View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17102_low_2 (Length: 473)
Name: NF17102_low_2
Description: NF17102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17102_low_2 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 367; Significance: 0; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 80 - 454
Target Start/End: Original strand, 39726364 - 39726738
Alignment:
| Q |
80 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39726364 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatctcggtcgtatc |
39726463 |
T |
 |
| Q |
180 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
279 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726464 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
39726563 |
T |
 |
| Q |
280 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726564 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
39726663 |
T |
 |
| Q |
380 |
agaccctcaactactcttcaagataacagcaccctaccgaaatccaaacaaccactacacatatgacgggccctt |
454 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726664 |
agaccctcaactactcttcaagataacagcaccctaccgaaatccaaacaaccactacacatatgacgggccctt |
39726738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 80 - 454
Target Start/End: Original strand, 38987651 - 38988019
Alignment:
| Q |
80 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38987651 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatctcggtcgtatc |
38987750 |
T |
 |
| Q |
180 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
279 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38987751 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggagga------gaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
38987844 |
T |
 |
| Q |
280 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38987845 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
38987944 |
T |
 |
| Q |
380 |
agaccctcaactactcttcaagataacagcaccctaccgaaatccaaacaaccactacacatatgacgggccctt |
454 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38987945 |
agaccctcaactactcttcaagataacagcagcctaccgaaatccaaacaaccactacacatatgacgggccctt |
38988019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 80 - 454
Target Start/End: Original strand, 39879760 - 39880134
Alignment:
| Q |
80 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
179 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879760 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
39879859 |
T |
 |
| Q |
180 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
279 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879860 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
39879959 |
T |
 |
| Q |
280 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879960 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
39880059 |
T |
 |
| Q |
380 |
agaccctcaactactcttcaagataacagcaccctaccgaaatccaaacaaccactacacatatgacgggccctt |
454 |
Q |
| |
|
| || || |||| |||||| ||| |||| |||||||| ||| || ||| |||||||||||| |||||||| |
|
|
| T |
39880060 |
aaacactaaactcatcttcagcgtaagagcagcctaccgagatcaaaccaaaagctacacatatgatgggccctt |
39880134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 81 - 454
Target Start/End: Original strand, 40418230 - 40418597
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
180 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40418230 |
gccaaaaaatattgtttagctgatgctgtggttgctcgtgtgaaagatattggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
40418329 |
T |
 |
| Q |
181 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
40418330 |
taaaacccggtgaccatgctcttggttatgacctgtctggagga------gaaggaggagctgacaccaacatcaatatcaaccttcctgctgccatttt |
40418423 |
T |
 |
| Q |
281 |
gatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
380 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40418424 |
gatcaccaagattagttatgccgaagagaatggtagagttgttgctcttcatgataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
40418523 |
T |
 |
| Q |
381 |
gaccctcaactactcttcaagataacagcaccctaccgaaatccaaacaaccactacacatatgacgggccctt |
454 |
Q |
| |
|
||| || |||| |||||||| ||| |||| |||||||| ||| || ||| |||||||||||| |||||||| |
|
|
| T |
40418524 |
gacactaaactcctcttcaacgtaagagcagcctaccgagatcaaaccaaaagctacacatatgatgggccctt |
40418597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 81 - 383
Target Start/End: Original strand, 39168793 - 39169098
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
180 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||| |
|
|
| T |
39168793 |
gccaaaaaatatcggttagctgatgccgtggttgctcgtgtggaagattttggaaataatgacacaacttttcaaatcaaaactcatctaggtcatattt |
39168892 |
T |
 |
| Q |
181 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
280 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||| | || || |||||||||| ||||||| | |||| | ||||||||||||| ||||| |
|
|
| T |
39168893 |
taaaatccggtgactatgctcttggttatgacttgtctggacgtaaagaaggaggaggagctaacaccaatatcaatggcgaccttcctgctgcaatttt |
39168992 |
T |
 |
| Q |
281 |
gatcagcaagattagttatgccgaagtgaatggtaga---gttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaa |
377 |
Q |
| |
|
||| | ||||| |||||||| |||| ||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
39168993 |
gattaccaagagtagttatgatgaagaaaatggtagaattgttgttgttgttgagggtaagtgggaatctgattatcaactctttttaaaagatctacaa |
39169092 |
T |
 |
| Q |
378 |
caagac |
383 |
Q |
| |
|
|||||| |
|
|
| T |
39169093 |
caagac |
39169098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 3299480 - 3299620
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
177 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3299480 |
gccaaaaaatatcgtttagctgatgccatggttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaagactcatcttggtcgta |
3299579 |
T |
 |
| Q |
178 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3299580 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
3299620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 3392373 - 3392513
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
177 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3392373 |
gccaaaaaatatcgtttagctgatgccatggttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaagactcatcttggtcgta |
3392472 |
T |
 |
| Q |
178 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3392473 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
3392513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 84 - 225
Target Start/End: Original strand, 39399809 - 39399950
Alignment:
| Q |
84 |
aaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattttaa |
183 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39399809 |
aaaaaataccgtttagctgatgccgtggttgctcgtgtggaaaattttggaaataatgacacaacttttcaaatcaggactcatcttggtcatattttaa |
39399908 |
T |
 |
| Q |
184 |
aacccggtgaccatgctcttggttatgacctgtctggaggag |
225 |
Q |
| |
|
|| |||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
39399909 |
aatccggtgactatgctcttggttatgacttgtctggaggag |
39399950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 1163824 - 1163680
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga-cacaacttttcaaatcaggactcatcttggtcgtatt |
179 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||||| ||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1163824 |
gccaaaaaatatcgtttagctaatgccatagttgctcgtgtcaaagatattggaaataataatcaca-cttttcaaatcaggactcatcttggtcgtatt |
1163726 |
T |
 |
| Q |
180 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggag |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1163725 |
ttaaaacccggtgaccatgctcttggttatgacctgcctgaaggag |
1163680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 1849912 - 1850059
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
177 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |
|
|
| T |
1849912 |
gccaaaaaatatcgtttagctaatgccatagttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaggactcatcttagtcgta |
1850011 |
T |
 |
| Q |
178 |
ttttaaaacccggtgaccatgctcttggttatgacctgtctggaggag |
225 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1850012 |
ttttaaaacctggtgaccatgctcttggttatgacctgcctgaaggag |
1850059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 261 - 398
Target Start/End: Original strand, 3299639 - 3299779
Alignment:
| Q |
261 |
aaccttcctgctgccattttgatcagcaagattagttatgccgaagtg---aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaac |
357 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3299639 |
aaccttcctgctgccattttgatcaccaaaattagttatgccgaagaggagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaac |
3299738 |
T |
 |
| Q |
358 |
tcttcttcaatgatctacaacaagaccctcaactactcttc |
398 |
Q |
| |
|
||||||| || ||||||||||||||| || |||| |||||| |
|
|
| T |
3299739 |
tcttcttaaaagatctacaacaagacactaaactcctcttc |
3299779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 261 - 398
Target Start/End: Original strand, 3392532 - 3392672
Alignment:
| Q |
261 |
aaccttcctgctgccattttgatcagcaagattagttatgccgaagtg---aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaac |
357 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3392532 |
aaccttcctgctgccattttgatcaccaaaattagttatgccgaagaggagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaac |
3392631 |
T |
 |
| Q |
358 |
tcttcttcaatgatctacaacaagaccctcaactactcttc |
398 |
Q |
| |
|
||||||| || ||||||||||||||| || |||| |||||| |
|
|
| T |
3392632 |
tcttcttaaaagatctacaacaagacactaaactcctcttc |
3392672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 1163639 - 1163549
Alignment:
| Q |
308 |
gaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttc |
398 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||| |||||| |
|
|
| T |
1163639 |
gaatggtagagttgttcctgttcaggataagtgggaatctggttatcaactcttcttaaaagatctacaacaagaccctaaactcctcttc |
1163549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 1850100 - 1850190
Alignment:
| Q |
308 |
gaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttc |
398 |
Q |
| |
|
||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||| |||||| |
|
|
| T |
1850100 |
gaatggtagagttattcctgttcaggataagtgggaatctgattatcaactcttcttaaaagatttacaacaagaccctaaactcctcttc |
1850190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 40102315 - 40102213
Alignment:
| Q |
110 |
ggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattttaaaacccggtgaccatgctcttggttat |
209 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| | ||| | |||| ||||||||| ||| | |||| ||| |||||||||||| |||||||| |
|
|
| T |
40102315 |
ggttgctcgtgtgaaagattttggaaagaatgacacgagatttaatatcaagactcatctgggttatcttttgaaatttggtgaccatgcttttggttat |
40102216 |
T |
 |
| Q |
210 |
gac |
212 |
Q |
| |
|
||| |
|
|
| T |
40102215 |
gac |
40102213 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 39400042 - 39400074
Alignment:
| Q |
332 |
ggataagtgggaatctgattatcaactcttctt |
364 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
39400042 |
ggataagtggcaatctgattatcaactcttctt |
39400074 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 81 - 400
Target Start/End: Complemental strand, 25912429 - 25912113
Alignment:
| Q |
81 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
180 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25912429 |
gccaaaaaatatcgtttagctgatgatgtggttgctcgtgtgaaagatattggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattc |
25912330 |
T |
 |
| Q |
181 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
280 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25912329 |
taaaacccgatgaccatgctcttggttatgacctgtctagaggag---gagaaggaggagctaacaccaacaccaataacaaccttcatgctgccatttt |
25912233 |
T |
 |
| Q |
281 |
gatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
380 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||| |
|
|
| T |
25912232 |
gatcaccaagattagttatgccgaagagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaactcttcttaaattatctacagcaa |
25912133 |
T |
 |
| Q |
381 |
gaccctcaactactcttcaa |
400 |
Q |
| |
|
|||||| |||| ||||||| |
|
|
| T |
25912132 |
gaccctaaactgatcttcaa |
25912113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 44444838 - 44444772
Alignment:
| Q |
146 |
aacttttcaaatcaggactcatcttggtcgtattttaaaacccggtgaccatgctcttggttatgac |
212 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
44444838 |
aacttttcaaatcaagactcatcttggtcgtattttaaaacctggtgactatgctcttggttatgac |
44444772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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