View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1710_low_20 (Length: 249)

Name: NF1710_low_20
Description: NF1710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1710_low_20
NF1710_low_20
[»] chr2 (47 HSPs)
chr2 (17-172)||(27016887-27017044)
chr2 (187-234)||(32913488-32913535)
chr2 (187-233)||(4193098-4193144)
chr2 (187-233)||(8806127-8806173)
chr2 (187-233)||(25087296-25087342)
chr2 (187-233)||(31580429-31580475)
chr2 (187-233)||(36234259-36234305)
chr2 (188-233)||(4228384-4228429)
chr2 (188-233)||(21570183-21570228)
chr2 (187-232)||(41431290-41431335)
chr2 (190-233)||(30420930-30420973)
chr2 (187-230)||(32678897-32678940)
chr2 (190-233)||(38575263-38575306)
chr2 (187-233)||(1415819-1415865)
chr2 (187-233)||(3725441-3725487)
chr2 (187-233)||(7015485-7015531)
chr2 (191-233)||(7558713-7558755)
chr2 (187-233)||(8971402-8971448)
chr2 (187-233)||(9986116-9986162)
chr2 (187-233)||(20046856-20046902)
chr2 (187-229)||(22421993-22422035)
chr2 (187-229)||(27248925-27248967)
chr2 (187-229)||(33228762-33228804)
chr2 (187-233)||(34600475-34600521)
chr2 (187-228)||(2808247-2808288)
chr2 (188-229)||(3268610-3268651)
chr2 (190-233)||(40625834-40625877)
chr2 (190-233)||(45128453-45128496)
chr2 (187-233)||(83955-84001)
chr2 (187-229)||(26025270-26025312)
chr2 (187-233)||(33923967-33924013)
chr2 (187-222)||(4041386-4041421)
chr2 (190-233)||(12677246-12677289)
chr2 (190-232)||(4100593-4100635)
chr2 (187-233)||(5427661-5427707)
chr2 (191-233)||(8308356-8308398)
chr2 (187-233)||(9374337-9374383)
chr2 (187-229)||(12236832-12236874)
chr2 (187-233)||(21132093-21132139)
chr2 (187-233)||(31788718-31788764)
chr2 (187-233)||(32448409-32448455)
chr2 (188-233)||(30923250-30923295)
chr2 (188-233)||(31193129-31193174)
chr2 (188-225)||(33759977-33760014)
chr2 (188-233)||(38445428-38445473)
chr2 (187-219)||(12553961-12553993)
chr2 (190-222)||(17248943-17248975)
[»] chr8 (24 HSPs)
chr8 (187-233)||(4809228-4809274)
chr8 (187-233)||(9072982-9073028)
chr8 (187-233)||(14906697-14906743)
chr8 (187-233)||(29777483-29777529)
chr8 (190-233)||(11267272-11267315)
chr8 (187-233)||(9498373-9498419)
chr8 (187-233)||(33896350-33896396)
chr8 (187-233)||(34612068-34612114)
chr8 (188-233)||(23851269-23851314)
chr8 (188-233)||(44578294-44578339)
chr8 (187-233)||(1236487-1236533)
chr8 (187-233)||(30568110-30568156)
chr8 (187-229)||(43135358-43135400)
chr8 (187-233)||(44099710-44099756)
chr8 (196-233)||(11725944-11725981)
chr8 (189-233)||(19876462-19876506)
chr8 (197-233)||(37565663-37565699)
chr8 (188-232)||(43889899-43889943)
chr8 (187-233)||(35580684-35580730)
chr8 (188-233)||(9619132-9619177)
chr8 (197-233)||(6314918-6314954)
chr8 (201-233)||(25190868-25190900)
chr8 (189-233)||(40211091-40211135)
chr8 (189-233)||(45445602-45445646)
[»] chr7 (33 HSPs)
chr7 (187-233)||(1485030-1485076)
chr7 (187-233)||(14627672-14627718)
chr7 (187-233)||(26492622-26492668)
chr7 (187-233)||(42066836-42066882)
chr7 (188-233)||(34773968-34774013)
chr7 (188-233)||(45198808-45198853)
chr7 (187-233)||(2843015-2843061)
chr7 (187-229)||(12502026-12502068)
chr7 (187-229)||(12527660-12527702)
chr7 (187-233)||(20116838-20116884)
chr7 (187-233)||(26583967-26584013)
chr7 (187-233)||(46822272-46822318)
chr7 (188-233)||(32684925-32684970)
chr7 (188-233)||(35495950-35495995)
chr7 (189-233)||(433467-433511)
chr7 (198-233)||(7640560-7640595)
chr7 (187-226)||(21266656-21266695)
chr7 (190-233)||(22927647-22927690)
chr7 (187-229)||(1448606-1448648)
chr7 (187-233)||(23085778-23085824)
chr7 (190-232)||(42311536-42311578)
chr7 (187-232)||(23425147-23425192)
chr7 (188-228)||(19560258-19560298)
chr7 (187-229)||(6559138-6559180)
chr7 (187-233)||(28044547-28044593)
chr7 (187-233)||(32521703-32521749)
chr7 (187-233)||(39328585-39328631)
chr7 (188-233)||(12141099-12141144)
chr7 (188-233)||(48061676-48061721)
chr7 (187-219)||(24610050-24610082)
chr7 (190-226)||(35667009-35667045)
chr7 (190-222)||(37849107-37849139)
chr7 (197-233)||(46339311-46339347)
[»] chr6 (28 HSPs)
chr6 (187-233)||(4984341-4984387)
chr6 (187-233)||(8497225-8497271)
chr6 (187-233)||(23947091-23947137)
chr6 (187-233)||(25064493-25064539)
chr6 (190-233)||(7880879-7880922)
chr6 (187-229)||(7028116-7028158)
chr6 (187-233)||(12653201-12653247)
chr6 (187-233)||(17237060-17237106)
chr6 (187-232)||(8027892-8027937)
chr6 (190-233)||(7875821-7875864)
chr6 (187-233)||(606457-606503)
chr6 (187-233)||(16419415-16419461)
chr6 (191-233)||(17335010-17335052)
chr6 (188-229)||(4088721-4088762)
chr6 (188-233)||(35001847-35001892)
chr6 (189-233)||(4468809-4468853)
chr6 (188-224)||(12168944-12168980)
chr6 (202-233)||(8196196-8196227)
chr6 (188-222)||(1450528-1450562)
chr6 (187-233)||(3913365-3913411)
chr6 (187-233)||(14174862-14174908)
chr6 (187-233)||(14179398-14179444)
chr6 (187-233)||(28634887-28634933)
chr6 (187-233)||(32327011-32327057)
chr6 (190-232)||(34489459-34489501)
chr6 (188-229)||(12059548-12059589)
chr6 (188-233)||(12170721-12170766)
chr6 (187-219)||(29319668-29319700)
[»] chr5 (37 HSPs)
chr5 (187-233)||(7242043-7242089)
chr5 (187-233)||(7247218-7247264)
chr5 (187-233)||(10649901-10649947)
chr5 (187-233)||(21060057-21060103)
chr5 (187-233)||(34881976-34882022)
chr5 (188-233)||(781647-781692)
chr5 (187-232)||(19280711-19280756)
chr5 (189-233)||(18677242-18677286)
chr5 (187-229)||(7150109-7150151)
chr5 (191-233)||(8771959-8772001)
chr5 (187-233)||(27752184-27752230)
chr5 (187-233)||(30371880-30371926)
chr5 (188-233)||(3271177-3271222)
chr5 (188-233)||(41184216-41184261)
chr5 (188-233)||(43008090-43008135)
chr5 (190-233)||(35475115-35475158)
chr5 (187-233)||(4954251-4954297)
chr5 (187-233)||(14726252-14726298)
chr5 (187-233)||(16981551-16981597)
chr5 (187-233)||(27266633-27266679)
chr5 (187-233)||(38007608-38007654)
chr5 (187-229)||(43148990-43149032)
chr5 (188-233)||(19259587-19259632)
chr5 (202-233)||(42580147-42580178)
chr5 (187-233)||(6011929-6011975)
chr5 (187-233)||(7886714-7886759)
chr5 (187-233)||(9113516-9113562)
chr5 (187-229)||(30299107-30299149)
chr5 (188-222)||(36057103-36057137)
chr5 (187-220)||(2057608-2057641)
chr5 (188-233)||(24229576-24229621)
chr5 (188-229)||(35851052-35851093)
chr5 (187-219)||(177754-177786)
chr5 (187-219)||(8088004-8088036)
chr5 (187-219)||(11073779-11073811)
chr5 (187-219)||(13422197-13422229)
chr5 (190-226)||(43261649-43261685)
[»] chr4 (37 HSPs)
chr4 (187-233)||(2115362-2115408)
chr4 (187-233)||(4644127-4644173)
chr4 (187-233)||(9284180-9284226)
chr4 (187-233)||(9528651-9528697)
chr4 (187-233)||(20569526-20569572)
chr4 (187-233)||(25274152-25274198)
chr4 (188-233)||(53616425-53616470)
chr4 (187-231)||(10389528-10389572)
chr4 (190-233)||(45227818-45227861)
chr4 (188-230)||(1532180-1532222)
chr4 (187-233)||(10359323-10359369)
chr4 (187-233)||(38706484-38706530)
chr4 (187-233)||(43444661-43444707)
chr4 (187-233)||(51318254-51318300)
chr4 (187-231)||(34024212-34024256)
chr4 (187-233)||(13634387-13634433)
chr4 (191-233)||(50766290-50766332)
chr4 (188-233)||(8670751-8670796)
chr4 (188-233)||(9645299-9645344)
chr4 (188-233)||(56199365-56199410)
chr4 (187-233)||(4142555-4142601)
chr4 (187-233)||(12265730-12265776)
chr4 (187-233)||(19853303-19853349)
chr4 (187-233)||(21686033-21686079)
chr4 (187-233)||(36161994-36162040)
chr4 (187-233)||(44947681-44947727)
chr4 (191-233)||(46990909-46990951)
chr4 (187-233)||(47320204-47320250)
chr4 (187-233)||(49680799-49680845)
chr4 (187-232)||(6155000-6155045)
chr4 (188-233)||(26633463-26633508)
chr4 (188-233)||(31381491-31381536)
chr4 (196-233)||(32952541-32952578)
chr4 (187-232)||(53444392-53444437)
chr4 (188-233)||(56040438-56040483)
chr4 (189-229)||(868436-868476)
chr4 (197-233)||(43153801-43153837)
[»] chr3 (30 HSPs)
chr3 (187-233)||(2342702-2342748)
chr3 (187-233)||(4178819-4178865)
chr3 (187-233)||(12116352-12116398)
chr3 (187-233)||(25162690-25162736)
chr3 (187-233)||(25631300-25631346)
chr3 (187-233)||(36906376-36906422)
chr3 (188-233)||(32607723-32607768)
chr3 (187-230)||(38854813-38854856)
chr3 (187-233)||(35498974-35499020)
chr3 (188-233)||(3848694-3848739)
chr3 (188-233)||(44907174-44907219)
chr3 (188-233)||(46934893-46934938)
chr3 (188-233)||(50611193-50611238)
chr3 (187-232)||(51202038-51202083)
chr3 (190-233)||(38440368-38440411)
chr3 (187-233)||(17238059-17238105)
chr3 (187-233)||(21533600-21533646)
chr3 (187-233)||(47041839-47041885)
chr3 (188-232)||(29503716-29503760)
chr3 (189-233)||(48650527-48650571)
chr3 (187-233)||(628715-628761)
chr3 (187-233)||(10108487-10108533)
chr3 (187-233)||(10233321-10233367)
chr3 (187-233)||(20464756-20464802)
chr3 (202-232)||(30648508-30648538)
chr3 (187-233)||(33580131-33580177)
chr3 (187-233)||(36910557-36910603)
chr3 (187-233)||(43017139-43017185)
chr3 (187-233)||(52922908-52922954)
chr3 (188-233)||(9998718-9998763)
[»] chr1 (46 HSPs)
chr1 (187-233)||(30879336-30879382)
chr1 (187-233)||(48217698-48217744)
chr1 (187-233)||(51868419-51868465)
chr1 (188-233)||(7342983-7343028)
chr1 (187-232)||(20266564-20266609)
chr1 (188-233)||(35584398-35584443)
chr1 (190-233)||(3871668-3871711)
chr1 (190-233)||(11709484-11709527)
chr1 (190-233)||(45805606-45805649)
chr1 (187-233)||(9686979-9687025)
chr1 (187-233)||(11454198-11454244)
chr1 (187-233)||(25406058-25406104)
chr1 (187-233)||(33291192-33291238)
chr1 (187-233)||(34519389-34519435)
chr1 (187-233)||(50148631-50148677)
chr1 (187-233)||(50165873-50165919)
chr1 (187-238)||(34878069-34878120)
chr1 (187-233)||(5324333-5324379)
chr1 (187-233)||(9172751-9172797)
chr1 (187-233)||(9180733-9180779)
chr1 (187-233)||(9919648-9919693)
chr1 (187-233)||(14545736-14545782)
chr1 (187-233)||(19715669-19715715)
chr1 (187-233)||(19723574-19723620)
chr1 (187-233)||(27914881-27914927)
chr1 (187-229)||(31837099-31837141)
chr1 (187-233)||(41081478-41081524)
chr1 (187-233)||(51872124-51872170)
chr1 (188-233)||(21687633-21687678)
chr1 (188-233)||(32676910-32676955)
chr1 (196-229)||(40646938-40646971)
chr1 (190-233)||(24583204-24583247)
chr1 (190-233)||(24583400-24583443)
chr1 (191-233)||(23289187-23289229)
chr1 (187-233)||(44915894-44915940)
chr1 (187-233)||(45425841-45425886)
chr1 (187-233)||(50271914-50271960)
chr1 (188-233)||(11462274-11462319)
chr1 (188-233)||(14872894-14872939)
chr1 (187-220)||(30712083-30712116)
chr1 (188-233)||(36894200-36894245)
chr1 (187-232)||(49504386-49504431)
chr1 (190-222)||(18569088-18569120)
chr1 (188-232)||(19596252-19596296)
chr1 (189-233)||(28035398-28035441)
chr1 (188-232)||(44637679-44637723)
[»] scaffold0311 (1 HSPs)
scaffold0311 (196-233)||(8948-8985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (188-233)||(83212-83257)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-233)||(201148-201193)
[»] scaffold0146 (1 HSPs)
scaffold0146 (187-233)||(16094-16140)
[»] scaffold0003 (1 HSPs)
scaffold0003 (188-233)||(361574-361619)
[»] scaffold0426 (1 HSPs)
scaffold0426 (190-233)||(6539-6582)
[»] scaffold0443 (1 HSPs)
scaffold0443 (196-233)||(4462-4499)


Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 27017044 - 27016887
Alignment:
Q  17 aatatctggttaatgaagatttaattgtaataccaaaattggctttaaaaaactattttatatgtcttaccctaaatcttttc--tctcaaacaaacaaa 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||    
T  27017044 aatatctggttaatgaagatttaattgtaataccgaaattggctttaaaaaactattttatatgtcttaccctaaatcttttctctctcacacacacaaa 27016945  T
Q  115 cattcatgctatgtgatcaaagattaaagatgaaatacaaggtcattcatacttcatt 172  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  27016944 cattcatgctatgtgatcaaagattaaagatggaatacaaggccattcatacttcatt 27016887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 32913535 - 32913488
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatct 234  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  32913535 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatct 32913488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 4193144 - 4193098
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4193144 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 4193098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 8806173 - 8806127
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  8806173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 8806127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 25087342 - 25087296
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25087342 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 25087296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 31580429 - 31580475
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31580429 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 31580475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 36234305 - 36234259
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36234305 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 36234259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 4228429 - 4228384
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 4228384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 21570183 - 21570228
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 21570228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 41431335 - 41431290
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  41431335 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 41431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 30420973 - 30420930
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattacatc 30420930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 32678897 - 32678940
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattac 230  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  32678897 gacaaaaataaaatgatattcattcattcaaatcgagagattac 32678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 38575263 - 38575306
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattacatc 38575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 1415865 - 1415819
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  1415865 gacaaaaacaaaatgatattcattcattcaaatcgatagattacatc 1415819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 3725487 - 3725441
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3725487 gacaaaaacaaaatgatattcatttattcaaatcgagagattacatc 3725441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 7015485 - 7015531
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  7015485 gacaaaaacaaaatgatatttattcattcaaatcgagagattacatc 7015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 7558755 - 7558713
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  7558755 aaaataaaatgatattcattcattcaaatcgagagattacatc 7558713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 8971402 - 8971448
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  8971402 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatc 8971448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9986116 - 9986162
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  9986116 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatc 9986162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 20046856 - 20046902
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  20046856 gacaaaaataaaatgatattcattcatttaaatcgagagattacatc 20046902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 22422035 - 22421993
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  22422035 gacaaaaacaaaatgatattcattcattcaaatcgagagatta 22421993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 27248925 - 27248967
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  27248925 gacaaaaacaaaatgatattcattcattcaaatcgagagatta 27248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 33228762 - 33228804
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  33228762 gacaaaaataaaatgatattcattcattcaaatcgagagatta 33228804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 34600521 - 34600475
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  34600521 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatc 34600475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 2808247 - 2808288
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatt 228  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  2808247 gacaaaaacaaaatgatattcattcattcaaatcgagagatt 2808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 3268610 - 3268651
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  3268610 acaaaaataaaatgatattcattcattcaaatcgagagatta 3268651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 40625834 - 40625877
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattacatc 40625877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 45128496 - 45128453
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  45128496 aaaaataaaatgatattcattaattcaaatcgagagattacatc 45128453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 83955 - 84001
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||    
T  83955 gacaaaaataaaatggtattcattcattcaaatcgagatattacatc 84001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 26025270 - 26025312
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  26025270 gacaaaaacaaaatgatattcattcattcaaattgagagatta 26025312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 33924013 - 33923967
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||    
T  33924013 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatc 33923967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 4041386 - 4041421
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcga 222  Q
    |||||||| |||||||||||||||||||||||||||    
T  4041386 gacaaaaataaaatgatattcattcattcaaatcga 4041421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 12677246 - 12677289
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||    
T  12677246 aaaaacaaaacgatattcattcattcaaatcgacagattacatc 12677289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 4100635 - 4100593
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||| |||| |||||||||||||||||||||| |||||||||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcgatagattacat 4100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 5427661 - 5427707
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  5427661 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 5427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 8308398 - 8308356
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| |||| |||||||||||||||||||||| ||||||||||    
T  8308398 aaaacaaaacgatattcattcattcaaatcgatagattacatc 8308356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9374337 - 9374383
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  9374337 gacaaaaacaaaacgatattcattcattcaaatcgacagagtacatc 9374383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 12236832 - 12236874
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  12236832 gacaaaaataaaatgatattcattcatttaaattgagagatta 12236874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 21132139 - 21132093
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||  ||||||||||||||||||||||||||| | ||||||||    
T  21132139 gacaaaatcaaaatgatattcattcattcaaatcgaaaaattacatc 21132093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 31788764 - 31788718
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  31788764 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 31788718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 32448409 - 32448455
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  32448409 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatc 32448455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 30923250 - 30923295
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatc 30923295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 31193129 - 31193174
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 31193174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 33759977 - 33760014
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagag 225  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  33759977 acaaaaacaaaataatattcattcattcaaatcgagag 33760014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 38445473 - 38445428
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 38445428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 12553961 - 12553993
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  12553961 gacaaaaataaaatgatattcattcattcaaat 12553993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 17248943 - 17248975
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcga 222  Q
    ||||| |||||||||||||||||||||||||||    
T  17248943 aaaaataaaatgatattcattcattcaaatcga 17248975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 4809274 - 4809228
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4809274 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 4809228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9073028 - 9072982
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9073028 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 9072982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 14906697 - 14906743
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14906697 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 14906743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 29777529 - 29777483
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29777529 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 29777483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 11267315 - 11267272
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  11267315 aaaatgaaaatgatattcattcattcaaatcgagagattacatc 11267272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9498373 - 9498419
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9498373 gacaaaaataaaatgatattcattcattcaaatcgagatattacatc 9498419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 33896396 - 33896350
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  33896396 gacaaaaataaaatgatatttattcattcaaatcgagagattacatc 33896350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 34612114 - 34612068
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34612114 gacaaaaataaaatgatattcattcattaaaatcgagagattacatc 34612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 23851269 - 23851314
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  23851269 acaaaaacaaaatgataatcattcattcaaatcgagagattacatc 23851314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 44578339 - 44578294
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  44578339 acaaaaataaaatgatattcatttattcaaatcgagagattacatc 44578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 1236487 - 1236533
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatc 1236533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 30568110 - 30568156
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||    
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatc 30568156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 43135358 - 43135400
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  43135358 gacaaaagcaaaatgatattcattcattcaaatcgagagatta 43135400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 44099710 - 44099756
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||    
T  44099710 gacaaaaacaaaatgatatttattcattcaaattgagagattacatc 44099756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 11725981 - 11725944
Alignment:
Q  196 aaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11725981 aaaatgatattcattcattcaaattgagagattacatc 11725944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 19876506 - 19876462
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||    
T  19876506 caaaaataaaatgatatttattcattcaaattgagagattacatc 19876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 37565663 - 37565699
Alignment:
Q  197 aaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||| |||||||||||||||||||    
T  37565663 aaatgatattcattcatgcaaatcgagagattacatc 37565699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 43889899 - 43889943
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||    
T  43889899 acaaaaacaaaatgatattcattcatttaaattgagagattacat 43889943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 35580730 - 35580684
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| || | |||||||||||||    
T  35580730 gacaaaaacaaaatgatattcattcatttaagttgagagattacatc 35580684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 9619132 - 9619177
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||||||    
T  9619132 acaaaaataaaattatattcattcattcaaattgagatattacatc 9619177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 6314954 - 6314918
Alignment:
Q  197 aaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||| || ||||||||||    
T  6314954 aaatgatattcattcattcaaattgatagattacatc 6314918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 25190868 - 25190900
Alignment:
Q  201 gatattcattcattcaaatcgagagattacatc 233  Q
    |||||||||||||||||||||| ||||||||||    
T  25190868 gatattcattcattcaaatcgatagattacatc 25190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 40211091 - 40211135
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| |||| |||||||||||||||||||||| ||| ||||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatc 40211135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 45445602 - 45445646
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| |||| ||||||||||||||||||||||  |||||||||    
T  45445602 caaaaacaaaacgatattcattcattcaaatcgatggattacatc 45445646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 1485030 - 1485076
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  1485030 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 1485076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 14627672 - 14627718
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14627672 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 14627718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 26492668 - 26492622
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  26492668 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 26492622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 42066836 - 42066882
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  42066836 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 42066882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 34774013 - 34773968
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 34773968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 45198808 - 45198853
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 45198853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 2843015 - 2843061
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||    
T  2843015 gacaaaaataaaatgatattcattcattcaaattgagagattacatc 2843061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 12502026 - 12502068
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  12502026 gacaaaaacaaaatgatattcattcattcaaatcgagagatta 12502068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 12527660 - 12527702
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  12527660 gacaaaaacaaaatgatattcattcattcaaatcgagagatta 12527702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 20116884 - 20116838
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||    
T  20116884 gacaaaaccaaaatgatattcattcattcaaatcgagagattacatc 20116838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 26584013 - 26583967
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  26584013 gacaaaaataaaatgatattcattcattcaaatcgtgagattacatc 26583967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 46822318 - 46822272
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  46822318 gacaaaaacaaaatgatattaattcattcaaatcgagagattacatc 46822272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 32684970 - 32684925
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatc 32684925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 35495950 - 35495995
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  35495950 acaaaaacaaaatgatattcaatcattcaaatcgagagattacatc 35495995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 433467 - 433511
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||    
T  433467 caaaaataaaaagatattcattcattcaaatcgagagattacatc 433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 7640560 - 7640595
Alignment:
Q  198 aatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  7640560 aatgatattcattcattcaaatcgagagattacatc 7640595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 21266695 - 21266656
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagaga 226  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21266695 gacaaaaacaaaatgatattcattcattcaaatcgagaga 21266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 22927647 - 22927690
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  22927647 aaaaataaaatgatattcattaattcaaatcgagagattacatc 22927690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 1448606 - 1448648
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  1448606 gacaaaaacaaaatgatattcattcattcaaatcgagatatta 1448648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 23085824 - 23085778
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  23085824 gacaaaaataaaattatattgattcattcaaatcgagagattacatc 23085778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 42311578 - 42311536
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  42311578 aaaaacaaaatgatattcatttattcaaatcgagagattacat 42311536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 23425147 - 23425192
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||    
T  23425147 gacaaaaacaaaatgatattcattcattcaaattaagagattacat 23425192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 19560298 - 19560258
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagatt 228  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  19560298 acaaaaataaaatgatattcattcatttaaatcgagagatt 19560258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 6559180 - 6559138
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  6559180 gacaaaaacaaaatgatattcattcatttaaattgagagatta 6559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 28044547 - 28044593
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  28044547 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 28044593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 32521703 - 32521749
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| ||||||||||||||||||||||  |||||||||    
T  32521703 gacaaaaataaaacgatattcattcattcaaatcgatggattacatc 32521749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 39328585 - 39328631
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| ||||||||||||||||||||||  |||||||||    
T  39328585 gacaaaaacaaaacgatattcattcattcaaatcgatggattacatc 39328631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 12141099 - 12141144
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 12141144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 48061721 - 48061676
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 48061676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 24610050 - 24610082
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  24610050 gacaaaaataaaatgatattcattcattcaaat 24610082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 35667009 - 35667045
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagaga 226  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  35667009 aaaaacaaaatgatattcattcattcaaatcaagaga 35667045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 37849139 - 37849107
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcga 222  Q
    ||||| |||||||||||||||||||||||||||    
T  37849139 aaaaataaaatgatattcattcattcaaatcga 37849107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 46339347 - 46339311
Alignment:
Q  197 aaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  46339347 aaatgatattctttcattcaaatcaagagattacatc 46339311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 4984341 - 4984387
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4984341 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 4984387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 8497271 - 8497225
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  8497271 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 8497225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 23947091 - 23947137
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  23947091 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 23947137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 25064539 - 25064493
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25064539 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 25064493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 7880879 - 7880922
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattacatc 7880922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 7028158 - 7028116
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7028158 gacaaaaacaaaatgatattcattcattcaaatcgagagatta 7028116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 12653247 - 12653201
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12653247 gacaaaaacaaaatgatattcattcatttaaatcgagagattacatc 12653201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 17237060 - 17237106
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||    
T  17237060 gacaacaacaaaatgatattcattcattcaaatcgagagattacatc 17237106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 8027892 - 8027937
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  8027892 gacagaaacaaaatgatattcattcattcaaatcgagagattacat 8027937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 7875821 - 7875864
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattacatc 7875864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 606503 - 606457
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatc 606457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 16419461 - 16419415
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||    
T  16419461 gacaaaaataaaatgatattcatttattcaaattgagagattacatc 16419415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 17335052 - 17335010
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  17335052 aaaaaaaaatcatattcattcattcaaatcgagagattacatc 17335010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 4088762 - 4088721
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  4088762 acaaaaacaaaatgatattcattcattcaaattgagagatta 4088721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 35001892 - 35001847
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||    
T  35001892 acaaaaataaaatgatattcattcattcaaatcaaaagattacatc 35001847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 4468853 - 4468809
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||    
T  4468853 caaaaacaaaatgatattcattcatttaaatcgagagtttacatc 4468809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 12168980 - 12168944
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgaga 224  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12168980 acaaaaataaaatgatattcattcattcaaatcgaga 12168944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Original strand, 8196196 - 8196227
Alignment:
Q  202 atattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||||||||||||    
T  8196196 atattcattcattcaaatcgagagattacatc 8196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 1450528 - 1450562
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcga 222  Q
    ||||||| |||||||||||||||||||||||||||    
T  1450528 acaaaaataaaatgatattcattcattcaaatcga 1450562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 3913365 - 3913411
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  3913365 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatc 3913411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 14174862 - 14174908
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| | ||||||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatc 14174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 14179398 - 14179444
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| | ||||||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatc 14179444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 28634887 - 28634933
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||| ||||||||||||||||||||||| || |||||||    
T  28634887 gacaaaaacaaactgatattcattcattcaaatcgataggttacatc 28634933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 32327011 - 32327057
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  32327011 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 32327057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 34489501 - 34489459
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattacat 34489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 12059548 - 12059589
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||    
T  12059548 acaaaaataaaatgatattcattcatttaaatcaagagatta 12059589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 12170766 - 12170721
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 12170721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 29319668 - 29319700
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  29319668 gacaaaaacaaaatgatattcattcattcaaat 29319700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 7242089 - 7242043
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7242089 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 7242043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 7247264 - 7247218
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7247264 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 7247218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 10649947 - 10649901
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  10649947 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 10649901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 21060057 - 21060103
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  21060057 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 21060103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 34882022 - 34881976
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  34882022 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 34881976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 781692 - 781647
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  781692 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 781647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 19280711 - 19280756
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  19280711 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 19280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18677242 - 18677286
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattacatc 18677286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 7150109 - 7150151
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7150109 gacaaaaataaaatgatattcattcattcaaatcgagagatta 7150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 8771959 - 8772001
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  8771959 aaaataaaatgatattcattcattcaaatcgagagattacatc 8772001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 27752230 - 27752184
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  27752230 gacaaaaacgaaatgatattcattcattcaaatcgagagattacatc 27752184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 30371926 - 30371880
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||    
T  30371926 gacaaaaacaaaatgatattcattcattcaaatagagagattacatc 30371880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 3271177 - 3271222
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  3271177 acaaaaacaaaatgataatcattcattcaaatcgagagattacatc 3271222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 41184216 - 41184261
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  41184216 acaaaaacaaaatgatatgcattcattcaaatcgagagattacatc 41184261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 43008090 - 43008135
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  43008090 acaaaaacaaaataatattcattcattcaaatcgagagattacatc 43008135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 35475115 - 35475158
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  35475115 aaaaataaaatgatattcattcattcaaattgagagattacatc 35475158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 4954297 - 4954251
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||    
T  4954297 gacaaaaataagatgatatttattcattcaaatcgagagattacatc 4954251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 14726252 - 14726298
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||    
T  14726252 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatc 14726298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 16981597 - 16981551
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  16981597 gacaaaaataaaatgatattcatttattcaaatcgagatattacatc 16981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 27266633 - 27266679
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||| ||||| |||||||||||||||||||||||||    
T  27266633 gacaaaaacaaaatggtattcgttcattcaaatcgagagattacatc 27266679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 38007654 - 38007608
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||    
T  38007654 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatc 38007608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 43149032 - 43148990
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  43149032 gacaaaaatacaatgatattcattcattcaaatcgagagatta 43148990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 19259587 - 19259632
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||    
T  19259587 acaaaaacaaaatgatatttatccattcaaatcgagagattacatc 19259632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 42580178 - 42580147
Alignment:
Q  202 atattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||||||||||||    
T  42580178 atattcattcattcaaatcgagagattacatc 42580147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 6011929 - 6011975
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  6011929 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 6011975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 7886714 - 7886759
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  7886714 gacaaaaacaaaacgatattcattcattcaaat-gagagattacatc 7886759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9113516 - 9113562
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  9113516 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 9113562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 30299149 - 30299107
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||    
T  30299149 gacaaaaataaaatgatattcattcatttaaatcgagatatta 30299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 36057103 - 36057137
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcga 222  Q
    ||||||| |||||||||||||||||||||||||||    
T  36057103 acaaaaataaaatgatattcattcattcaaatcga 36057137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 2057608 - 2057641
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatc 220  Q
    |||||||| |||||||||||||||||||||||||    
T  2057608 gacaaaaataaaatgatattcattcattcaaatc 2057641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 24229576 - 24229621
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 24229621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 35851093 - 35851052
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    ||||||| ||||||||||||||||||||||||| | ||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaatagatta 35851052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 177754 - 177786
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  177754 gacaaaaaaaaaatgatattcattcattcaaat 177786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 8088004 - 8088036
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  8088004 gacaaaaacaaaatgatattcattcattcaaat 8088036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 11073779 - 11073811
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  11073779 gacaaaaataaaatgatattcattcattcaaat 11073811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 13422229 - 13422197
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaat 219  Q
    |||||||| ||||||||||||||||||||||||    
T  13422229 gacaaaaacaaaatgatattcattcattcaaat 13422197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 43261649 - 43261685
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagaga 226  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43261649 aaaaacaaaatgatattcattcatttaaatcgagaga 43261685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 2115362 - 2115408
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2115362 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 2115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 4644173 - 4644127
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4644173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 4644127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9284226 - 9284180
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9284226 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 9284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9528651 - 9528697
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9528651 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 9528697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 20569572 - 20569526
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  20569572 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 20569526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 25274198 - 25274152
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25274198 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 25274152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 53616425 - 53616470
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 53616470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 10389528 - 10389572
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattaca 231  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  10389528 gacaaaaataaaatgatattcattcattcaaatcgagagattaca 10389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 45227818 - 45227861
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  45227818 aaaaaaaaaatgatattcattcattcaaatcgagagattacatc 45227861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 1532222 - 1532180
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattac 230  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  1532222 acaaaaataaaatgatattcattcattcaaatcgagagattac 1532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 10359323 - 10359369
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  10359323 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatc 10359369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 38706484 - 38706530
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38706484 gacaaaaacaaaatcatattcattcattcaaatcgagagattacatc 38706530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 43444707 - 43444661
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||    
T  43444707 gacaaaaataaaatgatattcattcattcaaattgagagattacatc 43444661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 51318300 - 51318254
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  51318300 gacaaaaataaaatgatattcattcatttaaatcgagagattacatc 51318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 34024212 - 34024256
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattaca 231  Q
    |||||||  ||||||||||||||||||||||||||||||||||||    
T  34024212 gacaaaagcaaaatgatattcattcattcaaatcgagagattaca 34024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 13634433 - 13634387
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  13634433 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatc 13634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 50766290 - 50766332
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  50766290 aaaacaaaatgatattcattcatttaaatcgagagattacatc 50766332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 8670796 - 8670751
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||    
T  8670796 acaaaaataaaacgatattcattcattcaaatcgatagattacatc 8670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 9645299 - 9645344
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  9645299 acaaaaacaaaataatatttattcattcaaatcgagagattacatc 9645344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 56199410 - 56199365
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||    
T  56199410 acaaaaataaaatggtattcattcattcaaatcgagagatcacatc 56199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 4142555 - 4142601
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  4142555 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 4142601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 12265776 - 12265730
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||| ||||||||||||||||||||||| || |||||||    
T  12265776 gacaaaaacaaactgatattcattcattcaaatcgataggttacatc 12265730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 19853303 - 19853349
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  19853303 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 19853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 21686033 - 21686079
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  21686033 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 21686079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 36162040 - 36161994
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  36162040 gacaaaaataaaatgatattcattcattcaaattgatagaatacatc 36161994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 44947727 - 44947681
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||  |||||||| ||||||||| ||||||||||||||||||    
T  44947727 gacaaaaatgaaatgataatcattcatttaaatcgagagattacatc 44947681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 46990909 - 46990951
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtacatc 46990951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 47320204 - 47320250
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  47320204 gacaaaaacaaaattatattcattcattcaaatcgatagaatacatc 47320250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 49680845 - 49680799
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| ||||||||||||| |||||||||| |||||||    
T  49680845 gacaaaaataaaataatattcattcatttaaatcgagaggttacatc 49680799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 6155000 - 6155045
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| |||||||||||||||||||||||| || ||| |||||    
T  6155000 gacaaaaacaaaatgatattcattcattcaaattgatagaatacat 6155045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 26633463 - 26633508
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 26633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 31381491 - 31381536
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||||  ||||| |||||||||||||||||||||||||    
T  31381491 acaaaaataaaatcttattcgttcattcaaatcgagagattacatc 31381536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 32952541 - 32952578
Alignment:
Q  196 aaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  32952541 aaaatgatattcattcattcaaatcgatagagtacatc 32952578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 53444437 - 53444392
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| ||||| |||||||||||||||||| || |||||||||    
T  53444437 gacaaaaacaaaataatattcattcattcaaatagatagattacat 53444392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 56040438 - 56040483
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 56040483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 868476 - 868436
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  868476 caaaaataaaatgatattcattcgtttaaatcgagagatta 868436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 43153801 - 43153837
Alignment:
Q  197 aaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  43153801 aaatgatatttattcattcaaatcgagagattgcatc 43153837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 2342748 - 2342702
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2342748 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 2342702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 4178865 - 4178819
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4178865 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 4178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 12116398 - 12116352
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  12116398 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 12116352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 25162736 - 25162690
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25162736 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 25162690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 25631300 - 25631346
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25631300 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 25631346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 36906422 - 36906376
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36906422 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 36906376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 32607768 - 32607723
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 32607723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 38854813 - 38854856
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattac 230  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  38854813 gacaaaaacaaaatgatattcattcattcaaatcgagagattac 38854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 35498974 - 35499020
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  35498974 gacaaaaataaaatgatattcattcattcaaatcgagggattacatc 35499020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 3848694 - 3848739
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||    
T  3848694 acaaaaataaaaagatattcattcattcaaatcgagagattacatc 3848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 44907174 - 44907219
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  44907174 acaaaaacaaaatgatattcattcattcaaatcgagatattacatc 44907219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 46934938 - 46934893
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  46934938 acaaaaataaaatgatattcattcattcaaatcgagagattgcatc 46934893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 50611193 - 50611238
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  50611193 acaaaaacaaaatgatattcattcattcaaatcgagatattacatc 50611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 51202038 - 51202083
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||    
T  51202038 gacaaaaacaaaatgatatttattcattcaaatcgagagattacat 51202083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 38440368 - 38440411
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  38440368 aaaaataaaatgatattcattcattcaaatcgaaagattacatc 38440411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 17238105 - 17238059
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||    
T  17238105 gacaaaaacaaaatgatattcattcattcaaattgagatattacatc 17238059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 21533600 - 21533646
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  21533600 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatc 21533646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 47041839 - 47041885
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||    
T  47041839 gacaaaaacaaaatgatattcattcattcaaatagatagattacatc 47041885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 29503760 - 29503716
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||    
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacat 29503716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 48650527 - 48650571
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatc 48650571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 628715 - 628761
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatc 628761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 10108533 - 10108487
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  10108533 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatc 10108487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 10233367 - 10233321
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  10233367 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatc 10233321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 20464756 - 20464802
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  20464756 gacaaaaacaaaatgatattcattcattcaaattgatagagtacatc 20464802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 30648508 - 30648538
Alignment:
Q  202 atattcattcattcaaatcgagagattacat 232  Q
    |||||||||||||||||||||||||||||||    
T  30648508 atattcattcattcaaatcgagagattacat 30648538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 33580177 - 33580131
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| || | |||||||||||||||||||||| ||||||||||    
T  33580177 gacaaaaacaagacgatattcattcattcaaatcgatagattacatc 33580131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 36910557 - 36910603
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  36910557 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatc 36910603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 43017185 - 43017139
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  43017185 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 43017139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 52922908 - 52922954
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  52922908 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 52922954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 9998763 - 9998718
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatc 9998718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 30879382 - 30879336
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30879382 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 30879336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 48217744 - 48217698
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  48217744 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 48217698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 51868419 - 51868465
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  51868419 gacaaaaataaaatgatattcattcattcaaatcgagagattacatc 51868465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 7343028 - 7342983
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  7343028 acaaaaataaaatgatattcattcattcaaatcgagagattacatc 7342983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 20266609 - 20266564
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  20266609 gacaaaaacaaaatgatattcattcattcaaatcgagagattacat 20266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 35584398 - 35584443
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  35584398 acaaaaacaaaatgatattcattcattcaaatcgagagattacatc 35584443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 3871711 - 3871668
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcgagagattacatc 3871668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 11709484 - 11709527
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  11709484 aaaaataaaatgatattcattcattcaaatcgagagattacatc 11709527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 45805606 - 45805649
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattacatc 45805649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 9686979 - 9687025
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9686979 gacaaaaacaaaatgatattcattcattcaaatcgagatattacatc 9687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 11454244 - 11454198
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  11454244 gacaaaaataaaatgatatttattcattcaaatcgagagattacatc 11454198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 25406058 - 25406104
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  25406058 gacaaaaataaaatgatattcattcattcaaatcgagatattacatc 25406104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 33291192 - 33291238
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33291192 gacaaaaataaaatgatattcattcatttaaatcgagagattacatc 33291238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 34519435 - 34519389
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  34519435 gacaaaaacaaaatgatattcattcattcaaatcgagggattacatc 34519389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 50148677 - 50148631
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||    
T  50148677 gacaaaaataaaatgatattctttcattcaaatcgagagattacatc 50148631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 50165873 - 50165919
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  50165873 gacaaaaataaaatgatattcattcatttaaatcgagagattacatc 50165919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 34878069 - 34878120
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatctgatg 238  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| ||||    
T  34878069 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatg 34878120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 5324333 - 5324379
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  5324333 gacaaaaacaaaatgttattcattcatttaaatcgagagattacatc 5324379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9172797 - 9172751
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  9172797 gacaaaaataaaaagatattcattcattcaaattgagagattacatc 9172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9180779 - 9180733
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  9180779 gacaaaaataaaaagatattcattcattcaaattgagagattacatc 9180733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9919693 - 9919648
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9919693 gacaaaaataaaatgatattcatt-attcaaatcgagagattacatc 9919648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 14545782 - 14545736
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||    
T  14545782 gacaaaaacaaaatgatattcattcgttcaaatagagagattacatc 14545736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 19715669 - 19715715
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||    
T  19715669 gacaaaaataaaatgatattcattcatttaaattgagagattacatc 19715715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 19723620 - 19723574
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  19723620 gacataaataaaattatattcattcattcaaatcgagagattacatc 19723574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 27914881 - 27914927
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  27914881 gacaaaaacaaaatgatattcattcattcaaatcaagatattacatc 27914927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 31837141 - 31837099
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagatta 229  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  31837141 gacaaaaacaaaatgatattcattcatttaaatcgagagatta 31837099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 41081478 - 41081524
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatc 41081524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 51872170 - 51872124
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| | |||||||||||||||||||||| |||||||||||||    
T  51872170 gacaaaaatagaatgatattcattcattcaaattgagagattacatc 51872124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 21687678 - 21687633
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgatagattacatc 21687633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 32676910 - 32676955
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  32676910 acaaaaataaaatgatatttattcattcaaatcaagagattacatc 32676955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 40646971 - 40646938
Alignment:
Q  196 aaaatgatattcattcattcaaatcgagagatta 229  Q
    ||||||||||||||||||||||||||||||||||    
T  40646971 aaaatgatattcattcattcaaatcgagagatta 40646938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 24583247 - 24583204
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatc 24583204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 24583443 - 24583400
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatc 24583400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 23289187 - 23289229
Alignment:
Q  191 aaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||| |||| |||||||||||||||||||||| ||||||||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattacatc 23289229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 44915940 - 44915894
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  44915940 gacaaaaataaaatgatattcattcattcaaattgatagagtacatc 44915894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 45425841 - 45425886
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||    
T  45425841 gacaaaaacaaaat-atattcattcattcaaattgagagattacatc 45425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 50271914 - 50271960
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| ||||| ||||| ||||||||||||||||| ||||||||    
T  50271914 gacaaaaataaaataatatttattcattcaaatcgagatattacatc 50271960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 11462274 - 11462319
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 11462319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 14872939 - 14872894
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  14872939 acaaaaacaaaatgatattcattcatttaaatcgatagagtacatc 14872894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 30712083 - 30712116
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatc 220  Q
    |||||||| |||||||||||||||||||||||||    
T  30712083 gacaaaaacaaaatgatattcattcattcaaatc 30712116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 36894200 - 36894245
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatc 36894245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 49504386 - 49504431
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    |||||||| |||| |||||||||||||||||||||| ||| |||||    
T  49504386 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacat 49504431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 18569088 - 18569120
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcga 222  Q
    ||||| |||||||||||||||||||||||||||    
T  18569088 aaaaacaaaatgatattcattcattcaaatcga 18569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 19596252 - 19596296
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||||| |||||||||||| |||||||||||| | |||||||||    
T  19596252 acaaaaacaaaatgatattcgttcattcaaatcaatagattacat 19596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 28035441 - 28035398
Alignment:
Q  189 caaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||    
T  28035441 caaaaataaaatgatattcattcattc-aattgagagattacatc 28035398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 44637723 - 44637679
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacat 232  Q
    ||||||| |||||||||||||||||||| |||||| ||| |||||    
T  44637723 acaaaaataaaatgatattcattcattccaatcgatagagtacat 44637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 8985 - 8948
Alignment:
Q  196 aaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8985 aaaatgatattcattcattcaaatcgagagattacatc 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 83212 - 83257
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatc 83257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 201148 - 201193
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatc 201193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 16094 - 16140
Alignment:
Q  187 gacaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||    
T  16094 gacaaaaacaaaatgatattcattcattcaaattgagatattacatc 16140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 361574 - 361619
Alignment:
Q  188 acaaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||| ||||||||||||||||||||| || |||||||||||||    
T  361574 acaaaaataaaatgatattcattcattcatattgagagattacatc 361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 6582 - 6539
Alignment:
Q  190 aaaaagaaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  6582 aaaaataaaataatattaattcattcaaatcgagagattacatc 6539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 4499 - 4462
Alignment:
Q  196 aaaatgatattcattcattcaaatcgagagattacatc 233  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  4499 aaaatgatattcattcatttaaatcaagagattacatc 4462  T

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