View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17104_low_22 (Length: 277)
Name: NF17104_low_22
Description: NF17104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17104_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 32854809 - 32855057
Alignment:
| Q |
13 |
ataggggcttttcataacatccaataagatgatgcatgaggttgacaactctagcctcatactttatccttaaccaacaacaacttatatttatttttac |
112 |
Q |
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| T |
32854809 |
ataggggcttttcataacatccaataagatgatgcatgaggttgacaactctagcctcatactttatccttaaccaacaacaacttatatttatttttac |
32854908 |
T |
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| Q |
113 |
catatgaaattaattctacaaaatcaacaatatacaaaacaacatatttcctttttgacaattaaggaaactaaattgaaacattcttctacaacaatga |
212 |
Q |
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| T |
32854909 |
tatatgaaattaattctacaaaatcaacaatatacaaaacaacatatttcctttttgacaattaaggaaactaaattgaaacattcttctacaacaatga |
32855008 |
T |
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| Q |
213 |
aagaatgaggtggcatttggtccttatctacctaaaataagcacaatct |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32855009 |
aagaatgaggtggcatttggtccttatctacctaaaataagcacaatct |
32855057 |
T |
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