chr5 (5-54)||(10420252-10420301)
chr5 (9-54)||(16464723-16464768)
chr5 (5-55)||(27428011-27428061)
chr5 (5-51)||(35778231-35778277)
chr5 (5-54)||(17036412-17036461)
chr5 (5-54)||(20959598-20959647)
chr5 (5-54)||(23974576-23974625)
chr5 (5-54)||(25673229-25673278)
chr5 (5-53)||(33734974-33735022)
[»] chr7 (51 HSPs)
chr7 (1-55)||(3872186-3872240)
chr7 (1-55)||(18217915-18217969)
chr7 (1-55)||(22486480-22486534)
chr7 (1-55)||(23539318-23539372)
chr7 (1-54)||(3904478-3904531)
chr7 (1-56)||(7733310-7733365)
chr7 (1-56)||(21917332-21917387)
chr7 (1-56)||(27806104-27806159)
chr7 (1-56)||(31425509-31425564)
chr7 (1-55)||(6849210-6849264)
chr7 (1-55)||(23232125-23232179)
chr7 (1-55)||(23750735-23750789)
chr7 (1-54)||(1842980-1843033)
chr7 (1-54)||(9698538-9698591)
chr7 (1-54)||(11036593-11036646)
chr7 (1-54)||(23699825-23699878)
chr7 (1-54)||(28800964-28801017)
chr7 (1-56)||(2093360-2093415)
chr7 (5-55)||(1907445-1907495)
chr7 (1-55)||(21623107-21623160)
chr7 (1-54)||(20174106-20174159)
chr7 (1-54)||(20429551-20429604)
chr7 (1-54)||(24605924-24605977)
chr7 (1-54)||(37135285-37135338)
chr7 (1-54)||(47523650-47523703)
chr7 (1-60)||(23577183-23577242)
chr7 (1-54)||(2650828-2650881)
chr7 (5-54)||(15014405-15014454)
chr7 (5-54)||(48933226-48933275)
chr7 (1-55)||(21871654-21871708)
chr7 (5-54)||(687956-688005)
chr7 (1-54)||(33427776-33427828)
chr7 (6-54)||(42926419-42926467)
chr7 (8-54)||(1824200-1824246)
chr7 (8-54)||(4514858-4514904)
chr7 (6-55)||(816190-816239)
chr7 (1-54)||(14786635-14786688)
chr7 (6-55)||(15969876-15969925)
chr7 (5-54)||(20923958-20924007)
chr7 (7-52)||(32267438-32267483)
chr7 (5-54)||(38090353-38090402)
chr7 (5-53)||(27132722-27132770)
chr7 (8-55)||(2457761-2457808)
chr7 (5-56)||(27304960-27305011)
chr7 (8-54)||(36993913-36993959)
chr7 (8-54)||(39979624-39979670)
chr7 (8-54)||(40847435-40847481)
chr7 (6-47)||(5106740-5106781)
chr7 (7-56)||(30908943-30908992)
chr7 (5-54)||(38057722-38057771)
chr7 (7-55)||(10222629-10222677)
[»] chr2 (42 HSPs)
chr2 (1-55)||(41736254-41736308)
chr2 (1-55)||(44476374-44476428)
chr2 (1-54)||(12779682-12779735)
chr2 (1-54)||(20065074-20065127)
chr2 (1-54)||(37552309-37552362)
chr2 (1-56)||(15636733-15636788)
chr2 (1-56)||(21293709-21293764)
chr2 (1-55)||(22140363-22140417)
chr2 (1-55)||(27039907-27039961)
chr2 (1-54)||(7093650-7093703)
chr2 (1-54)||(13788055-13788108)
chr2 (1-54)||(32185914-32185967)
chr2 (1-54)||(43408511-43408564)
chr2 (1-53)||(28319580-28319632)
chr2 (1-47)||(1141618-1141664)
chr2 (1-55)||(18551252-18551306)
chr2 (1-47)||(32300533-32300579)
chr2 (1-54)||(28841342-28841395)
chr2 (1-54)||(44723014-44723067)
chr2 (1-53)||(23388379-23388431)
chr2 (6-54)||(32009040-32009088)
chr2 (7-54)||(23857958-23858005)
chr2 (1-56)||(37723990-37724045)
chr2 (5-54)||(8430382-8430431)
chr2 (1-54)||(14757121-14757174)
chr2 (1-49)||(38362276-38362324)
chr2 (8-55)||(41637707-41637754)
chr2 (5-55)||(22192265-22192315)
chr2 (1-51)||(28262446-28262496)
chr2 (1-54)||(13613093-13613146)
chr2 (5-54)||(26243321-26243370)
chr2 (5-54)||(36550921-36550970)
chr2 (1-48)||(12860235-12860282)
chr2 (5-55)||(16098916-16098966)
chr2 (8-54)||(29749403-29749449)
chr2 (5-55)||(40018888-40018938)
chr2 (6-55)||(26687689-26687738)
chr2 (1-37)||(9590552-9590588)
chr2 (1-56)||(9004306-9004361)
chr2 (8-55)||(30783427-30783474)
chr2 (8-54)||(27327705-27327751)
chr2 (5-55)||(37802378-37802428)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-55)||(22297-22351)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-55)||(202860-202914)
scaffold0007 (1-54)||(3828-3881)
scaffold0007 (1-54)||(274665-274718)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-54)||(5979-6032)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-54)||(9229-9282)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-54)||(14990-15043)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-54)||(19689-19742)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-54)||(10663-10716)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-54)||(12738-12791)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-54)||(39703-39756)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-54)||(17617-17670)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-54)||(219722-219775)
scaffold0009 (1-53)||(182616-182668)
scaffold0009 (1-54)||(215663-215716)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-54)||(84389-84442)
scaffold0001 (1-54)||(8110-8163)
scaffold0001 (1-54)||(21842-21895)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-53)||(7591-7643)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-51)||(6881-6931)
[»] scaffold0554 (1 HSPs)
scaffold0554 (1-54)||(9896-9949)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-54)||(26569-26622)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-54)||(44003-44056)
[»] scaffold0717 (1 HSPs)
scaffold0717 (6-54)||(918-966)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-51)||(74720-74770)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-55)||(173532-173585)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-50)||(84678-84727)
[»] scaffold0087 (1 HSPs)
scaffold0087 (5-56)||(37785-37836)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-51)||(7542-7592)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-54)||(440049-440102)
[»] scaffold0047 (1 HSPs)
scaffold0047 (8-55)||(58675-58722)
[»] scaffold0655 (1 HSPs)
scaffold0655 (8-54)||(3162-3208)
[»] scaffold0069 (1 HSPs)
scaffold0069 (8-54)||(10251-10297)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-54)||(74541-74587)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 84 - 281
Target Start/End: Complemental strand, 31396639 - 31396453
Alignment:
Q  84 caggatgttataccatttaaactatgagtgaatatcaaatacatatgcagacacatgcaatacagatgatgcatatgcaatgcaagaatgatgcagatac 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396639 caggatgttataccatttaaactatgagtgaatatcaaatacatatgcagacacatgcaatacagatgatgcatatgcaatgcaagaatgatgcagatac 31396540  T
Q  184 aatgctagaatatacaagcataatctaattgtaaaaagtattgttcacaatacacatttataagtagacactattgtattgttcacacagcacttgtt 281  Q
    ||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396539 aatgctagaatatacaagca-----------taaaaagtattgttcacaatacacatttataagtagacactattgtattgttcacacagcacttgtt 31396453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27449170 - 27449225
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449170 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 27449225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48404942 - 48405001
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatggaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48404942 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgaaggaa 48405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43329816 - 43329763
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43329816 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26098895 - 26098950
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26098895 tttcattttttccatcactaatttccctcgctaattttgctttttctagtagtgat 26098950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5261019 - 5261073
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5261019 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtga 5261073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19223531 - 19223585
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19223531 tttcattttttccgtcaccaatttccctcgctaattttgctttttctagtagtga 19223585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29236126 - 29236180
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29236126 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtga 29236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8110421 - 8110474
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8110421 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 8110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9652660 - 9652713
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9652660 tttcattttttccgtcactaatttccctcgccaattttgctttttctagtagtg 9652713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11219220 - 11219273
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11219220 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13921407 - 13921460
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13921407 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 13921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18091600 - 18091547
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18091600 tttcattttttccgtcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19269917 - 19269864
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19269917 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21816803 - 21816856
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21816803 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25882652 - 25882705
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25882652 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 25882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26390687 - 26390634
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26390687 tttcattttttccgtcactaatttctctcgctaattttgctttttctagtagtg 26390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11915840 - 11915892
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11915840 tttcatattttccgtcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8428253 - 8428308
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  8428253 tttcattttttccgtcactaatttccctcgctaattttattttttctagtagtgat 8428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11007736 - 11007681
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11007736 tttcattttttccgtcactaatttcccttactaattttgctttttctagtagtgat 11007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29956454 - 29956509
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29956454 tttcattttttccatcactaatttccctcgctaattttactttttctagtagtgat 29956509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30005609 - 30005664
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  30005609 tttcattttttccatcactaatttccctcgctaattttactttttctagtagtgat 30005664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7623584 - 7623530
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7623584 tttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtga 7623530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10941718 - 10941660
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatgga 59  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  10941718 tttcattttttccgtcactaatttcccttactaattttgctttttctagtagtggtgga 10941660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18380106 - 18380160
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18380106 tttcattttttccgtcactgatttccctcgctaattttactttttctagtagtga 18380160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1311012 - 1310959
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1311012 tttcattttttccgtcactaattttccttgctaattttgctttttctagtagtg 1310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8546327 - 8546380
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  8546327 tttcattttttccgtcactaattttcctcgctaattttgctttttctggtagtg 8546380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13905091 - 13905038
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13905091 tttcattttttccgtcactaatttcgctctctaattttgctttttctagtagtg 13905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17762724 - 17762777
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  17762724 tttcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 18104579 - 18104530
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18104579 attttttccgtcaataatttccctcgctaattttgctttttctagtagtg 18104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19064044 - 19064097
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  19064044 tttcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29704085 - 29704041
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgcttttt 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29704085 tttcattttttccgtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 1745535 - 1745488
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1745535 tttttccgtcactaatttccctcgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 3461359 - 3461308
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  3461359 attttttctgtcactaatttccttcgctaattttgctttttctagtagtgat 3461308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6088281 - 6088226
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  6088281 tttcattttttccgtcactaatttcccttacttattttgctttttctagtagtgat 6088226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4393403 - 4393357
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  4393403 tttcattttttccgtcactaatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18539886 - 18539932
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  18539886 tttcattttttccgtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 21020151 - 21020201
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  21020151 attttttccgtcactaatttccctccctaattttgcttttcctagtagtga 21020201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 5565808 - 5565857
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  5565808 attttttccgtcactaatttccctccctgattttgctttttctagtagtg 5565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11837267 - 11837214
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  11837267 tttcattttttccatcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 20761999 - 20761950
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  20761999 attttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29451176 - 29451232
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttg-ctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  29451176 tttcattttttccgtcactaatttccctcgttaattttgtttttttctagtagtgat 29451232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23773559 - 23773613
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| |||||||||||||||||||  ||||||||| |||||||||||||||    
T  23773559 tttcatttcttccgtcactaatttcccttactaattttgttttttctagtagtga 23773613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6447295 - 6447246
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  6447295 attttttccatcactaatttccctccctaattttgcttttcctagtagtg 6447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11085395 - 11085342
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||    
T  11085395 tttcattttttccgttactgatttctctcgctaattttactttttctagtagtg 11085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  11 tccgtcactaatttccctcgctaattttgctttttctagtag 52  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21490087 - 21490034
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||    
T  21490087 tttcattttttccgtcattgatttccctcactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 46012777 - 46012728
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||    
T  46012777 attttttccgtcactaattttcctccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 10772101 - 10772053
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  10772101 ttttttctgtcactaatttccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 10803808 - 10803856
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  10803808 ttttttccgtcattaatttccctccctaatttggctttttctagtagtg 10803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 19610427 - 19610475
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  19610427 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtgat 19610475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26963302 - 26963254
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctag 49  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  26963302 tttcattttttacgtcactaatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27969001 - 27969049
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||    
T  27969001 atttgttccgtcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 8543556 - 8543603
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  8543556 tttttccatcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 31250174 - 31250225
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||| | |||| |||||||||| |||||||||||||||    
T  31250174 attttttccgtcactaatcttcctccctaattttgcattttctagtagtgat 31250225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15064038 - 15063992
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  15064038 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 15063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 15501599 - 15501549
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  15501599 ttttttccgtcattaatttttctcgctaattttactttttctagtagtgat 15501549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30219427 - 30219473
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  30219427 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 30219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 36543835 - 36543885
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  36543835 attttttccatcactaattttcctccctaatttttctttttctagtagtga 36543885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 36564488 - 36564438
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  36564488 attttttccatcactaattttcctccctaatttttctttttctagtagtga 36564438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 47263314 - 47263264
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| ||||| ||||||| ||| ||||||||||||||||||||||||    
T  47263314 attttttctgtcaccaatttccttcgttaattttgctttttctagtagtga 47263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 17269653 - 17269604
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||  |||||||| |||||||||||||||||||||||||||    
T  17269653 attttttccatcgttaatttccatcgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 21088836 - 21088885
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  21088836 attttttccgtcactaatttccctccctaactttgcttttcttagtagtg 21088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28859673 - 28859710
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaatttt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28859673 tttcattttttccgtcactaattttcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 46942573 - 46942622
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  46942573 attttttctgtcactaatttccttccctaattttgatttttctagtagtg 46942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 37283612 - 37283659
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||| |||||||||||||| ||| ||||||    
T  37283612 ttttccgtcacaaatttccctccctaattttgcttttcctaatagtga 37283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 1628301 - 1628347
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    ||||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  1628301 attttttccatcattaatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 5744505 - 5744551
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| ||||| |||| |||||||||||||| |||||||||    
T  5744505 ttttccgtcacaaattttcctccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 5781464 - 5781510
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| ||||| |||| |||||||||||||| |||||||||    
T  5781464 ttttccgtcacaaattttcctccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 16299950 - 16299996
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||| ||| |||||||||||||| |||||||||    
T  16299950 ttttccgtcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 26830489 - 26830439
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||| |||||| |||| |||||||| ||||||||| |||||||    
T  26830489 ttttttccgtcattaattttcctccctaatttttctttttctaatagtgat 26830439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 28390059 - 28390105
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||||    
T  28390059 attttttccgtcactaattttcctctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 23217257 - 23217208
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||| ||||||||||| |||||||| |||||| ||||||||    
T  23217257 attttttccctcattaatttccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 40287527 - 40287486
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctag 49  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  40287527 ttttccgtctataatttcccttgctaattttgctttttctag 40287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 20088504 - 20088540
Alignment:
Q  18 ctaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||||| |||||||||||||||    
T  20088504 ctaatttccctctctaattttactttttctagtagtg 20088540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 27182698 - 27182658
Alignment:
Q  14 gtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  27182698 gtcactaatttccctccctaattttgtttttcctagtagtg 27182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7111999 - 7111943
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7111999 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 7111943  T

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Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19839263 - 19839317
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19839263 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 19839317  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4586811 - 4586758
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4586811 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 4586758  T

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Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22168352 - 22168405
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22168352 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 22168405  T

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Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9238678 - 9238622
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9238678 tttcattttttccgtcactaatttccctcgctaattttgctttttttagtagtgatg 9238622  T

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Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9670532 - 9670478
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9670532 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtga 9670478  T

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Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38645834 - 38645888
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38645834 tttcattttttccgtcaataatttccctcgctaattttgctttttctagtagtga 38645888  T

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Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45091345 - 45091399
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45091345 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtga 45091399  T

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Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5473933 - 5473986
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5473933 tttcatttttcccgtcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

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Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13564968 - 13564915
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13564968 tttcattatttccgtcactaatttccctcgctaattttgctttttctagtagtg 13564915  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30269041 - 30268988
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30269041 tttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtg 30268988  T

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Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30283148 - 30283201
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30283148 tttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtg 30283201  T

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Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38619931 - 38619984
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38619931 tttcattttttccgtcattaatttccctcgctaattttgctttttctagtagtg 38619984  T

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Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44783567 - 44783620
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44783567 tttcattttttccgtcactaatttccctcgctagttttgctttttctagtagtg 44783620  T

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Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4627131 - 4627079
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4627131 tttcattttttccgtcattaatttccctcgctaattttgctttttctagtagt 4627079  T

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Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 27040073 - 27040025
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27040073 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

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Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 55309260 - 55309212
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55309260 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 55309212  T

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Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54539370 - 54539424
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  54539370 tttcattttttccgtcactaattttccttgctaattttgctttttctagtagtga 54539424  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32175786 - 32175737
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32175786 attttttccgtcactaatttccctcgttaattttgctttttctagtagtg 32175737  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45532632 - 45532579
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  45532632 tttcattttttccgtcactaatttccctcgttaattttgctttttctaatagtg 45532579  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29625409 - 29625465
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 57  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  29625409 tttcattttttccgtcattaatttccctcgctaattttgctttttatattagtgatg 29625465  T

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Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2275731 - 2275677
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaa-ttttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2275731 tttcattttttccgtcactaatttccctcgctaatttttgttttttctagtagtg 2275677  T

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Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 13028866 - 13028816
Alignment:
Q  4 cattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  13028866 cattttttccgtcactaattttcctcgctaagtttgctttttctagtagtg 13028816  T

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Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18051923 - 18051969
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  18051923 tttcattttttccgtcactaatttccctcactaattttgctttttct 18051969  T

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Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42055481 - 42055535
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  42055481 tttcatttttttcgtcacagatttccctcgctaattttgctttttctagtagtga 42055535  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 18714990 - 18715039
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18714990 attttttccgtcacttatttccctcgctaatattgctttttctagtagtg 18715039  T

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Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19680477 - 19680424
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  19680477 tttcattttttccgtcactaaattccctcactaatttttctttttctagtagtg 19680424  T

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Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25026641 - 25026694
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  25026641 tttcattttttccgtcactaatttccctcactaattttactttttctaatagtg 25026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 30420082 - 30420033
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  30420082 attttttccgtcactaattttcctccctaattttgctttttctagtagtg 30420033  T

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Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 46286278 - 46286229
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  46286278 attttttccgtcactaatttccgtcactaattttgctttttctagtagtg 46286229  T

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Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37378676 - 37378628
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctag 49  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  37378676 tttcattttttccgtcaataattttcctcgctaattttgctttttctag 37378628  T

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Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9239334 - 9239279
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||    
T  9239334 tttcattttttccgtcactaatttccctcgttaattttactctttcttgtagtgat 9239279  T

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Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36689761 - 36689816
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||    
T  36689761 tttcattttttccatcactaatttccctcgttaattttgttttttcttgtagtgat 36689816  T

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Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 8878971 - 8879021
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||    
T  8878971 attttttccgtcactaatttccctctctgattttgctttttcttgtagtga 8879021  T

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Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30568052 - 30568006
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  30568052 tttcattttttccgtcactaatttcgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 1638535 - 1638584
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  1638535 attttttccgtcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12072046 - 12072099
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||| |||||    
T  12072046 tttcattttttcgatcactaatttcgctcgctaattttgctttttctaatagtg 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 22128361 - 22128312
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  22128361 attttttccgtcactaatttccctccctgattttgttttttctagtagtg 22128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 24682376 - 24682328
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  24682376 attttttccgtcattaatttccctccctaatttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 12106070 - 12106121
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| |||||||    
T  12106070 attttttccatcaataatttccctcgctaattttactttttctaatagtgat 12106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 33914150 - 33914197
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  33914150 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtga 33914197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 4606878 - 4606829
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||| ||||||||||||||||||| |||||||| ||||| |||||||||    
T  4606878 attttgtccgtcactaatttccctccctaattttacttttcctagtagtg 4606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9913346 - 9913395
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  9913346 attttttccgtcactaattttcctccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 16915457 - 16915506
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| |||||||||| |||| || |||||||||||||||||||||    
T  16915457 attttttccatcactaattttcctccctgattttgctttttctagtagtg 16915506  T

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Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 30508075 - 30508124
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  30508075 atttttttcgtcacagattttcctcgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 9058998 - 9058951
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||| ||||| |||||||||| |||||||||||||| ||||||||||    
T  9058998 ttttcagtcacaaatttccctccctaattttgcttttcctagtagtga 9058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 25225188 - 25225234
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||| | ||||||||| |||||||| |||||||||||||||    
T  25225188 ttttccgtcattgatttccctccctaatttttctttttctagtagtg 25225234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 38223598 - 38223643
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagt 50  Q
    |||||||||||||||||| |||||| |||||||| | |||||||||    
T  38223598 attttttccgtcactaatctccctccctaattttacattttctagt 38223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 5399700 - 5399748
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||| ||||| |||| |||| ||||||||| |||||||||||    
T  5399700 ttttccgtcacaaattttcctccctaagtttgcttttcctagtagtgat 5399748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 29238511 - 29238559
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||| ||||||||||| ||| ||||| |||| ||||||||    
T  29238511 attttttccgtcaataatttccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9110028 - 9109972
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9110028 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 9109972  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8941047 - 8940993
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941047 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 8940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28229508 - 28229455
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28229508 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 28229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46790086 - 46790139
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46790086 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 46790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50092351 - 50092292
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatggaa 60  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  50092351 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtgacggaa 50092292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12720899 - 12720949
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12720899 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 12720949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20408213 - 20408159
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20408213 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtga 20408159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6412106 - 6412053
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6412106 tttcattttttccgttactaatttccctcgctaattttgctttttctagtagtg 6412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6459303 - 6459356
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6459303 tttcattttttccgtcactaatttccctcgctaatttcgctttttctagtagtg 6459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45839378 - 45839431
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45839378 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46339498 - 46339445
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46339498 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 46339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51973510 - 51973563
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51973510 tttcattttttccgttactaatttccctcgctaattttgctttttctagtagtg 51973563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 12369999 - 12369951
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12369999 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46786011 - 46785964
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttcta 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46786011 tttcattttttccgtcactaatttccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 29549508 - 29549558
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29549508 atttttttcgtcactaatttccctcgctaattttgctttttctagtagtga 29549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4340493 - 4340546
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  4340493 tttcattttttccgtcactaatttcccttgctaattttgctttttctaatagtg 4340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9177186 - 9177239
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9177186 tttcattttttccgttactaatttccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17200063 - 17200010
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17200063 tttcattttttccgtcactgatttccctcgctaattttgttttttctagtagtg 17200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19865330 - 19865383
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  19865330 tttcattttttccgtcactaattttcctcgctaattttactttttctagtagtg 19865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22603634 - 22603687
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22603634 tttcattttttccatcactaatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41120790 - 41120737
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  41120790 tttcattttttccatcactaatttccctcgctaattttgctttttctattagtg 41120737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7181603 - 7181555
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7181603 ttttttccgtcactaatttcccttgctaattttgctttttctagtagtg 7181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22158888 - 22158943
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  22158888 tttcattttttctgtcactaatttccctcgctaattttactttttctggtagtgat 22158943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 25788045 - 25787998
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25788045 ttttttccgtcactaattttcctcgctaattttgctttttctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9985376 - 9985326
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9985376 attttttccgtcactaatttcccttgctaattttgttttttctagtagtga 9985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12161900 - 12161954
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  12161900 tttcattttttccgtcaataattttcctcgctaattttactttttctagtagtga 12161954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18890602 - 18890556
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18890602 tttcattttttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 48522608 - 48522658
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  48522608 attttttctgtcactaattttcctcgctaattttgctttttctagtagtga 48522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15243171 - 15243224
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  15243171 tttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtg 15243224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23457983 - 23458036
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  23457983 tttcattttttccgtcaataattttcctcgctaattttactttttctagtagtg 23458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 41752523 - 41752572
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41752523 attttttccgtcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 52183768 - 52183817
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  52183768 attttttccgtcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 17661140 - 17661191
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  17661140 attttttccgtcactaatttccgtcgttaattttgctttttctaatagtgat 17661191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 20290368 - 20290321
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  20290368 tttttccgtcactaatttccctcgctaattttactttttctagcagtg 20290321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50845376 - 50845330
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  50845376 ttttccgtcacaaatttccctccctaattttgctttttctagtagtg 50845330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 18894949 - 18894900
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  18894949 atttttttcgtcactaattttcctcgctaattttgcttttcctagtagtg 18894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 38531219 - 38531170
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  38531219 attttttccgtcacttatttccctccctaattttactttttctagtagtg 38531170  T

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Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 46865333 - 46865382
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  46865333 attttttccgtcactaatttccctccctagtttttctttttctagtagtg 46865382  T

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Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 9259231 - 9259184
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  9259231 ttttttccgtcactaattttcctcgttaattttgttttttctagtagt 9259184  T

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Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 30928427 - 30928388
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  30928427 attttttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9464189 - 9464235
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||    
T  9464189 tttcattttttccgtcactaatttccgtcactaattttactttttct 9464235  T

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Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12989942 - 12989992
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||| |||||| ||| ||||||||||||||| |||||||||    
T  12989942 attttttccgtcaccaatttctctctctaattttgctttttttagtagtga 12989992  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 14760960 - 14761006
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  14760960 ttttccgtcacaaatttccctctttaattttgctttttctagtagtg 14761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 39749024 - 39749074
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||| |||  ||||||||||||| |||||||||||    
T  39749024 ttttttccgtcactaatttcgctccttaattttgcttttcctagtagtgat 39749074  T

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Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 16913626 - 16913581
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagt 50  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||    
T  16913626 attttttccgtcactaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19081818 - 19081867
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  19081818 attttttccatcactaatttccctctctaattttactttttttagtagtg 19081867  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19129706 - 19129755
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  19129706 attttttccatcactaatttccctctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 27253904 - 27253855
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||| |||| |||||||| |||||||||||||||    
T  27253904 attttttccgtcattaattttcctccctaatttttctttttctagtagtg 27253855  T

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Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20581001 - 20581049
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  20581001 ttttttccatcactaatttccctctctaattttactttttttagtagtg 20581049  T

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Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 13102409 - 13102456
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||||    
T  13102409 ttttccgtcacaaatttccctccttaattttgcttttcctagtagtga 13102456  T

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Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 18787960 - 18787913
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||| |||||||||||||| || |||||||||||||||| |||||||    
T  18787960 ttttttcgtcactaatttccatccctaattttgctttttcaagtagtg 18787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 13195676 - 13195722
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||| |||||||| |||||| |||||||||| |||||||||||||    
T  13195676 ttttccatcactaatctccctccctaattttgcattttctagtagtg 13195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 13308869 - 13308819
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| | |||||||||||||| ||||||||| |||| ||||||||||    
T  13308869 attttttcggacactaatttccctctctaattttgtttttcctagtagtga 13308819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 12806884 - 12806835
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||| |||||||||||||||| ||||| |||||||| ||| ||||||    
T  12806884 ttttttctgtcactaatttccctccctaatattgcttttcctaatagtga 12806835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 41063287 - 41063336
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||   ||||||| |||||||||||||||    
T  41063287 attttttccgtcactaattttccttcttaattttactttttctagtagtg 41063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41071888 - 41071852
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattt 37  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  41071888 tttcattttctccgtcactaatttccctcgcaaattt 41071852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8555357 - 8555302
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8555357 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 8555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27910817 - 27910762
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910817 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 27910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27957236 - 27957181
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27957236 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 27957181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24193249 - 24193195
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24193249 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 24193195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25274681 - 25274735
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25274681 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 25274735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4331062 - 4331115
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4331062 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19240951 - 19241004
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240951 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 19241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19314135 - 19314188
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19314135 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 19314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19488114 - 19488061
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19488114 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 19488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24576077 - 24576024
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24576077 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17810382 - 17810437
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17810382 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgat 17810437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32247993 - 32248048
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32247993 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtgat 32248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16061992 - 16061938
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16061992 tttcattttttccgtcactaatttccctcgctaattttactttttctagtagtga 16061938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3823217 - 3823270
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3823217 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4647808 - 4647755
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4647808 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 4647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25655911 - 25655858
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25655911 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27869322 - 27869375
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27869322 tttcattttttccatcactaatttccctcgctaattttgctttttctagtagtg 27869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33652651 - 33652704
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33652651 tttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtg 33652704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 8824913 - 8824964
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8824913 attttttccatcactaatttccctcgctaattttgctttttctagtagtgat 8824964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9915094 - 9915043
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtag 52  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9915094 tttcattttttccgtcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 11938834 - 11938881
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11938834 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 30467001 - 30466954
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30467001 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 30466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22939397 - 22939451
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22939397 tttcattttttccgtcactaatttccttcactaattttgctttttctagtagtga 22939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13060984 - 13060931
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  13060984 tttcattttttccgtcactaatttacctcgctaattttgcttttgctagtagtg 13060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18010113 - 18010060
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18010113 tttcattttttccgtcactaatttctctcgctaattttgctttttctggtagtg 18010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19256300 - 19256349
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19256300 attttttccgtcactaatttccctcgttaattttgctttttctagtagtg 19256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21350562 - 21350615
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  21350562 tttcattttttccgtcactaatttcccttgcttattttgctttttctagtagtg 21350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23752339 - 23752286
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23752339 tttcattttttccgtcactaatatccctcgctaattttgctttttctaatagtg 23752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25000484 - 25000431
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  25000484 tttcattttttccgtcactaatttccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30688020 - 30688073
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  30688020 tttcattttttcggtcactgatttccctcgctaattttgctttttctagtagtg 30688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43431612 - 43431559
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  43431612 tttcattttttccgtcactaatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 29345159 - 29345210
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  29345159 attttttccgtcactaatttccctccctaatttttctttttctagtagtgat 29345210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29351007 - 29351062
Alignment:
Q  1 tttcattttttcc-gtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29351007 tttcattttttctagtcactaatttccctcgctaattttgctttttctagtagtga 29351062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6817138 - 6817192
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  6817138 tttcattttttccgtcactgattttccttgctaattttgctttttctagtagtga 6817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14304313 - 14304359
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  14304313 tttcattttttccatcactaatttccctcgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24636736 - 24636790
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgct-ttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  24636736 tttcattttttccgtcactaatttccctcgttaattttgctattttctagtagtg 24636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25273380 - 25273327
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25273380 tttcattttttc-gtcactaatttccctcgttaattttgctttttctagtagtga 25273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9631492 - 9631541
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  9631492 attttttccgtcactaattttccttgctaattttgctttttctagtagtg 9631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 15251689 - 15251738
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  15251689 attttttccgtcactaatttccctccctaattttgctttttcaagtagtg 15251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21219293 - 21219240
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  21219293 tttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32961743 - 32961796
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  32961743 tttcattttttctgtcactgatttccctcgctaattttgctttttttagtagtg 32961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33413029 - 33412977
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  33413029 tttcattttttccgttactaatttccctcgctaatttt-ctttttctagtagtg 33412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42700710 - 42700657
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  42700710 tttcattttttccgtcactgattttcctcgctaattttactttttctagtagtg 42700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 17824662 - 17824614
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  17824662 ttttccgtcacaaatttccctctctaattttgctttttctagtagtgat 17824614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31399561 - 31399505
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatg 57  Q
    ||||||||||| | |||||||||||||||| |||||||| |||||||||||||||||    
T  31399561 tttcatttttttcatcactaatttccctcgttaattttgttttttctagtagtgatg 31399505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40289473 - 40289421
Alignment:
Q  2 ttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  40289473 ttcattttttccgtcactaattttcctcgctaattttaatttttctagtagtg 40289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10917918 - 10917964
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  10917918 ttttccgtcacaaatttccctccctaattttgctttttctagtagtg 10917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 5670219 - 5670167
Alignment:
Q  4 cattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||| ||||||    
T  5670219 cattttttccgtcactaatttccctcgttgattttgttttttctagcagtgat 5670167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6084295 - 6084246
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||  ||| |||||||||||||||||| |||||    
T  6084295 attttttccgtcactaatttatctccctaattttgctttttctattagtg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6816432 - 6816383
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||||||||    
T  6816432 atttttttcatcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 17003350 - 17003399
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||  ||||||||| |||| ||||||||||||||||||||||||    
T  17003350 attttttcccacactaattttcctccctaattttgctttttctagtagtg 17003399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 37992190 - 37992234
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtag 52  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||    
T  37992190 ttttccgtcactaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 24479860 - 24479813
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  24479860 tttttctgtcactaatttccctctctaattatgctttttttagtagtg 24479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 17103911 - 17103865
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||| ||| ||||||||| ||||||||||||||    
T  17103911 ttttccgtcacaaatttctctctctaattttgttttttctagtagtg 17103865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 8789931 - 8789979
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||| ||||| ||||| |||| |||||||||||||| |||||||||||    
T  8789931 ttttcagtcacaaattttcctccctaattttgcttttcctagtagtgat 8789979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6605549 - 6605494
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6605549 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 6605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6598550 - 6598604
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6598550 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 6598604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9893049 - 9893103
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9893049 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 9893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26224514 - 26224568
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26224514 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 26224568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15448471 - 15448524
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15448471 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24661062 - 24661009
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661062 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 24661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28364997 - 28365050
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364997 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 28365050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30834013 - 30833960
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30834013 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16250855 - 16250800
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16250855 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtgat 16250800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20182231 - 20182286
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20182231 tttcattttttccgtcactaatttccctcgctaattttactttttctagtagtgat 20182286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22153760 - 22153705
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22153760 tttcattttttccgtcactaatttccctcgctaattttactttttctagtagtgat 22153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 495680 - 495626
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  495680 tttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtga 495626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1939295 - 1939242
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1939295 tttcattttttcggtcactaatttccctcgctaattttgctttttctagtagtg 1939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15364511 - 15364458
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15364511 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 15364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15961460 - 15961407
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15961460 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 15961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22579402 - 22579349
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22579402 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 22579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 5360499 - 5360547
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5360499 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21141025 - 21141075
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21141025 tttcattttttccgtcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25398088 - 25398138
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25398088 tttcattttttccgtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 27796885 - 27796835
Alignment:
Q  3 tcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27796885 tcatttttttcgtcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2669395 - 2669448
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  2669395 tttcatttttttcgtcactaatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5250225 - 5250278
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  5250225 tttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 5250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11049804 - 11049751
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11049804 tttcattttttccgtcactaatttcccttgctaattttgttttttctagtagtg 11049751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12160900 - 12160847
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  12160900 tttcattttttacgtcactaatttccctcgctaattttactttttctagtagtg 12160847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12200780 - 12200833
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  12200780 tttcattttttccgtcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15509242 - 15509295
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  15509242 tttcattttttccgtcactaatttccctcgctaatttttctttttctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 9885333 - 9885384
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9885333 attttttccgtcactaatttccctccctgattttgctttttctagtagtgat 9885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 10458851 - 10458902
Alignment:
Q  2 ttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  10458851 ttcattttttccgtcactaatttccctcactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 21990222 - 21990175
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21990222 tttttccgtcattaatttccctcgctaattttgctttttctagtagtg 21990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6978363 - 6978416
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  6978363 tttcattttttccgtaactaatttccctcgctaattttgcttttcctaatagtg 6978416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18492455 - 18492508
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  18492455 tttcattttttccgtcactaatttgcatcgctaattttgctttttctagcagtg 18492508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 28668190 - 28668239
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  28668190 attttttccgtcactgatttccctcgctaattttactttttctagtagtg 28668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33250761 - 33250708
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  33250761 tttcattttttccgtcactaatttccctcgttaattttgtcttttctagtagtg 33250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12499302 - 12499358
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttg-ctttttctagtagtgat 56  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  12499302 tttcattttttccgtcactactttccctcgctaattttgtttttttctagtagtgat 12499358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12506631 - 12506687
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttg-ctttttctagtagtgat 56  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  12506631 tttcattttttccgtcactactttccctcgctaattttgtttttttctagtagtgat 12506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12509599 - 12509543
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttg-ctttttctagtagtgat 56  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  12509599 tttcattttttccgtcactactttccctcgctaattttgtttttttctagtagtgat 12509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 2992705 - 2992756
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  2992705 attttttccatcactaatttccctcgctaattatgcttttcctagtagtgat 2992756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5192242 - 5192195
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttcta 48  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  5192242 tttcattttttccttcactaattttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17919622 - 17919676
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||    
T  17919622 tttcattttttccgtcattgatttctctcgctaattttgttttttctagtagtga 17919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 8844217 - 8844168
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||    
T  8844217 attttttccgtcactaatttccctccctgatttttctttttctagtagtg 8844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 12157425 - 12157380
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagt 50  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  12157425 attttttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 14036706 - 14036757
Alignment:
Q  9 tttccgtcactaatttccctcgctaattttgctttttctagtagtgatggaa 60  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||| |||||    
T  14036706 tttctgtcactaatttccctcgctaattttcctttttttagtagtgctggaa 14036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 33191180 - 33191219
Alignment:
Q  15 tcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtg 33191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 12351635 - 12351585
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  12351635 attttttccgtcactaatttccctccttaattatactttttctagtagtga 12351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 12951801 - 12951847
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  12951801 ttttccgtcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13251432 - 13251378
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||| ||||| ||||||||||||| ||| |||||||||||||||||| ||||||    
T  13251432 tttcacttttttcgtcactaatttctctctctaattttgctttttctattagtga 13251378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 14886651 - 14886701
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| |||||||    
T  14886651 attttttctgtcactaattttcctccctaattttgctttttctggtagtga 14886701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 18033571 - 18033525
Alignment:
Q  9 tttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||    
T  18033571 tttccgtcacaaatttccctccctaattttgcttttcctagtagtga 18033525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 18048878 - 18048928
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  18048878 attttttccgtcactaattttcctctctaattttgtttttcctagtagtga 18048928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22083931 - 22083977
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  22083931 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 22083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26939673 - 26939726
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||  ||||||||||||||||  ||||||| |||||||||||||||    
T  26939673 tttcattttttttgtcactaatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 11350272 - 11350320
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||| |||||||||| |||||||||||||| |||||| ||||    
T  11350272 ttttccgtcacaaatttccctccctaattttgcttttcctagtaatgat 11350320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 11077742 - 11077785
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||    
T  11077742 ttttccgtcacaaatttccctccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 20692860 - 20692817
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttcta 48  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||    
T  20692860 attttttccgtcactaattttcctcgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 9060180 - 9060222
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||||||||||||||||| |||  ||||||||||||||||    
T  9060180 attttttccgtcactaatttcgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11530318 - 11530364
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| ||| |||||    
T  11530318 ttttccgtcacaaatttccctccctaattttgcttttcctaatagtg 11530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1954970 - 1955015
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagt 50  Q
    ||||||||||||||| ||||||||  |||||||||||||| |||||    
T  1954970 attttttccgtcactcatttcccttcctaattttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 6065527 - 6065576
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||| |||||    
T  6065527 attttttccgtcattaattttcctccctaattttgcttttcctaatagtg 6065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 9878562 - 9878513
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||| ||||||| |||||||  ||||||||||||||||| |||||||    
T  9878562 tttttccatcactaaattccctccataattttgctttttctattagtgat 9878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38837724 - 38837669
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38837724 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 38837669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12045813 - 12045866
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12045813 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36196480 - 36196533
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36196480 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4125241 - 4125186
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4125241 tttcattttttccgtcactaatttccctcgctaattttactttttctagtagtgat 4125186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8108913 - 8108858
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8108913 tttcattttttccgtcactaatttccctctctaattttgctttttctagtagtgat 8108858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 618380 - 618433
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  618380 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 746921 - 746868
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  746921 tttcattttttccgtcactaatttccctcgctaattttgctttttcttgtagtg 746868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7888883 - 7888936
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7888883 tttcattttttccgtcaataatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 16121888 - 16121839
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16121888 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 16121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16631927 - 16631874
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16631927 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26708638 - 26708584
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26708638 tttcattttttccggcactaatttccctcgctaattttgcattttctagtagtga 26708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26978372 - 26978318
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26978372 tttcattttttccggcactaatttccctcgctaattttgcattttctagtagtga 26978318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2472767 - 2472714
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2472767 tttcattttttccgtcactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10494823 - 10494876
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  10494823 tttcattttttccgtcactaatttccctcgctacatttgctttttctagtagtg 10494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12328279 - 12328226
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12328279 tttcattttttccgttactaatttccctcactaattttgctttttctagtagtg 12328226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13974131 - 13974078
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13974131 tttcatttttttcgtcgctaatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15061059 - 15061112
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  15061059 tttcattttttcggtcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17039684 - 17039631
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  17039684 tttcattttttccgtcactaattttcctcactaattttgctttttctagtagtg 17039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28265528 - 28265475
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  28265528 tttcattttttccgtcactaattttcctcgctaattttactttttctagtagtg 28265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 35620393 - 35620344
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35620393 attttttccgtcactaatttccctcgctaattttgctttttctaatagtg 35620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36716253 - 36716200
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36716253 tttcattttttccatcactaatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40484130 - 40484183
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  40484130 tttcattatttccgtcactaatttccctcgctaatttttctttttctagtagtg 40484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 5982737 - 5982785
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5982737 ttttttccgtcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7003778 - 7003730
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7003778 ttttttccgtcactaatttccctcgctaattttgttttttctagtagtg 7003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17772021 - 17771969
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17772021 tttcattttttccgtcactaatttccctcgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23975721 - 23975765
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgcttttt 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23975721 tttcattttttccgtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36831943 - 36831888
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  36831943 tttcatttttttcgtccctaatttccctcactaattttgctttttctagtagtgat 36831888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25652636 - 25652582
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  25652636 tttcattttttctgtcactgatttccctcgctaattttgctttttctaatagtga 25652582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8886904 - 8886851
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  8886904 tttcatttttttcgtcacaaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24138894 - 24138841
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  24138894 tttcattttttccgtcaccaattttcctcgctaattttgctttttctaatagtg 24138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 23409072 - 23409120
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  23409072 ttttttccgtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  10 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 20187990 - 20187939
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  20187990 attttttccgtcactaatttccttcgctaattttgcttttgctaatagtgat 20187939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13620176 - 13620127
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||    
T  13620176 attttttccgtcactaatttccctccctgatttttctttttctagtagtg 13620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17986815 - 17986868
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  17986815 tttcattttttccgtcactaatttctctcactaattttactttttctagcagtg 17986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 19891025 - 19890986
Alignment:
Q  15 tcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtg 19890986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 25397834 - 25397788
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  25397834 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 25397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33818607 - 33818561
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||    
T  33818607 ttttccgtcacaaatttccctccccaattttgctttttctagtagtg 33818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 10420301 - 10420252
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  10420301 attttttccgtcactaatttccctctctaattttgatttctttagtagtg 10420252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  9 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 27428061 - 27428011
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||| ||||||||||||||||| |||||||| |||||  |||||||||    
T  27428061 atttttttcgtcactaatttccctccctaatttttcttttattagtagtga 27428011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 35778231 - 35778277
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    ||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  35778231 attttttccatcactaatttccctcccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 17036461 - 17036412
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||| ||||||||||||| || ||| |||||||||| |||||||||||||    
T  17036461 atttcttccgtcactaatctcgctccctaattttgcattttctagtagtg 17036412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 20959598 - 20959647
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| | |||| |||| |||||||| |||||||||||||||    
T  20959598 attttttccgtcagtgattttcctccctaattttactttttctagtagtg 20959647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 23974625 - 23974576
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||  |||||||| ||||| |||||||||    
T  23974625 attttttccgtcactaattttccttcctaatttttcttttcctagtagtg 23974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 25673278 - 25673229
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| |||| ||||||||  |||| |||||||||    
T  25673278 attttttccgtcactaattttcctccctaatttttattttcctagtagtg 25673229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 33735022 - 33734974
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||| ||| |||||| |||| |||||||||||||| ||||||||    
T  33735022 attttttccctcattaattttcctccctaattttgcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3872240 - 3872186
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3872240 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 3872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18217915 - 18217969
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18217915 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 18217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22486480 - 22486534
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22486480 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 22486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23539318 - 23539372
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23539318 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 23539372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3904531 - 3904478
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3904531 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 3904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7733365 - 7733310
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7733365 tttcattttttccgtcactaatttccctcgctaatttcgctttttctagtagtgat 7733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21917387 - 21917332
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21917387 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtgat 21917332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27806104 - 27806159
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27806104 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgat 27806159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31425564 - 31425509
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31425564 tttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgat 31425509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6849264 - 6849210
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6849264 tttcattttctccgtcactaatttccctcgctaattttgctttttctagtagtga 6849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23232125 - 23232179
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23232125 tttcattttttccgtcactaatttccctctctaattttgctttttctagtagtga 23232179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23750789 - 23750735
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23750789 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtga 23750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1842980 - 1843033
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1842980 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 1843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9698591 - 9698538
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9698591 tttcattatttccgtcactaatttccctcgctaattttgctttttctagtagtg 9698538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11036593 - 11036646
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11036593 tttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 11036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23699878 - 23699825
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23699878 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28800964 - 28801017
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28800964 tttcattttttctgtcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2093415 - 2093360
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  2093415 tttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtgat 2093360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 1907445 - 1907495
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1907445 attttttccgtcactaatttccctcgctaattttgcttttcctagtagtga 1907495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21623107 - 21623160
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21623107 tttcattttttccgtcactaatttccctcgct-attttgctttttctagtagtga 21623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20174106 - 20174159
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  20174106 tttcattttttccgtcactaatttccctcgctaattttgcttttcctggtagtg 20174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20429551 - 20429604
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  20429551 tttcattttttccgtcactaatttcccttgttaattttgctttttctagtagtg 20429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24605924 - 24605977
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24605924 tttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37135338 - 37135285
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37135338 tttcattttttccgtcactaatttccctcactaattttgttttttctagtagtg 37135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47523703 - 47523650
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  47523703 tttcattttttccgtcactaatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23577242 - 23577183
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgatggaa 60  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| ||||    
T  23577242 tttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtgaaggaa 23577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2650881 - 2650828
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  2650881 tttcattttttccgtcactaaattccctcactaatttttctttttctagtagtg 2650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 15014454 - 15014405
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  15014454 attttttccgtcaccaatttccctcgctaattttactttttctagtagtg 15014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 48933226 - 48933275
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  48933226 attttttccgtcactaattttcctcgctaattttgctttttctaatagtg 48933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21871654 - 21871708
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||    
T  21871654 tttcattttttccgccactgattttcctcgctaattttgttttttctagtagtga 21871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 687956 - 688005
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  687956 atttttttcgtcattgatttccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33427776 - 33427828
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  33427776 tttcattttttg-gtcactaatttccctcgctaattttgttttttctagtagtg 33427828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 42926467 - 42926419
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  42926467 ttttttccgtcactaattttcctcgctaattttattttttctagtagtg 42926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1824246 - 1824200
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  1824246 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 1824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 4514858 - 4514904
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  4514858 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 4514904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 816239 - 816190
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| |||| |||| |||||| ||||||||    
T  816239 ttttttccgtcactaatttccctccctaaatttgttttttccagtagtga 816190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14786688 - 14786635
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| ||||||||||| |||| ||||||||| |||||||| |||||    
T  14786688 tttcattttttctgtcactaattttcctcactaattttgttttttctaatagtg 14786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 15969876 - 15969925
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||| ||||||  ||||||| ||||||||||||||||    
T  15969876 ttttttccgtcactaatatccctcattaattttactttttctagtagtga 15969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 20924007 - 20923958
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| |||||||||||||||  ||||||| |||||||||||||||    
T  20924007 attttttccatcactaatttccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 32267438 - 32267483
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtag 52  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||    
T  32267438 tttttccgtcactaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38090353 - 38090402
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||||    
T  38090353 attttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27132770 - 27132722
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||| || |||||||||| |||||||| ||||||||||||||    
T  27132770 attttttccgttaccaatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 2457761 - 2457808
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| ||||    
T  2457761 ttttctgtcactaatttccctccctaattttgcttttcctagtggtga 2457808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 27304960 - 27305011
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||| |||||||||||||||| ||||||||| |||| ||||| |||||    
T  27304960 attttttctgtcactaatttccctccctaattttgtttttcctagttgtgat 27305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 36993913 - 36993959
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||| |||| |||||||||| |||||||||||||| |||||||||    
T  36993913 ttttccatcacaaatttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 39979670 - 39979624
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| ||| |||||    
T  39979670 ttttccgtcacaaatttccctccctaattttgcttttcctaatagtg 39979624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 40847481 - 40847435
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||| ||||| |||||||||    
T  40847481 ttttccgtcacaaatttccctccctaattttacttttcctagtagtg 40847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 5106781 - 5106740
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    ||||||| |||||||||||||||  |||||||||||||||||    
T  5106781 ttttttctgtcactaatttcccttactaattttgctttttct 5106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 30908992 - 30908943
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||| ||||||||||||  ||| |||||||||||||| |||||||||||    
T  30908992 ttttttcgtcactaatttttctctctaattttgcttttcctagtagtgat 30908943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38057722 - 38057771
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| |||||||||| ||||| | |||||||||||| ||||||||    
T  38057722 attttttccatcactaattttcctcgttgattttgctttttgtagtagtg 38057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 10222677 - 10222629
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||| ||||||||||| |||| |||||| || |||||||||||||||    
T  10222677 tttttctgtcactaattttcctccctaattatgttttttctagtagtga 10222629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41736254 - 41736308
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41736254 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 41736308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44476428 - 44476374
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476428 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 44476374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12779682 - 12779735
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12779682 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20065127 - 20065074
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20065127 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37552309 - 37552362
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37552309 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15636788 - 15636733
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15636788 tttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtgat 15636733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21293764 - 21293709
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21293764 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtgat 21293709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22140417 - 22140363
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22140417 tttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtga 22140363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27039961 - 27039907
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27039961 tttcattttttccgtcactaatttccctctctaattttgctttttctagtagtga 27039907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7093650 - 7093703
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7093650 tttcattttttccgtcactaatttccctcgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13788108 - 13788055
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13788108 tttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtg 13788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32185914 - 32185967
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32185914 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43408564 - 43408511
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43408564 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 43408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28319632 - 28319580
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28319632 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1141618 - 1141664
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1141618 tttcattttttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18551306 - 18551252
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  18551306 tttcattttttccgtcactaattttcctcgctaattttgctttttttagtagtga 18551252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32300533 - 32300579
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32300533 tttcattttttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28841395 - 28841342
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  28841395 tttcattttttccgttactaatttccctcgctaattttgcttttcctagtagtg 28841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44723014 - 44723067
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  44723014 tttcattttttccatcattaatttccctcgctaattttgctttttctagtagtg 44723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23388431 - 23388379
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23388431 tttcattttttccgtcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 32009040 - 32009088
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32009040 ttttttccgtcactaattttcctcgctaattttgctttttctagtagtg 32009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 23858005 - 23857958
Alignment:
Q  7 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23858005 ttttcccgtcactaatttccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37724045 - 37723990
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  37724045 tttcattttttccgtcactaatttccctcgctgatttttctttttctagcagtgat 37723990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 8430382 - 8430431
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  8430382 attttttccgtcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14757174 - 14757121
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  14757174 tttcattttttccgtcattaattttcttcgctaattttgctttttctagtagtg 14757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38362324 - 38362276
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctag 49  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38362324 tttcattttttccgtcactaatttcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 41637707 - 41637754
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  41637707 ttttccgtcacaaatttccctccctaattttgctttttctagtagtga 41637754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 22192265 - 22192315
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  22192265 attttttccgtcactaatttctctccctgattttgctttttctagtagtga 22192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28262446 - 28262496
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  28262446 tttcattttttccatcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13613146 - 13613093
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  13613146 tttcatttttttcgtcactaattttcctcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26243370 - 26243321
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  26243370 atttttaccgccactaatttccctcgttaattttgctttttctagtagtg 26243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 36550921 - 36550970
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  36550921 attttttccatcactaatttccctctctaattttgttttttctagtagtg 36550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12860282 - 12860235
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttcta 48  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  12860282 tttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 16098966 - 16098916
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||||||||    
T  16098966 attttttctgttactaatttccctccctaattttgatttttctagtagtga 16098916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 29749449 - 29749403
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  29749449 ttttccgtcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 40018888 - 40018938
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  40018888 attttttccgtcactaatttccctttttaattttgttttttctagtagtga 40018938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 26687738 - 26687689
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  26687738 ttttttccgtcattaatttccctccttaattttgctttatctagtagtga 26687689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9590552 - 9590588
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattt 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  9590552 tttcattttttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9004361 - 9004306
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||| ||||||||||||| | ||||| |||||||  ||||||||||||||||    
T  9004361 tttcatttcttccgtcactaatattcctcgttaattttattttttctagtagtgat 9004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 30783427 - 30783474
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||    
T  30783427 ttttccgtcacaaatttcccttcctaattttgcttttcctagtagtga 30783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 27327705 - 27327751
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| ||||||| || |||||||||||||| |||||||||    
T  27327705 ttttccgtcacaaatttccatccctaattttgcttttcctagtagtg 27327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 37802428 - 37802378
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||  |||||| ||| |||||||||||||| ||||||||||    
T  37802428 attttttccgtcatcaatttctctccctaattttgcttttcctagtagtga 37802378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22297 - 22351
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22297 tttcatttttttcgtcactaatttccctcgctaattttgctttttctagtagtga 22351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 202860 - 202914
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  202860 tttcattttttccgtcactaatttccctcgctaatttttctttttctagtagtga 202914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3828 - 3881
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3828 tttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 274718 - 274665
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  274718 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6032 - 5979
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6032 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9282 - 9229
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9282 tttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15043 - 14990
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15043 tttcattttttcggtcactaatttccctcgctaattttgctttttctagtagtg 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19689 - 19742
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19689 tttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 19742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10716 - 10663
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10716 tttcattttttccgtcactaatttccctcgctaattttgctttttctagcagtg 10663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12738 - 12791
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12738 tttcattttttccgtcactaatttccctcgctaattttgctttttcaagtagtg 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39756 - 39703
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39756 tttcattttttccatcactaatttccctcgctaattttgctttttctagtagtg 39703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17670 - 17617
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17670 tttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 219722 - 219775
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  219722 tttcattttttccgtcactaatttccgtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 182616 - 182668
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  182616 tttcattttttccgtcactaatttccctcgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 215716 - 215663
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  215716 tttcattttttccgtcgctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 84389 - 84442
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  84389 tttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8163 - 8110
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8163 tttcattttttccgtcattaatttccctcgctaattttgctttttctagaagtg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21895 - 21842
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  21895 tttcattttttccgtcattaatttccctcgctaattttgctttttctagaagtg 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7591 - 7643
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 53  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7591 tttcatattttccgtcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6881 - 6931
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6881 tttcattttttccgtcaataatttccctcgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9896 - 9949
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  9896 tttcattttttccttcactaatttcactcgctaattttgctttttctagtagtg 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26569 - 26622
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26569 tttcattttttccgtcactaatttccgtcactaattttgctttttctagtagtg 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44003 - 44056
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  44003 tttcattttttccatcactaatttccctcgctaatttttctttttctagtagtg 44056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 966 - 918
Alignment:
Q  6 ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  966 ttttttccgtcagtaatttccctcgctaattttgctttttctagtagtg 918  T

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Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 74770 - 74720
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  74770 tttcattttttccgtcactaatttcccttgctaattttgccttttctagta 74720  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 173532 - 173585
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  173532 tttcattttttccgtcactaattt-cctcgctaattttgctttttctaatagtga 173585  T

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Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 84727 - 84678
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagt 50  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  84727 tttcattttttctgtcactaatttccctcactaattttgctttttctagt 84678  T

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Target: scaffold0087 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 37836 - 37785
Alignment:
Q  5 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgat 56  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  37836 attttttccgtcactaatttcccctgctaattttgttttttctagtagtgat 37785  T

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Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7542 - 7592
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagta 51  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  7542 tttcattttttccgtcactaattttcctcgttaattttactttttctagta 7592  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 440049 - 440102
Alignment:
Q  1 tttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||||||||||||    
T  440049 tttcattttttccgtcactaatattccttgctaattttactttttctagtagtg 440102  T

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Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 58675 - 58722
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtga 55  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  58675 ttttccgtcacaaatttccctccctaattttgcttttcctagtagtga 58722  T

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Target: scaffold0655 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3208 - 3162
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||    
T  3208 ttttccgtcactaatttccctccctaatttttctttttctattagtg 3162  T

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Target: scaffold0069 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10251 - 10297
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||||||||| |||| ||||    
T  10251 ttttccgtcacaaatttccctccctaattttgcttttcctagcagtg 10297  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 74587 - 74541
Alignment:
Q  8 ttttccgtcactaatttccctcgctaattttgctttttctagtagtg 54  Q
    ||||||||||| |||||||||| |||||||| ||||| |||||||||    
T  74587 ttttccgtcacaaatttccctccctaattttacttttcctagtagtg 74541  T

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