View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17107_high_9 (Length: 299)
Name: NF17107_high_9
Description: NF17107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17107_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 37430429 - 37430699
Alignment:
| Q |
18 |
gatagaactaggtgtactagtttagaggatatcgccactccaaaacaatgggtaatcccttttgagccgtctttatttatgaatggaatctcatttcttt |
117 |
Q |
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| T |
37430429 |
gatagaactaggtgtactagtttagaggatatcgccactccaaaacaatgggtaatcccttttgagccgtctttatttatgaatggaatctcatttcttt |
37430528 |
T |
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| Q |
118 |
cgaccaaaaagaaatgcannnnnnnaacccaacaaaaacacctttcgctagaggggcgcgagtatattatgttgaatacatagagtatattaatctctct |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37430529 |
cgaccaaaaagaaatgcatttttttaacccaacaaaaacacctttcgctagaggggcgcgagtatattatgttgaatacatagagtatattaatctctct |
37430628 |
T |
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| Q |
218 |
tactcaactgatagctagttaaggatgtaagcaactaaagagaagctagaacaaatagcctaaaccaatat |
288 |
Q |
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||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37430629 |
tactcaactgatagctagttaaggatggaagcaactaaagaaaagctagaacaaatagcctaaaccaatat |
37430699 |
T |
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