View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17106_low_12 (Length: 296)

Name: NF17106_low_12
Description: NF17106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17106_low_12
NF17106_low_12
[»] chr8 (35 HSPs)
chr8 (36-296)||(23216718-23216978)
chr8 (36-296)||(17264560-17264832)
chr8 (40-240)||(23118748-23118947)
chr8 (41-204)||(22499247-22499410)
chr8 (36-293)||(45561547-45561816)
chr8 (36-204)||(24554518-24554685)
chr8 (36-204)||(33170315-33170481)
chr8 (40-265)||(7468366-7468594)
chr8 (40-200)||(20707855-20708014)
chr8 (36-296)||(25607962-25608233)
chr8 (36-265)||(17499921-17500143)
chr8 (36-162)||(18043137-18043262)
chr8 (92-265)||(24237146-24237318)
chr8 (99-296)||(23879077-23879279)
chr8 (94-262)||(24906046-24906227)
chr8 (78-294)||(19333878-19334105)
chr8 (168-289)||(22319816-22319936)
chr8 (109-265)||(18263287-18263438)
chr8 (36-205)||(24266058-24266223)
chr8 (197-285)||(22311276-22311365)
chr8 (122-261)||(22883922-22884060)
chr8 (131-262)||(23350317-23350445)
chr8 (168-265)||(11600253-11600351)
chr8 (86-204)||(21233974-21234091)
chr8 (199-289)||(25293761-25293849)
chr8 (199-289)||(25755750-25755838)
chr8 (142-264)||(16000334-16000455)
chr8 (234-289)||(645975-646031)
chr8 (234-289)||(831710-831766)
chr8 (234-289)||(269890-269945)
chr8 (36-198)||(26009496-26009651)
chr8 (234-289)||(41509127-41509183)
chr8 (67-205)||(29295973-29296104)
chr8 (217-296)||(18120265-18120344)
chr8 (234-289)||(23509007-23509063)
[»] chr3 (36 HSPs)
chr3 (36-296)||(6817483-6817743)
chr3 (36-296)||(17760653-17760914)
chr3 (36-296)||(19061973-19062234)
chr3 (36-296)||(15551746-15552006)
chr3 (36-204)||(5230554-5230722)
chr3 (40-204)||(17320521-17320684)
chr3 (36-204)||(43429481-43429648)
chr3 (36-265)||(41659679-41659904)
chr3 (78-210)||(31416181-31416312)
chr3 (36-210)||(21168643-21168814)
chr3 (94-265)||(15988645-15988829)
chr3 (92-265)||(25106222-25106394)
chr3 (95-265)||(11517334-11517503)
chr3 (44-205)||(18968148-18968305)
chr3 (168-265)||(10902659-10902757)
chr3 (109-204)||(14819791-14819882)
chr3 (36-205)||(4164189-4164354)
chr3 (36-205)||(6230603-6230768)
chr3 (103-162)||(17391132-17391191)
chr3 (218-289)||(12490677-12490749)
chr3 (36-205)||(4147637-4147802)
chr3 (168-265)||(38378152-38378250)
chr3 (36-205)||(33371311-33371474)
chr3 (197-265)||(14182277-14182346)
chr3 (235-289)||(7851623-7851678)
chr3 (252-289)||(12950851-12950888)
chr3 (155-265)||(8602472-8602579)
chr3 (234-289)||(38813262-38813318)
chr3 (230-284)||(20419017-20419071)
chr3 (224-265)||(14968079-14968121)
chr3 (252-289)||(11381040-11381077)
chr3 (36-73)||(22637393-22637430)
chr3 (234-278)||(48419905-48419950)
chr3 (234-289)||(17936394-17936450)
chr3 (234-289)||(19944744-19944800)
chr3 (168-262)||(40041455-40041550)
[»] chr2 (16 HSPs)
chr2 (40-244)||(6092519-6092722)
chr2 (40-204)||(25132286-25132449)
chr2 (36-204)||(24272112-24272277)
chr2 (92-296)||(45620292-45620498)
chr2 (142-265)||(23614457-23614582)
chr2 (168-265)||(25593352-25593450)
chr2 (36-204)||(30994937-30995090)
chr2 (142-264)||(18533512-18533634)
chr2 (200-296)||(43640582-43640675)
chr2 (197-261)||(29111996-29112061)
chr2 (198-289)||(19435787-19435877)
chr2 (137-205)||(19648243-19648310)
chr2 (197-280)||(24089289-24089371)
chr2 (137-205)||(24089374-24089440)
chr2 (218-290)||(19657708-19657781)
chr2 (43-198)||(32738538-32738686)
[»] chr4 (28 HSPs)
chr4 (36-296)||(15216090-15216351)
chr4 (36-265)||(50224038-50224266)
chr4 (36-244)||(47470237-47470444)
chr4 (36-204)||(41919191-41919359)
chr4 (40-244)||(13595921-13596126)
chr4 (94-258)||(54365964-54366130)
chr4 (36-201)||(19557394-19557558)
chr4 (36-204)||(10239384-10239551)
chr4 (75-204)||(24237010-24237140)
chr4 (92-265)||(17378068-17378249)
chr4 (36-265)||(19623919-19624142)
chr4 (198-296)||(5372971-5373069)
chr4 (103-296)||(14569533-14569728)
chr4 (109-205)||(41258293-41258385)
chr4 (168-265)||(12732375-12732473)
chr4 (78-204)||(13448984-13449109)
chr4 (36-205)||(18241131-18241297)
chr4 (197-265)||(12136170-12136239)
chr4 (137-204)||(7187875-7187941)
chr4 (137-204)||(5407307-5407374)
chr4 (234-289)||(43283298-43283354)
chr4 (142-204)||(5373074-5373136)
chr4 (133-204)||(12136243-12136312)
chr4 (122-198)||(19082904-19082978)
chr4 (234-289)||(10642313-10642369)
chr4 (218-289)||(15211438-15211510)
chr4 (234-289)||(34393324-34393380)
chr4 (234-289)||(55378769-55378825)
[»] chr1 (20 HSPs)
chr1 (36-267)||(41213540-41213769)
chr1 (40-202)||(33383989-33384151)
chr1 (40-265)||(5770079-5770302)
chr1 (36-265)||(21041856-21042082)
chr1 (36-265)||(40555439-40555665)
chr1 (36-204)||(5472338-5472502)
chr1 (40-174)||(40438304-40438437)
chr1 (109-204)||(20820561-20820657)
chr1 (36-205)||(52397723-52397888)
chr1 (132-264)||(40438161-40438305)
chr1 (36-244)||(46143842-46144044)
chr1 (36-205)||(21193225-21193389)
chr1 (44-178)||(50001917-50002047)
chr1 (142-265)||(20191904-20192027)
chr1 (155-265)||(25093028-25093138)
chr1 (142-263)||(78389-78511)
chr1 (78-265)||(18164287-18164471)
chr1 (234-289)||(41217482-41217539)
chr1 (197-265)||(20820661-20820730)
chr1 (234-289)||(22080129-22080185)
[»] chr6 (20 HSPs)
chr6 (36-204)||(34964995-34965162)
chr6 (40-204)||(22468050-22468214)
chr6 (36-204)||(29162857-29163025)
chr6 (36-204)||(22595604-22595770)
chr6 (40-209)||(15006579-15006736)
chr6 (43-265)||(16131326-16131562)
chr6 (103-265)||(23219107-23219268)
chr6 (36-204)||(19852329-19852492)
chr6 (103-265)||(21929567-21929742)
chr6 (78-204)||(31469485-31469609)
chr6 (52-143)||(15295494-15295586)
chr6 (197-265)||(17375599-17375668)
chr6 (41-205)||(22846190-22846348)
chr6 (36-206)||(12310949-12311114)
chr6 (78-204)||(19670614-19670739)
chr6 (63-205)||(33540178-33540315)
chr6 (197-265)||(34965166-34965235)
chr6 (252-289)||(18397122-18397158)
chr6 (218-265)||(4174595-4174643)
chr6 (234-289)||(14628566-14628622)
[»] chr5 (22 HSPs)
chr5 (36-296)||(11963659-11963929)
chr5 (40-204)||(23236352-23236515)
chr5 (47-204)||(19871987-19872144)
chr5 (88-296)||(14345508-14345728)
chr5 (36-210)||(5623356-5623527)
chr5 (36-265)||(11765596-11765821)
chr5 (63-204)||(3420776-3420914)
chr5 (41-200)||(26561735-26561891)
chr5 (94-204)||(33628216-33628327)
chr5 (44-205)||(29912119-29912276)
chr5 (199-296)||(20456416-20456512)
chr5 (36-205)||(24082178-24082343)
chr5 (36-205)||(6454769-6454934)
chr5 (218-289)||(23492159-23492231)
chr5 (235-289)||(3671689-3671744)
chr5 (218-289)||(11579845-11579917)
chr5 (155-265)||(16837630-16837740)
chr5 (184-255)||(23412182-23412253)
chr5 (218-285)||(28888138-28888206)
chr5 (219-289)||(17907739-17907810)
chr5 (198-296)||(24227785-24227882)
chr5 (234-289)||(25944755-25944811)
[»] scaffold0442 (2 HSPs)
scaffold0442 (36-265)||(1851-2077)
scaffold0442 (36-86)||(14159-14208)
[»] scaffold0004 (3 HSPs)
scaffold0004 (40-265)||(84491-84710)
scaffold0004 (36-201)||(25616-25780)
scaffold0004 (218-289)||(331026-331098)
[»] chr7 (33 HSPs)
chr7 (36-244)||(9322962-9323168)
chr7 (36-178)||(17947995-17948136)
chr7 (40-204)||(4482336-4482498)
chr7 (40-244)||(9641119-9641324)
chr7 (78-296)||(21677364-21677592)
chr7 (92-296)||(4072842-4073048)
chr7 (169-296)||(28718224-28718352)
chr7 (79-265)||(18920976-18921160)
chr7 (88-204)||(39294094-39294211)
chr7 (114-204)||(15980468-15980559)
chr7 (44-204)||(14938780-14938936)
chr7 (44-204)||(15366373-15366529)
chr7 (38-200)||(31499313-31499463)
chr7 (212-296)||(14278745-14278830)
chr7 (86-204)||(28388550-28388667)
chr7 (197-265)||(13460560-13460629)
chr7 (126-190)||(4437024-4437088)
chr7 (218-289)||(18305836-18305908)
chr7 (234-284)||(12545811-12545862)
chr7 (197-265)||(13452418-13452487)
chr7 (168-255)||(18081206-18081293)
chr7 (257-289)||(7286527-7286559)
chr7 (137-205)||(9058567-9058633)
chr7 (234-289)||(13868085-13868141)
chr7 (36-102)||(12245755-12245822)
chr7 (218-296)||(15305677-15305755)
chr7 (75-106)||(15980553-15980584)
chr7 (38-97)||(33557966-33558025)
chr7 (126-200)||(4444425-4444499)
chr7 (220-289)||(16481034-16481104)
chr7 (252-289)||(11285306-11285343)
chr7 (218-265)||(14938959-14939007)
chr7 (218-265)||(15366552-15366600)
[»] scaffold0017 (1 HSPs)
scaffold0017 (142-296)||(10438-10592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-206)||(99215-99381)
[»] scaffold0032 (3 HSPs)
scaffold0032 (109-265)||(121850-122005)
scaffold0032 (256-289)||(110220-110253)
scaffold0032 (145-205)||(106559-106618)
[»] scaffold0219 (1 HSPs)
scaffold0219 (36-205)||(25913-26078)
[»] scaffold0357 (1 HSPs)
scaffold0357 (44-201)||(5801-5953)
[»] scaffold0138 (2 HSPs)
scaffold0138 (36-205)||(18694-18858)
scaffold0138 (234-289)||(26390-26446)
[»] scaffold0133 (1 HSPs)
scaffold0133 (78-204)||(3653-3778)
[»] scaffold0022 (1 HSPs)
scaffold0022 (57-204)||(129964-130108)
[»] scaffold0327 (1 HSPs)
scaffold0327 (36-205)||(6834-6995)
[»] scaffold0174 (1 HSPs)
scaffold0174 (36-205)||(639-804)
[»] scaffold0148 (1 HSPs)
scaffold0148 (78-204)||(36000-36125)
[»] scaffold0009 (2 HSPs)
scaffold0009 (92-203)||(256737-256847)
scaffold0009 (142-265)||(98838-98960)
[»] scaffold0193 (1 HSPs)
scaffold0193 (36-205)||(3007-3171)
[»] scaffold0165 (1 HSPs)
scaffold0165 (78-203)||(20223-20347)
[»] scaffold0013 (1 HSPs)
scaffold0013 (41-140)||(16689-16789)
[»] scaffold0005 (1 HSPs)
scaffold0005 (103-296)||(247648-247843)
[»] scaffold0387 (1 HSPs)
scaffold0387 (109-208)||(2966-3061)
[»] scaffold0044 (1 HSPs)
scaffold0044 (234-289)||(94206-94262)
[»] scaffold0258 (1 HSPs)
scaffold0258 (108-163)||(8389-8444)
[»] scaffold0001 (1 HSPs)
scaffold0001 (78-204)||(141224-141349)
[»] scaffold0021 (2 HSPs)
scaffold0021 (36-205)||(19759-19923)
scaffold0021 (36-205)||(29335-29499)
[»] scaffold0622 (1 HSPs)
scaffold0622 (218-289)||(7368-7440)
[»] scaffold0051 (1 HSPs)
scaffold0051 (234-289)||(56145-56201)
[»] scaffold0020 (1 HSPs)
scaffold0020 (137-204)||(104116-104183)
[»] scaffold0561 (1 HSPs)
scaffold0561 (168-265)||(4638-4736)
[»] scaffold0112 (1 HSPs)
scaffold0112 (117-203)||(11959-12045)
[»] scaffold0107 (1 HSPs)
scaffold0107 (43-198)||(11509-11657)
[»] scaffold0090 (1 HSPs)
scaffold0090 (200-292)||(6989-7080)
[»] scaffold0047 (2 HSPs)
scaffold0047 (36-198)||(2072-2226)
scaffold0047 (142-247)||(73201-73304)
[»] scaffold0833 (1 HSPs)
scaffold0833 (218-289)||(5325-5397)
[»] scaffold0447 (1 HSPs)
scaffold0447 (218-289)||(2398-2470)
[»] scaffold0383 (2 HSPs)
scaffold0383 (218-289)||(5262-5334)
scaffold0383 (234-289)||(267-323)
[»] scaffold0171 (1 HSPs)
scaffold0171 (234-289)||(30977-31033)
[»] scaffold0115 (1 HSPs)
scaffold0115 (155-265)||(19507-19617)
[»] scaffold0034 (1 HSPs)
scaffold0034 (218-289)||(77521-77593)
[»] scaffold0028 (2 HSPs)
scaffold0028 (234-289)||(91023-91079)
scaffold0028 (137-205)||(70249-70316)
[»] scaffold0088 (1 HSPs)
scaffold0088 (168-265)||(45477-45574)
[»] scaffold0331 (1 HSPs)
scaffold0331 (212-265)||(11564-11618)
[»] scaffold0073 (1 HSPs)
scaffold0073 (184-265)||(55653-55734)
[»] scaffold0057 (1 HSPs)
scaffold0057 (197-261)||(4172-4238)
[»] scaffold0347 (1 HSPs)
scaffold0347 (216-296)||(3585-3665)
[»] scaffold0335 (1 HSPs)
scaffold0335 (218-278)||(10138-10199)
[»] scaffold0808 (1 HSPs)
scaffold0808 (216-267)||(5577-5629)
[»] scaffold0468 (1 HSPs)
scaffold0468 (206-265)||(13263-13323)
[»] scaffold0191 (1 HSPs)
scaffold0191 (234-289)||(688-744)
[»] scaffold0183 (1 HSPs)
scaffold0183 (217-296)||(8616-8695)
[»] scaffold0116 (1 HSPs)
scaffold0116 (234-289)||(27889-27945)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-200)||(99143-99293)
[»] scaffold0292 (1 HSPs)
scaffold0292 (220-289)||(17660-17730)
[»] scaffold0049 (1 HSPs)
scaffold0049 (252-289)||(30608-30645)
[»] scaffold0483 (1 HSPs)
scaffold0483 (218-289)||(4836-4908)
[»] scaffold0231 (1 HSPs)
scaffold0231 (217-296)||(15193-15272)
[»] scaffold0175 (1 HSPs)
scaffold0175 (137-205)||(7131-7196)
[»] scaffold0123 (1 HSPs)
scaffold0123 (222-265)||(33064-33108)
[»] scaffold0109 (1 HSPs)
scaffold0109 (218-289)||(49676-49748)
[»] scaffold0077 (1 HSPs)
scaffold0077 (234-289)||(24580-24636)
[»] scaffold0039 (1 HSPs)
scaffold0039 (218-289)||(21349-21421)
[»] scaffold0023 (1 HSPs)
scaffold0023 (234-289)||(86154-86210)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 36 - 296
Target Start/End: Original strand, 23216718 - 23216978
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| |  || ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23216718 acatcatcataaaaattctccatttcccgacaaatgggcaaatctatacaacataaataaatccagaataaacaatctagaataatcataaagacagaca 23216817  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23216818 tactagatcaaagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcagctcaccgaaagcaaactaatcctgcacgccg 23216917  T
Q  236 tctacccattcaacaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23216918 tctacccattcaacaaacaggtaggcggtccatcacagatccactgggggtaagcttcaca 23216978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 296
Target Start/End: Original strand, 17264560 - 17264832
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  17264560 acatcatcatataaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataatcaatctagaataatcataaagacagaca 17264659  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagc-----------aactcaccgaaagcaaactaat 224  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||           |||||||| ||||||||||| |    
T  17264660 tcctagatcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaatcatcaagaaactcaccaaaagcaaactagt 17264759  T
Q  225 cctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    | |  ||   |||||| ||| || ||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  17264760 catgtactttgtctactcatccatacagacaggtaggcggtccatcacagatccactggaggtaagcttcaca 17264832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 23118947 - 23118748
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  23118947 catcataaaaattatccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatcataaagaaagacatcct 23118848  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtcta 239  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||  ||||||    
T  23118847 agatcagagcttaccctaagactctaagtaaacgataacggagatagctcccgctatccaagcaactcaccaaaagc-aactaatcctgcacttcgtcta 23118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 22499410 - 22499247
Alignment:
Q  41 atcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatccta 140  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22499410 atcataaaaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatcataaagacagacatccta 22499311  T
Q  141 gatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  22499310 gatcagagtctaccctaagactcaaaggaaacgataacggagatagctccctctatccaagcaa 22499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 45561816 - 45561547
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||| || | |||||||| ||||||||||||||| |||||||    
T  45561816 acatcatcatataaattctccaaatcccgacaaattggcaaacctccacaacataaataaatccacagtaaacaatttagaataatcataaacacagaca 45561717  T
Q  136 tcctagatcagagcct-accctaagactctaaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaactaa 223  Q
    |||||||||||||||| |  ||||||||| || |||||||||||||||||||||||||||||           |||||||||||||| |||||||| |||    
T  45561716 tcctagatcagagcctaaatctaagactccaa-gaaacgataacagagatagctcccgctatccaagcgatcaccaagcaactcaccaaaagcaaattaa 45561618  T
Q  224 tcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttc 293  Q
    |||| |||  ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  45561617 tcctgcacttcgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaagcttc 45561547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 24554685 - 24554518
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||||||||| |||  |||||| |||| |||||||||||||||||||||||  | ||| ||||||||||||||||||||| ||||||||    
T  24554685 acatcatcatataaattctctgaattccgacaattgggtaaatctccacaacataaataaatctataattaacaatctagaataatcataa-gacagaca 24554587  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24554586 tcctagatcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaa 24554518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 33170315 - 33170481
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  33170315 acatcatcataaaa-ttctccaaatcccgacaaatggacaaatctccacaacataaataaatccagaataaacaatctagaataatcataaa-acaaaca 33170412  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||    
T  33170413 tcctagatcagagtctaccctaagactctaaggaaacaataatggagatagctcccgatatccaagcaa 33170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 265
Target Start/End: Original strand, 7468366 - 7468594
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  7468366 catcataaaagttctccaaatcccgacaaatgggcaaatctccacaatgtaaataaatccaaaataaacaatctagaataatcat-aagacagacatcct 7468464  T
Q  140 agatca-----gagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgcc 234  Q
    ||||||     ||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| ||||| |||||||| | |||  |    
T  7468465 agatcaaagccgagcctatcctaagactctaaagaaacgataacggagatagctcccactatccaagcaactcacc-aaagc-aactaatcttgcacttc 7468562  T
Q  235 gtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||| || ||| ||| ||||||||||    
T  7468563 gtctacccatccatacagacatgtaggcggtc 7468594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 20707855 - 20708014
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||  ||||| ||||||||||| | ||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||    
T  20707855 catcataaaaattcttcaaatcccgacaaatgggtagatctccacaacataaataaatccaagataaacaatctagaataatcataa-gacagacatcct 20707953  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaa 200  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||    
T  20707954 agatcagagcctatcctaagacactaaggaaacgataacggagagagctcccgctatccaa 20708014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 296
Target Start/End: Original strand, 25607962 - 25608233
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaa----tctagaataatcataaagaca 131  Q
    |||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||||||| || | ||||||||||||    ||||||||||||||||  |||    
T  25607962 acatcatcatatcaattctccaaatcccgacaattgggcaaatcttcacaacataaacaagtccagaataaacaaacaatctagaataatcataagtaca 25608061  T
Q  132 gacatcctagatcagagcctaccct-aagactctaaggaaacgataacagagatagctcccgctatccaagcaa--------ctcaccgaaagcaaacta 222  Q
     ||||||||||||| |||||||  | ||||||| ||  |||||||||| |||||||||||||||||||||||||        | |||| |||||||||||    
T  25608062 tacatcctagatcatagcctacatttaagactccaaa-aaacgataacggagatagctcccgctatccaagcaatcaccaagcacaccaaaagcaaacta 25608160  T
Q  223 atcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||| | ||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  25608161 atcttgcacgccgtctacccattcatacaaacaggtaggcggtccatgacagatccact--gggtaagcttcaca 25608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 265
Target Start/End: Original strand, 17499921 - 17500143
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||||||||  |||| | ||||||||| ||||||||||||| ||||||| | ||||||||| ||||||||||||  ||||   || |||    
T  17499921 acatcatcatataaattctccgaatcccaacaaatgggtaaatctccacaacgtaaataagt-cagaataaataatctagaataaatataa---cataca 17500016  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||  |||| |||||||||| |||  ||    
T  17500017 tcctagatcagagcctatcctaagattctaaggaaacgataacggagatagctcccgctatccaagcaac-cacc--aagc-aactaatcctgcacttcg 17500112  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||| || ||| | ||||||||||||    
T  17500113 tctacccatccatacagataggtaggcggtc 17500143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 162
Target Start/End: Complemental strand, 18043262 - 18043137
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  18043262 acatcatcataaagattctccaaatcccgacaaatgagcaaatctccacaacataaataaatccagaacaaacaatctagaataatcat-aagacagaca 18043164  T
Q  136 tcctagatcagagcctaccctaagact 162  Q
    ||||||||||||| ||||||| |||||    
T  18043163 tcctagatcagagtctaccctgagact 18043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 92 - 265
Target Start/End: Original strand, 24237146 - 24237318
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcc 190  Q
    |||||| ||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |  ||| |||||||||| ||||||||||     
T  24237146 ataaatccagcataatcaatctagaatagtcataaagacagacatcctagatcagagcctactctaagacccaaaagaaaacgataacggagatagctca 24237245  T
Q  191 cgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||| || |||||||  |||||||||| |||| ||| ||||||||||||||| ||||||||||||| ||||    
T  24237246 cgctatccaggc-actcacc--aagcaaactactcctgcactccgtctacccattcatacaaacaggtaggtggtc 24237318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 99 - 296
Target Start/End: Original strand, 23879077 - 23879279
Alignment:
Q  99 cagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccgctatc 197  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |  ||| ||||||||||  ||||||||||| |||||    
T  23879077 cagaataatcaatctagaataatcatacagacagacatcctagatcagagcctactctaagacccaaaagaaaacgataacgtagatagctcccactatc 23879176  T
Q  198 caagcaactcacc--gaaag---caaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagct 291  Q
    ||||| |||||||  | |||   |||||||||| | ||| ||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| ||||    
T  23879177 caagc-actcaccaagcaagcaacaaactaatcttgcacaccgtctacccattcatacaaataggtaggcggtccaccaca-aaccactaggggttagct 23879274  T
Q  292 tcaca 296  Q
    |||||    
T  23879275 tcaca 23879279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 262
Target Start/End: Original strand, 24906046 - 24906227
Alignment:
Q  94 aaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactcta-aggaaacgataacagagatagctcccg 192  Q
    |||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||    
T  24906046 aaatccagcataaacaatctagaataatcataaagacaaatatcctagatcagagcctaccccaagactcaagaggaaacgataacggagatagctcccg 24906145  T
Q  193 ctat-----------ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcg 262  Q
    ||||           |||||||||||||| || ||||||||||||| |||  |||||||||||||| |||||||||||||||    
T  24906146 ctatccaagcaatccccaagcaactcaccaaatgcaaactaatcctgcacttcgtctacccattcatacaaacaggtaggcg 24906227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 78 - 294
Target Start/End: Complemental strand, 19334105 - 19333878
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctacc-ctaagactctaaggaaacgat 175  Q
    |||||| ||||||||||||| ||| ||| |||||||| ||||| ||||||| ||| ||||||||||||||||||||   ||||||||| ||| |||||||    
T  19334105 tctccaaaacataaataaatccaggatagacaatctataataaatcataaa-aca-acatcctagatcagagcctaaatctaagactccaag-aaacgat 19334009  T
Q  176 aacagagatagctcccgctatccaagcaa-----------ctcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcgg 263  Q
    ||  |||||||||||||||||||||||||           ||||||||||||||||||||||| |||  ||||||||||| || ||| |||||||||||     
T  19334008 aatggagatagctcccgctatccaagcaatcaccaagcaactcaccgaaagcaaactaatcctgcacttcgtctacccatccatacagacaggtaggcga 19333909  T
Q  264 tccatcacagatccactaggggtaagcttca 294  Q
    ||||||||||||||||||||||||| |||||    
T  19333908 tccatcacagatccactaggggtaaacttca 19333878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 22319816 - 22319936
Alignment:
Q  168 gaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtcc 266  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||    
T  22319816 gaaacgataacggagatagctcccgctatccaagcaa-tcagcgaaagcaaactaatcctgcacgccgtctacccattcatataaacaggtaggcgg-cc 22319913  T
Q  267 atcacagatccactaggggtaag 289  Q
    |||| ||||||||| ||||||||    
T  22319914 atcatagatccactgggggtaag 22319936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 109 - 265
Target Start/End: Complemental strand, 18263438 - 18263287
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactca 208  Q
    |||||||||||||||||||  |||||| |||||||||||| ||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  18263438 aatctagaataatcataaa--cagaca-cctagatcagagtctatccta-gactctaaggacacgataacggagatagctcccgctatccaagcaactca 18263343  T
Q  209 ccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    || ||||| |||||| ||| |||  ||||||||||| || ||| ||||||||||||||    
T  18263342 cc-aaagc-aactaaccctgcacttcgtctacccatccatacagacaggtaggcggtc 18263287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 24266058 - 24266223
Alignment:
Q  36 acatcatcataaaaattctct-aaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| |||||||||  ||||| |||||| |||| ||||||||| ||||||| ||||| || || | | |||||||||||||||||||  |||||    
T  24266058 acatcatcatcaaaattctccgaaatctcgacaactgggtaaatctccaaaacataa-taaatccacaacagataatctagaataatcataaa--cagac 24266154  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
      ||||||||| |||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  24266155 g-cctagatcaaagcctatccta-gactctaaggacacgataacggagatagctcccgctatcaaagcaac 24266223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 22311276 - 22311365
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactagggg 285  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||    
T  22311276 ccaagcaactcaccgaaagaaaactaatcatgcacgccgtctacccattcatacaaacaggtagccggttcatcacagatccactcgggg 22311365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 22883922 - 22884060
Alignment:
Q  122 cataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaac 220  Q
    ||||||||| ||| ||||| |||||||||||  ||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||| |||| ||||    
T  22883922 cataaagaccgacgtccta-atcagagcctaatctaagactctaag-aaacgataacagagattagctcccactatccaagca-ctcaccaaaagtaaac 22884018  T
Q  221 taatcctacacgccgtctacccattca-acaaacaggtaggc 261  Q
    || |||| ||| | ||||||||||||| ||||||||||||||    
T  22884019 tactcctgcactctgtctacccattcatacaaacaggtaggc 22884060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 23350317 - 23350445
Alignment:
Q  131 agacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctaca 230  Q
    |||||||||| |||||||||||| ||||||||| |  ||||||||||| ||||||||| ||| ||||||||| |||||||  |||||||||| |||| ||    
T  23350317 agacatcctaaatcagagcctactctaagactcaacagaaacgataacggagatagcttccgttatccaagc-actcacc--aagcaaactactcctgca 23350413  T
Q  231 cgccgtctacccattcaacaaacaggtaggcg 262  Q
    | |||||||||||||||  ||| |||||||||    
T  23350414 caccgtctacccattcataaaaaaggtaggcg 23350445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 11600253 - 11600351
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||  |||| ||||| ||||||||||||| |||||| ||||||||||| || | ||| ||||||||||||||| ||||||||||||||||||    
T  11600253 gaaacgataacgaagattagctctcgctatccaagca-ctcaccaaaagcaaactactcatgcactccgtctacccattcatacaaacaggtaggcggtc 11600351  T

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Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 21234091 - 21233974
Alignment:
Q  86 acataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagat 184  Q
    |||||||||||| ||| ||| |||||||| ||||| | |||| |||| ||||||||||| ||||| || | || ||||||| |||| ||||||| |||||    
T  21234091 acataaataaatccaggatagacaatctataataaattataa-gaca-acatcctagattagagcttatcatacgactctacggaaccgataacggagat 21233994  T
Q  185 agctcccgctatccaagcaa 204  Q
    ||||||||||||||||||||    
T  21233993 agctcccgctatccaagcaa 21233974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 25293761 - 25293849
Alignment:
Q  199 aagcaactcaccgaaagcaaactaatcctacacgccgtctacccattcaacaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||| |||| |||||||| |||  |||||||||||   ||| ||||||||||||||||||||||||||||| ||||||||    
T  25293761 aagcaactcaccgaa-gcaa-ctaatcctgcacaacgtctacccatcatacagacaggtaggcggtccatcacagatccactgggggtaag 25293849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 25755750 - 25755838
Alignment:
Q  199 aagcaactcaccgaaagcaaactaatcctacacgccgtctacccattcaacaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||| |||| |||||||| |||  |||||||||||   ||| ||||||||||||||||||||||||||||| ||||||||    
T  25755750 aagcaactcaccgaa-gcaa-ctaatcctgcacaacgtctacccatcatacagacaggtaggcggtccatcacagatccactgggggtaag 25755838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 16000334 - 16000455
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||||| |||  ||||||||| ||||| |||| |||||||||||||| |||| | ||| ||||||| |||| ||| ||||||||    
T  16000334 atcagagcctaatctaagactccaag--aacgataacggagattagcttccgctatccaagca-ctcatcaaaaacaaactactcctgcactccgtctac 16000430  T
Q  241 ccattca-acaaacaggtaggcggt 264  Q
     |||||| |||||||||||||||||    
T  16000431 acattcatacaaacaggtaggcggt 16000455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 646031 - 645975
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  646031 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 645975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 831766 - 831710
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||  |||||||    
T  831766 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgngggtaag 831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 269890 - 269945
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  269890 cgtctacccatccatacagacaggtaggcggtccatcacagatccact-ggggtaag 269945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 26009496 - 26009651
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| ||||||| ||||| || || ||||||||||| |||||||  |||||| ||||||| || || | | ||||||| ||||||||||  ||||||     
T  26009496 acatcaacataaaatttctccaagtcccgacaaatgggtaaatctc--caacatgaataaatccaaaacagataatctag-ataatcataa--acagac- 26009589  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatcc 198  Q
     |||||||| ||||||| ||| |||||||| | ||  |||| ||||||||||||||| |||||    
T  26009590 gcctagatctgagcctatcct-agactctacgaaactgataccagagatagctcccgatatcc 26009651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 41509183 - 41509127
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||  |||||||    
T  41509183 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgagggtaag 41509127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 29295973 - 29296104
Alignment:
Q  67 aaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaa 166  Q
    ||||||| |||||| || ||||| ||||||| || || | | |||||||| ||||||||||  |||||| |||||||||||||||| | || ||| ||||    
T  29295973 aaatgggtaaatcttca-aacatgaataaatccaaaacagataatctaga-taatcataaa--cagaca-cctagatcagagcctatcata-gaccctaa 29296066  T
Q  167 ggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | | |||||| | ||||||||||||||||||||||||||    
T  29296067 g-acacgatagcggagatagctcccgctatccaagcaac 29296104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 18120344 - 18120265
Alignment:
Q  217 aaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||| ||| || | |||||| ||||||| ||||| |||||||||||||| |||||| ||||| ||||| |||||||||    
T  18120344 aaactaaacctgcatgtcgtctaaccattcatacaaataggtaggcggtccaccacaga-ccactgggggttagcttcaca 18120265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 23509007 - 23509063
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||||||||||||||| ||||||||    
T  23509007 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 23509063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 36 - 296
Target Start/End: Complemental strand, 6817743 - 6817483
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  6817743 acatcatcatataaattctccaaatcccgacaaatgggcaaatcttcacaacataaataaatccaaaataaacaatctagaataatcataaagactgaca 6817644  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||| |||||||| ||||| |||||||||| |||||||    
T  6817643 tcctagatcagagcctaccctaagactctaagcaaacgataatggagatagctccagctatccaagaaactcaccaaaagc-aactaatcctgcacgccg 6817545  T
Q  236 tctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6817544 tctacccattcatacaaacaggtaggcggtccatcaaagatccactaggggtaagcttcaca 6817483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 36 - 296
Target Start/End: Complemental strand, 17760914 - 17760653
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  17760914 acatcatcatataaattctccaaatctcgacaaattggcaaatctcaacaacataaataaatccataataaacaatctagaataatcataaagacagaca 17760815  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||    
T  17760814 tcctagatcagagcctagcctaagactctaaggaagcgataacgaagatagctcccgctatgcaagcaactcaccaaaaacaaactaatcctgcacgccg 17760715  T
Q  236 tctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    |||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  17760714 tctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 17760653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 36 - 296
Target Start/End: Complemental strand, 19062234 - 19061973
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  19062234 acatcatcatataaattctccaaatctcgacaaattggcaaatctcaacaacataaataaatccataataaacaatctagaataatcataaagacagaca 19062135  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||    
T  19062134 tcctagatcagagcctagcctaagactctaaggaagcgataacgaagatagctcccgctatgcaagcaactcaccaaaaacaaactaatcctgcacgccg 19062035  T
Q  236 tctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    |||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  19062034 tctacccattcatacaaataggtaaccggtccatcacagatccactaggggtaagcttcaca 19061973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 296
Target Start/End: Complemental strand, 15552006 - 15551746
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||    
T  15552006 acatcatcatataaattctctaaatcccgacaaatgggcaaatctccacaacataaataagtctagaataaacaatctagaataatcataaagacaaaca 15551907  T
Q  136 tcctagatcagagcct-accctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgcc 234  Q
    |||||||||||||||| |  ||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||| | | | |||||||| |||||  |    
T  15551906 tcctagatcagagcctaaatctaagactccaa-gaaacgataacggagatagctcccggtatccaagcaactcaccaacaac-aactaatcatacacttc 15551809  T
Q  235 gtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  15551808 gtctacccatccatacagacaggtaggcggtccatcacagatccacagggggtaagcttcaca 15551746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 5230722 - 5230554
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||| |||| ||||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  5230722 acatcatcatataaaatctccaaatcccgacaaatgggtaaatctccacaacataaataaatatagaataaacaatctagaataatcataaagacagaca 5230623  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  5230622 tcctagatcagagcctaccctaagactcaaaggaaacgataatggagatagctcccgttatccaagcaa 5230554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 17320684 - 17320521
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  17320684 catcataaaaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccaaaataaacaatctagaataatcat-aagacagacatcct 17320586  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||  |||||||||||    
T  17320585 agatcagagcctaccctaggactctaaggaaacgacaacggagatagctcccaatatccaagcaa 17320521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 43429648 - 43429481
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||    
T  43429648 acatcatcataaaaattctccaaatcccaacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatc-ttaagacataca 43429550  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| |||||||||||    
T  43429549 tcctagatcagagcctaccctaagactctaaggaaacaataacggagatatctcccgatatccaagcaa 43429481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 36 - 265
Target Start/End: Original strand, 41659679 - 41659904
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||| || ||||||||||||||| |||||||||| |||||||    
T  41659679 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaatataaataaatccaaaataaacaatctagagtaatcataaa-acagaca 41659777  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
     |||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  | ||||||| |||  ||    
T  41659778 -cctagatcagagtctatcct-agactctaaggaaacgataacggagatagctcccgctatccaagcaactcacc-aaagc-gattaatcctgcacttcg 41659873  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||| || ||| ||||||||||||||    
T  41659874 tctacccatccatacagacaggtaggcggtc 41659904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 31416312 - 31416181
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataa 177  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||| ||||| || |||||||||||||||||| |||||    
T  31416312 tctccacaacataaataaatctagaataaacaatctagaataattataa-gacagacatcctagattagagcatatcctaagactctaaggaaatgataa 31416214  T
Q  178 cagagatagctcccgctatccaagcaactcacc 210  Q
    |||||||||||||||||||||||||||||||||    
T  31416213 cagagatagctcccgctatccaagcaactcacc 31416181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 21168814 - 21168643
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||| ||||| ||||||| ||||||||||    
T  21168814 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaacataaataaatccacaataaacaacctagagtaatcat-aagacagaca 21168716  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcacc 210  Q
     |||||||| ||| ||| ||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21168715 -cctagatcggagtctatcct-agactttaaggaaacgataacggagataactcccgctatccaagcaactcacc 21168643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 94 - 265
Target Start/End: Original strand, 15988645 - 15988829
Alignment:
Q  94 aaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccg 192  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||| |||||||||| ||||||||||||     
T  15988645 aaatccagcataaacaatctagaataatcataaaggcagacatcctagatcagagcctaccctatgactcaaaagaaaacgataacggagatagctccca 15988744  T
Q  193 ctatccaagc-----------aactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||           ||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||    
T  15988745 ctatccaagcaatcaccaagaaactcaccgaaagcaaactaatcctgcacttcgtctacccattcatacaaacaggtaggcggtc 15988829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 25106394 - 25106222
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcc 190  Q
    |||||| ||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||  ||| ||||||||||  |||||| |||    
T  25106394 ataaatccagcataatcaatctagaataatcacaaagacaaacatcctagatcagagcctactctaagactcaaaagaaaacgataacgaagatagatcc 25106295  T
Q  191 cgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    | |||||||||| |||||||  |||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||    
T  25106294 ctctatccaagc-actcacc--aagcaaactactcctgcactccgtctacccattcacacaaacaggtaggcggtc 25106222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 95 - 265
Target Start/End: Complemental strand, 11517503 - 11517334
Alignment:
Q  95 aattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccgc 193  Q
    ||||||| ||||  ||||||||||||||||  | ||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||||||||||| |    
T  11517503 aattcagcataattaatctagaataatcatggaaacagacatcctagatgagagcctaccctaagactcaaaagaaaacgataacggagatagctcccac 11517404  T
Q  194 tatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
     |||||||| |||||||  ||| |||||| || | |||  |||||||||||||| ||||||||||| ||||||    
T  11517403 catccaagc-actcacc--aagaaaactactcatgcacttcgtctacccattcatacaaacaggtatgcggtc 11517334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 18968148 - 18968305
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    |||||||||||| ||||| |||||| ||||||||||||||  |||||||||||| || || ||| |||||||| |||||||||  ||||||| |||||||    
T  18968148 ataaaaattctccaaatcccgacaagtgggcaaatctccaacacataaataaatccacaacaaataatctagagtaatcataa--acagaca-cctagat 18968244  T
Q  144 cagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||| || ||| |||||||||||| |||| ||  ||||||||||||| | || |||||||    
T  18968245 cagagcatatcct-agactctaaggacacgacaatggagatagctcccgttgtctaagcaac 18968305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 10902659 - 10902757
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||| ||  ||||||||||||||| ||||||||||||||||||    
T  10902659 gaaacgataacggagattagctcccgctatccaagca-ctcaccaaaagcaaactactcctgcattccgtctacccattcatacaaacaggtaggcggtc 10902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 14819882 - 14819791
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||| |||||||||| |  |||||| |||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  14819882 aatctagattaatcataaata--gacatc-tagatcagagcctatccta-gactctaaggacacgataacggagatagctcccgctatccaagcaa 14819791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 4164354 - 4164189
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||| | ||||||| ||  |||| || | | |||||||||||||||||||  |||||    
T  4164354 acatcatcattaaaattctccaaaatcccgacaattgggtaaatctctaaaacataa-taggttcacaacagataatctagaataatcataaa--cagac 4164258  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||||||||||| ||| |||| ||||||| ||| |||||||| ||||||| |||| |||||||||||||    
T  4164257 a-cctagatcagagtctatccta-gactctacggacacgataacggagatagttcccactatccaagcaac 4164189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 6230768 - 6230603
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||||| ||||||| ||  | || || | | |||||||||||||||||||  |||||    
T  6230768 acatcatcatcaaaattctccaaaatcccgacaattgggtaaatctccaaaacataa-tatgtccacaacagataatctagaataatcataaa--cagac 6230672  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | | || ||||||||||| |||| |||||||  || |||||||| ||||||||||||||||||||||||||    
T  6230671 a-catatatcagagcctatccta-gactctacagacacgataacggagatagctcccgctatccaagcaac 6230603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 17391132 - 17391191
Alignment:
Q  103 ataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagact 162  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  17391132 ataatcaatctcgaataatcataaagacaaacatcctagatcagagcctactctaagact 17391191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 12490749 - 12490677
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||    
T  12490749 aactaatcctgcacaacgtctacccatccatacaaacaggtaggtggtccatcacagatccactgggggtaag 12490677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 4147802 - 4147637
Alignment:
Q  36 acatcatcataaaaattctct-aaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||| ||||| |||||||||  ||||| |||||| |||| ||||||||| ||||||| ||  | || || | | ||||||||||||||||||| |  |||    
T  4147802 acattatcatcaaaattctccgaaatcccgacaattgggtaaatctccaaaacataa-taggtccacaacagataatctagaataatcataaata--gac 4147706  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||||||||||| ||| |||| |||||||  || |||||||| |||||||||||||||||| |||||||    
T  4147705 a-cctagatcagagtctatccta-gactctactgacacgataacggagatagctcccgctatctaagcaac 4147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 38378250 - 38378152
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||| ||||| ||| | |||| ||| |||||||| |||||| |||||| |||||||||||    
T  38378250 gaaacgataacggagattagctcccgctatccaagc-actcaccaaaagctaaccactcctgcactccgtctactcattcatacaaacgggtaggcggtc 38378152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 33371474 - 33371311
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||| ||||  || || |||||||| || ||||||||| ||||| ||||||| || || | | |||||||| ||||||||||  || |||    
T  33371474 acataatcataaaagttcttcaagtcccgacaaattggtaaatctcca-aacatgaataaatccaaaacagataatctagagtaatcataaa--caaaca 33371378  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     ||||||||| |||||| ||||  |||||||| | |||||| | ||||||||||||||||||||||||||    
T  33371377 -cctagatcatagcctatcctat-actctaag-acacgatagcggagatagctcccgctatccaagcaac 33371311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 14182346 - 14182277
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||||||| ||||||| |||| ||  |||||||||||||| |||||||| |||||||||    
T  14182346 ccaagcaactcaccgaaaggaaactaaccctatacttcgtctacccattcatacaaacagataggcggtc 14182277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 7851623 - 7851678
Alignment:
Q  235 gtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  7851623 gtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 12950851 - 12950888
Alignment:
Q  252 acaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  12950851 acaggtaggcggtccatcacagatccactgggggtaag 12950888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 8602472 - 8602579
Alignment:
Q  155 ctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaac 253  Q
    ||||||||| ||| |||||||||| |||||||||||||||||  |||||| |||||  ||||| ||||||||| |||  ||||||||||| || ||| ||    
T  8602472 ctaagactccaag-aaacgataacggagatagctcccgctataaaagcaa-tcacc--aagcagactaatcctgcacttcgtctacccatccatacagac 8602567  T
Q  254 aggtaggcggtc 265  Q
    |||||| |||||    
T  8602568 aggtagacggtc 8602579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 38813318 - 38813262
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| |||||||||| |||||||| ||||||||||||||||||    
T  38813318 cgtctacccatacatacagacaggtaggcagtccatcatagatccactaggggtaag 38813262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 20419017 - 20419071
Alignment:
Q  230 acgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggg 284  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||| |||||||||    
T  20419017 acgccgtctacccattcatacaaataggtaggcggtccaccacaga-ccactaggg 20419071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 14968079 - 14968121
Alignment:
Q  224 tcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  14968079 tcctacacgccgtctacccattcatacaaacaggtagacggtc 14968121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 11381040 - 11381077
Alignment:
Q  252 acaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  11381040 acaggtaggcggtccatcacagatccactggaggtaag 11381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 22637393 - 22637430
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatggg 73  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  22637393 acatcatcataaaaattctccaaatcccgacaaatggg 22637430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 48419905 - 48419950
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatcca 278  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||    
T  48419905 cgtctacccatccatacagacaggtaggcggtccatcacagatcca 48419950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 17936394 - 17936450
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||||||||||||||| ||||||||    
T  17936394 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 17936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 19944744 - 19944800
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||||||| ||||||||||||||||    
T  19944744 cgtctacccatccatacagataggcaggcggtccatcacatatccactaggggtaag 19944800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 40041550 - 40041455
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcg 262  Q
    |||||||||||  |||| |||||| ||||| |||||| |||||| ||| ||||||| |||| ||| | ||||||||||||| ||||||| |||||||    
T  40041550 gaaacgataacgaagattagctcctgctattcaagca-ctcaccaaaaacaaactactcctgcactcggtctacccattcatacaaacaagtaggcg 40041455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 6092519 - 6092722
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6092519 catcataaaaattctccaaatcccgacaaatgggcaaatctccgcaacataaataaatccagaataaacaatctagaataatcataaagacagacatcct 6092618  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtcta 239  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| | |||  ||||||    
T  6092619 agatcagagcctaccct-agactctaaggaaacgataacggagatagctcccgctatccaagcaactcaccaaaagcaaactaatcatgcacttcgtcta 6092717  T
Q  240 cccat 244  Q
    |||||    
T  6092718 cccat 6092722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 25132286 - 25132449
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  25132286 catcataaaaattctccaaatcccgtcaaatgggcaaatctccacaatataaataaatccaaaataaacaatctagaataatcat-aagacagacatcct 25132384  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  25132385 agatcggagcctatcctaagactgtaaggaaacgataacggagatagctcccgctatccaagcaa 25132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 24272112 - 24272277
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||||||||| || ||||||| ||||||| ||||||| |||||| |||    
T  24272112 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctctaaaacataaataaatccaaaataaacgatctagagtaatcat-aagacaaaca 24272210  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     |||||||||||| ||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  24272211 -cctagatcagagtctatcct-agactctaaggaaacgataacggagatagcacccgctatccaagcaa 24272277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 45620498 - 45620292
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctccc 191  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || | | ||||||| ||||||||||||    
T  45620498 ataaatccagcataatcaatctagaataatcataaagacagacatcctagatcagagcctactttaagactcaaaag-atcgataacggagatagctccc 45620400  T
Q  192 gctatccaagcaactcacc--gaaagca--aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggt 286  Q
    ||||||  ||| |||| ||  | || ||  ||||| |||| ||| ||||||||||||||| ||||| |||||||||||||| |||||| |||||  ||||    
T  45620399 gctatctgagc-actccccaagcaatcaacaactactcctgcacaccgtctacccattcatacaaataggtaggcggtccaccacaga-ccactgagggt 45620302  T
Q  287 aagcttcaca 296  Q
     |||||||||    
T  45620301 tagcttcaca 45620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 23614582 - 23614457
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||   ||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||| ||||||||||||| | |||  |||||||    
T  23614582 atcagagcctaatttaagactctaaagaatcggtaacagagattagctcccgctatccaagcaactcaccggaagcaaactaatcatgcacttcgtctac 23614483  T
Q  241 ccattca-acaaacaggtaggcggtc 265  Q
    ||||||| ||||| ||||||||||||    
T  23614482 ccattcatacaaaaaggtaggcggtc 23614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 25593352 - 25593450
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  25593352 gaaacgataacagagattagctcctgctatccaagca-ctcaccaaaagcaaactactcctacactccgtctacccattcatacaaacaggtaggcggtc 25593450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 30995090 - 30994937
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| | ||||||||||||||||| |||||| |||| |||||||||||   ||||||||| || ||| ||||||||||||            | ||||    
T  30995090 acatcaacctaaaaattctctaaatcccgacaattgggaaaatctccaca---taaataaatccaaaatgaacaatctagaa------------ccgaca 30995006  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||| |||| ||||||||| || ||||| | |||||| |||||| |||||||||||    
T  30995005 tcctagatcagagcctatcctacgactctaagaaaccgatatcggagataactcccgatatccaagcaa 30994937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 18533512 - 18533634
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||||| ||| || ||||||| ||||| | |||||||||||||||||| ||||| |||||||| || |||| ||| | ||||||    
T  18533512 atcagagcctaatctaagactccaag-aaccgataacggagattaactcccgctatccaagcaa-tcaccaaaagcaaaatactcctgcactctgtctac 18533609  T
Q  241 ccattca-acaaacaggtaggcggt 264  Q
    ||||||| |||||||||||||||||    
T  18533610 ccattcatacaaacaggtaggcggt 18533634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 43640582 - 43640675
Alignment:
Q  200 agcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| || ||| | |||||||||||||||||||||||||||  ||||||||||||||    
T  43640582 agcaactcacc-aaagcaa-ctaatcctgcacaacgtctacccatccatacagataggtaggcggtccatcacagatccact--gggtaagcttcaca 43640675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 29111996 - 29112061
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggc 261  Q
    ||||||||||||||||||||||||||||| | |||  ||||||| |||||| ||||||||| ||||    
T  29111996 ccaagcaactcaccgaaagcaaactaatcatgcacttcgtctacgcattcatacaaacaggcaggc 29112061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 19435877 - 19435787
Alignment:
Q  198 caagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||| ||||||| |||||||| |||  ||||||||||| || | | ||||||||||||||||||| ||||||| | ||||||||    
T  19435877 caagcaactcacc-aaagcaa-ctaatcctgcacaacgtctacccatccatatagacaggtaggcggtccatcatagatccattgggggtaag 19435787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 19648243 - 19648310
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||| ||||||| ||| |||| ||| ||||||| |||||| | ||||||||||||||||||||||||||    
T  19648243 cctatatcagagtctatccta-gaccctaaggacacgatagcggagatagctcccgctatccaagcaac 19648310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 24089371 - 24089289
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccact 280  Q
    |||||||||||||| ||||||| |||||||| |||  | ||||||||| || ||| ||| |||||||||||||||||||||||||    
T  24089371 ccaagcaactcacc-aaagcaa-ctaatcctgcacaacatctacccatccatacatacatgtaggcggtccatcacagatccact 24089289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 24089440 - 24089374
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||||||||||||| |||| ||||||||| | | |||| | ||||||||||||||||||||||||||    
T  24089440 cctagatcagagcctatccta-gactctaag-acatgatagcggagatagctcccgctatccaagcaac 24089374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 19657708 - 19657781
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagc 290  Q
    |||||| |||||||  |||||||| || || ||| ||||| | ||||||||||||||||||||| |||||||||    
T  19657708 aactaaacctacacaacgtctacctatccatacagacaggcatgcggtccatcacagatccactgggggtaagc 19657781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 32738538 - 32738686
Alignment:
Q  43 cataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctaga 142  Q
    ||||||| ||||| || || ||||||||||| ||| |||  |||||| ||||||| || || | | ||||||| ||||||||||  || |||| ||||||    
T  32738538 cataaaagttctcaaagtcccgacaaatgggtaaaactc--caacatgaataaatccaaaacagataatctag-ataatcataa--accgaca-cctaga 32738631  T
Q  143 tcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatcc 198  Q
    |||||||||| ||| |||||||| | || ||||| | ||||||||||||| |||||    
T  32738632 tcagagcctatcct-agactctacgaaaccgataccggagatagctcccgatatcc 32738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 36 - 296
Target Start/End: Complemental strand, 15216351 - 15216090
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| |||||| |||| || |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  15216351 acatcatcatataaattctccaaatcccgacaattgggaaagtctccacaacataaataagtccagaataaaaaatctagaataatcataaagacagaca 15216252  T
Q  136 tcctagatcagagcctac-cctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgcc 234  Q
    ||||||||||||||||||  ||||||||| || |||  ||||||  |||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  15216251 tcctagatcagagcctacatctaagactccaa-gaagagataacgaagatagctcccgctatccaagcaactcaccgaaaacaaactaatcatgcacgcc 15216153  T
Q  235 gtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||| ||||  ||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  15216152 gtcaaccctatcatacaaacaggtaggcagtccatcacagatccactaggtgtaagcttcaca 15216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 50224266 - 50224038
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  50224266 acatcaacataaaaattctccaaatcccgacaaatggacaaatctccacaacataaataaattcagaataaacaatctagaataatcat-aagacaaaca 50224168  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    |||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||| |||||||| | |||  ||    
T  50224167 tcctagatcagaccctaccctacgactataaggaaacgataacggagatagctcccgatatccaagcaattcaccaaaagc-aactaatcgtgcacttcg 50224069  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||| || ||| ||||||||||||||    
T  50224068 tctacccatccatacagacaggtaggcggtc 50224038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 47470444 - 47470237
Alignment:
Q  36 acatcatcataaaaa-ttctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  47470444 acatcatcataaaaaattctccaaatctcgacaaatgggaaaatctccacaacataaataaatccagagtaaacaatctagaataatcataa-gacagac 47470346  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgcc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||| | |||  |    
T  47470345 atcctagatcagagcctaccctaagactctaaggaaacgataacggagatagcttccgatatccaagcaactcaccaaaagc-aactaatcatgcacttc 47470247  T
Q  235 gtctacccat 244  Q
    ||||||||||    
T  47470246 gtctacccat 47470237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 41919359 - 41919191
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||| |||  ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  41919359 acatcatcatataaaatcttaaaatcccgacaaatgggcaaatatccacaacataaataaatccagaataaacaatctagaataatcataaagacataca 41919260  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    || ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  41919259 tcttagatcagagcctaccctaagactcaaaggaaacaataacggagatagctcccgctatccaagcaa 41919191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 244
Target Start/End: Complemental strand, 13596126 - 13595921
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       
T  13596126 catcataaaaattctccaaatcccgataaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatcataaagacagacat--- 13596030  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaactaatccta 228  Q
           ||||||||||||||||| |||||||||||||| |||||||||||| ||||           |||||||||||||| |||||||||||||||||    
T  13596029 -------agcctaccctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatccta 13595937  T
Q  229 cacgccgtctacccat 244  Q
    |||  |||||||||||    
T  13595936 cacttcgtctacccat 13595921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 94 - 258
Target Start/End: Complemental strand, 54366130 - 54365964
Alignment:
Q  94 aaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaa-ggaaacgataacagagatagctcccg 192  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||| |    
T  54366130 aaatccagcataaacaatctagaataatcataaagacatacatcctagatcagagtctaccctaagactcaaaaggaaacgataacggagatagctcctg 54366031  T
Q  193 ctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggta 258  Q
    |||||||||||||||||| |||||||| ||||||| |||  |||||||||||||| |||||||||||    
T  54366030 ctatccaagcaactcaccaaaagcaaattaatcctgcacttcgtctacccattcatacaaacaggta 54365964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 19557394 - 19557558
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| | | ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||| | |||||| |    
T  19557394 acatcatcataaaaattctccaaatcccaaaaaatgggtaaatctccacatcagaaataaatccagaataaacaatctagaataatcat-atgacagaaa 19557492  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaag 201  Q
    ||||| ||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||    
T  19557493 tcctatatcagagcctatcctaagactctaaggaaacggtaacggagatagctctcgctatccaag 19557558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 10239551 - 10239384
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| ||||||||||||  ||||  |||||| |||| |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||| |||    
T  10239551 acatcaacataaaaattcttcaaattccgacaattgggtaaatctccacaacacaaataaatccaaaataaacaatctagaataatcataa-gacataca 10239453  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  10239452 tcctagatcagagcctatcctaagactctaaggaaacgataacggagataactccctctatctaagcaa 10239384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 24237010 - 24237140
Alignment:
Q  75 aaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacg 173  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||   || |||||    
T  24237010 aaatctccacaacataaataaacccagaataatcaatctagaataatcatacagacagacatcctagatcagagcctactctaagactcagcagaaaacg 24237109  T
Q  174 ataacagagatagctcccgctatccaagcaa 204  Q
    ||||| |||||||||||||||||||||||||    
T  24237110 ataacggagatagctcccgctatccaagcaa 24237140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 17378249 - 17378068
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagc--- 187  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |  ||| |||||||||| ||||||||       
T  17378249 ataaattcagcataatcaatctagaataatcataaagacagacatcctagatcaaagcctactctaagacccaaaagaaaacgataacggagatagccta 17378150  T
Q  188 tc-ccgctat--ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||   || ||  ||||||||||||||||||||||||||||||  |||  |||||||||||| | ||||||||||||||||||    
T  17378149 tctaagcaatcaccaagcaactcaccgaaagcaaactaatcccgcacttcgtctacccattgatacaaacaggtaggcggtc 17378068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 19624142 - 19623919
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||| |||| ||||| ||||| ||||  ||||||||| |||||||||     ||| |||| ||||||||||||||||||||||||||||    
T  19624142 acatcatcatataaaatctccaaatcccgacatatggtaaaatctccataacataaatc----cagcataatcaatctagaataatcataaagacagaca 19624047  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagc-aaactaatcctacacgcc 234  Q
    |||||||||| ||||||| ||||||||| || | | |||||||  ||||||||||| |||||||||  |||||||  |||| |||||| |||  ||| ||    
T  19624046 tcctagatcaaagcctactctaagactcgaaag-accgataacgaagatagctccctctatccaag-tactcacc--aagcaaaactactccggcactcc 19623951  T
Q  235 gtctacccattca-acaaacaggtaggcggtc 265  Q
     |||||||||||| ||||||||||||| ||||    
T  19623950 atctacccattcatacaaacaggtaggtggtc 19623919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 5373069 - 5372971
Alignment:
Q  198 caagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||||| ||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  5373069 caagcaactcaccaaaagcaaactagtcatgcacgccgtctacccattcatacaaacaggtaggcggtccatcacatatctact-ggggtaagcttcaca 5372971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 296
Target Start/End: Original strand, 14569533 - 14569728
Alignment:
Q  103 ataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagc 202  Q
    |||| |||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| || || | | |||||||  |||||||||||||||||| |||    
T  14569533 ataatcaatctagaacaatcataaagacaaacatcctagattagagcctactctaagattccaaag-accgataacgaagatagctcccgctatccgagc 14569631  T
Q  203 aactcacc--gaaagca--aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
     ||| |||  | || ||  ||| | |||| ||||||||||||||||||| ||||| |||||||||||||| |||||| ||| | ||||| |||||||||    
T  14569632 -acttaccaagcaaccaacaacaactcctgcacgccgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcaca 14569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 41258385 - 41258293
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||||| ||||||||||  |||||| |||||||||||||||| |||| ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  41258385 aatctagagtaatcataaa--cagaca-cctagatcagagcctatccta-gactctaaggacacgatagcggagatagctcccgctatccaagcaac 41258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 12732375 - 12732473
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||| ||| |||||||| |||||| ||||||||||||||||||    
T  12732375 gaaatgataacggagattagctcccgctatccaagca-ctcaccaaaagcaaactactcctgcactccgtctactcattcatacaaacaggtaggcggtc 12732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 13449109 - 13448984
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| ||||||||| ||||||| ||| |||||||| ||||| |||||| |||| |||||||||||||||||||| | || ||||||| | ||   |||    
T  13449109 tctccaaaacataaatgaattcaggatagacaatctataataaatcataa-gaca-acatcctagatcagagcctatcttacgactctacgaaactaata 13449012  T
Q  177 acagagatagctcccgctatccaagcaa 204  Q
    ||| ||||||||||||||||||||||||    
T  13449011 acatagatagctcccgctatccaagcaa 13448984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 18241297 - 18241131
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| |||||| || ||| || |||||| |||| |||| || | |||||||| ||||||| || | | |||||| | ||||||||||  |||||    
T  18241297 acatcatcatcaaaattttccaaaatcccgacaactgggtaaatatctaaaacataaaaaaattcacaaaagataatctaaagtaatcataaa--cagac 18241200  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||| ||||||||||| | || ||||||| ||| | |||||| ||||||||||| ||||||||||||||    
T  18241199 a-cctaaatcagagcctatctta-gactctatggacatgataacggagatagctcctgctatccaagcaac 18241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 12136239 - 12136170
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||| |||||||||||||||| |||  ||||||||||| || ||| ||||||||||||||    
T  12136239 ccaagcaactcaccaaaagcaaactaatcctgcacttcgtctacccatccatacagacaggtaggcggtc 12136170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 7187941 - 7187875
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||| |||| ||| |||| || |||||||| ||||||||| |||||||||||||||    
T  7187941 cctagatcagagcctatccta-gaccctaaagacacgataacggagatagctgccgctatccaagcaa 7187875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 5407307 - 5407374
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaa-cgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||| ||| |||||||||||||| ||||| | ||||||||||| | |||||||||||    
T  5407307 cctagatcagagcctatcct-agactctaaggaaaccgataccggagatagctcctgatatccaagcaa 5407374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 43283354 - 43283298
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||| ||| ||||||||    
T  43283354 cgtctacccatccatacagacaggtaggcggtccatcacagatctactgggggtaag 43283298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 5373136 - 5373074
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaa 204  Q
    |||||||||||  ||||||||| ||| |||||||||||||||| |||| |||||||||||||||    
T  5373136 atcagagcctaatctaagactccaag-aaacgataacagagattagcttccgctatccaagcaa 5373074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 12136312 - 12136243
Alignment:
Q  133 acatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||| |||||||||||  ||||||||| ||| | |||||||| ||||||||| |||||||||||||||    
T  12136312 acatccta-atcagagcctaatctaagactccaag-atacgataacggagatagcttccgctatccaagcaa 12136243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 19082978 - 19082904
Alignment:
Q  122 cataaagacagacatcctagatcagagcctaccctaagactctaaggaaacga-taacagagatagctcccgctatcc 198  Q
    ||||||||| ||||||||| |||||||||||  ||||||||| ||  |||||| |||| |||||||||||||||||||    
T  19082978 cataaagactgacatccta-atcagagcctaatctaagactccaa--aaacgaataacggagatagctcccgctatcc 19082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 10642313 - 10642369
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||| ||||||||||||||||||||||||||||    
T  10642313 cgtctacccatccatacagataggcaggtggtccatcacagatccactaggggtaag 10642369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 15211438 - 15211510
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| | | | |||||||||| |||||||||||||||||||||    
T  15211438 aactaatcctgcacaacgtctacccatccatacagataagcaggcggtccagcacagatccactaggggtaag 15211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 34393324 - 34393380
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||||||| | ||||||    
T  34393324 cgtctacccatccatacagacaggtaggcggtccatcatagatccactggaggtaag 34393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 55378825 - 55378769
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||||||||||||||| ||||||||    
T  55378825 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 55378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 36 - 267
Target Start/End: Complemental strand, 41213769 - 41213540
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  41213769 acatcatcataaaaattctccaaatcccgacaaatgggcaaatctccataacataaataaatccagaataaacaatctagaataatcgt-aagacagaca 41213671  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||||||||| | |||| |||||||||| |||  ||    
T  41213670 tcctagatcagagcctaccctaagactcaaagtaaacgataacggagatagctctcgctatccaagcaactcactg-aagc-aactaatcctgcacttcg 41213573  T
Q  236 tctacccattca-acaaacaggtaggcggtcca 267  Q
    ||||||||| || ||| ||||||||||||||||    
T  41213572 tctacccatccatacagacaggtaggcggtcca 41213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 33383989 - 33384151
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||  ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33383989 catcataaaaattctccaaattccgacaaatgggcaaatctccgaaacataaataaatccagaataaacaatctagaataatcataaagacagacatcct 33384088  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagc 202  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33384089 agatcagagcctaccctaagactctaaggaaacgataacggagatagctcccgctatccaagc 33384151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 40 - 265
Target Start/End: Complemental strand, 5770302 - 5770079
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| |||||||    
T  5770302 catcataaaaattctccaaatcccgacaaatgggtaaatctccacaacataaataaatccaggataaacaatctagaataatcat-aagacaaacatcct 5770204  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtcta 239  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||||  ||||||||||||||||||| ||||| |||||||||| |||  ||||||    
T  5770203 agatcagagcctatcctaagactctaaggaaatgataacggagatagctcttgctatccaagcaactcacc-aaagc-aactaatcctgcacttcgtcta 5770106  T
Q  240 cccattca-acaaacaggtaggcggtc 265  Q
    ||||| || ||| ||||||||| ||||    
T  5770105 cccatccatacagacaggtaggtggtc 5770079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 36 - 265
Target Start/End: Original strand, 21041856 - 21042082
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||    
T  21041856 acatcatcatataaattctccaaatcccgacaaatgggtaaatctccacaacataaataagt-cagaataaacgatctagaataatcataa-gacagaca 21041953  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||| |||||||||| |||  ||    
T  21041954 tcctagatccgagcctaccctaagactctaaggaaacgataacggagatagttcccgctatccaagcaa-tcaccaaaagc-aactaatcctgcacttcg 21042051  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    | ||||||| || ||| ||||||||||||||    
T  21042052 tttacccatccatacagacaggtaggcggtc 21042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 265
Target Start/End: Original strand, 40555439 - 40555665
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  40555439 acatcatcataaaa-ttcttcaaatcccgacaaatgggcaaatctccacaacataaataaatccaaaataaacaatctagaataatcat-aagacagaca 40555536  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||| ||||| ||||| ||||| ||||| ||||| |||||||| |||||  ||    
T  40555537 tcctagatcagagcctaccctgagactctaaggaaacgataacgaagatagttcccgatatccgagcaa-tcaccaaaagc-aactaatcatacacttcg 40555634  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||| || ||| ||||||||||||||    
T  40555635 tctacccatccatacagacaggtaggcggtc 40555665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 5472502 - 5472338
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || || | |||||||||| ||||||| ||||||||||    
T  5472502 acatcatcatataaattctccaaatcccgacaaatgggtaaatctcca-aacataaataaatccaaaacagacaatctagagtaatcat-aagacagaca 5472405  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     |||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||| |||||||||||    
T  5472404 -cctagatcagagcctaccct-agactctaaggaaccgataccggagatagctcccgatatccaagcaa 5472338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 40438437 - 40438304
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||| ||||||  ||||| |||||||||||| ||||||| |||||||||||||  |||||||||||||||||||||||||| || |||||||||||    
T  40438437 catcataacaattcttcaaatcccgacaaatgggctaatctccgcaacataaataaaaccagaataaacaatctagaataatcat-aatacagacatcct 40438339  T
Q  140 agatcagagcctaccctaagactctaaggaaacga 174  Q
    |||||||||||||||||||| ||||||| ||||||    
T  40438338 agatcagagcctaccctaagtctctaagaaaacga 40438304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 20820561 - 20820657
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||||||||||||    
T  20820561 aatctagaataatcataaagatagacatcctagatcagagcctatcctaagactcaaaagaaaacgataacggagatagctcccgctatccaagcaa 20820657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 52397723 - 52397888
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||||| ||||||| ||||| || || | | |||||||||||||||||||  |||||    
T  52397723 acatcatcatcaaaattctccaaaatcccgacaactgggtaaatctccaaaacataa-taaatccacaagagataatctagaataatcataaa--cagac 52397819  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||||||||||| ||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  52397820 a-cctagatcagagtctatcctagg-ctctaaggacacgataacagagatagctcccgctatccaagcaac 52397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 40438305 - 40438161
Alignment:
Q  132 gacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaac 220  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||           |||||||||||||| |||||||||    
T  40438305 gacatcctagatcagagcctaccctaagactctaagaaaacgataacggagatagctcccgctatccaaacaatcaccaagcaactcaccaaaagcaaac 40438206  T
Q  221 taatcctacacgccgtctacccattca-acaaacaggtaggcggt 264  Q
    ||||| | ||| |||||||||||| || ||  |||||||||||||    
T  40438205 taatcatgcactccgtctacccatccatacggacaggtaggcggt 40438161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 46143842 - 46144044
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||||| ||||||| ||  | ||  | | | |||||||||||||||||||  || ||    
T  46143842 acatcatcatcaaaattctccaaaatcccgacaattgggtaaatctccaaaacataa-taggtccactacagataatctagaataatcataaa--catac 46143938  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgcc 234  Q
    | |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||| |||  |    
T  46143939 a-cctagatcagagcctatccta-gactctaaggacacgataacggagatagctcccgctatccaagcaactcacc-aaagc-aactaaccctgcacctc 46144034  T
Q  235 gtctacccat 244  Q
    ||||||||||    
T  46144035 gtctacccat 46144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 21193225 - 21193389
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||| |||||||| || ||||||||||| |||||| || ||||| ||| ||| || || | | |||||||| ||||||||||  ||||||    
T  21193225 acataatcataaaagttctctaagtcccgacaaatgggtaaatcttca-aacatgaatcaatccaaaacagataatctagagtaatcataaa--cagaca 21193321  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     |||||||||||||||| |||| ||||||||||| |||||| | |||||||||||||||| |||||||||    
T  21193322 -cctagatcagagcctatccta-gactctaaggacacgatagcggagatagctcccgctacccaagcaac 21193389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 50002047 - 50001917
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    |||||||||||| ||||| |||||| |||| |||||||||  |||||||||||| || || ||| ||||||||||| ||||||  ||||||| |||||||    
T  50002047 ataaaaattctccaaatcccgacaagtgggtaaatctccagcacataaataaatccacaacaaataatctagaatagtcataa--acagaca-cctagat 50001951  T
Q  144 cagagcctaccctaagactctaaggaaacgataac 178  Q
    ||||||||| ||| |||||||||||| ||||||||    
T  50001950 cagagcctatcct-agactctaaggacacgataac 50001917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 20191904 - 20192027
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||||| ||  |||||||||  ||||| ||||||||||||||||||| |||||  ||||||||||| |||||||| ||||||||    
T  20191904 atcagagcctaatctaagactccaat-aaacgataatggagattagctcccgctatccaagca-ctcacaaaaagcaaactactcctacactccgtctac 20192001  T
Q  241 ccattca-acaaacaggtaggcggtc 265  Q
    ||||||| ||||||||||||||||||    
T  20192002 ccattcatacaaacaggtaggcggtc 20192027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 25093028 - 25093138
Alignment:
Q  155 ctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaa 252  Q
    ||||||||| ||| ||| |||||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||| ||| ||||||| ||||||| |||||    
T  25093028 ctaagactccaag-aaatgataacggagattagctcccgctatccaagca-ctcaccaaaagcaaactactcctgcactccgtctatccattcatacaaa 25093125  T
Q  253 caggtaggcggtc 265  Q
    ||||| |||||||    
T  25093126 caggttggcggtc 25093138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 78511 - 78389
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||| | ||| |||||||||| ||||| | || ||||||||||||||||||||| ||||||||||| || | |||  |||||||    
T  78511 atcagagcctaatctaagaccccaag-aaacgataacggagattatcttccgctatccaagcaactcaccaaaagcaaactagtcatgcacttcgtctac 78413  T
Q  241 ccattca-acaaacaggtaggcgg 263  Q
    |||| || ||| ||||||||||||    
T  78412 ccatccatacagacaggtaggcgg 78389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 265
Target Start/End: Original strand, 18164287 - 18164471
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaac-gat 175  Q
    |||||| ||| |||||| || ||| ||| ||||||||  |||| |||||| |||||||| |||||||||||||||| ||| ||||||||||||||| |||    
T  18164287 tctccaaaacgtaaatacatccaggatagacaatctaagataaatcataa-gacagaca-cctagatcagagcctatcct-agactctaaggaaactgat 18164383  T
Q  176 aacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    | |  |||||||||||| ||| ||| | |||||||| |||| |||||||| | |||| ||||||||||| || ||| ||||||||||||||    
T  18164384 accgaagatagctcccgatatgcaatc-actcaccg-aagc-aactaatcatgcacgtcgtctacccatccatacagacaggtaggcggtc 18164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 41217482 - 41217539
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccact-aggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||    
T  41217482 cgtctacccatccatacagacaggtaggcggtccatcacagatccactaaggggtaag 41217539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 20820661 - 20820730
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||| ||| ||||||||| || |||  |||| ||||||| | ||||||||||||||||||    
T  20820661 ccaagcaactcaccaaaaacaaactaattctgcacttcgtcaacccatttatacaaacaggtaggcggtc 20820730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 22080129 - 22080185
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||||||||||||||||||||||||||| || |||||    
T  22080129 cgtctacccatccatacagaaaggtaggcggtccatcacagatccactgggcgtaag 22080185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 34964995 - 34965162
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |    
T  34964995 acatcatcataaaaattctctaaatcccgacaaatgggaaaatctccacaacataaataaatccagaataaacaatctagaatagtcat-aagacagaaa 34965093  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  34965094 acctagatcagagcctaccctaagactcaaaggaaacgataacggagatagctcccgctatccaagcaa 34965162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 22468214 - 22468050
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  22468214 catcataaaaattctccaaatcccgacaaatggacaaatctccacaacataaataaatccagaataaacaatctagaataatcataaaaacagacatcct 22468115  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     ||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  22468114 tgattagagcctaccctaaaactctaaggaaacgataacggagatagctcccactatccaagcaa 22468050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 29163025 - 29162857
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||| || |||||||  ||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29163025 acatcatcgtataaattcttcaaatctcgaaaaatgggcaaaactccacaacataaataaatccagaataaacaatctagaataatcataaagacagaca 29162926  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  29162925 tcctagatcagagcctaccctaagactctaaggatacgataacggagatagctcccgatatccaagcaa 29162857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 22595770 - 22595604
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| |||||||| ||| | ||||||||||| ||||||||| ||||||||||| |  ||||||||||||||||||||||||||| || |||||    
T  22595770 acatcatcatataaattctccaaaccccgacaaatgggtaaatctccaaaacataaataagta-agaataaacaatctagaataatcataa-gatagaca 22595673  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22595672 tcctagatcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaa 22595604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 15006736 - 15006579
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||| ||||||||||||    
T  15006736 catcataaaaattctcgaaatcccgacaaatgggcaaatctccacaacataaataaat-----------aatctagaataatcataa-gacagacatcct 15006649  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcac 209  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  15006648 agatcagagcctatcctaagactctaaggaaacgataatggagataggtcccgctatccaagcaactcac 15006579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 43 - 265
Target Start/End: Original strand, 16131326 - 16131562
Alignment:
Q  43 cataaaaattctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctag 141  Q
    |||| ||| |||| ||||| ||||| ||||||||| ||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  16131326 catataaaatctccaaatcccgacatatgggcaaaatctccacaacataaacaaatccagattaatcaatctagaataatcataaagacagacatcctag 16131425  T
Q  142 atcagagcctaccctaagactc-taaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaactaatcctac 229  Q
    ||||||||||||||||||||||  ||| |||||||||| ||||||||||| | |||           |||||||||||||| |||||||||||||||| |    
T  16131426 atcagagcctaccctaagactcaaaagaaaacgataacggagatagctcctgttatccaaacaatcaccaagcaactcaccaaaagcaaactaatcctgc 16131525  T
Q  230 acgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||  |||||||||||||| ||||||||||||| ||||    
T  16131526 acttcgtctacccattcatacaaacaggtaggtggtc 16131562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 265
Target Start/End: Original strand, 23219107 - 23219268
Alignment:
Q  103 ataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactcta-aggaaacgataacagagatagctcccgctatccaag 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||| ||||||| ||||||  | ||||||||||||    
T  23219107 ataaataatctagaataatcataaagacagacatcctagatcagagcctactctacgactcaagaggaaccgataacggagataaattccgctatccaag 23219206  T
Q  202 caactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    | |||||||  |||||||||| |||| ||| | ||||||||||||| ||||||||||||||||||    
T  23219207 c-actcacc--aagcaaactactcctgcactctgtctacccattcatacaaacaggtaggcggtc 23219268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 19852329 - 19852492
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||| || |||||||||  ||||  |||| | ||||| ||||    
T  19852329 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaatataaataaatccaaaataaacaa--tagagaaatcgt-aagaccgaca 19852425  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     |||||||||||||||| ||| ||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  19852426 -cctagatcagagcctatcct-agactctaatgaaatgataacgaagatagctcccgctatccaagcaa 19852492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 265
Target Start/End: Original strand, 21929567 - 21929742
Alignment:
Q  103 ataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccgctat----- 196  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||||| || |||||  ||| |||||||||| |||||||||||| ||||         
T  21929567 ataaacaatctagaacaatcataaagacaaacatcctagatcatagcctaccttatgactcaaaagaaaacgataacggagatagctcccactatccaag 21929666  T
Q  197 ------ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
          ||||||||||||||||||||||||||||| | ||   |||||||||||||| ||||||||||||||||||    
T  21929667 caatcaccaagcaactcaccgaaagcaaactaatcatgcatttcgtctacccattcatacaaacaggtaggcggtc 21929742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 31469609 - 31469485
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataa 177  Q
    |||||| ||||||||||||| ||| ||| ||||| || ||||||||||| | || |||||||||||||| ||| | |||| ||||||| |||| ||||||    
T  31469609 tctccaaaacataaataaatccaggatagacaatttataataatcataagg-ca-acatcctagatcagtgcccatcctacgactctacggaaccgataa 31469512  T
Q  178 cagagatagctcccgctatccaagcaa 204  Q
    | |||||||||||||||||||||||||    
T  31469511 cggagatagctcccgctatccaagcaa 31469485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 15295586 - 15295494
Alignment:
Q  52 tctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    |||| ||||| ||||||||||| ||| ||| |||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||||||    
T  15295586 tctccaaatcccgacaaatgggtaaaatcttcacaacataaataaatccagaataatcaatctagaataatcatacatacagacatcctagat 15295494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 17375668 - 17375599
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||    
T  17375668 ccaagcaactcaccgaaagcaaactaatcctgcacttcgtctacccattcatacaaacaggtaggcggtc 17375599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 22846190 - 22846348
Alignment:
Q  41 atcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatccta 140  Q
    ||||||||| ||||| || || ||||||||||| ||||||||| ||||| |||||| ||  || | | |||||||| ||||||||||  |||||| ||||    
T  22846190 atcataaaagttctcaaagtctcgacaaatgggtaaatctcca-aacatgaataaaatccaaacagataatctagagtaatcataaa--cagaca-ccta 22846285  T
Q  141 gatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    ||||||||| || |||| ||||||||| | |||||||| ||||||||| ||||||||||||||||    
T  22846286 gatcagagcttatccta-gactctaag-acacgataacggagatagctaccgctatccaagcaac 22846348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 206
Target Start/End: Complemental strand, 12311114 - 12310949
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||  ||||| || || ||||||||| | ||||||||| ||||| ||||||| || || | | |||||||| |||||||||| |  ||||    
T  12311114 acataatcataaatgttctccaagtcccgacaaatgcgtaaatctcca-aacatgaataaatccaaaacagataatctagagtaatcataaata--gaca 12311018  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaact 206  Q
     |||| ||||||||||| |||| ||||||||||| |||||| | |||||||||||| ||||||||||||||    
T  12311017 -cctatatcagagcctatccta-gactctaaggacacgatagcggagatagctcccactatccaagcaact 12310949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 204
Target Start/End: Original strand, 19670614 - 19670739
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| |||||||||| || ||| ||| |||||||| ||||| |||||| |||| |||||||||||||||| ||| |||| |||||||  ||| |||||    
T  19670614 tctccaaaacataaatagatccaggatagacaatctataataaatcataa-gaca-acatcctagatcagagtctatcctacgactctacagaaccgata 19670711  T
Q  177 acagagatagctcccgctatccaagcaa 204  Q
    || |||||| ||||| ||||||||||||    
T  19670712 acggagataactccctctatccaagcaa 19670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 33540315 - 33540178
Alignment:
Q  63 cgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagact 162  Q
    |||||| |||| ||||||||| ||||| ||||||| || || | | |||||||| ||||||||||  |||||| ||||||| |||| ||| |||| ||||    
T  33540315 cgacaattgggtaaatctcca-aacatgaataaatccaaaacagataatctagagtaatcataaa--cagaca-cctagataagagtctatccta-gact 33540221  T
Q  163 ctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||| || ||||||   ||||||||||||||||||||||||||    
T  33540220 ctaaagacacgatagtggagatagctcccgctatccaagcaac 33540178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 34965166 - 34965235
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||| |||||||||||||| | |||| ||||||||||| || | | ||||||||||||||    
T  34965166 ccaagcaactcaccaaaagcaaactaatcttgcacgtcgtctacccatccatatagacaggtaggcggtc 34965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 18397122 - 18397158
Alignment:
Q  252 acaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18397122 acaggtaggcggtccatcacagatccact-ggggtaag 18397158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 4174643 - 4174595
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||| |||| |||||||||||||||| || ||||||||||||||||||    
T  4174643 aactactcctgcacgccgtctacccatccatacaaacaggtaggcggtc 4174595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 14628622 - 14628566
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||| ||||||||||||||||||||    
T  14628622 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 14628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 36 - 296
Target Start/End: Original strand, 11963659 - 11963929
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    ||||||||||| ||| |||| |||||  ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||   |||||||||||||    
T  11963659 acatcatcatataaaatctccaaatcctgacaaatgggcaaatctccacaatataaataaatctagaataaacaatctagaatagatataaagacagaca 11963758  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaactaat 224  Q
    ||||||||||||| ||||||| ||||||  |||||||||||||  ||||||||||||||||           |||||||||||||| |||||||||||||    
T  11963759 tcctagatcagagtctaccctcagactc--aggaaacgataacgaagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagcaaactaat 11963856  T
Q  225 cctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||| ||| ||||||||  | ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11963857 cctgcaccccgtctactaagtcatacaaacaggtaggcggtccatcacagatccactgggggtaagcttcaca 11963929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 23236515 - 23236352
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||    
T  23236515 catcataaaaattctccaaatcccgacaaatgggtaaatctccacaacataaataaatccaagataaacaatctagaataatcataa-gacagacatcct 23236417  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  23236416 agatcagagcctatcctaagactctaaggaaacgataacggagatagctcccgctatctaagcaa 23236352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 47 - 204
Target Start/End: Original strand, 19871987 - 19872144
Alignment:
Q  47 aaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcag 146  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||| ||||||||    
T  19871987 aaaattctccaaatcccgacaaatgagcaaatctccacaacataaataaatcaaaaataaacaatatagaataatcataaagacagacatcgtagatcag 19872086  T
Q  147 agcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||    
T  19872087 agcctaccctaagactctaaagaaacaataatggagatagctcccgctatccaagcaa 19872144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 88 - 296
Target Start/End: Complemental strand, 14345728 - 14345508
Alignment:
Q  88 ataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctac-cctaagactctaaggaaacgataacagagatag 186  Q
    |||||||||| ||| | || |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| || ||||||||||| |||||||    
T  14345728 ataaataaatccagcaaaaccaatctagaataatcataaagacagacatcctagatcaaagcctacatctaagactccaa-gaaacgataacggagatag 14345630  T
Q  187 ctcccgctat-----------ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacaga 274  Q
    ||||||||||           |||| |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  14345629 ctcccgctatccacgcaatcaccaaacaactcaccgaaagcaaactaatcttgcacgctgtctacccattcatacaaacaagtaggcggtccatcacaga 14345530  T
Q  275 tccactaggggtaagcttcaca 296  Q
    |||| | |||||||||||||||    
T  14345529 tccatttggggtaagcttcaca 14345508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 5623527 - 5623356
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||| ||||| ||||||| ||||||||||    
T  5623527 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaacataaataaatccacaataaacaacctagagtaatcat-aagacagaca 5623429  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcacc 210  Q
     |||||||| ||| ||| ||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  5623428 -cctagatcggagtctatcct-agactttaaggaaacgataacggagataactcccgctatccaagcaactcacc 5623356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 11765821 - 11765596
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    ||||||||||| ||| |||| ||||| ||||| ||||||||| |||| |||||||||||     ||| | || |||||||||||||||||||||||||||    
T  11765821 acatcatcatataaaatctcaaaatc-cgacatatgggcaaaatctcaacaacataaatc----cagcaaaagcaatctagaataatcataaagacagac 11765727  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcacc-gaaagcaaactaatcctacacgc 233  Q
    ||||||||||||||||||| |||| |||| || | | ||||||| ||||||||||||||||||||| | |||||||  ||||||||||| |||| ||| |    
T  11765726 atcctagatcagagcctactctaaaactccaaag-accgataacggagatagctcccgctatccaatc-actcaccaaaaagcaaactactcctgcactc 11765629  T
Q  234 cgtctacccattca-acaaacaggtaggcggtc 265  Q
    | |||||||||||| ||||| ||||||||||||    
T  11765628 catctacccattcatacaaataggtaggcggtc 11765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 3420914 - 3420776
Alignment:
Q  63 cgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagact 162  Q
    ||||||||| | ||||||||| ||||||||||||| || ||||||||||||||| ||||||||  |||||||| ||||||||||| |||| |||| ||||    
T  3420914 cgacaaatgagaaaatctccaaaacataaataaatccacaataaacaatctagagtaatcatac-gacagaca-cctagatcagaacctatccta-gact 3420818  T
Q  163 ctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  3420817 ctaaggaaacgataacggagatagcttccgctatccaagcaa 3420776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 41 - 200
Target Start/End: Complemental strand, 26561891 - 26561735
Alignment:
Q  41 atcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatccta 140  Q
    ||||||||| ||||| ||||| ||||||||||| || |||||| |||||||||||||||| ||||||||||||||| ||||||| |||| ||||| ||||    
T  26561891 atcataaaatttctccaaatcccgacaaatgggtaattctccaaaacataaataaattcacaataaacaatctagagtaatcat-aagatagaca-ccta 26561794  T
Q  141 gatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaa 200  Q
    |||||||||||| ||| |||||||||   || |||||  |||||||||||||||||||||    
T  26561793 gatcagagcctatcct-agactctaaacgaatgataatggagatagctcccgctatccaa 26561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 33628327 - 33628216
Alignment:
Q  94 aaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatagctcccg 192  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  |||||| | ||||| |||||| ||||||    
T  33628327 aaatccagcataaacaatctagaataatcataaagacagacatcttagatcagagcctaccataagactcaaaaggaaccaataacggagataactcccg 33628228  T
Q  193 ctatccaagcaa 204  Q
    ||||||||||||    
T  33628227 ctatccaagcaa 33628216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 29912119 - 29912276
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    |||||||||||| ||||| |||||| ||||||||||||||  |||||||||||| || || | | ||||||||||||||||||  ||||||| |||||||    
T  29912119 ataaaaattctccaaatcccgacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaataatcataa--acagaca-cctagat 29912215  T
Q  144 cagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    || |||||| ||| ||||||||||||   |||||| ||||| ||| ||||||||||||||||    
T  29912216 caaagcctatcct-agactctaaggacttgataacggagatggcttccgctatccaagcaac 29912276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 20456512 - 20456416
Alignment:
Q  199 aagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    |||||||||||| ||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||||| | |  ||||||||||||||    
T  20456512 aagcaactcaccaaaagcaaactagtcatgcacgccgtctacccattcatacaaacaggtaggcggtccatcacagatctagt--gggtaagcttcaca 20456416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 24082178 - 24082343
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||||| ||||||| ||||| || || |   |||||||||||||||||||  |||||    
T  24082178 acatcatcatcaaaattctccaaaatcccgacaactgggtaaatctccaaaacataa-taaatgcacaacaggtaatctagaataatcataaa--cagac 24082274  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | ||||||||||||| || | || ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  24082275 a-cctagatcagagcttatcgta-gactctacggacacgataacggagatagctcccgctatccaagcaac 24082343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 6454769 - 6454934
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| |  |||||| ||||||||| |||| ||||||| ||||| || || | | ||| |||| ||||||||||  |||||    
T  6454769 acatcatcatcaaaattctccaaaattccgacaactgggcaaatatccaaaacataa-taaatccacaacagataatttagagtaatcataaa--cagac 6454865  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||||||||||||||| |||| |||| |||||| |||||||| |||||||||||| |||||||||||||    
T  6454866 a-cctagatcagagcctatccta-gactttaaggacacgataacggagatagctcccactatccaagcaac 6454934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 23492159 - 23492231
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||    
T  23492159 aactaatcctgcacaacgtctacccagccatacagacaggtaggcggtccatcacagatccactaggggtaag 23492231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 3671689 - 3671744
Alignment:
Q  235 gtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  3671689 gtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaag 3671744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 11579845 - 11579917
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| ||||| |||||||||||||| |||||||||||||||||    
T  11579845 aactaatcctgcacaacgtctacccatccatacagacaggcaggcggtccatcactgatccactaggggtaag 11579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 16837740 - 16837630
Alignment:
Q  155 ctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaa 252  Q
    ||||||||| ||| |||| ||||| ||||| ||||||||||||||||||| |||||| ||||||||||| |||| |||  ||||||||||| || ||| |    
T  16837740 ctaagactccaag-aaacaataacggagattagctcccgctatccaagca-ctcaccaaaagcaaactactcctgcacttcgtctacccatccatacaga 16837643  T
Q  253 caggtaggcggtc 265  Q
    |||||||| ||||    
T  16837642 caggtaggtggtc 16837630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 23412182 - 23412253
Alignment:
Q  184 tagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacag 255  Q
    |||||||||||||||||||| |||||| ||||||||||| | || ||| ||||||||||||||| ||||||||    
T  23412182 tagctcccgctatccaagca-ctcaccaaaagcaaactacttctgcactccgtctacccattcatacaaacag 23412253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 28888138 - 28888206
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactagggg 285  Q
    |||||||||| |||  ||||||||||| || ||| ||||||| ||||||||||||||||||||| ||||    
T  28888138 aactaatcctgcacaacgtctacccatccatacagacaggtatgcggtccatcacagatccactggggg 28888206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 17907739 - 17907810
Alignment:
Q  219 actaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||| |||  ||||||||||| || ||| | ||| ||||||||||| ||||||||||||||||||||    
T  17907739 actaatcctgcacaacgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 17907810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 24227882 - 24227785
Alignment:
Q  198 caagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||||||||    |||||||||| |||  |||||||||||  | ||| ||||||||| ||||||||||| |  |||| |||||||||||||||    
T  24227882 caagcaactcaccgaatc--aactaatcctgcacaacgtctacccatctatacagacaggtaggtggtccatcacataaacactgggggtaagcttcaca 24227785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 25944811 - 25944755
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| |||||| || ||||||||||||||||||| ||||||||    
T  25944811 cgtctacccatccatacagacaggttggtggtccatcacagatccactgggggtaag 25944755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 119; Significance: 8e-61; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 2077 - 1851
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| || || ||||||||||| |||||||||||  |||||||||| || ||||||||||||||||||||||||| ||||||||    
T  2077 acatcatcataaaaattctccaa-tcccgacaaatgggtaaatctccacagtataaataaatccaaaataaacaatctagaataatcataa-gacagaca 1980  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    |||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||  ||    
T  1979 tcctagattagagcctgtcctaagactctaaggaaacgataacggagatagctcccgctatccaagcaactcacc-aaagc-aactaatcctgcacttcg 1882  T
Q  236 tctacccattca-acaaacaggtaggcggtc 265  Q
    |||||| || || ||| | ||||||||||||    
T  1881 tctacctatccatacagataggtaggcggtc 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 14208 - 14159
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaa 86  Q
    |||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  14208 acatcatcataaaaattctccaa-tcccgacaaatgggtaaatctccacaa 14159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 119; Significance: 8e-61; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 40 - 265
Target Start/End: Original strand, 84491 - 84710
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||     ||||||||    
T  84491 catcataaaagttctccaaatcccgacaaatgggcaaatctccacaatgtaaataaattcaaaataaacaatctagaataatcataa-----gacatcct 84585  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtcta 239  Q
    |||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||  ||||||    
T  84586 agatcagagcttattctaagactctaaggaaacgataacggagatagctcccgctatccaagcaactcacc-aaagc-aactaatcctgcacttcgtcta 84683  T
Q  240 cccattca-acaaacaggtaggcggtc 265  Q
    ||||| || ||| || |||||||||||    
T  84684 cccatccatacagacgggtaggcggtc 84710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 25616 - 25780
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| |||||  ||||| |||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| |||    
T  25616 acatcatcataaaaattctccaaatcctgacaattgggtaaatctccacaacgtaaataaatccagaataaacaatctaaaataatcataa-gacaaaca 25714  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaag 201  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  25715 tcctagatcagagcctatcctaagactctaaggaagcgataacggagatagctcccgctatccaag 25780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 331098 - 331026
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| |||||||||| |||||||||||||||||| ||||||||    
T  331098 aactaatcctgcacaacgtctacccatccatacagacaggtaggcagtccatcacagatccactgggggtaag 331026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 9323168 - 9322962
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| |||||||||| |  ||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||||||||| |||| |||    
T  9323168 acatcaacataaaaattattcaaatcccgacaaatgggaaaatctccacaacataaataaatccacaataaaaaatctagaataatcataa-gacaaaca 9323070  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccg 235  Q
    ||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||| |||  ||    
T  9323069 tcctaaagcagagcctaccctaagactctaaggaaactataacggagatagctcccgatatccaagcaactcaccaaaagc-aactaatcctgcacttcg 9322971  T
Q  236 tctacccat 244  Q
    |||||||||    
T  9322970 tctacccat 9322962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 17948136 - 17947995
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17948136 acatcatcataaaaattctccaaatcccgacaaatgggcaaatctcaacaacataaataaatccagaataaacaatctagaataatcat-aagacagaca 17948038  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataac 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  17948037 tcctagatcagagcctaccctaagactcaaaggaaacgataac 17947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 4482336 - 4482498
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  4482336 catcataaaagttctccaaatcccgacaaatgggcaaatctccacatg-taaataaatccaaaataaacaatctagaataatcataa-gacagacatcct 4482433  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    |||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4482434 agatcaaagcctatcctaagactctaatgaaacgataacggagatagctcccgctatccaagcaa 4482498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 244
Target Start/End: Original strand, 9641119 - 9641324
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       
T  9641119 catcataaaaattctccaaatcccgataaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatcataaagacagacat--- 9641215  T
Q  140 agatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctat-----------ccaagcaactcaccgaaagcaaactaatccta 228  Q
           ||||||||||||||||| |||||||||||||| |||||||||||| ||||           |||||||||||||| |||||||||||||||||    
T  9641216 -------agcctaccctaagactcaaaggaaacgataacggagatagctcccactatccaagcaatcaccaagcaactcaccaaaagcaaactaatccta 9641308  T
Q  229 cacgccgtctacccat 244  Q
    |||  |||||||||||    
T  9641309 cacttcgtctacccat 9641324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 78 - 296
Target Start/End: Complemental strand, 21677592 - 21677364
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataa 177  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||| ||||||||||||||| ||| |||||||||||| ||| |||||||    
T  21677592 tctcctcaacataaataaatccagaataaacaatatagaataatcatca-gacaggcatcctagatcagagtctatcctaagactctacggagacgataa 21677494  T
Q  178 cagagatagctcccgctatccaa-----------gcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    | |||||||||||||||||||||           |||||||||| ||||| |||||||| | ||||| ||||||||||||| ||||||||||||||||||    
T  21677493 cggagatagctcccgctatccaagcaatcaccaagcaactcaccaaaagc-aactaatcatgcacgcagtctacccattcatacaaacaggtaggcggtc 21677395  T
Q  266 catcacagatccactaggggtaagcttcaca 296  Q
    ||| ||||||||| | |||||||||||||||    
T  21677394 cattacagatccaatgggggtaagcttcaca 21677364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 296
Target Start/End: Complemental strand, 4073048 - 4072842
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctccc 191  Q
    |||||| ||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || | | ||||||| |||| |||||||    
T  4073048 ataaatccagcatagacaatctaaaataatcataaagacatacatcctagatcagagcctactctaagactccaaag-accgataacggagaaagctccc 4072950  T
Q  192 gctatccaagcaactcacc--gaaagca--aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggt 286  Q
     |||||||||| |||||||  |||| ||  ||||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  4072949 actatccaagc-actcaccaagaaatcaacaactactcctgcacgccgtctacccattcatacaaacaggtaggcggtccaccacaga-ccactaggggt 4072852  T
Q  287 aagcttcaca 296  Q
     |||||||||    
T  4072851 tagcttcaca 4072842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 28718224 - 28718352
Alignment:
Q  169 aaacgataacagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtcca 267  Q
    |||||||||| | |||||||||  ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||    
T  28718224 aaacgataacggggatagctcctactatccaagcaactcactgaaagcaaactaatcatgcacgccgtctacccattcatacaaataggtaggcggtcca 28718323  T
Q  268 tcacagatccactaggggtaagcttcaca 296  Q
    ||| ||||||||| |||||||||||||||    
T  28718324 tcatagatccactgggggtaagcttcaca 28718352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 265
Target Start/End: Complemental strand, 18921160 - 18920976
Alignment:
Q  79 ctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataa 177  Q
    ||||| ||||||||||||| ||| ||| |||||||| ||||| || ||| |||| | |||||||||||||||||| |||| ||||||| |||| ||||||    
T  18921160 ctccaaaacataaataaatccaggatagacaatctataataaatcgtaa-gacaaa-atcctagatcagagcctatcctacgactctacggaaccgataa 18921063  T
Q  178 cagagatagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||  ||||||||||| || ||| ||||||||||||||    
T  18921062 cagagattgctcccgctatccaagcaactcacc-aaagc-aactaatcctgcacttcgtctacccatccatacagacaggtaggcggtc 18920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 39294211 - 39294094
Alignment:
Q  88 ataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc-taaggaaacgataacagagatag 186  Q
    |||||||||| ||| | || |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||  ||| |||||||||| |||||||    
T  39294211 ataaataaatccagcaaaaccaatctagaataatcataaagataggcatcctagatcagagcctaccataagactcaaaagaaaacgataacggagatag 39294112  T
Q  187 ctcccgctatccaagcaa 204  Q
    ||||||||||||||||||    
T  39294111 ctcccgctatccaagcaa 39294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 15980559 - 15980468
Alignment:
Q  114 agaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagaga-tagctcccgctatccaagcaa 204  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  15980559 agaataatcataaagatagacatcctagatcagagcctactctaagactctaaagaaccgataacggagattagctcccgctatccaagcaa 15980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 14938780 - 14938936
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    ||||||||||||| |||| | |||| ||||||||||||||  |||||||||||| || || | | ||||||||||| ||||||  ||||||| |||||||    
T  14938780 ataaaaattctctgaatcccaacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaatagtcataa--acagaca-cctagat 14938876  T
Q  144 cagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||| ||| |||||||||| || ||||| | ||||||||||||| |||||||||||    
T  14938877 cagagcctatcct-agactctaagaaaccgataccggagatagctcccgatatccaagcaa 14938936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 15366373 - 15366529
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    ||||||||||||| |||| | |||| ||||||||||||||  |||||||||||| || || | | ||||||||||| ||||||  ||||||| |||||||    
T  15366373 ataaaaattctctgaatcccaacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaatagtcataa--acagaca-cctagat 15366469  T
Q  144 cagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
    ||||||||| ||| |||||||||| || ||||| | ||||||||||||| |||||||||||    
T  15366470 cagagcctatcct-agactctaagaaaccgataccggagatagctcccgatatccaagcaa 15366529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 31499313 - 31499463
Alignment:
Q  38 atcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatc 137  Q
    |||| ||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| || ||  |||||||||||            |||||||||    
T  31499313 atcaacataaaaattctcaaaatcccgacaattgggtaaatctccacaacataaataaatccaaaacgaacaatctaga------------acagacatc 31499400  T
Q  138 ctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaa 200  Q
    ||||||||||||||| ||||  |||||||| || ||||| | | ||||||||||| |||||||    
T  31499401 ctagatcagagcctatcctacaactctaagaaaccgatatcggcgatagctcccgatatccaa 31499463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 14278830 - 14278745
Alignment:
Q  212 aaagcaaactaatcctacacgccgtctacccattcaacaa-acaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||| |||| |||  ||||||||||| ||  || ||||||||| |||||||||||||||||||||||||||||||||||    
T  14278830 aaagcaaactagtcctgcacttcgtctacccatccataaagacaggtaggtggtccatcacagatccactaggggtaagcttcaca 14278745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 28388550 - 28388667
Alignment:
Q  86 acataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagat 184  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||| |||| ||||||||||||| || ||| |||| |||||||  ||| ||||||| |||||    
T  28388550 acataaataaatccaggatagacaatctataataagtcataa-gaca-acatcctagatcatagtctatcctacgactctaccgaaccgataacggagat 28388647  T
Q  185 agctcccgctatccaagcaa 204  Q
    |||||||| |||||||||||    
T  28388648 agctcccgttatccaagcaa 28388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 13460560 - 13460629
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||| |||||||||||||||||||| |||| ||| | ||||||||||||| ||||||||||||||||||    
T  13460560 ccaagaaactcaccgaaagcaaactactcctgcactctgtctacccattcatacaaacaggtaggcggtc 13460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 4437024 - 4437088
Alignment:
Q  126 aagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcc 190  Q
    |||||| |||||||||||||||||| | |||||||||||||| || ||||| | |||||||||||    
T  4437024 aagacaaacatcctagatcagagccaatcctaagactctaagaaatcgataccggagatagctcc 4437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 18305908 - 18305836
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||| ||| || ||| |||||||||| |||||||||||||||||||||||||||    
T  18305908 aactaatcctgcacaacgtctactcatccatacagacaggtaggcagtccatcacagatccactaggggtaag 18305836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 12545862 - 12545811
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggg 284  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  12545862 cgtctacccatccatacagacaggtaggcggtccatcacagatccactaggg 12545811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 13452418 - 13452487
Alignment:
Q  197 ccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||||||||||||| | |||| |||   ||||||| ||||| ||||||||||||||||||    
T  13452418 ccaagcaactcaccgaaagcaaaccactcctgcactttgtctaccaattcatacaaacaggtaggcggtc 13452487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 18081293 - 18081206
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacag 255  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||||| ||||||| ||| |||| ||| ||||||||||||||| ||||||||    
T  18081293 gaaacgataacggagattagctcccactatccaagca-ctcaccaaaagcaa-ctactcctgcactccgtctacccattcatacaaacag 18081206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 289
Target Start/End: Complemental strand, 7286559 - 7286527
Alignment:
Q  257 taggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||||||||||||||||||||||||||    
T  7286559 taggcggtccatcacagatccactaggggtaag 7286527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 9058633 - 9058567
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    ||||||||| |||||| |||| ||||||||| | |||||| | ||||||||||||||||||||||||||    
T  9058633 cctagatcaaagcctatccta-gactctaag-acacgatagcggagatagctcccgctatccaagcaac 9058567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 13868141 - 13868085
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||  ||||||||||||||||||||||||||    
T  13868141 cgtctacccatccatacagacaggtaggcaatccatcacagatccactaggggtaag 13868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 12245755 - 12245822
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggc-aaatctccacaacataaataaattcaga 102  Q
    ||||||||||| ||| |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||||    
T  12245755 acatcatcatataaaatctccaaatcccgacatatgggcaaaatctccataacataaataaatccaga 12245822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 15305677 - 15305755
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||| |||| ||||||||||||||||||| ||| | |||||||||||||| |||||| ||||| ||||  |||||||||    
T  15305677 aactactcctgcacgccgtctacccattcatacagataggtaggcggtccaccacaga-ccactgggggctagcttcaca 15305755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 106
Target Start/End: Complemental strand, 15980584 - 15980553
Alignment:
Q  75 aaatctccacaacataaataaattcagaataa 106  Q
    ||||||||||||||||||||||||||||||||    
T  15980584 aaatctccacaacataaataaattcagaataa 15980553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 33557966 - 33558025
Alignment:
Q  38 atcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaat 97  Q
    |||| ||||||||||||| ||||| |||||  |||| |||||||||||||| ||||||||    
T  33557966 atcaacataaaaattctccaaatcccgacatttgggtaaatctccacaacaaaaataaat 33558025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 4444425 - 4444499
Alignment:
Q  126 aagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaa 200  Q
    |||||| |||||||||||||||||| | ||||||| |||||| |||||| |   | ||||||||||| |||||||    
T  4444425 aagacaaacatcctagatcagagccaatcctaagattctaagaaaacgaaactggtgatagctcccgatatccaa 4444499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 16481104 - 16481034
Alignment:
Q  220 ctaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||| |||  |||||||||||||| ||| | ||| ||||||||||| ||||||||||| ||||||||    
T  16481104 ctaatcctgcacaacgtctacccattcatacagataggcaggcggtccataacagatccactgggggtaag 16481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 11285306 - 11285343
Alignment:
Q  252 acaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  11285306 acaggtaggcggtccatcacaaatccactgggggtaag 11285343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 14938959 - 14939007
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||| ||||||||||| || ||| ||||||||||||||    
T  14938959 aactaatcctacacgtcgtctacccatccatacagacaggtaggcggtc 14939007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 15366552 - 15366600
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||| ||||||||||| || ||| ||||||||||||||    
T  15366552 aactaatcctacacgtcgtctacccatccatacagacaggtaggcggtc 15366600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 142 - 296
Target Start/End: Original strand, 10438 - 10592
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||| |||||| |||| |||| ||| ||||||||    
T  10438 atcagagcctaatctaagactccaag-aaacgataacagagattagctcccgctatccaagca-ctcaccaaaagcatactactcctgcactccgtctac 10535  T
Q  241 ccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  10536 ccattcatacaaacaggtaggcggttcatcacagatccactgggggtaagtttcaca 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 99215 - 99381
Alignment:
Q  40 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaata-aattcagaataaacaatctagaataatcataaagacagacatc- 137  Q
    |||||||||||||||||||||| |||||| |||| ||||||||| |||||||||| ||| || ||||||  ||||||| ||||||| |||||||||| |     
T  99215 catcataaaaattctctaaatcccgacaattgggtaaatctccataacataaatataatccaaaataaatgatctagagtaatcat-aagacagacacct 99313  T
Q  138 ctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaact 206  Q
     |||||||||||||| ||| ||||||||||||||||||||   ||||||||||||||||||||||||||    
T  99314 atagatcagagcctatcct-agactctaaggaaacgataatgaagatagctcccgctatccaagcaact 99381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 109 - 265
Target Start/End: Complemental strand, 122005 - 121850
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagac-tctaaggaaacgataacagagatagctcccgctatccaagcaactc 207  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| ||||||| |  ||| ||||||||||| ||| |||||||||||||||||| |||     
T  122005 aatctagaataatcataaggacagacatcctagatcagatcctactctaagacttgaaagaaaacgataacaaagaaagctcccgctatccaagc-acta 121907  T
Q  208 accgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||  |||||||||| |||| ||| || |||||||||||| ||||||||||||||||||    
T  121906 acc--aagcaaactattcctgcactccttctacccattcatacaaacaggtaggcggtc 121850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 110253 - 110220
Alignment:
Q  256 gtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||||| ||||||||||||||||||||    
T  110253 gtaggcggtccataacagatccactaggggtaag 110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 106618 - 106559
Alignment:
Q  145 agagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||||| |||| ||| |||| || |||||| | ||||||||||||||||||||||||||    
T  106618 agagcctatccta-gaccctaaagacacgatagcggagatagctcccgctatccaagcaac 106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 26078 - 25913
Alignment:
Q  36 acatcatcataaaaa-ttctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    ||||||||||||||| ||||| ||||| |||||| |||| ||||||||| ||||||| ||  | || || | | |||||||||||||||||||  |||||    
T  26078 acatcatcataaaaaattctccaaatcccgacaattgggtaaatctccaaaacataa-taggtccacaacagataatctagaataatcataaa--cagac 25982  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25981 a-cctagatcagagcctatccta-gactctaaggacacgataacggagatagctcccgctatccaagcaac 25913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 5801 - 5953
Alignment:
Q  44 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagat 143  Q
    |||||||||||| ||||| |||||| ||||||||||||||  |||||| ||||| || || | | |||||||| ||||||||||  |||||| |||||||    
T  5801 ataaaaattctccaaatcccgacaagtgggcaaatctccaacacataa-taaatccacaacagataatctagagtaatcataaa--cagaca-cctagat 5896  T
Q  144 cagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaag 201  Q
    ||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  5897 cagagcctatccta-gactctaaggacacgataacggagatagctcccgctatccaag 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 18694 - 18858
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| | ||| ||||| | || || ||| ||||||||||||||| ||  |||||||    
T  18694 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaagcat-aataagtccacaacaaataatctagaataatcagaa--acagaca 18790  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     |||||||||||| ||| | | |||||||||||| |||||||| |||||||||||| |||||||||||||    
T  18791 -cctagatcagagtctatcat-agactctaaggacacgataacggagatagctcccactatccaagcaac 18858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 26390 - 26446
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||| ||||||||||||||||||||||| || |||||    
T  26390 cgtctacccatccatacagacaggcaggcggtccatcacagatccacttggagtaag 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 3778 - 3653
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| ||||||||||||| ||| ||| |||||||| ||||| |||||| |||| |||||||||||||||||||| |||| ||||||| |||| |||||    
T  3778 tctccaaaacataaataaatccaggatagacaatctataataaatcataa-gaca-acatcctagatcagagcctatcctacgactctacggaaccgata 3681  T
Q  177 acagagatagctcccgctatccaagcaa 204  Q
    || |||||||||||||||||||||||||    
T  3680 acggagatagctcccgctatccaagcaa 3653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 129964 - 130108
Alignment:
Q  57 aaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccct 156  Q
    ||||| ||||||||||| ||||||||| ||||||||||| | || |||||| |||||||| ||||||| |||||| ||| |||||||||||||||| |||    
T  129964 aaatcccgacaaatgggtaaatctccaaaacataaataagtccaaaataaagaatctagagtaatcat-aagacaaaca-cctagatcagagcctatcct 130061  T
Q  157 aagactctaaggaaacgataacagagatagctcccgctatccaagcaa 204  Q
     ||||||||||||  ||||| | ||||||||||||| |||||||||||    
T  130062 -agactctaaggacccgataccggagatagctcccgatatccaagcaa 130108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 6995 - 6834
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| | ||||| ||| | || || ||| ||||||||||   || |||  || |||    
T  6995 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaagcataa-taagtccacaacaaataatctagaat---cagaaa--caaaca 6902  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     |||||||||||||||  |||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  6901 -cctagatcagagcctgtccta-gactctaaggacacgataacggagatagctcccgctatccaagcaac 6834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 639 - 804
Alignment:
Q  36 acatcatcataaaaattctctaaa-tcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagac 134  Q
    |||||||||| ||||||||| ||| || |||||| |||| ||||||||| ||||||| ||||| || || | | |||||||||||||||||||  |||||    
T  639 acatcatcatcaaaattctccaaaatcccgacaattgggtaaatctccaaaacataa-taaatccacaacagataatctagaataatcataaa--cagac 735  T
Q  135 atcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    | |||| ||||||||||| | || ||||||| ||| | |||||| ||||||||||||||||||||||||||    
T  736 a-cctaaatcagagcctatctta-gactctatggacatgataacggagatagctcccgctatccaagcaac 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 204
Target Start/End: Original strand, 36000 - 36125
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| ||||||||||||||||| ||| |||||||| ||||| ||| ||||| | ||||||||| ||||||| || |||| ||||||| |||| |||||    
T  36000 tctccaaaacataaataaattcaggatagacaatctataataaatca-aaagata-acatcctagttcagagcttatcctatgactctacggaaccgata 36097  T
Q  177 acagagatagctcccgctatccaagcaa 204  Q
    || |||||||||||||||||||||||||    
T  36098 acggagatagctcccgctatccaagcaa 36125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 256847 - 256737
Alignment:
Q  92 ataaattcagaataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctccc 191  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||   || | | ||||||| |||||| |||||    
T  256847 ataaatccagcataatcaatctagaataatcataaagacagacatcctagatcagagcctactctaagacaacaaag-accgataacggagataactccc 256749  T
Q  192 gctatccaagca 203  Q
    | ||||||||||    
T  256748 gttatccaagca 256737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 98960 - 98838
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||||||  ||||||||| |||  ||||||||| ||||| |||||| ||||||||||| ||||||| |||| |||||| || |  || | ||||||    
T  98960 atcagagcctaatctaagactccaag--aacgataacggagattagctcctgctatccaagc-actcaccaaaagaaaactactcatctactctgtctac 98864  T
Q  241 ccattca-acaaacaggtaggcggtc 265  Q
    ||||||| ||||||| ||||||||||    
T  98863 ccattcatacaaacaagtaggcggtc 98838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 3007 - 3171
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||||||||| || || ||||||||| | ||||||||| ||||| ||||||| || || | | |||||||| ||||||||||  ||||||    
T  3007 acataatcataaaaattctccaagtcccgacaaatgcgtaaatctcca-aacatgaataaatccaaaacagataatctagagtaatcataaa--cagaca 3103  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     | |||||||||||||| |||| ||||||||||| |||||| | || |||||||||| ||||||||||||    
T  3104 -cgtagatcagagcctatccta-gactctaaggacacgatagcggatatagctcccgttatccaagcaac 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 20223 - 20347
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaata-atcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| ||||||||||||| ||| ||| |||||| | |||| ||||||| |||| ||||||||| |||||||||| |||| ||||||| |||| |||||    
T  20223 tctccaaaacataaataaatccaggatagacaatccataatagatcataa-gaca-acatcctaggtcagagcctatcctacgactctacggaaccgata 20320  T
Q  177 acagagatagctcccgctatccaagca 203  Q
    ||| |||||||||||||||||||||||    
T  20321 acaaagatagctcccgctatccaagca 20347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 16789 - 16689
Alignment:
Q  41 atcataaaaattctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcct 139  Q
    |||||| ||| |||| | ||| ||||||||||| ||| ||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  16789 atcatataaaatctccacatcccgacaaatgggtaaaatcttcacaacataaataaatccagaataatcaatctagtataatcataaagacagacatcct 16690  T
Q  140 a 140  Q
    |    
T  16689 a 16689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 296
Target Start/End: Complemental strand, 247843 - 247648
Alignment:
Q  103 ataaacaatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagc 202  Q
    |||| |||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| || || | | |||||||  |||||||||||||||||| |||    
T  247843 ataatcaatctagaacaatcataaagacaaacatcctagattagagcctactctaagattccaaag-accgataacgaagatagctcccgctatccgagc 247745  T
Q  203 aactcacc--gaaagca--aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
     ||| |||  | || ||  ||| | |||| ||||||||||||||||||| ||||| |||||||||||||| |||||| ||| | ||||| |||||||||    
T  247744 -acttaccaagcaaccaacaacaactcctgcacgccgtctacccattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcaca 247648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 3061 - 2966
Alignment:
Q  109 aatctagaataatcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaactca 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||||   || |||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  3061 aatctagaataatcataaa--cagaca-cctagatcagagcctattata-gactctgaggacacgataacggagatagctcccgctatccaagcaactca 2966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 94206 - 94262
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  94206 cgtctacccatccatacaaacaggtaggcggtccatcacagatccactaggggtaag 94262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 8389 - 8444
Alignment:
Q  108 caatctagaataatcataaagacagacatcctagatcagagcctaccctaagactc 163  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  8389 caatctagaataaacataaagacatacatcctagatcagagcctactctaagactc 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 141349 - 141224
Alignment:
Q  78 tctccacaacataaataaattcagaataaacaatctagaataa-tcataaagacagacatcctagatcagagcctaccctaagactctaaggaaacgata 176  Q
    |||||| |||||||||||||  || ||| |||||||| ||||| |||||| |||| |||| ||||||||||||||| |||| || |||| | || |||||    
T  141349 tctccaaaacataaataaatctaggatagacaatctataataaatcataa-gaca-acattctagatcagagcctatcctacgattctacgaaaccgata 141252  T
Q  177 acagagatagctcccgctatccaagcaa 204  Q
    || |||||||||||| ||||||||||||    
T  141251 acggagatagctccccctatccaagcaa 141224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 19923 - 19759
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||| ||||| || || ||||||||||| ||||||||| || || ||||||| || || | | |||||||| ||||||||||  ||||||    
T  19923 acataatcataaaatttctccaagtcccgacaaatgggtaaatctcca-aatatgaataaatccaaaacagataatctagagtaatcataaa--cagaca 19827  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     |||||||||||| ||| ||||  || |||| || || ||| | ||||||||||||||||||||||||||    
T  19826 -cctagatcagagtctatcctat-accctaaagacacaatagcggagatagctcccgctatccaagcaac 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 29499 - 29335
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||| ||||||||| ||||| || || ||||||||||| ||||||||| || || ||||||| || || | | |||||||| ||||||||||  ||||||    
T  29499 acataatcataaaatttctccaagtcccgacaaatgggtaaatctcca-aatatgaataaatccaaaacagataatctagagtaatcataaa--cagaca 29403  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
     |||||||||||| ||| ||||  || |||| || || ||| | ||||||||||||||||||||||||||    
T  29402 -cctagatcagagtctatcctat-accctaaagacacaatagcggagatagctcccgctatccaagcaac 29335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 7368 - 7440
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  7368 aactaatcctgcacaacgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 56145 - 56201
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  56145 cgtctacccatccatacagacaggtaggcggtccatcacagatccactaggggtaag 56201  T

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Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 104116 - 104183
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaa-cgataacagagatagctcccgctatccaagcaa 204  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||||||||||||| |||||||||||    
T  104116 cctagatcagagcctaccct-agactctaaggaaaccgataccggagatagctcccgatatccaagcaa 104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 4736 - 4638
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||| |||| ||| | ||||||| ||||| ||||| ||||||| ||||    
T  4736 gaaacgataacagagattagctcccactatccaagca-ctcaccaaaagcaaactactcctgcactctgtctaccaattcatacaaataggtaggtggtc 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 11959 - 12045
Alignment:
Q  117 ataatcataaagacagacatcctagatcagagcctaccctaagactctaa-ggaaacgataacagagatagctcccgctatccaagca 203  Q
    ||||||||||| ||  |||||||| |||||||||||  ||||||||| || |||||||| ||| ||||||||||||||||||||||||    
T  11959 ataatcataaaaaccaacatccta-atcagagcctaatctaagactccaaaggaaacgacaacggagatagctcccgctatccaagca 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 11509 - 11657
Alignment:
Q  43 cataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctaga 142  Q
    ||||||| ||||| || || ||||||||||| |||||||  |||||| ||||||| || || ||| ||||||| ||||||||||  ||||||| ||||||    
T  11509 cataaaagttctccaagtcccgacaaatgggtaaatctc--caacatgaataaatccaaaacaaataatctag-ataatcataa--acagaca-cctaga 11602  T
Q  143 tcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatcc 198  Q
    |||||||||| ||| ||||||||   || ||||| | ||||||||||||| |||||    
T  11603 tcagagcctatcct-agactctacaaaaccgataccggagatagctcccgatatcc 11657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 7080 - 6989
Alignment:
Q  200 agcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagctt 292  Q
    ||||||||||| ||||||| |||||||| |||  ||||||||||| || ||| |||||||||||||||||||| |||||||| | |||||||||    
T  7080 agcaactcacc-aaagcaa-ctaatcctgcacaacgtctacccatccatacagacaggtaggcggtccatcactgatccactggtggtaagctt 6989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 198
Target Start/End: Complemental strand, 2226 - 2072
Alignment:
Q  36 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagaca 135  Q
    |||||| ||||||| |||||||| || ||||||||||| |||||||  |||||| ||||||| || |||| | ||||||| ||||||   || |||||||    
T  2226 acatcaacataaaagttctctaagtcccgacaaatgggtaaatctc--caacatgaataaatccaaaatagataatctag-ataatc---aaaacagaca 2133  T
Q  136 tcctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatcc 198  Q
     |||||||||||||||| ||| ||| |||| | ||| |||| | ||||||||||||| |||||    
T  2132 -cctagatcagagcctatcct-agattctacgaaaatgataccggagatagctcccgatatcc 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 247
Target Start/End: Complemental strand, 73304 - 73201
Alignment:
Q  142 atcagagcctaccctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctac 240  Q
    |||||||| ||  ||||||||| ||| ||||||||||  |||| |||||||||||||||||| ||||||| ||||| ||||| || | ||| ||||||||    
T  73304 atcagagcttaatctaagactcaaag-aaacgataacgaagattagctcccgctatccaagc-actcaccaaaagc-aactactcttgcactccgtctac 73208  T
Q  241 ccattca 247  Q
    |||||||    
T  73207 ccattca 73201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 5325 - 5397
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| | ||| ||||||||||||||||||||||||||||||||    
T  5325 aactaatcctgcacaacgtctacccatccatacagataggcaggcggtccatcacagatccactaggggtaag 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 2398 - 2470
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||  || ||| ||||||||||||||||||||||||||||| ||||||||    
T  2398 aactaatcctgcacaacgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 5262 - 5334
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||  || ||| ||||||||||||||||||||||||||||| ||||||||    
T  5262 aactaatcctgcacaacgtctacccacccatacagacaggtaggcggtccatcacagatccactcggggtaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 267 - 323
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||| ||||||||||||||||||||    
T  267 cgtctacccatccatacagataggcaggcggtccataacagatccactaggggtaag 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 30977 - 31033
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  30977 cgtctacccatccatacagacaggtaggcggtccatcacagatccacttggggtaag 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 19507 - 19617
Alignment:
Q  155 ctaagactctaaggaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaa 252  Q
    ||||||||| ||| ||||||||||  |||| ||||| |||||||||| || |||||| ||||||||||| | || ||| |||||||| |||||| |||||    
T  19507 ctaagactccaag-aaacgataacgaagattagctctcgctatccaaaca-ctcaccaaaagcaaactactactgcactccgtctacacattcatacaaa 19604  T
Q  253 caggtaggcggtc 265  Q
    |||||||||||||    
T  19605 caggtaggcggtc 19617  T

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Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 77521 - 77593
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  || |||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  77521 aactaatcctgcacaacgactacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 77593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 91079 - 91023
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||    
T  91079 cgtctacccatccatacagacaggtaggcggtccatcacagatccactgggggtaag 91023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 70316 - 70249
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||||||||||||| |||| ||| |||| || ||||||   ||||||||||||||||||||||||||    
T  70316 cctagatcagagcctatccta-gaccctaaagacacgatagtggagatagctcccgctatccaagcaac 70249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 45574 - 45477
Alignment:
Q  168 gaaacgataacagagat-agctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||| ||||| |||||||| |||||||||| ||| || ||||||||||| || | ||| ||||||||| ||||| ||||||||||||||||||    
T  45574 gaaacgataacggagattagctcccgttatccaagca-ctcgcc-aaagcaaactactcatgcactccgtctacctattcatacaaacaggtaggcggtc 45477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 11564 - 11618
Alignment:
Q  212 aaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||| |||||||  ||||||||||||||| ||||||||||||||||||    
T  11564 aaagcaaactactcctacaatccgtctacccattcatacaaacaggtaggcggtc 11618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 55653 - 55734
Alignment:
Q  184 tagctcccgctatccaagcaactcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||| ||||||||| |||||| ||||||||||| |||| |||  ||||||| |||||| | ||||||||||||||||    
T  55653 tagctcccgcaatccaagca-ctcaccaaaagcaaactactcctgcacttcgtctactcattcatagaaacaggtaggcggtc 55734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 4172 - 4238
Alignment:
Q  197 ccaagcaactcaccgaaagc-aaactaatcctacacgccgtctacccattca-acaaacaggtaggc 261  Q
    |||||||||||||||||||| |||||| |||| ||| |||| |||||||||| ||||||||||||||    
T  4172 ccaagcaactcaccgaaagcaaaactactcctgcactccgtttacccattcatacaaacaggtaggc 4238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 3585 - 3665
Alignment:
Q  216 caaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||| | || ||||||||||||||||||| ||||| || ||||||||||| |||| | ||||||||||| |||||||||    
T  3585 caaactatttctgcacgccgtctacccattcatacaaatagttaggcggtccaccacata-ccactaggggttagcttcaca 3665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 10199 - 10138
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatcca 278  Q
    |||||||||| |||  ||||||||||| || ||||| |||||||||||||||||||||||||    
T  10199 aactaatcctgcacaacgtctacccatccatacaaataggtaggcggtccatcacagatcca 10138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 5577 - 5629
Alignment:
Q  216 caaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtcca 267  Q
    |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||    
T  5577 caaactaatcatgcacgccgtctacccattcatacaaataggtaggcggtcca 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 13323 - 13263
Alignment:
Q  206 tcaccgaaagcaaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    ||||||||||||||||| | ||||||  |||||||||||||| ||| ||||||||||||||    
T  13323 tcaccgaaagcaaactatttctacacttcgtctacccattcatacagacaggtaggcggtc 13263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 744 - 688
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||||||||||||||||||||||||||| ||||||||    
T  744 cgtctacccatccatacagataggtaggcggtccatcacagatccactgggggtaag 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 8616 - 8695
Alignment:
Q  217 aaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||||| |||||||| ||| |||||| ||||| |||||||||||||| |||||| ||| | ||||| |||||||||    
T  8616 aaactaatcctgcacgccgtttacacattcatacaaataggtaggcggtccaccacaga-ccattgggggttagcttcaca 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 27889 - 27945
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||||||| ||||||||    
T  27889 cgtctacccatccatacagacaggtaggcggtccatcatagatccactgggggtaag 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 99293 - 99143
Alignment:
Q  43 cataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatcataaagacagacatcctaga 142  Q
    ||||||| ||||| || ||  |||||||||| ||||||| |  |||| ||||||| || |||| | |||||||| ||||||||||  |||||| ||||||    
T  99293 cataaaagttctccaagtcctgacaaatgggtaaatctcta--acatgaataaatccaaaatagataatctaga-taatcataaa--cagaca-cctaga 99200  T
Q  143 tcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaa 200  Q
    |||||||||| ||| |||||||| | || ||||| | || |||||||||| |||||||    
T  99199 tcagagcctatcct-agactctacgaaaccgataccggatatagctcccgatatccaa 99143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 17660 - 17730
Alignment:
Q  220 ctaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||| |||  ||||||||||| || ||| | ||||||||||||||||||||||||| | ||||||||    
T  17660 ctaatcctgcacaacgtctacccatccatacagagaggtaggcggtccatcacagatccaatgggggtaag 17730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 30608 - 30645
Alignment:
Q  252 acaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  30608 acaggcaggcggtccatcacagatccactgggggtaag 30645  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 4908 - 4836
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| | ||| || |||||||||||||||| ||||||||||||    
T  4908 aactaatcctccacaacgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 4836  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 15272 - 15193
Alignment:
Q  217 aaactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaagcttcaca 296  Q
    ||||||||| | ||| | |||| |||||||| | ||| ||||||||||||||||||||| ||||| ||||| |||||||||    
T  15272 aaactaatcatgcacactgtcttcccattcatataaataggtaggcggtccatcacaga-ccactgggggttagcttcaca 15193  T

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Target: scaffold0175 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 7196 - 7131
Alignment:
Q  137 cctagatcagagcctaccctaagactctaaggaaacgataacagagatagctcccgctatccaagcaac 205  Q
    |||||||||||||| | |||| ||||||||| | |||||| |||||||||||||| |||||||||||||    
T  7196 cctagatcagagcc-atccta-gactctaag-acacgatagcagagatagctcccactatccaagcaac 7131  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 33064 - 33108
Alignment:
Q  222 aatcctacacgccgtctacccattca-acaaacaggtaggcggtc 265  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||    
T  33064 aatcctacacgccgtctacccattcatacaaataggcaggcggtc 33108  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 49748 - 49676
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| | ||| || |||||||||||||||| ||||||||||||    
T  49748 aactaatcctccacaacgtctacccatccatacagataggcagtcggtccatcacagatctactaggggtaag 49676  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 24636 - 24580
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| ||| ||||||||||||||||| ||||||| ||||||||    
T  24636 cgtctacccatccatacagacatgtaggcggtccatcacaaatccacttggggtaag 24580  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 21421 - 21349
Alignment:
Q  218 aactaatcctacacgccgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    |||||||||| |||  ||||||||||| || ||| | | | ||||||||||||||||||||||| ||||||||    
T  21421 aactaatcctgcacaacgtctacccatccatacagatatgcaggcggtccatcacagatccactgggggtaag 21349  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 86210 - 86154
Alignment:
Q  234 cgtctacccattca-acaaacaggtaggcggtccatcacagatccactaggggtaag 289  Q
    ||||||||||| || ||| | ||| ||||||||||||||||||||||| ||||||||    
T  86210 cgtctacccatccatacagataggcaggcggtccatcacagatccactgggggtaag 86154  T

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