View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17108_high_28 (Length: 276)
Name: NF17108_high_28
Description: NF17108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17108_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 41771259 - 41770988
Alignment:
| Q |
1 |
tcctctttccacgcttaaatcatccattctcatcctcgcatcttcttccgttccacccagcatttcctgcacacaccacaatttcacattcacaaaaatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41771259 |
tcctctttccacgcttaaatcatccattctcatcctcgcatcttcttccgttccacccagcatttcctgcacacaccacaatttcacattcacaaaaatg |
41771160 |
T |
|
| Q |
101 |
aaattatt-aaattgacctaattaaagtgttgaaaattttaggcaacaaacctttgtcttctccttagtttcatctttcttgccagtcaagaaacccata |
199 |
Q |
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|||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41771159 |
aaattatttaaattgacctaattaaagtgttgagaattttaggcaacaaacccttgtcttctccttagtttcatctttcttgccagtcaagaaacccata |
41771060 |
T |
|
| Q |
200 |
gctctcttagcagcatctgcagctgaatccttcaactctccaagcttccccacggtggtatcctttgcttct |
271 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
41771059 |
gctctcttagcagcatctgcagctgaatccttcaactctccaagcttccccacggtggtatccttagcttct |
41770988 |
T |
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