View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17103_low_6 (Length: 261)
Name: NF17103_low_6
Description: NF17103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17103_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 47309964 - 47309726
Alignment:
| Q |
14 |
caaatatctctccaatctccatttcctctccaaccaacaccatgatttaaattgaaaattaatccaattatccaagttacccataattaaagaattgatt |
113 |
Q |
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| T |
47309964 |
caaatatctctccaatctccatttcctctccaaccaacaccatgatttaaatttaaaattaatccaattatccaagttacccataattaaagaattgatt |
47309865 |
T |
|
| Q |
114 |
gttatcttaatttggaatagcacttttccacagctgcagcacccccttaatgcatgtaaacaagtttcctccacgtcatcgcaataaacacacatttgag |
213 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47309864 |
gttatcttcatttggaatagcacttttccacagctgcagcacccccttaatgcatgtaaacaagtttcctccacgtcatcgcaataaacacacatttgag |
47309765 |
T |
|
| Q |
214 |
ggagagacaacaaggagtggtaataacggtgagaataat |
252 |
Q |
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||||||||| |||||||||||||||||||||| |||||| |
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| T |
47309764 |
ggagagacaccaaggagtggtaataacggtgataataat |
47309726 |
T |
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