View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17104_low_23 (Length: 275)
Name: NF17104_low_23
Description: NF17104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17104_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 45066905 - 45066663
Alignment:
| Q |
18 |
ataagtaaatgcggggttggttcttcaatataatgtaattctctatgtttaaaacatatttttcgaaaataaatatatctctaggatattaaagaatttt |
117 |
Q |
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| T |
45066905 |
ataagtaaatgcggggttggttcttcaatataatgtaattctctatgtttaaaacatatttttcgaaaataaatatatcactaggattttaaagaatttt |
45066806 |
T |
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| Q |
118 |
gtgttataaaattggtatgcttgaagttctgagaaacacttatagaaatactccttaaatactgttattcaaatgatctaagttttatcagtcacaattg |
217 |
Q |
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| T |
45066805 |
gcgttataaaattggtatgcttgaagttctgagaaacacttaaagaaatactccttaaatattgttattcaaatgatctaagttttatcagtcacaattg |
45066706 |
T |
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| Q |
218 |
gaaaaggatttgaatcgataagttaacaactccaatgagtata |
260 |
Q |
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| T |
45066705 |
gaaaaggatttgaatcgacaagttaacaactccaatgagtata |
45066663 |
T |
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