View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17104_high_4 (Length: 497)
Name: NF17104_high_4
Description: NF17104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17104_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 1 - 488
Target Start/End: Original strand, 32209276 - 32209763
Alignment:
| Q |
1 |
caggcatctacctcctcttcctatataccctctcatcgtccccaaccgtagctcgtgctatccttgtcggcgcggtttttctcctggcaatgcttttatt |
100 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32209276 |
caggcatctacctcctcttcctatattccctctcatcgtccccaaccgtagctcgtgctatccttgtcggcgcggtttttctcctggcaatgcttttatt |
32209375 |
T |
|
| Q |
101 |
cttgccatacattgtttattcaagagaatggtcttgtttcaccctccctgcaagcttttctttatatgagtcaagtttcgctcgtattgacaataatgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32209376 |
cttgccatacattgtttattcaagagaatggtcttgtttcaccctccctacaagcttttctttatatgagtcaagtttcgctcgtattgacaataatgat |
32209475 |
T |
|
| Q |
201 |
gaacatgagcttcacaaagaactaattagtatggaggataatgatgcaatgaatagtggaagtgtacaaagcatgatgatagagaagagtttttgttttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32209476 |
gaacatgagcttcacaaagaactaattagtatggaggataatgatgcaatgaatagtggaagtgtacaaagcatgatgatagagaagagtttttgttttg |
32209575 |
T |
|
| Q |
301 |
ctagtgtgttggaaaaagagaaacttacaatgcttggtgaagagcatacaactaagaagttgattcgtaggtgggatttttggctatattacattgcata |
400 |
Q |
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||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32209576 |
ctagtgtattggaaaaagagaaacttacaatgcttggcgaagagcatacaactaagatgttgattcgtaggtgggatttttggctatattacattgcata |
32209675 |
T |
|
| Q |
401 |
tttttgtggaggaacaattggattggtttatagtaataacttgggccaaatttctcaatcacttggacatggttctctcacaggttct |
488 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32209676 |
tttttgtggaggaacaattggattggtttatagtaataacttgggccaaatttctcaatcacttggacatggttctctcacaagttct |
32209763 |
T |
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