View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1710_high_22 (Length: 235)
Name: NF1710_high_22
Description: NF1710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1710_high_22 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32686322 - 32686088
Alignment:
| Q |
1 |
cactgatccgatccgaaccaactttgggagtttttaagttaaatgagatccattgaaatagaccaagactaaaaaattaacttcattgcttgtattccat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32686322 |
cactgatccgatccgaaccaactttgggagtttttaagttaaatgagatccattgaaatagaccaagactaaaaaattaacttcgttgcttgtattccat |
32686223 |
T |
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| Q |
101 |
acttataaatttctcccacaaatccatagtcacgttacaatccctcaaaacacaaatgattgtttcctgaacttgcaaacatcttggacatacattagga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32686222 |
acttataaatttctcccacaaatccatagtcacgttacaatccctcaaaacacaaatgattgtttcctgaacttgcaaacatcttggacatacattagga |
32686123 |
T |
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| Q |
201 |
atttaggatcaaaattgccacaatacaatgctcct |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32686122 |
atttaggatcaaaattgccacaatacaatgctcct |
32686088 |
T |
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