View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1710_low_7 (Length: 388)

Name: NF1710_low_7
Description: NF1710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1710_low_7
NF1710_low_7
[»] chr5 (55 HSPs)
chr5 (22-372)||(31786653-31787001)
chr5 (12-190)||(24886102-24886282)
chr5 (12-188)||(699152-699328)
chr5 (22-190)||(22974089-22974257)
chr5 (11-190)||(39572819-39572998)
chr5 (22-190)||(35511484-35511652)
chr5 (11-190)||(38528233-38528411)
chr5 (11-189)||(31705608-31705785)
chr5 (11-190)||(8741882-8742062)
chr5 (68-190)||(35826536-35826658)
chr5 (41-190)||(19119859-19120008)
chr5 (12-188)||(27318484-27318660)
chr5 (22-190)||(30969331-30969499)
chr5 (11-190)||(7693230-7693409)
chr5 (12-190)||(14919525-14919704)
chr5 (11-190)||(23116218-23116397)
chr5 (48-190)||(27330306-27330446)
chr5 (11-189)||(32563150-32563328)
chr5 (22-190)||(14409334-14409501)
chr5 (51-181)||(43308688-43308818)
chr5 (41-190)||(17158057-17158208)
chr5 (11-189)||(22980794-22980972)
chr5 (27-188)||(5837557-5837718)
chr5 (11-188)||(26268076-26268253)
chr5 (14-190)||(5112312-5112488)
chr5 (11-190)||(12910350-12910534)
chr5 (11-190)||(1429141-1429320)
chr5 (11-190)||(9200233-9200412)
chr5 (75-190)||(15724490-15724604)
chr5 (11-178)||(33908245-33908412)
chr5 (75-190)||(36860423-36860538)
chr5 (75-190)||(36866762-36866877)
chr5 (22-190)||(22255181-22255350)
chr5 (95-190)||(13956425-13956520)
chr5 (41-188)||(25500952-25501099)
chr5 (111-190)||(26317780-26317859)
chr5 (75-190)||(40133385-40133500)
chr5 (113-190)||(16004474-16004552)
chr5 (22-189)||(28416534-28416696)
chr5 (11-188)||(7208860-7209037)
chr5 (128-190)||(8466745-8466807)
chr5 (70-186)||(8436970-8437086)
chr5 (136-187)||(13380498-13380549)
chr5 (12-190)||(22019632-22019810)
chr5 (142-190)||(22616494-22616542)
chr5 (11-119)||(6824475-6824585)
chr5 (142-189)||(10237415-10237462)
chr5 (59-190)||(5829897-5830032)
chr5 (142-190)||(36055874-36055922)
chr5 (41-108)||(15992566-15992633)
chr5 (111-150)||(22255615-22255654)
chr5 (135-190)||(35933902-35933957)
chr5 (53-188)||(11898004-11898139)
chr5 (145-190)||(26411293-26411338)
chr5 (75-190)||(21088826-21088941)
[»] chr8 (46 HSPs)
chr8 (11-190)||(1150117-1150296)
chr8 (11-190)||(10555214-10555393)
chr8 (11-190)||(43643607-43643786)
chr8 (22-190)||(34894966-34895134)
chr8 (11-190)||(1204926-1205105)
chr8 (11-184)||(37970531-37970704)
chr8 (43-190)||(23854475-23854622)
chr8 (50-190)||(36695017-36695157)
chr8 (11-189)||(31933898-31934076)
chr8 (22-190)||(5299969-5300137)
chr8 (22-190)||(13307622-13307790)
chr8 (22-190)||(27082861-27083029)
chr8 (11-190)||(16446887-16447066)
chr8 (11-190)||(38643977-38644156)
chr8 (48-190)||(12876108-12876250)
chr8 (41-190)||(6098560-6098709)
chr8 (77-190)||(8803888-8803997)
chr8 (22-190)||(16222862-16223030)
chr8 (41-190)||(30654625-30654774)
chr8 (11-126)||(1149644-1149759)
chr8 (41-188)||(7890999-7891137)
chr8 (22-188)||(465843-466009)
chr8 (50-190)||(9864147-9864287)
chr8 (75-190)||(40862418-40862534)
chr8 (75-190)||(34952107-34952222)
chr8 (128-190)||(15009241-15009303)
chr8 (41-190)||(41362517-41362663)
chr8 (12-176)||(11727037-11727201)
chr8 (135-190)||(33906223-33906278)
chr8 (134-189)||(35459833-35459888)
chr8 (128-190)||(24823401-24823463)
chr8 (142-187)||(5018013-5018058)
chr8 (153-190)||(7998362-7998399)
chr8 (153-190)||(39099263-39099300)
chr8 (145-188)||(6446709-6446752)
chr8 (128-190)||(33197891-33197953)
chr8 (142-188)||(35735984-35736030)
chr8 (137-190)||(4133146-4133199)
chr8 (22-107)||(35459734-35459819)
chr8 (142-190)||(28220955-28221003)
chr8 (11-82)||(33906319-33906390)
chr8 (131-190)||(44869495-44869554)
chr8 (142-184)||(23176763-23176805)
chr8 (153-190)||(1954108-1954145)
chr8 (142-190)||(4108912-4108960)
chr8 (142-190)||(38110353-38110401)
[»] chr2 (51 HSPs)
chr2 (22-190)||(33551021-33551189)
chr2 (11-190)||(26357577-26357756)
chr2 (11-151)||(43648269-43648409)
chr2 (12-190)||(17054121-17054299)
chr2 (11-190)||(37905709-37905887)
chr2 (12-190)||(17071762-17071940)
chr2 (41-190)||(11366435-11366584)
chr2 (11-190)||(4264101-4264280)
chr2 (22-188)||(36641988-36642154)
chr2 (11-188)||(3176941-3177118)
chr2 (11-188)||(33660392-33660569)
chr2 (59-190)||(2325442-2325573)
chr2 (11-190)||(19424652-19424831)
chr2 (11-190)||(29242162-29242341)
chr2 (41-189)||(13711465-13711613)
chr2 (22-190)||(19289358-19289521)
chr2 (11-190)||(4166922-4167101)
chr2 (41-190)||(33902068-33902215)
chr2 (22-190)||(4478368-4478537)
chr2 (128-190)||(41465509-41465571)
chr2 (41-190)||(19313852-19314000)
chr2 (77-190)||(35958909-35959022)
chr2 (22-190)||(31570769-31570937)
chr2 (41-188)||(41463904-41464051)
chr2 (41-188)||(43770893-43771039)
chr2 (22-190)||(4763628-4763799)
chr2 (111-190)||(18494392-18494471)
chr2 (22-190)||(27349974-27350142)
chr2 (217-321)||(32308763-32308863)
chr2 (11-190)||(39167387-39167566)
chr2 (11-151)||(33709256-33709396)
chr2 (128-190)||(41960883-41960945)
chr2 (145-190)||(39788580-39788625)
chr2 (15-190)||(44913662-44913838)
chr2 (142-190)||(6177775-6177823)
chr2 (142-190)||(19093413-19093461)
chr2 (142-190)||(31861895-31861943)
chr2 (155-190)||(43446475-43446510)
chr2 (142-188)||(41643874-41643920)
chr2 (11-89)||(45327821-45327899)
chr2 (41-190)||(5881534-5881688)
chr2 (142-190)||(17245110-17245158)
chr2 (142-186)||(18947598-18947642)
chr2 (142-190)||(22963400-22963448)
chr2 (142-190)||(22998029-22998077)
chr2 (142-190)||(34441921-34441969)
chr2 (128-188)||(44285951-44286011)
chr2 (155-190)||(7007058-7007093)
chr2 (142-189)||(42005390-42005437)
chr2 (142-190)||(18514771-18514819)
chr2 (336-372)||(32308884-32308920)
[»] chr4 (60 HSPs)
chr4 (11-190)||(25184113-25184292)
chr4 (22-190)||(55477934-55478106)
chr4 (9-190)||(19089483-19089664)
chr4 (11-190)||(28003018-28003197)
chr4 (9-190)||(37663771-37663950)
chr4 (22-190)||(19440691-19440860)
chr4 (11-190)||(879580-879759)
chr4 (41-188)||(27396618-27396765)
chr4 (48-190)||(29584269-29584409)
chr4 (11-190)||(34361524-34361702)
chr4 (41-189)||(4597994-4598141)
chr4 (11-190)||(25701089-25701268)
chr4 (11-190)||(32912612-32912791)
chr4 (95-190)||(35021151-35021246)
chr4 (22-188)||(34948140-34948306)
chr4 (11-190)||(42199729-42199908)
chr4 (40-190)||(49375966-49376117)
chr4 (11-190)||(55241137-55241315)
chr4 (15-188)||(36493724-36493897)
chr4 (11-187)||(6864038-6864214)
chr4 (75-190)||(7703517-7703632)
chr4 (11-190)||(38011854-38012033)
chr4 (75-190)||(39397918-39398033)
chr4 (85-190)||(4205116-4205221)
chr4 (98-190)||(4396326-4396418)
chr4 (68-188)||(47253751-47253870)
chr4 (22-173)||(23761089-23761240)
chr4 (78-188)||(17167715-17167825)
chr4 (78-188)||(17173292-17173402)
chr4 (11-190)||(9139247-9139424)
chr4 (11-190)||(50697242-50697420)
chr4 (128-190)||(17272011-17272073)
chr4 (69-190)||(37287733-37287855)
chr4 (73-190)||(3042611-3042728)
chr4 (75-190)||(30002720-30002835)
chr4 (75-190)||(35025684-35025799)
chr4 (11-188)||(5047997-5048174)
chr4 (136-188)||(20097485-20097537)
chr4 (142-190)||(38812260-38812308)
chr4 (132-188)||(52516599-52516655)
chr4 (111-190)||(7152238-7152317)
chr4 (111-190)||(53124287-53124366)
chr4 (41-165)||(54499300-54499425)
chr4 (128-188)||(33341397-33341457)
chr4 (142-190)||(38811813-38811861)
chr4 (41-176)||(50764746-50764879)
chr4 (142-188)||(2266856-2266902)
chr4 (128-190)||(32579444-32579506)
chr4 (41-187)||(32592096-32592242)
chr4 (95-189)||(37775670-37775764)
chr4 (136-189)||(51204580-51204633)
chr4 (142-190)||(2704512-2704560)
chr4 (142-187)||(17612338-17612383)
chr4 (141-190)||(47073656-47073705)
chr4 (131-190)||(53337565-53337624)
chr4 (120-190)||(46884175-46884245)
chr4 (141-190)||(28293236-28293285)
chr4 (95-176)||(46888273-46888354)
chr4 (142-190)||(49878636-49878683)
chr4 (142-190)||(54995799-54995847)
[»] chr1 (56 HSPs)
chr1 (11-190)||(2959744-2959923)
chr1 (11-190)||(32267030-32267209)
chr1 (11-190)||(15382929-15383108)
chr1 (11-190)||(18422647-18422826)
chr1 (11-189)||(10922724-10922902)
chr1 (11-188)||(15752027-15752204)
chr1 (22-190)||(34012389-34012557)
chr1 (11-161)||(51128884-51129034)
chr1 (11-188)||(28769651-28769827)
chr1 (22-190)||(3309144-3309311)
chr1 (11-190)||(10182009-10182188)
chr1 (11-190)||(30254420-30254598)
chr1 (76-190)||(1547283-1547397)
chr1 (11-180)||(28564782-28564951)
chr1 (11-190)||(16415641-16415821)
chr1 (43-190)||(30326985-30327132)
chr1 (11-190)||(37618893-37619076)
chr1 (22-190)||(38823210-38823378)
chr1 (22-190)||(48620633-48620801)
chr1 (15-190)||(19899774-19899949)
chr1 (11-190)||(31621554-31621733)
chr1 (11-189)||(14758038-14758216)
chr1 (11-190)||(23999343-23999522)
chr1 (11-190)||(42721035-42721214)
chr1 (22-188)||(41926161-41926327)
chr1 (11-190)||(8222127-8222303)
chr1 (11-179)||(47279196-47279364)
chr1 (11-190)||(11742352-11742530)
chr1 (91-190)||(30254854-30254952)
chr1 (22-180)||(37451292-37451449)
chr1 (11-190)||(7079064-7079254)
chr1 (22-188)||(238525-238690)
chr1 (128-190)||(22170750-22170812)
chr1 (11-188)||(46931406-46931586)
chr1 (42-190)||(21289661-21289816)
chr1 (11-190)||(27227486-27227657)
chr1 (41-190)||(39393379-39393528)
chr1 (11-177)||(4330288-4330456)
chr1 (13-181)||(27763314-27763480)
chr1 (43-151)||(32216090-32216198)
chr1 (142-190)||(43579242-43579290)
chr1 (75-190)||(3534928-3535043)
chr1 (41-190)||(47682525-47682673)
chr1 (11-188)||(27563906-27564084)
chr1 (22-188)||(33725612-33725778)
chr1 (22-171)||(9903066-9903215)
chr1 (27-190)||(27267216-27267376)
chr1 (41-185)||(27533011-27533155)
chr1 (96-190)||(15168085-15168179)
chr1 (145-190)||(4150490-4150535)
chr1 (142-187)||(42663785-42663830)
chr1 (22-158)||(40884841-40884977)
chr1 (145-190)||(47279159-47279204)
chr1 (142-190)||(13876919-13876967)
chr1 (141-190)||(26970261-26970310)
chr1 (142-190)||(16132475-16132523)
[»] chr7 (47 HSPs)
chr7 (11-190)||(18797304-18797481)
chr7 (9-190)||(30055501-30055683)
chr7 (43-190)||(5657520-5657667)
chr7 (11-190)||(7334769-7334948)
chr7 (41-190)||(37109847-37109996)
chr7 (11-190)||(27283719-27283898)
chr7 (11-189)||(24211717-24211895)
chr7 (41-190)||(17842623-17842772)
chr7 (11-190)||(31579071-31579255)
chr7 (11-189)||(38258521-38258699)
chr7 (41-190)||(32821090-32821239)
chr7 (11-176)||(22687228-22687393)
chr7 (22-190)||(12390648-12390816)
chr7 (11-190)||(21991611-21991790)
chr7 (40-190)||(26524363-26524513)
chr7 (15-189)||(33688273-33688446)
chr7 (75-188)||(27421450-27421563)
chr7 (43-190)||(8861260-8861407)
chr7 (11-190)||(31520731-31520909)
chr7 (22-189)||(48928582-48928748)
chr7 (22-188)||(23111167-23111333)
chr7 (11-188)||(44413386-44413564)
chr7 (41-190)||(4582894-4583043)
chr7 (11-190)||(10481578-10481759)
chr7 (11-188)||(29173518-29173694)
chr7 (11-190)||(15612766-15612944)
chr7 (59-190)||(37346997-37347128)
chr7 (22-190)||(41765096-41765264)
chr7 (11-190)||(6546494-6546673)
chr7 (75-190)||(43686016-43686130)
chr7 (41-190)||(32432432-32432576)
chr7 (128-188)||(25691669-25691729)
chr7 (22-174)||(48928315-48928466)
chr7 (95-190)||(34362239-34362334)
chr7 (43-188)||(11071182-11071328)
chr7 (11-190)||(10359221-10359400)
chr7 (22-190)||(12165727-12165895)
chr7 (27-190)||(9355849-9356012)
chr7 (59-188)||(38053462-38053592)
chr7 (135-188)||(8299192-8299245)
chr7 (142-190)||(23402371-23402419)
chr7 (142-188)||(3953733-3953779)
chr7 (142-190)||(40381940-40381988)
chr7 (145-190)||(241024-241069)
chr7 (22-163)||(26980325-26980466)
chr7 (142-182)||(22955312-22955352)
chr7 (136-187)||(10675326-10675377)
[»] chr3 (64 HSPs)
chr3 (43-190)||(40552297-40552444)
chr3 (11-190)||(51212987-51213166)
chr3 (11-190)||(48354932-48355111)
chr3 (11-190)||(4761655-4761836)
chr3 (11-190)||(3655208-3655387)
chr3 (22-190)||(35844317-35844485)
chr3 (11-190)||(26941266-26941445)
chr3 (11-190)||(52040928-52041108)
chr3 (11-190)||(20373302-20373481)
chr3 (12-190)||(37203058-37203236)
chr3 (41-190)||(4015451-4015600)
chr3 (75-188)||(46297832-46297945)
chr3 (12-190)||(7327489-7327668)
chr3 (12-190)||(37157699-37157876)
chr3 (11-190)||(11466815-11466994)
chr3 (9-144)||(42506079-42506214)
chr3 (52-190)||(47481513-47481651)
chr3 (12-175)||(11357371-11357535)
chr3 (41-180)||(29099356-29099495)
chr3 (22-190)||(22450959-22451127)
chr3 (11-190)||(21193597-21193776)
chr3 (22-190)||(27480396-27480564)
chr3 (50-190)||(34132926-34133066)
chr3 (22-188)||(43975905-43976068)
chr3 (11-190)||(44186507-44186686)
chr3 (22-183)||(24488979-24489140)
chr3 (11-190)||(21009808-21009990)
chr3 (41-177)||(40935995-40936131)
chr3 (41-190)||(45174494-45174645)
chr3 (22-162)||(53176074-53176213)
chr3 (11-190)||(39282644-39282822)
chr3 (11-190)||(46994667-46994835)
chr3 (111-190)||(33698183-33698258)
chr3 (95-187)||(32373466-32373556)
chr3 (142-190)||(40640634-40640682)
chr3 (102-190)||(44891498-44891585)
chr3 (111-190)||(54505799-54505878)
chr3 (128-190)||(55343407-55343469)
chr3 (136-189)||(11835737-11835790)
chr3 (12-188)||(53229159-53229336)
chr3 (12-188)||(54828708-54828883)
chr3 (11-190)||(33378791-33378967)
chr3 (143-187)||(4556543-4556587)
chr3 (133-189)||(29163839-29163895)
chr3 (142-190)||(45879498-45879546)
chr3 (142-190)||(47930666-47930714)
chr3 (142-190)||(49359628-49359676)
chr3 (142-190)||(53811976-53812024)
chr3 (111-190)||(1089722-1089800)
chr3 (142-189)||(32180747-32180794)
chr3 (78-187)||(22446138-22446247)
chr3 (142-188)||(53818509-53818555)
chr3 (141-190)||(18272222-18272271)
chr3 (142-187)||(23165838-23165883)
chr3 (142-187)||(38392628-38392673)
chr3 (141-190)||(42204342-42204391)
chr3 (52-151)||(3362283-3362382)
chr3 (142-189)||(19606914-19606961)
chr3 (155-189)||(43348281-43348315)
chr3 (41-150)||(2007964-2008073)
chr3 (41-188)||(24708153-24708295)
chr3 (153-190)||(53175714-53175751)
chr3 (111-147)||(41585413-41585449)
chr3 (142-190)||(42665541-42665589)
[»] scaffold0291 (1 HSPs)
scaffold0291 (9-188)||(7889-8068)
[»] chr6 (23 HSPs)
chr6 (22-190)||(4318839-4319007)
chr6 (41-190)||(8513233-8513382)
chr6 (11-190)||(1945833-1946013)
chr6 (11-190)||(5627391-5627570)
chr6 (11-190)||(7235040-7235218)
chr6 (41-188)||(6088910-6089057)
chr6 (11-190)||(7055220-7055399)
chr6 (11-190)||(33893008-33893186)
chr6 (41-190)||(3879974-3880123)
chr6 (40-189)||(20768087-20768234)
chr6 (11-188)||(30353363-30353540)
chr6 (12-174)||(15491631-15491793)
chr6 (22-188)||(29182165-29182331)
chr6 (11-187)||(6091188-6091363)
chr6 (59-190)||(18498433-18498565)
chr6 (22-190)||(33618834-33619002)
chr6 (141-190)||(24662189-24662238)
chr6 (142-190)||(19631749-19631797)
chr6 (41-188)||(21017147-21017294)
chr6 (142-190)||(11084152-11084200)
chr6 (142-189)||(3005393-3005440)
chr6 (142-188)||(6614036-6614082)
chr6 (142-188)||(30338478-30338524)
[»] scaffold0002 (4 HSPs)
scaffold0002 (41-190)||(134-283)
scaffold0002 (11-136)||(408435-408559)
scaffold0002 (95-169)||(94473-94547)
scaffold0002 (138-190)||(408702-408754)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-188)||(146022-146199)
[»] scaffold0061 (1 HSPs)
scaffold0061 (48-188)||(43959-44099)
[»] scaffold0017 (1 HSPs)
scaffold0017 (48-188)||(154688-154828)
[»] scaffold0009 (2 HSPs)
scaffold0009 (111-190)||(42348-42427)
scaffold0009 (128-190)||(100821-100883)
[»] scaffold0318 (1 HSPs)
scaffold0318 (22-188)||(11908-12077)
[»] scaffold0262 (1 HSPs)
scaffold0262 (141-190)||(12137-12186)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 22 - 372
Target Start/End: Original strand, 31786653 - 31787001
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| || ||||| ||||||  || ||||||||||||||     | |||| |    
T  31786653 aaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcact 31786752  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttccnnnnnnnnttaaacactatt-tatacgaaac 220  Q
    ||||| || ||| ||||||||||||||||| | ||||||||||||||  ||||||| ||||||||||||        |||||||||||| ||||||||||    
T  31786753 acatttttcatgctatagtgttaacttcaccaaaaaagtcattctcactacttcactatagaattttccataaa---ttaaacactattgtatacgaaac 31786849  T
Q  221 atatttgacatcttagtggtaattccataacccatcaatttattattttgattttgattgatcaagttcataagtgaaaaattgcggttttgaattttaa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31786850 atatttgacatcttagtggtaattccataacccatcaatttattattttgattttgattgatcaagttcgtaagtgaaaaattgcggttttgaattttaa 31786949  T
Q  321 tnnnnnnnnnnnnggtgttagaatattacttgctcgttaagaagattaatct 372  Q
    |            |||||||||||||||||||| ||||||||||||||||||    
T  31786950 taaaaagaaaaaaggtgttagaatattacttgcccgttaagaagattaatct 31787001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 24886282 - 24886102
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| ||| ||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||||  |    
T  24886282 aaggtaggataaaattagattaagtgtagtcttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggt 24886183  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcac--tagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||| ||||||||||||| ||||||||||   | ||||||||||||||||| ||||||||| ||||||||    
T  24886182 gttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaattttcc 24886102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 699328 - 699152
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    ||||||||| |||| |||||||||||   |||||| |||||||||| |||||||   |||||||||||||| |||||| ||| ||||||||||||||  |    
T  699328 aaggtatgataaaattagattaagtgtagtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgtcactgtacaaacagtggggt 699229  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||| || ||| || ||| ||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||    
T  699228 gttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 22974089 - 22974257
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| | ||||||||||||||||   |||||  | ||||| |||||| | |||||||||||||||| ||||||||||||    
T  22974089 aaaattagattaagtgtagtcttgttattctgatgagttgatgataatatgagaattgaacttttgatgttattgtacaaacagtgggatgttactcatt 22974188  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || || |||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||||    
T  22974189 acttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcc 22974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 39572998 - 39572819
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| || ||||  ||||||  ||||||| |||||| ||| || ||||||||||||     
T  39572998 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaatttatgatactatgagaactgaacttttgatgtcactgcacaaacagtggag 39572899  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||||| || || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39572898 tgttactcacaacattttttatattatagtattaacttaactagaaaagtcattctcatgacttcaccatagaattttcc 39572819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 35511484 - 35511652
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| ||| |||   |||||||||||||| |||||| ||| | ||||||||||||| ||||||||| |    
T  35511484 aaaattagattaagtgtagtcttgttaatctgatgaattggtgatagtatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcact 35511583  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| ||||||||||||| |||||||||||  ||||| |||||| ||||||||||||||||| |||||||    
T  35511584 acagtgttgatgttataatgttaacttcatcagaaacgtcattttcatgacttcaccataggattttcc 35511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 38528233 - 38528411
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||| |||| ||||| |||      
T  38528233 caaggtaagataaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatga-gactgaacttttgatgtcactgtataaacaatgggg 38528331  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||| | |||||||||||||||||||||||  ||||||  |||| |||||||||||||||||||||||||    
T  38528332 tgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgacttcaccatagaattttcc 38528411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 31705608 - 31705785
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| |||||||||| |||||||  ||| || ||||| || |||||| ||||||||||||| || |      
T  31705608 caaggtatgataaaattagattaagtgtagtcttgttaatctgatgaattgatgatacta-gaggactggacttttgatgtcattgtacaaacggtaggg 31705706  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||| ||||||| |||||||||||||||||||||||| | |||| ||||| | ||||||||||||||||||||||    
T  31705707 tgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 8741882 - 8742062
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||| ||   |||||| ||| |||||| |||||||  |||||  |||||||| ||||||  ||||||||||||| |||      
T  8741882 caaggtatgacaaaattagattaattgtattcttgttaatttgatgaattgatgatactatggagactgaacttttgatgccattgtacaaacaatgggg 8741981  T
Q  111 -tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     |||||||||  ||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8741982 gtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 8742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 35826536 - 35826658
Alignment:
Q  68 ctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctc 167  Q
    |||||| |||||||| |||||| ||| |||||||||| || | ||||||||| |||||| ||||||||||||| |||||||||| | |||||||||| ||    
T  35826536 ctatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcattatc 35826635  T
Q  168 atgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||    
T  35826636 atgacttcaccatagaattttcc 35826658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 19120008 - 19119859
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||  |||||||| |||||| ||| ||||||||||||||  |||||||    ||| | |||||| ||||||    
T  19120008 tcttgttaatctgatgaattgatgacactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagt 19119909  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  19119908 gttaacttcaccacaaaagtcattctcatgacttcaccatagaattttcc 19119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 27318484 - 27318660
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| ||| |||||| |||||||  || |||  ||| ||| |||||| ||||||||||||||||||  |    
T  27318484 aaggtaggataaaattagattaagtgtagtcttgttaatatgatgaattgatgatactgtgagaactaaacttttgatgtcattgtacaaacagtggtgt 27318583  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||| |||||| || ||||| ||||||||||||||| |||||| ||||||||||||||||||| | |||||||    
T  27318584 gttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaatttt 27318660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 30969331 - 30969499
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| |||||||| ||| |||||  |||||||||      
T  30969331 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcaca 30969430  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||||||||||||||||||||| ||| || |||||||||||||||||   |||||||||||    
T  30969431 acacttttgatgttatagtgttaacttcaccagataaatcattctcatgacttcattgtagaattttcc 30969499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 7693409 - 7693230
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||| |   || ||| ||||| |||| |||||||  ||| || || ||||| ||||||  || |||||||||||||| |    
T  7693409 caaggtaagataaaattagattaagcgtattcatgttaatctaatgaattgatgatactaagaggattgaacttttgatgccactgtacaaacagtggga 7693310  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  7693309 tgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 14919525 - 14919704
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   | |||| ||| ||||||||||||||  |||||| |||||||| |||||| ||||| || ||||||||   |    
T  14919525 aaggtaggataaaattagattaagtgtagttttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattatataaacagtgaggt 14919624  T
Q  112 gttactcattacattgttgatgttatagtgttaacttca-ctagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||| ||||||||||| ||||||||||| | | |||| | |||||||||||||||||||| ||||||||    
T  14919625 gttactcattacatttttgatgttataatgttaacttcatcaaaaaaaataattctcatgacttcaccatataattttcc 14919704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 23116218 - 23116397
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  || |||| |||||||||| |||||||  |||||   ||||||| ||||||| || ||||||||||||||      
T  23116218 caaggtaggataaaattagattaagtgtaatattgttaatctgatgaattgatgatactatgtaaactgaacttttgattccactgtacaaacagtgggg 23116317  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || |||||| |||| | ||||||||||| |||||||||||  | |||||||||| ||||||| |||||||||||||||||    
T  23116318 tgctactcactacagttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtcaccatagaattttcc 23116397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 27330446 - 27330306
Alignment:
Q  48 aatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||| |||||||  |||||| |||||||| ||||||  |||||||||||||||    |||||||||  ||| | ||||||||||||||||||||    
T  27330446 aatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaact 27330349  T
Q  148 tcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  27330348 tcaccagaaaagtcattcccacgacttcaccatagaattttcc 27330306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 32563328 - 32563150
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||   || |  |||||||| |||||| ||| |||||| ||||||||     
T  32563328 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgtcactgtacagacagtggag 32563229  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||  ||| | |||||||||||||||||||||||  |||||| ||||| | ||||||||||||||||||||||    
T  32563228 tgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 14409334 - 14409501
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| ||||||  ||  |||  || |||||  || |||||| |    
T  14409334 aaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatga-gactgaacttttgatgccaccgtattaagagtggggtgctactcact 14409432  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  14409433 acatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 14409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 43308688 - 43308818
Alignment:
Q  51 ctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttca 150  Q
    |||||||||||||||  |||||| |||||||| ||||||  |||||||| ||||||||  ||||| |||||||||| ||||||||||| ||||||||| |    
T  43308688 ctgatgagttgatgatactatgaggactgaacttttgatgccattgtacgaacagtgg-gtgttattcattacatttttgatgttataatgttaacttta 43308786  T
Q  151 ct-agaaaagtcattctcatgacttcaccata 181  Q
    || | |||||||||||||||||||||||||||    
T  43308787 ctaaaaaaagtcattctcatgacttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 17158057 - 17158208
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| || ||||  |||| ||||| |||| |||||| ||||||||||||| ||||| |||||||||||||||| || ||||||||||    
T  17158057 tcttgttaatctgatgaattaatgatactataatgac-gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagt 17158155  T
Q  141 gttaacttcac---tagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||    | |||| ||||| | |||||||||||||||||||||||    
T  17158156 gttaacttcacaaaaaaaaaaatcatttttatgacttcaccatagaattttcc 17158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 22980972 - 22980794
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||| |||||| ||||||  ||||||||||      
T  22980972 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcattgctcaaacagtgggg 22980873  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    | ||||||| |  ||| |||||  ||||||||||||||||| ||||||||||||||||| |||||| |||| |||||||    
T  22980872 tattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattctcataacttcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 5837718 - 5837557
Alignment:
Q  27 tagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacatt 126  Q
    |||||||||||   |||||| ||| |||||| |||||||  |||||  |||||||  |||||| ||| ||||||||||||||  |||||||||  ||| |    
T  5837718 tagattaagtgtattcttgttaatatgatgaattgatgatactatggagactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacact 5837619  T
Q  127 gttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
     |||||| |||||||||| |||||| ||||||||||||||||||| |||||| |||||||||    
T  5837618 tttgatgctatagtgttaccttcaccagaaaagtcattctcatgaattcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 26268253 - 26268076
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| | |||||| ||   |||||| |||||||||| |||||||  |||||  |||| ||| |||||| |||  |||||||||||||      
T  26268253 caaggtatgataaaatttgattaattgtattcttgttaatctgatgaattgatgatactatgtggactaaacttttgatgtcaccgtacaaacagtgggg 26268154  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||  ||| | |||||| ||||||||||||||||| |||||| ||||||||||||||||||  |||||||||    
T  26268153 tgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttcactgtagaatttt 26268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 5112312 - 5112488
Alignment:
Q  14 ggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgt 113  Q
    ||||||| |||| ||||||||||    |||||| ||| | |||| |||||||  |||||  |||||||| ||||||  || ||||||||||||||  |||    
T  5112312 ggtatgataaaattagattaagtatagtcttgttaatttaatgaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgt 5112411  T
Q  114 tactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| || ||| || |||||||||| |||||||||| | |||||||||| |||||||||||||||| ||||||||    
T  5112412 tactcactatattttttatgttatagtattaacttcaccaaaaaagtcattttcatgacttcaccataaaattttcc 5112488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 12910534 - 12910350
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttc-----attgtacaaacag 105  Q
    ||||||| || |||| |||||||||||   || ||| |||||||||| |||| ||  |||||| |||||||| |||||| ||     | |||||||||||    
T  12910534 caaggtaggataaaattagattaagtgtagtcatgttaatctgatgaattgacgatactatgaggactgaacttttgatgtcactgtactgtacaaacag 12910435  T
Q  106 tggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||  |||||| || || ||| ||||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||||||    
T  12910434 tggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 12910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 1429141 - 1429320
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| ||| |||||| |||||||  |||||  |||||||  ||||||  || ||||||||||||||      
T  1429141 caaggtaggataaaattagattaaatgtagtcttgttaatttgatgaattgatgatactatggagactgaatttttgatgccagtgtacaaacagtgggg 1429240  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| || ||| |||||| ||||||||||||||||| | || ||||||| |||||||||||||||||| ||||||    
T  1429241 tgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgacttcaccatagatttttcc 1429320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 9200412 - 9200233
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| ||| |||||| |||||||  ||| || |||| ||| |||||| ||| ||||||||| ||||      
T  9200412 caaggtaggataaaattagattaaatgtattcttgttaatatgatgaattgatgatactaagaggactaaacttttgatgtcactgtacaaactgtgggg 9200313  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||    
T  9200312 tgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttattttaatgacttcaccataaaattttcc 9200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 15724604 - 15724490
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| |||||||| |||||||||  |||||||||  | | | |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  15724604 gactgaac-tttgatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataactt 15724506  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  15724505 caccatagaattttcc 15724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 33908412 - 33908245
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| |||||||  | |||||||  |||||| |||||||| ||||||  ||  ||||||||||||||     
T  33908412 caaggtatgataaaattagattaagtgcagtcttgttaatctgaataattgatgatactatgaggactgaacttttgatgccaccgtacaaacagtggag 33908313  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcacc 178  Q
    || |||||| |||| | |||||| ||||||||| ||||||| |||||  |||||||||||||||||||    
T  33908312 tgctactcactacacttttgatgatatagtgttgacttcaccagaaagttcattctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 36860538 - 36860423
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||||||||||||||||||  |||||||||  ||||| || ||  ||||||||||||||||| |||||| ||||| || ||||||    
T  36860538 gactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcattttcgtgactt 36860439  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  36860438 caccatagaattttcc 36860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 36866877 - 36866762
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| ||||||  |||||||||||||||||  |||||||||  | ||| ||||| |||||||||||||||||| |||||| ||||| || ||||||    
T  36866877 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgactt 36866778  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  36866777 caccatagaattttcc 36866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 22255350 - 22255181
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||   |||||  ||||||| ||||||  |||||||||||| ||||  |||||||||||    
T  22255350 aaaattagattaagtgtagtcttgttaatctgatgaattgatgataatatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcatt 22255251  T
Q  122 aca-ttgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| || ||||||||||| |||||||||||| | |||||| ||| | ||||||||||| |||| ||||||    
T  22255250 acattttttgatgttataatgttaacttcaccaaaaaagttatttttatgacttcaccgtagagttttcc 22255181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 13956425 - 13956520
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||   ||||||||| |||| | |||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||    
T  13956425 tgtacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcc 13956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 25500952 - 25501099
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  ||||   |||| ||| ||||||  || |||||||||||||   ||||| |||  ||| | |||||| ||||||    
T  25500952 tcttgttaatctgatgaattgatgatactatagggacttaacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagt 25501051  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||    
T  25501052 gttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 26317780 - 26317859
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||| ||| |||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  26317780 tgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcc 26317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 40133500 - 40133385
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| ||||||  ||||||||||| |||||  |||||||||  ||||| |||||  |||| |||||||||||| | |||||||||| || ||||||    
T  40133500 gactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgactt 40133401  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  40133400 caccatagaattttcc 40133385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 16004474 - 16004552
Alignment:
Q  113 ttactcattacattgttgatgttatagtgttaacttcactagaaaagtc-attctcatgacttcaccatagaattttcc 190  Q
    |||||||  ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  16004474 ttactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcc 16004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 28416534 - 28416696
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||   || |  || ||||| ||||||| || |||||||||||||| ||||||||||      
T  28416534 aaaattagattaagtgtattcttgttaatctgatgaattgatgatattaaggagattgaacttttgattccactgtacaaacagtgggatgttactcaca 28416633  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    | | | ||||| |||||||||||||||||||     | ||||||| ||||||||||||||||||||||    
T  28416634 atacttttgatattatagtgttaacttcact-----aatcattctaatgacttcaccatagaattttc 28416696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 7208860 - 7209037
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||| || |||||||| |||||| ||| ||||||||| || |      
T  7208860 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatgtcaatgtacaaacggtaggg 7208958  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttca-ctagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||| || |||| || |||||| | ||||||||||| | | |||||||||| | ||||||||||| |||||||||    
T  7208959 tgttactcgttgcattttttatgttacaatgttaacttcaccaaaaaaagtcatttttatgacttcaccgtagaatttt 7209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 8466807 - 8466745
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  8466807 ttgatgttacagtgttaacttcaccagaaaagtcattctcatgacctcatcatagaattttcc 8466745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 8437086 - 8436970
Alignment:
Q  70 atgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcat 169  Q
    |||| |||||||| |||||| ||| |||||||||| ||| |||||||||| |||| | | || | ||||||||||| ||||| | |||| ||||||||||    
T  8437086 atgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcat 8436987  T
Q  170 gacttcaccatagaatt 186  Q
    ||||||||  |||||||    
T  8436986 gacttcacattagaatt 8436970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 13380549 - 13380498
Alignment:
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 22019810 - 22019632
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| ||| ||||||  ||||||  ||| |  |||| ||| |||||| ||| | |||||||| |||  |    
T  22019810 aaggtaggataaaattagattaagtgtattcttgttaatatgatgaagtgatgatactaaggggacttaacttttgatgtcactatacaaacaatggggt 22019711  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||  ||| | |||||  |||||| |||||||||| |||||||||||||| || |||||||||||||| |||||    
T  22019710 gttactcacaacacttttgattctatagttttaacttcaccagaaaagtcattctaataacttcaccatagaaatttcc 22019632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 22616542 - 22616494
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 22616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 6824475 - 6824585
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactga--acgtttgatttcattgtacaaacagtgg 108  Q
    |||||||||| |||| |||||||||||   |||||| |||||||| | |||||||  |||||| ||||||  || |||||| ||| ||||||||||||||    
T  6824475 caaggtatgataaaattagattaagtgtattcttgttaatctgataaattgatgatactatgaagactgaacacttttgatgtcactgtacaaacagtgg 6824574  T
Q  109 aatgttactca 119  Q
    | |||||||||    
T  6824575 agtgttactca 6824585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 10237462 - 10237415
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  10237462 ttaacttcactagaaaagtcattttcatgacttcacaatagaattttc 10237415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 5830032 - 5829897
Alignment:
Q  59 ttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatg----ttatagtgttaacttcactag 154  Q
    |||||||  |||||| |||| ||| |||||| ||||||||||||| || |  |||||||||||||||| || |||    ||||| |||||||||||| |     
T  5830032 ttgatgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgttaattataatgttaacttcaccaa 5829933  T
Q  155 aaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| ||||| | | ||||||||| |||||||||||    
T  5829932 aaaaatcatttttacgacttcaccctagaattttcc 5829897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 36055874 - 36055922
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcc 36055922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 15992566 - 15992633
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||| ||||||||||||||    
T  15992566 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtacaaacagtgg 15992633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 22255654 - 22255615
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttca 150  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22255654 tgttactcattacatttttgatgttatagtgttaacttca 22255615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 35933957 - 35933902
Alignment:
Q  135 tatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||| ||||||||    
T  35933957 tatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcc 35933902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 11898139 - 11898004
Alignment:
Q  53 gatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcact 152  Q
    ||||| |||||||  |||||| |||| ||| |||||| ||| |||||||  ||| |  ||||||||| | || | |||||| |||| | ||||||| ||     
T  11898139 gatgaattgatgatactatgaggactaaacttttgatgtcactgtacaactagtagggtgttactcagtgcacttttgatgctataatattaactttacc 11898040  T
Q  153 agaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||| ||| ||||||||||||| || ||||||    
T  11898039 agaaaagttattatcatgacttcaccctaaaatttt 11898004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 26411338 - 26411293
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | |||| ||||||| |||||||||||||||||||||||    
T  26411338 acttcaccaaaaaaatcattctaatgacttcaccatagaattttcc 26411293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 21088826 - 21088941
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttca-ctagaaaagtcattctcatgact 173  Q
    |||||||| |||||| ||||||||||||||||||  ||| |||||  ||||| || ||  || ||| ||||||||| | | |||||||||| || |||||    
T  21088826 gactgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttttatactacagt-ttaacttcaccaaaaaaagtcattttcgtgact 21088924  T
Q  174 tcaccatagaattttcc 190  Q
    ||| | |||||||||||    
T  21088925 tcatcgtagaattttcc 21088941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 1150117 - 1150296
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||||||||||||||||  ||||||||||||||| |||||| || ||||||||||||||| |    
T  1150117 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcgttgtacaaacagtggga 1150216  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  1150217 tgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 1150296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 10555214 - 10555393
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| || ||||| |||||| |||||||||||||||||||     
T  10555214 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggag 10555313  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  10555314 tgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttcc 10555393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 43643607 - 43643786
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||| |||||   |||||| ||||||||||||||||||  |||||| || ||||| || ||| |||||||||||||||| ||     
T  43643607 caaggtaggataaaattagatcaagtgtagtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagag 43643706  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  43643707 tgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcc 43643786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 34895134 - 34894966
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||   |||||||||||||| ||||||  || | ||||||||||||| ||||||||| |    
T  34895134 aaaattagattaagtgtagtcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcact 34895035  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  34895034 acagtgttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcc 34894966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 1205105 - 1204926
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  ||||||| ||| ||||||  ||||||  |||||| |||||||| |||||| |||||||||||||||||       
T  1205105 caaggtaagataaaattagattaagtgtaatcttgttaatatgatgaactgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgatg 1205006  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  1205005 tgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcaccgtaaaattttcc 1204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 37970531 - 37970704
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||  |||| |||||||  |||||| | |||||| ||||||  |||||||||||||||||      
T  37970531 caaggtaggataaaattagattaagtgtagtcttgttaatcatatgaattgatgatactatgagggctgaacttttgatggcattgtacaaacagtgggg 37970630  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaa 184  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  37970631 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 23854475 - 23854622
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| ||||| ||||||||||||  |||||| |||||||| |||||| |||||| ||||||||| |  |||||||||||||||| || ||||||||||||    
T  23854475 ttgttaatctaatgagttgatgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgt 23854574  T
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| | |||||||||||||||||||||||| |||| ||||||    
T  23854575 taacttcaccaaaaaagtcattctcatgacttcaccgtagacttttcc 23854622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 36695017 - 36695157
Alignment:
Q  50 tctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttc 149  Q
    |||||||| |||||||  |||||  |||||||| |||||| ||||||||||||||||||  |||||||||  ||||| ||||| ||||||||||||||||    
T  36695017 tctgatgaattgatgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttc 36695116  T
Q  150 actagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |  |||||||||||| || ||||||||||||||||||||||    
T  36695117 atcagaaaagtcattttcctgacttcaccatagaattttcc 36695157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 31933898 - 31934076
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| |||| ||||| |||||||  |||| |||||||||| |||||| |||||||| ||| |||||      
T  31933898 caaggtatgataaaattagattaagtgtagtcttgttaatcggatgaattgatgatactataatgactgaacttttgatgtcattgtataaagagtgggg 31933997  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||||| ||| ||||| | |||||||||||||||| | |||| |||||||||| |||||||  ||||||||||    
T  31933998 tgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataacttcacgttagaattttc 31934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 5299969 - 5300137
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||| | |||||||| ||||||  || |||||||||||| || || |||| |      
T  5299969 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttaca 5300068  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  5300069 acacttttgatgctatagtgttaacttcattaaaaaagtcattctcatgacttcaccatagaattttcc 5300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 13307790 - 13307622
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||  |||||||||| ||||| |  |||||  |||||||| |||||| ||| |||||||| ||||   |||||||||      
T  13307790 aaaattagattaagtgtattcttgctaatctgatgaattgataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcaca 13307691  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13307690 acacttttgatgttatagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 13307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 27082861 - 27083029
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||  |||||| |||||||| ||| ||  || || |||||||||||  ||||||||| |    
T  27082861 aaaattagattaagtgtagtcttgttaatttgatgaattgatgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcact 27082960  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||| ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  27082961 acacttttgatgctatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttcc 27083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 16446887 - 16447066
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| || ||||||||   |||||| |||||||||| |||||||   ||||  |||| ||| ||||||  |||| ||||||||||||      
T  16446887 caaggtaggataaaattaaattaagtgtagtcttgttaatctgatgaattgatgatagtatggggactaaacttttgatgccattatacaaacagtgggg 16446986  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||| | ||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||    
T  16446987 tgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttcc 16447066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 38644156 - 38643977
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||| ||||||  || |  |||||||||||      
T  38644156 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggagactgaacttttgatgccactagacaaacagtgggg 38644057  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||    
T  38644056 tgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttcc 38643977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 12876250 - 12876108
Alignment:
Q  48 aatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||| |  |||||||||  ||||| || || ||||||||||||||    
T  12876250 aatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaact 12876151  T
Q  148 tcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||  |||||||||||| || |||||| |||||||||||||||    
T  12876150 tcatcagaaaagtcattttcgtgacttaaccatagaattttcc 12876108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 6098560 - 6098709
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||| ||  |||||  |||||||| |||||| ||| ||||||||||||||  ||||||||| || ||| |||||| ||||||    
T  6098560 tcttgttaatctgatgaattgacgatactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagt 6098659  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     |||||||||| | |||||| ||| |||||||||||||||||||||||||    
T  6098660 attaacttcaccaaaaaagttattttcatgacttcaccatagaattttcc 6098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 8803888 - 8803997
Alignment:
Q  77 ctgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttca 176  Q
    |||||| |||||| ||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||||| | |||||||||    |||||||||    
T  8803888 ctgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttca 8803983  T
Q  177 ccatagaattttcc 190  Q
    ||||||||||||||    
T  8803984 ccatagaattttcc 8803997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 16223030 - 16222862
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||| ||||| |||||||  |||||| |||||||| |||||| ||||||||||||| ||||     |||||| |    
T  16223030 aaaattagattaagtgtagtcttgttaatcggatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcact 16222931  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | ||| || ||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||    
T  16222930 atattttttatgttatagtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttcc 16222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 30654625 - 30654774
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| || |||||||  ||||||  |||||| | |||||| |||||| |||||  |||||||||||  |||||||||||||||| || ||||||||||    
T  30654625 tcttgttaacctgatgaagtgatgatactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagt 30654724  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||| ||| ||| |||||||||||||| ||||||||    
T  30654725 gttaacttcaccaaaaaaatcactcttatgacttcaccataaaattttcc 30654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 1149644 - 1149759
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||||||||||||||||  |||||| ||| |||| |||||| ||||||||||||||||||      
T  1149644 caaggtaagataaaattagattaagtgtagtcttgttaatctgatgagttgatgatactatgaggacagaacttttgatgtcattgtacaaacagtgggt 1149743  T
Q  111 tgttactcattacatt 126  Q
    ||||||||||||||||    
T  1149744 tgttactcattacatt 1149759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 7890999 - 7891137
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||   ||||| ||| |||| ||||||  |||||||||||| ||||| |||||         || |||||||||||||    
T  7890999 tcttgttaatctgatgaattgatgatattatgaggaccgaacttttgatgccattgtacaaacggtggagtgtta---------tttttgatgttatagt 7891089  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  7891090 gttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 466009 - 465843
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  ||| |  |||||||  ||||||  || ||||||||||||||  |||||||||      
T  466009 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactaaggggactgaatttttgatgccactgtacaaacagtggggtgttactcaca 465910  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||||||| ||||||||||||| | |||||||||| | |||||||||||||| ||||||    
T  465909 acacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 9864287 - 9864147
Alignment:
Q  50 tctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttc 149  Q
    |||||||| |||||||   ||||  |||||||| |||||| ||||||||||||||||||  |||||||||  ||||| |||||  ||||||||||| |||    
T  9864287 tctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttc 9864188  T
Q  150 actagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || | |||||||||| || ||||||||  ||||||||||||    
T  9864187 accaaaaaagtcattttcgtgacttcattatagaattttcc 9864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 40862534 - 40862418
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgtt-gatgttatagtgttaacttcactagaaaagtcattctcatgact 173  Q
    |||||||| ||||||  |||||||||||||||||  |||||||||  ||||| || ||| |||||||||||||||||| |||||||| ||| || |||||    
T  40862534 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgact 40862435  T
Q  174 tcaccatagaattttcc 190  Q
    |||| ||||||||||||    
T  40862434 tcactatagaattttcc 40862418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 34952107 - 34952222
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||| ||||||||||||||  |||||||||  ||| | |||||| |||||||||||||| || |||||||||||| | |||||||    
T  34952107 gactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaacttgaccagaaaagtcattttaatgactt 34952206  T
Q  175 caccatagaattttcc 190  Q
     || ||||||||||||    
T  34952207 tactatagaattttcc 34952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 15009303 - 15009241
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  15009303 ttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 15009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 41362663 - 41362517
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||| | |||||| |||||| ||| | |||||| |||||  ||||||||| |||||| || ||| ||  ||    
T  41362663 tcttgttaatctgatgaattgatgatactatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactacattttt-atgcta--gt 41362567  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||||||||| |||| ||||||||||||||||||||    
T  41362566 gttaacttcaccaaaaaagtcattttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 11727201 - 11727037
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||| ||   |||||| ||| |||||| |||||||   ||||| |||||||| ||||||  || | |||||| |||||  |    
T  11727201 aaggtaggataaaattagattaaatgtattcttgttaatttgatgaattgatgatattatgaggactgaacttttgatgccactatacaaatagtggggt 11727102  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttca 176  Q
    |||||| |  ||| | |||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  11727101 gttacttacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 33906278 - 33906223
Alignment:
Q  135 tatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  33906278 tatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcc 33906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 35459833 - 35459888
Alignment:
Q  134 ttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||| ||||||| || | |||||||||||||||||||||||||||||||||||    
T  35459833 ttatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 24823401 - 24823463
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||||||||||||||| | ||||||||||||||| |||| ||||||| |||||||    
T  24823401 ttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcc 24823463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 5018058 - 5018013
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 5018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 7998399 - 7998362
Alignment:
Q  153 agaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7998399 agaaaagtcattctcatgacttcaccatagaattttcc 7998362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 39099263 - 39099300
Alignment:
Q  153 agaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39099263 agaaaagtcattctcatgacttcaccatagaattttcc 39099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 6446709 - 6446752
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttt 6446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 33197953 - 33197891
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| |||||| ||||||| |  |||||| | |||||||||||||||||||||||||||||    
T  33197953 ttgatgctatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattttcc 33197891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 35735984 - 35736030
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 4133146 - 4133199
Alignment:
Q  137 tagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||| | |||||||||||| ||||||| |||||| ||||||||    
T  4133146 tagtgttaacttcaccaaaaaagtcattctgatgacttgaccataaaattttcc 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 35459734 - 35459819
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtg 107  Q
    |||| |||||||||||   |||||| ||||||||||||||||||   ||||| |||||||| ||| || ||||||||||| |||||    
T  35459734 aaaattagattaagtgtagtcttgttaatctgatgagttgatgatattatgaggactgaacttttaatgtcattgtacaatcagtg 35459819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 28220955 - 28221003
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||| ||||||||| | |||||||||||||    
T  28220955 ttaacttcaccagaaaagtcattttcatgactttatcatagaattttcc 28221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 33906390 - 33906319
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaac 82  Q
    |||||||||| |||| |||||||||||   |||||| |||||||||| |||||||  |||||| ||||||||    
T  33906390 caaggtatgataaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgaagactgaac 33906319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 44869554 - 44869495
Alignment:
Q  131 atgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||| | |||||| ||||| || | |||||| |||||||||||    
T  44869554 atgttatagtgttaacttcaccaaaaaagttattcttataatttcaccgtagaattttcc 44869495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 23176763 - 23176805
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaa 184  Q
    |||||||||| | |||||||||| |||||||||||||||||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaa 23176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 1954108 - 1954145
Alignment:
Q  153 agaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  1954108 agaaaagtcattatcataacttcaccatagaattttcc 1954145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 4108912 - 4108960
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || | |||||||||| |||||||||||||||| ||||||||    
T  4108912 ttaactttaccaaaaaagtcattttcatgacttcaccataaaattttcc 4108960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 38110401 - 38110353
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  |||||| ||||| |||||||||||||||| ||||||||    
T  38110401 ttaacttcatcagaaaaatcattttcatgacttcaccataaaattttcc 38110353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 33551021 - 33551189
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| ||| |||| |||||| ||||||||||||||||||  ||||||||| |    
T  33551021 aaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcact 33551120  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  33551121 acatttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttcc 33551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 26357756 - 26357577
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||||| |||||||| ||| |||||| ||||| | ||||| |  ||||||| |||||| ||| |||||||||||||| |    
T  26357756 caaggtaggataaaattagattaagtgtgatcttgttaatatgatgaattgataactctataagaactgaacttttgatgtcactgtacaaacagtggga 26357657  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||| | |||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  26357656 tgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccataaaattttcc 26357577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 43648269 - 43648409
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| ||||||||||||||||||  ||||||||||||||| |||||| ||||| |||||||||||       
T  43648269 caaggtatgataaaattagattaagtgtagtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcattatacaaacagtgagg 43648368  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcac 151  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  43648369 tgttactcattacatttttgatgttatagtgttaacttcac 43648409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 17054121 - 17054299
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| ||||||||||| | |||||| |||||||||| |||||||   |||||  || | || |||||| |||||||||||||| ||  ||    
T  17054121 aaggtaggataaaattagattaagtgtggtcttgttaatctgatgaattgatgatattatgaataccgnacttttgatgtcattgtacaaacaatgagat 17054220  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| | |||||| ||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  17054221 gttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcc 17054299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 37905887 - 37905709
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||||||| ||||      
T  37905887 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtgggg 37905788  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||||||| || ||||||||||||||||||||| | |||| ||||| | || ||||||||||||||||||||    
T  37905787 tgttactcgttacattttttatgttatagtgttaacttcacca-aaaaatcatttttataacttcaccatagaattttcc 37905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 17071762 - 17071940
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||||||  || |||| |||||| |||||||||||| | ||  ||    
T  17071762 aaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaataccgaacttttgatgtcattgtacaaataatgagat 17071861  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| | |||||| ||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  17071862 gttacttactacatttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcc 17071940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 11366435 - 11366584
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| || ||||||| |||||||  |||||| | |||||| |||||| ||||| |||||| ||||  ||||||||||||||||| |||||||||||||    
T  11366435 tcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagt 11366534  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| ||||| | |||||||||||| |||| ||||||||||||||||||    
T  11366535 gttaatttcaccaaaaaagtcattcttatgatttcaccatagaattttcc 11366584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 4264101 - 4264280
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||| | ||| |||||| ||||| |  |||||  |||||||| |||||| ||| |||||||||||||| |    
T  4264101 caaggtaggataaaattagattaagtgtattcttcttaatatgatgaattgataatactatggagactgaacttttgatgtcactgtacaaacagtggga 4264200  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||| |||||||||||||| || |||||||||||| | |||||||||||||||||||||||    
T  4264201 tgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgacttcaccatagaattttcc 4264280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 36642154 - 36641988
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||  |||||| |||||||| |||||| ||| |||||||||||||   ||||||||       
T  36642154 aaaattagattaagtgtattcttgttaatttgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgca 36642055  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36642054 acacttttgatgctatagtattaatttcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 3177118 - 3176941
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||| | | |||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||| |      
T  3177118 caaggtaagataaaattagattaagtgtattcttcttagtctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgcg 3177019  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||  ||||| ||||| ||||||| |||||||||  |||||||||||| || | ||||||||||||||||||    
T  3177018 tgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 33660392 - 33660569
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   || ||| ||||| |||| |||||||  ||| || |||||||| ||||||  || |||||||||||| |      
T  33660392 caaggtaggataaaattagattaagtgtattcctgttaatctaatgaattgatgatactaagaggactgaacttttgatgccactgtacaaacagttggg 33660491  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||  ||| | ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  33660492 tgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 2325442 - 2325573
Alignment:
Q  59 ttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaa 158  Q
    |||||||  |||||| |||||||| ||||||  || |||||||||| |||  ||||||||| ||||||  |||||||||| |||||||||||| ||||||    
T  2325442 ttgatgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaa 2325541  T
Q  159 gtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| ||| ||||||||||||||||||||    
T  2325542 gtcattcacataacttcaccatagaattttcc 2325573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 19424652 - 19424831
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||| |   |||||| |||||||||| |||||||  |||||| |||| ||| ||||||  || | || ||||| |||      
T  19424652 caaggtaagataaaattagattaagcgtattcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactatataaacaatgggg 19424751  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  19424752 tgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagccattctcatgacttcaccataaaattttcc 19424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 29242162 - 29242341
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   | |||| |||||||||| |||||||  |||||| |||||||| ||||||  || ||||||||||||||      
T  29242162 caaggtaggataaaattagattaagtgtagttttgttaatctgatgaattgatgatactatgaagactgaacttttgataccactgtacaaacagtgggg 29242261  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| || || ||| || |||||||||| |||||||||| | ||||  |||| |||||||||||||||||||||||||    
T  29242262 tgttacgcactatattttttatgttatagttttaacttcaccaaaaaaaccattttcatgacttcaccatagaattttcc 29242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 13711613 - 13711465
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  | |||  |||| ||| |||||| ||| ||||||||| ||||  |||||||||  ||| | |||||| |||| |    
T  13711613 tcttgttaatctgatgaattgatgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataat 13711514  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  13711513 gttaacttcaccagaaaagtcattctgatgacttcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 19289358 - 19289521
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||| | ||||||||||||||||||  || |||  ||| ||| |||||| |||||||||||||| |||  |||||||||||    
T  19289358 aaaattagattaagtgtagtcttattaatctgatgagttgatgatactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgttactcatt 19289457  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | ||| |||||||||||||||||||||||  | |||||||||     ||||||||||||||||||||||    
T  19289458 atatttttgatgttatagtgttaacttcatcaaaaaagtcat-----tgacttcaccatagaattttcc 19289521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 4167101 - 4166922
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| | |||||||| ||| |||  |||||  |||||||| ||||||  |||||||||||||||||      
T  4167101 caaggtaggataaaattagattaaatgtattcttgttagtctgatgaattgttgatactatggggactgaacttttgatgccattgtacaaacagtgggg 4167002  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  | ||| |||||  |||| |||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  4167001 tgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4166922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 33902215 - 33902068
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||||||||||  ||||||  || ||| |||||||| |||||| ||||| ||||||||||||  | ||||||| |||||| || ||||||  ||    
T  33902215 tcttgttaatctgatgaactgatgatactttgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgtta--gt 33902118  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  33902117 gttaacttcaccagaaaagtcattctaacgacttcatcatagaattttcc 33902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 4478537 - 4478368
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||| ||| ||||||  || |||||||||| |||| |||||||||      
T  4478537 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcaca 4478438  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctc-atgacttcaccatagaattttcc 190  Q
    ||| | |||||||||||||||||||||||| | |||  ||||| || |||||||||| ||||||||||||    
T  4478437 acacttttgatgttatagtgttaacttcaccaaaaatatcattttctatgacttcactatagaattttcc 4478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 41465571 - 41465509
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41465571 ttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 41465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 19314000 - 19313852
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||| | |||||||| |||||| ||| |||| ||| |||    |||||||||  ||| | |||||| |||| |    
T  19314000 tcttgttaatctgatgaattgatgatactat-aggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataat 19313902  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  19313901 gttaacttcaccagaaaagtcattctaatgacttcaccatagaattttcc 19313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 35959022 - 35958909
Alignment:
Q  77 ctgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttca 176  Q
    |||||| ||| || ||||||||||||||||||  |||| ||||||||||| || |||||||||||  |||||||| | |||||||||| | |||||||||    
T  35959022 ctgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttca 35958923  T
Q  177 ccatagaattttcc 190  Q
     |||||||||||||    
T  35958922 tcatagaattttcc 35958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 31570769 - 31570937
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| || ||||  |||||  |||||||| |||||| ||| | || ||| |||||  ||||||| |      
T  31570769 aaaattagattaagtgtattcttgttaatctgatgaattcatgatactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttaca 31570868  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | || ||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||    
T  31570869 acacttttaatgttatagtgttaatttcaccagaaaagttattctcataacttcaccatagaattttcc 31570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 41463904 - 41464051
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||| |||||| |||||||  |||||| || ||||| ||||||  || |||||||||||||   |||||||||  ||| | ||||| |||||||    
T  41463904 tcttgttaatatgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagt 41464003  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
     |||||||||| | ||| |||||||||| |||||||||||||||||||    
T  41464004 attaacttcaccaaaaatgtcattctcacgacttcaccatagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 43770893 - 43771039
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||   || |  |||||||| ||||||  || |||| |||||||||  |||||||||  ||| | |||||||||||||    
T  43770893 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagt 43770992  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||| | |||| ||||||| |||||||||||||||||||||    
T  43770993 gttaacttcacca-aaaaatcattctaatgacttcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 4763799 - 4763628
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   | |||| |||||||||| ||||| |  |||||   ||||||| |||||| ||| ||||||||||||||  ||||||||| |    
T  4763799 aaaattagattaagtgtagttttgttaatctgatgaattgattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcact 4763700  T
Q  122 acattgttgatgttatagtgtt---aacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | ||| || |||||||||   |||||||  |||||||||||| ||||||||||| |||||||||||||    
T  4763699 acagttttgttgatatagtgttgttaacttcatcagaaaagtcattttcatgacttcatcatagaattttcc 4763628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 18494392 - 18494471
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  18494392 tgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcc 18494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 27349974 - 27350142
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  ||| |  |||||||| |||||| ||| |||||||||||||   |||||||||      
T  27349974 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactaagg-gactgaacttttgatgtcactgtacaaacagtgtggtgttactcaca 27350072  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaa-gtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||| ||||||||||||||||| | ||||  | ||| | |||||||||||||| ||||||||    
T  27350073 acatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgacttcaccataaaattttcc 27350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 32308763 - 32308863
Alignment:
Q  217 aaacatatttgacatctt--agtggtaattccataacccatcaatttattattttgattttgattgatcaagttcataagtgaaaaattgcggttttgaa 314  Q
    |||||||||||||| ||   ||| ||||||||||||||||||||||||||      |||||||| |||| ||||||||| ||||||||||||| ||||||    
T  32308763 aaacatatttgacaactcgcagtagtaattccataacccatcaatttatt------attttgatagatcgagttcataaatgaaaaattgcgggtttgaa 32308856  T
Q  315 ttttaat 321  Q
    |||||||    
T  32308857 ttttaat 32308863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 39167387 - 39167566
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||| | |||| |||| ||||||   |||||| | ||| |||| |||||||  |||||| |||||||| |||||| |||||||||||||||||       
T  39167387 caaggtataataaaattagaataagtgtattcttgttactctaatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgagg 39167486  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  | | | |||||  |||  |||||||||||  | |||| |||||||| ||||||||||||| ||||||||    
T  39167487 tgttactcacaatacttttgatactattctgttaacttcatcaaaaaaatcattctcgtgacttcaccataaaattttcc 39167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 33709256 - 33709396
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||| |   |||||| |||||||  | |||||||  |||||  |||||||| |||||| ||| ||||| |||||||||     
T  33709256 caaggtaggataaaattagattaagcgtattcttgttaatctgaatatttgatgatactatggggactgaacttttgatgtcactgtactaacagtggag 33709355  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcac 151  Q
    ||||||||   ||| | ||||||||||||||||||||||||    
T  33709356 tgttactcgcaacacttttgatgttatagtgttaacttcac 33709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 41960945 - 41960883
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||  | ||||||||||   |||||||||||||||||||||||    
T  41960945 ttgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcc 41960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 39788580 - 39788625
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttcc 39788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 44913838 - 44913662
Alignment:
Q  15 gtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatg-actgaacgtttgatttcattgtacaaaca-gtggaatg 112  Q
    |||||| |||| |||||||||||   |||||| | |||||||| |||||||  |||||  | | ||||| ||| || ||||| |||||||| |||   ||    
T  44913838 gtatgataaaattagattaagtgtattcttgttagtctgatgaattgatgatactatgggggattgaactttttatgtcattttacaaacaagtgaggtg 44913739  T
Q  113 ttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||  ||||| |||||  || |||||||||||||| | |||||||||| || ||||||||||||||||||||||    
T  44913738 ttactcacaacatttttgatactacagtgttaacttcac-ataaaagtcattttcgtgacttcaccatagaattttcc 44913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 6177823 - 6177775
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcc 6177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 19093461 - 19093413
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttcc 19093413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 31861943 - 31861895
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc 31861895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 43446475 - 43446510
Alignment:
Q  155 aaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||||||||||||||||||    
T  43446475 aaaagtcattctcatgacttcaccatagaattttcc 43446510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 41643920 - 41643874
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttt 41643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 45327899 - 45327821
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgat 89  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||||||||||||||| ||||||    
T  45327899 caaggtaggataaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgatgactgaacttttgat 45327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 5881688 - 5881534
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattaca---ttgtt--gatgtt 135  Q
    |||||| ||| |||||| |||||||  ||| |  |||| ||| |||||| ||| ||||||||||||||  |||||||||  |||   |||||  ||||||    
T  5881688 tcttgttaatatgatgaattgatgatactaaggggactcaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgttttgatgtt 5881589  T
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | | |||||||| |||||||||||| | |||||||||| ||| ||||||||    
T  5881588 ataatatcaacttcaccagaaaagtcattttaatgacttcacaataaaattttcc 5881534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 17245110 - 17245158
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || |||||||||||||||  |||||||||||||||||||||    
T  17245110 ttaactttaccagaaaagtcattctcgcgacttcaccatagaattttcc 17245158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 18947598 - 18947642
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatt 186  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||    
T  18947598 ttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 22963448 - 22963400
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 22998029 - 22998077
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 34441921 - 34441969
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || | |||||||||| |||||||||||||||||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttcc 34441969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 44286011 - 44285951
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||| ||||||||||||||||  |||||| |||||| |||||||||||| || ||||||    
T  44286011 ttgatgctatagtgttaacttcatcagaaaaatcattcgcatgacttcaccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 7007058 - 7007093
Alignment:
Q  155 aaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| |||||||||||||||||||||||||||||||    
T  7007058 aaaaatcattctcatgacttcaccatagaattttcc 7007093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 42005437 - 42005390
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||| | |||| ||||| ||||||||||||||||||||||||    
T  42005437 ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttc 42005390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 18514771 - 18514819
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  | ||||||||||||||||||||||| ||| ||||||||    
T  18514771 ttaacttcatcaaaaaagtcattctcatgacttcactataaaattttcc 18514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 32308884 - 32308920
Alignment:
Q  336 tgttagaatattacttgctcgttaagaagattaatct 372  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  32308884 tgttagaagattacttgcccgttaagaagattaatct 32308920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 25184292 - 25184113
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||| |||||   |||||| ||||||||||||||||||  |||||| || ||||| || ||| |||||||||||||||| ||     
T  25184292 caaggtaggataaaattagatcaagtgtagtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagag 25184193  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  25184192 tgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcc 25184113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 55477934 - 55478106
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaa----acagtggaatgttact 117  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| |||||||||||    |||||||| |||||||    
T  55477934 aaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttact 55478033  T
Q  118 cattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | ||||||| |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  55478034 cgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 55478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 19089483 - 19089664
Alignment:
Q  9 agcaaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    ||||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||| ||||||||||||    
T  19089483 agcaaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattatacaaacagtgg 19089582  T
Q  109 aatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
      |||||||||||||| | ||||| |||||||||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  19089583 ggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttattcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 28003018 - 28003197
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||| ||||| |||||||  ||||||||||||||| |||||| ||| |||||||||||||||     
T  28003018 caaggtaggataaaattagattaagtgcagtcttgttaatccgatgaattgatgatactatgatgactgaacttttgatgtcactgtacaaacagtggag 28003117  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |  |||| | |||| | |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  28003118 tactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 28003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 37663771 - 37663950
Alignment:
Q  9 agcaaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    ||||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||||||||||||    
T  37663771 agcaaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgg 37663870  T
Q  109 aatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
      |||||||||||||| | || ||||  ||||||||||||||  | |||||||||||| |||||||||||||||||||||||    
T  37663871 ggtgttactcattacagttttaatgt--tagtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaattttcc 37663950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 19440691 - 19440860
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||   ||||| |||||||| ||||||  |||||||||||| ||||| ||||| |||||    
T  19440691 aaaattagattaagtgtagtcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcatt 19440790  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgac-ttcaccatagaattttcc 190  Q
    ||||| ||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||||||||    
T  19440791 acatttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaattttcc 19440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 879580 - 879759
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||| |||   |||||| ||||||||||||||||||  |||||| || | ||| |||||| |||||||||||||| ||       
T  879580 caaggtaggataaaattagattatgtgtagtcttgttaatctgatgagttgatgatactatgaagattaaacttttgatgtcattgtacaaacaatgagg 879679  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||| | ||||||||||||||||| || ||||||||    
T  879680 tgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttcc 879759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 27396765 - 27396618
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||| |||  ||| |||||| |||||||||||||||| |  |||||||||| ||| | || ||| |||| |    
T  27396765 tcttgttaatctgatgaattgatgatactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataat 27396666  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27396665 gttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 29584269 - 29584409
Alignment:
Q  48 aatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||| |||||||  |||||| |||||||| ||||||  ||||||||||||||||   |||||||||  ||| | ||||||||||||||||||||    
T  29584269 aatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaact 29584366  T
Q  148 tcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  29584367 tcaccagaaaagtcattcccacgacttcaccatagaattttcc 29584409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 34361524 - 34361702
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||  || |||| || | ||||| |||||||   ||||| | |||||| ||| || ||||| ||||||||||||      
T  34361524 caaggtatgataaaattatattaagtgtaattttgttaaccggatgaattgatgatattatgagg-ctgaacttttaatgtcattctacaaacagtgggg 34361622  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| || ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  34361623 tgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 34361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 4598141 - 4597994
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||| |||||| |||||||||||| |  |||||||| ||||||  || ||||||||||||||  |||||||||  ||| | |||||||||||||    
T  4598141 tcttgttaatatgatgaattgatgagtctaaggggactgaacttttgatgccactgtacaaacagtggggtgttactcacaacact-ttgatgttatagt 4598043  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  4598042 gttaacttcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 25701089 - 25701268
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||| ||||   || ||| |||||||||| |||||||  |||||| |||||||| |||||| ||| |||||||||||| |      
T  25701089 caaggtaggataaaattagatttagtgtagtcctgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtaggg 25701188  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||| | ||||||||||| ||||||||| || | |||||||||| |||||||||||||||| ||||||||    
T  25701189 tgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcattatcatgacttcaccataaaattttcc 25701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 32912612 - 32912791
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||| | |||||||   |||||   |||||| |||||| ||||| |||||| | | |      
T  32912612 caaggtatgataaaattatattaagtgtagtcttgttaacctgataaattgatgatattatgagtgctgaacttttgatatcattctacaaatactaggg 32912711  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  32912712 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 32912791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 35021151 - 35021246
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||  ||||||||| |||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35021151 tgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 35021246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 34948140 - 34948306
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||   ||||| |||||||| ||||||  || | ||||||||||||  |||||||||      
T  34948140 aaaattagattaagtgtattcttgttaatatgatgaattgatgatattatgaggactgaacttttgatgccactttacaaacagtggggtgttactcaca 34948239  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  34948240 acacttttgatgttatagtgttaacttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 42199908 - 42199729
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| |||||||||| |||||||  |||||| | |||||| ||| || ||||| |||||| | |||      
T  42199908 caaggtatgataaaattatattaagtgtagtcttgttaatctgatgaattgatgatactatgagggctgaactttttatgtcattctacaaataatgggg 42199809  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | |||||||||||||| ||||||||||||| |||||||||| | |||| ||||||| |||| ||||||||||| ||||||    
T  42199808 tattactcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttcc 42199729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 49376117 - 49375966
Alignment:
Q  40 atcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatag 139  Q
    ||||||| |||||||||| |||||||  |||||| |||||||| ||||||  || ||||||| ||||||  |||||||||  ||| | |||||| ||||     
T  49376117 atcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataa 49376018  T
Q  140 tgttaacttcactag-aaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  49376017 tgttaacttcaccagaaaaagtcattctcatgacttcaccgtagaattttcc 49375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 55241137 - 55241315
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||| | | |||||| | |||||||  |||||  |||||||| ||||||  || ||||||||||||||      
T  55241137 caaggtatgataaaattagattaagtgtattcttctta-tctgataaattgatgatactatggggactgaacttttgatgccactgtacaaacagtgggg 55241235  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||   ||| | |||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55241236 tgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 55241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 36493724 - 36493897
Alignment:
Q  15 gtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgtt 114  Q
    |||||| |||| |||||||||||   |||||| ||| | |||| |||||||  |||||  |||||||| |||||| ||| |||||||||| |||  ||||    
T  36493724 gtatgataaaattagattaagtgtagtcttgttaatttaatgaattgatgatactatggggactgaacttttgatgtcactgtacaaacaatggggtgtt 36493823  T
Q  115 actcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||| || ||| |||||| |||||| |||||||||| | |||||| ||| |||||||||||||||||||||||    
T  36493824 actcactatatttttgatggtatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 6864214 - 6864038
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||| ||   |||||| |||||||| | |||||||  |||||| ||||| || ||||||   |||||||||| ||| | |    
T  6864214 caaggtatgataaaattaaattaaatgtagtcttgttaatctgataaattgatgatactatgaggactggacttttgatgctattgtacaaaaagttgga 6864115  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    ||||| |||||| ||| |||||||||||||| ||||||||| | |||||||||||||||||| |||||||| |||||    
T  6864114 tgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 7703632 - 7703517
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| |||  |||||||||||||  ||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7703632 gactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcattctcatgactt 7703533  T
Q  175 caccatagaattttcc 190  Q
     | |||||||||||||    
T  7703532 taacatagaattttcc 7703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 38012033 - 38011854
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||| | |||| || ||||||||   |||||| |||||||||| ||||| |   ||||  |||||||| ||||||  ||  |||||||||||||      
T  38012033 caaggtataataaaattaaattaagtgtagtcttgttaatctgatgaattgataatattatggggactgaacttttgatggcaccgtacaaacagtgggg 38011934  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || || ||| |||| | |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  38011933 tgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatttcaccatagaattttcc 38011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 39398033 - 39397918
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||| |||||||||| |||  |||||||||  ||| | || ||||||||||||||||||||| | |||||||||||| |||||||    
T  39398033 gactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgactt 39397934  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  39397933 caccatagaattttcc 39397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 4205221 - 4205116
Alignment:
Q  85 ttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaa 184  Q
    ||||| ||||||||||||||||||  ||||| |||  ||||| ||||| |||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaa 4205122  T
Q  185 ttttcc 190  Q
    ||||||    
T  4205121 ttttcc 4205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 4396418 - 4396326
Alignment:
Q  98 acaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| ||||  |||||||||||||||| || ||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||||    
T  4396418 acaaacggtggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttcc 4396326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 47253870 - 47253751
Alignment:
Q  68 ctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctc 167  Q
    |||||| |||||||| |||||| ||| |||| ||||| |||  |||||||||  ||| | |||||| ||||||||||||||||| | |||||||||||||    
T  47253870 ctatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattctc 47253772  T
Q  168 atgacttcaccatagaatttt 188  Q
    |||||||||||||||||||||    
T  47253771 atgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 23761240 - 23761089
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||| |||||| ||| | |||||||||||   |||||||||      
T  23761240 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcaca 23761141  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgact 173  Q
    ||| | ||||||||||||||||||||| || |||| ||||||||||||||||    
T  23761140 acacttttgatgttatagtgttaactttacaagaatagtcattctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 17167825 - 17167715
Alignment:
Q  78 tgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcac 177  Q
    ||||| |||||| ||||||||||||||||||  |||||||||  ||||| ||||| ||||| |||||||||||  |||||||||||| || | |||||||    
T  17167825 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17167726  T
Q  178 catagaatttt 188  Q
    |||||||||||    
T  17167725 catagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 17173402 - 17173292
Alignment:
Q  78 tgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcac 177  Q
    ||||| |||||| ||||||||||||||||||  |||||||||  ||||| ||||| ||||| |||||||||||  |||||||||||| || | |||||||    
T  17173402 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17173303  T
Q  178 catagaatttt 188  Q
    |||||||||||    
T  17173302 catagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 9139424 - 9139247
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||||||||||||||||  |||||  || ||||| ||| || ||| ||||||||| ||||      
T  9139424 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgagttgatgatactatggggattgaactttttatgtcactgtacaaacggtgggg 9139325  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| ||  || || ||| ||||  ||||||||||| | |||||||| | |||||||||||||||||||||||||    
T  9139324 tgttactcacta--ttttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttcc 9139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 50697420 - 50697242
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| || ||||||||   |||||| |||||||||| |||||||  ||| ||  | ||||| |||||| ||||||||||||| || |      
T  50697420 caaggtaggataaaattatattaagtgtagtcttgttaatctgatgaattgatgatacta-gagaattgaacttttgatgtcattgtacaaacggtaggg 50697322  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||| ||| || ||||||||||||| ||||||||| |||| ||||| | ||||||||||| |||||||||||    
T  50697321 tgttactcgttatattttttatgttatagtgtttacttcactaaaaaaatcatttttatgacttcaccgtagaattttcc 50697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 17272073 - 17272011
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  17272073 ttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcc 17272011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 37287855 - 37287733
Alignment:
Q  69 tatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaa-gtcattctc 167  Q
    ||||| || ||||| ||||||  || ||||||||||||||  |||||||||  ||| | ||||||||||||||||||||| || | |||| |||||||||    
T  37287855 tatgaggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctc 37287756  T
Q  168 atgacttcaccatagaattttcc 190  Q
    || ||||||||||||||||||||    
T  37287755 attacttcaccatagaattttcc 37287733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 3042728 - 3042611
Alignment:
Q  73 atgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgac 172  Q
    |||||||||  |||||| |||||||| |||| ||||  | |||||||||||||| |  ||||||||||||||||||||| | |||| ||||| | ||||     
T  3042728 atgactgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgat 3042629  T
Q  173 ttcaccatagaattttcc 190  Q
    ||||||||||||||||||    
T  3042628 ttcaccatagaattttcc 3042611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 30002720 - 30002835
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||| |||||||||||||   |||||||||  ||| | |||||| || |||||||||||||| |||||| ||||| | |||||||    
T  30002720 gactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgactt 30002819  T
Q  175 caccatagaattttcc 190  Q
    ||||||||| ||||||    
T  30002820 caccatagagttttcc 30002835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 35025684 - 35025799
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| |||  ||| |||||||||  || |||||| |||| | |||||| ||||||||| ||||||| |||||| ||||| |||||||||    
T  35025684 gactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattttcatgactt 35025783  T
Q  175 caccatagaattttcc 190  Q
    || |||||||||||||    
T  35025784 cagcatagaattttcc 35025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 5047997 - 5048174
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| ||||| |||| |||||||  |||||   ||||||| |||||| |||| ||||||||||||       
T  5047997 caaggtaggataaaattagattaaatgcagtcttgttaatctcatgaattgatgatactatgggaactgaacttttgatatcatcgtacaaacagtgtgg 5048096  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |  |||||| |||| | |||||||||||| ||| ||||||| |||||| |||||||||| ||||||  ||||||||||    
T  5048097 tcctactcactacacttttgatgttatagagttgacttcaccagaaaaatcattctcataacttcattatagaatttt 5048174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 20097485 - 20097537
Alignment:
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 38812260 - 38812308
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 38812308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 52516655 - 52516599
Alignment:
Q  132 tgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 7152238 - 7152317
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| || | | ||||||||||| ||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  7152238 tgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcc 7152317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 53124366 - 53124287
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| ||| |||||||||||||||||||||||| | |||| ||||| | ||||||||| |||| ||||||||    
T  53124366 tgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataattttcc 53124287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 54499300 - 54499425
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcatt-gtacaaacagtggaatgttactcattacattgttgatgttatag 139  Q
    |||||| ||| |||||| |||||||  ||||   |||||||| |||||| ||||| |||||||| ||||  |||||||||  ||| | |||||| |||||    
T  54499300 tcttgttaatatgatgaattgatgatactatagagactgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatag 54499399  T
Q  140 tgttaacttcactagaaaagtcattc 165  Q
    |||||||||||| |||||||||||||    
T  54499400 tgttaacttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 33341457 - 33341397
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||| ||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||    
T  33341457 ttgatgatatagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 38811861 - 38811813
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 38811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 50764879 - 50764746
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||||| |||| |||||||  |||||| || ||||| |||||| |||  |||||||||||||  |||||||||  ||| | |||||||  ||||    
T  50764879 tcttgttaatctaatgaattgatgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgt--tagt 50764782  T
Q  141 gttaacttcactagaaaagtcattctcatgacttca 176  Q
    ||||||||||  | |||||| |||||||||||||||    
T  50764781 gttaacttcatcaaaaaagttattctcatgacttca 50764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 2266856 - 2266902
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  2266856 ttaacttcactagaaaagtcattatcatgacttcaccatataatttt 2266902  T

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Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 32579506 - 32579444
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| |||| ||||||| ||||||||||||||||  ||||||||||| ||||||||    
T  32579506 ttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaattttcc 32579444  T

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Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 32592242 - 32592096
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  ||| |  |||||||| |||||| ||| | ||||||||||||| ||||||||   ||| | |||||  | ||||    
T  32592242 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagt 32592143  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    ||||||||||  | |||||||||| | |||||||||| ||| |||||    
T  32592142 gttaacttcatcaaaaaagtcattataatgacttcacaataaaattt 32592096  T

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Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 37775764 - 37775670
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||||||||||  |||||||||  ||||| || || |||||||| ||||||||| | |||| ||||| | ||||||||||| ||||||||||    
T  37775764 tgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 51204633 - 51204580
Alignment:
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||| ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

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Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 2704560 - 2704512
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcc 2704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 17612383 - 17612338
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||    
T  17612383 ttaacttcattaaaaaaatcattctcatgacttcaccatagaattt 17612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 47073656 - 47073705
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||||||||| ||||||||| |||||||||||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccatagaattttcc 47073705  T

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Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 53337565 - 53337624
Alignment:
Q  131 atgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||||||||| |  |||||| ||||| ||||||||| |||||||||||||||    
T  53337565 atgttttagtgttaactttatcagaaaaatcattatcatgactttaccatagaattttcc 53337624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 46884175 - 46884245
Alignment:
Q  120 ttacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || ||||||  ||||||||||| | | |||||||||| | |||||||||| ||||||||||||    
T  46884175 ttacattttttatgttacggtgttaacttcgccaaaaaagtcatttttatgacttcactatagaattttcc 46884245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 28293236 - 28293285
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||   |||||||||||||||||||||| | |||||||||||    
T  28293236 gttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattttcc 28293285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 46888273 - 46888354
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttca 176  Q
    |||||||| |||||  | ||||||| |||| | ||||||||||||| |||||||||  |||||||| ||| || ||||||||    
T  46888273 tgtacaaatagtggggtattactcactacaattttgatgttatagtattaacttcatcagaaaagttattttcttgacttca 46888354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 49878683 - 49878636
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||||||||| |||| ||||||||||||||||||||    
T  49878683 ttaacttcaccaaaaaagtcattatcat-acttcaccatagaattttcc 49878636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 54995799 - 54995847
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||||||||| ||||||||||| | |||||||||||    
T  54995799 ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaattttcc 54995847  T

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Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 2959923 - 2959744
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||||| | |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||| |||||||||||||| |    
T  2959923 caaggtaggataaaattagattaagtgtggtcttgttaatctgatgaattgatgacactatgaggactgaacttttgatgtcactgtacaaacagtggga 2959824  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | |||| | |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  2959823 tgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcc 2959744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 32267209 - 32267030
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  ||||||| ||||||||| ||||||||   ||||| || ||||| |||||| ||||||||||||||||||      
T  32267209 caaggtaggataaaattagattaagtgtaatcttgttaatctgatgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtgggg 32267110  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| ||||||||||| |||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  32267109 tgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttcc 32267030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 15383108 - 15382929
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||| ||||||||||| ||||||  |||||||||||| |||| |    
T  15383108 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactacgatgactgaacttttgatgacattgtacaaacggtggga 15383009  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||| ||||| | |||||||||| | || ||||||||||||||||||||    
T  15383008 tgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataacttcaccatagaattttcc 15382929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 18422826 - 18422647
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  ||||||| |||||||||| |||||||   ||||| |||||||| |||||| ||||||||||||| ||||      
T  18422826 caaggtaggataaaattagattaagtgtaatcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtgggg 18422727  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||| ||| |||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||    
T  18422726 tgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 18422647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 10922902 - 10922724
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| ||||  ||||||||||   |||||| ||||||||||||||||||  |||||| || ||||| |||||| ||||||||||||||||||      
T  10922902 caaggtatgataaaataagattaagtgtagtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtgggg 10922803  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    | |||||||||||||| || ||||||||||||||||||||| | |||| |||||||||||| ||||||||| |||||||    
T  10922802 tcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 15752204 - 15752027
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| ||||||  ||||||||||||||||       
T  15752204 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtgagg 15752105  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||| || ||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  15752104 tgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 34012389 - 34012557
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| |||||||   |||||||||||||| ||||||  || | ||||||||||||| ||||||||| |    
T  34012389 aaaattagattaagtgtaatcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcact 34012488  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| |||||||||||||||||||||||||  | ||| |||||| |||||||||||||||||||||||||    
T  34012489 acagtgttgatgttatagtgttaacttcatcataaacgtcattttcatgacttcaccatagaattttcc 34012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 51129034 - 51128884
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| ||| |||||| |||||||  |||| |||||||||| |||||| ||||||||||||| |||||     
T  51129034 caaggtatgataaaattatattaagtgtagtcttgttaatatgatgaattgatgatactataatgactgaacttttgatgtcattgtacaaacggtggag 51128935  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtc 161  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  51128934 tgttactcattacattttttatgttatagtgttaacttcactaaaaaagtc 51128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 28769827 - 28769651
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| ||| |||||| |||||||  |||||| ||| |||| ||||||  |||||||||||| ||||      
T  28769827 caaggtatgataaaattagattaagtgtagtcttgttaatatgatgaattgatgatactatgaggaccgaacctttgatgccattgtacaaacggtggg- 28769729  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||||||||| ||||||| |||||||||||||||| | |||||| ||| | |||||||||||||||||||||    
T  28769728 tgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgacttcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 3309311 - 3309144
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| || ||||| ||||||  || ||||||||||||||  |||||||||      
T  3309311 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaagattgaacttttgataccactgtacaaacagtggg-tgttactcaca 3309213  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  3309212 acacttttgatgttatagtgttaactttaccagaaaagtcattctcatgactttaccatagaattttcc 3309144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 10182009 - 10182188
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  ||||||| |||||||||| |||| ||  |||||| |||||||| ||||||  || ||||||||||||||      
T  10182009 caaggtaggataaaattagattaagtgtaatcttgttaatctgatgaattgacgatactatgaggactgaacttttgatgccactgtacaaacagtggcg 10182108  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| || || ||| || |||||| ||| |||||||||| | |||||||||| |||||||||||||||||||||||||    
T  10182109 tgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 10182188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 30254598 - 30254420
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||||    |||||| |||||||||| |||||||  || ||| |||||||| |||||| |||||||||||||||||       
T  30254598 caaggtaggataaaattagattaagtctagtcttgttaatctgatgaattgatgatactttgaggactgaacttttgatgtcattgtacaaacagtgtg- 30254500  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | |||||||||||||| ||||||||||| |||||||||||  | |||||||||||| || ||||||||||||||||||||    
T  30254499 tattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttataacttcaccatagaattttcc 30254420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 1547397 - 1547283
Alignment:
Q  76 actgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttc 175  Q
    ||||||| ||||||  || || |||||||||||| |||||||||  ||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  1547397 actgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttc 1547298  T
Q  176 accatagaattttcc 190  Q
    |||||||||||||||    
T  1547297 accatagaattttcc 1547283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 180
Target Start/End: Original strand, 28564782 - 28564951
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||| |||| |||| |||||||||||   |||||| ||| |||||| |||||||  |||||| |||||||| |||||| ||||||||||||||||        
T  28564782 caaggcatgataaaattagattaagtgtagtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtaagg 28564881  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccat 180  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||| ||||||||||    
T  28564882 tgttactcattacatttttgatgttatagtgttaacttcatcaaaaaaatcattttcataacttcaccat 28564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 16415821 - 16415641
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtg-ga 109  Q
    ||||||| || |||| |||||||||||   |||||| ||||| |||| |||||||  |||||||| |||||| ||||||  || |||||||||| |  |     
T  16415821 caaggtaggataaaattagattaagtgtagtcttgttaatctaatgaattgatgatactatgatggctgaacttttgatgccactgtacaaacatttagg 16415722  T
Q  110 atgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     ||||||||| |||| | |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16415721 gtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaattttcc 16415641  T

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Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 30326985 - 30327132
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| |||||||||| |||||||  ||||||||||||||| ||||||   ||||||||||| || |  | |||||||||||||| |||||||||||||||    
T  30326985 ttgttaatctgatgaattgatgatactatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgt 30327084  T
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| ||||| | |||||||||| | |||||||||| ||||||||||||    
T  30327085 taaattcacaaaaaaagtcatttttatgacttcactatagaattttcc 30327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 37618893 - 37619076
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagt--ctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    ||||||| || |||| |||||||||||   | |||| |||||||||| |||||||    ||||||  ||||||| |||||| ||||| ||||||||||||    
T  37618893 caaggtaggataaaattagattaagtgtagtattgttaatctgatgaattgatgatatactatgagaactgaacttttgatgtcattttacaaacagtgg 37618992  T
Q  109 aatgtt--actcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
      ||||  |||||||| ||| |||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||    
T  37618993 ggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtcattcttataacttcaccatagaattttcc 37619076  T

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Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 38823378 - 38823210
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||  || ||||| ||||||  || |||||||| |||||  ||||||||       
T  38823378 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggggattgaacttttgatgacactgtacaaatagtggggtgttactcgca 38823279  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  38823278 acaattttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcaccatagaattttcc 38823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 48620801 - 48620633
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  ||| |  |||||||| |||||| ||| ||||||||||||||  |||||||||      
T  48620801 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactgtacaaacagtggggtgttactcaca 48620702  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | ||||||||||| |||||||||||| |||||||||||| | || |||||| |||||||||||||    
T  48620701 acacttttgatgttatattgttaacttcacaagaaaagtcattttaataacttcaacatagaattttcc 48620633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 19899774 - 19899949
Alignment:
Q  15 gtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgtt 114  Q
    |||||| |||| || ||||||||   |||||| || ||||||| |||||||  |||||| |  ||||| ||||||  |||| |||||||||||   ||||    
T  19899774 gtatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgatactatgagggttgaacttttgatgccattctacaaacagtgaggtgtt 19899873  T
Q  115 actcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| ||||||| |||||||||||||||||||||||| | |||| ||||| | |||||||||||||||||||||||    
T  19899874 actcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcaccatagaattttcc 19899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 31621554 - 31621733
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||  ||||||  ||  ||||||| || ||      
T  31621554 caaggtaggataaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatggggactgaatttttgatgccaccgtacaaatagcgggg 31621653  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || |||||| ||||   |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  31621654 tgctactcaatacacctttgatgttatagtgttgacttcactagaaaagtcattctcatgacttcaccgtagaattttcc 31621733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 14758216 - 14758038
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||| |||| |||||||  |||||  |||||||| ||||||  ||  ||||||||||| |      
T  14758216 caaggtaggataaaattagattaagtgcagtcttgttaatctaatgaattgatgaaactatggggactgaacttttgatgccaccgtacaaacagttgtg 14758117  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    || |||||| |||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||    
T  14758116 tgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 23999522 - 23999343
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| ||||| |  |||||| | |||||| |||||| ||||| |||||| |||||      
T  23999522 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtgggg 23999423  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||| ||| || ||||| ||||||||||||||| | |||| ||||||| |||||||||||||| ||||||||    
T  23999422 tgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttcc 23999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 42721214 - 42721035
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  || ||||| |||||| | | ||||||||||||||      
T  42721214 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatggggattgaacttttgatgttactgtacaaacagtgggg 42721115  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| || ||| || ||| ||||| | ||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  42721114 tgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 42721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 41926327 - 41926161
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| |||||||  ||||   |||||||| | ||||  || |||||||||||||| || ||||||| |    
T  41926327 aaaattagattaagtgtaatcttgttaatctgatgaattgatgatactatagggactgaacttgtgatgccactgtacaaacagtgggatattactcact 41926228  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    | ||| ||||||||||||| |||||||||  | |||| ||||| |||| ||||||||||||||||||    
T  41926227 atatttttgatgttatagtattaacttcatcaaaaaaatcattttcataacttcaccatagaatttt 41926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 8222303 - 8222127
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || ||||  ||||||||||   |||||| ||| |||||| |||||||  ||||||  ||||||| ||||||  |||||||   || |||       
T  8222303 caaggtaggataaaatgagattaagtgtagtcttgttaatatgatgaattgatgatactatgagaactgaacttttgatgccattgta---acggtgtgg 8222207  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| | ||||||||||| |||||||||||    
T  8222206 tgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcatttttatgacttcaccgtagaattttcc 8222127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 47279364 - 47279196
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| || |||  || ||||||||||||||      
T  47279364 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaggactgaactttcgatgccactgtacaaacagtgggg 47279265  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcacca 179  Q
    |||||||||  ||| | |||||  |||| |||||||||||| | |||| ||||||||||||||||||||    
T  47279264 tgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcattctcatgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 11742352 - 11742530
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||| ||||| |||||||   ||||  |||||||| |||||| ||| ||||||||||||||      
T  11742352 caaggtaagataaaattagattaagtgtattcttgttaatccgatgaattgatgatattatgg-gactgaacttttgatgtcactgtacaaacagtgggg 11742450  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| |  ||| | |||||  ||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||    
T  11742451 tgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataacttcacgataaaattttcc 11742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 30254952 - 30254854
Alignment:
Q  91 tcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||  |||||  ||||||||| |||||||||||||||||||||||  | |||||||||| | |||||||||||||||||||||||    
T  30254952 tcattgtacaaacagtggg-tgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcc 30254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 37451449 - 37451292
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||| | |||||||  ||| || |||||||| |||||| ||||||||||||| || |  ||||||| |||    
T  37451449 aaaattagattaagtgtagtcttgttaatatgataaattgatgatacta-gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttatt 37451351  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccat 180  Q
    ||||| ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  37451350 acatttttgatgttatagtgttaactttaccaaaaaagtcatttttatgacttcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 7079064 - 7079254
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaac------- 103  Q
    ||||||| || |||| |||||||||||   |||||| ||| |||||| |||||||  ||||||||||||||| |||||| |||||||||||||           
T  7079064 caaggtaggataaaattagattaagtgtattcttgttaatttgatgaattgatgatactatgatgactgaacttttgatgtcattgtacaaacagtgagg 7079163  T
Q  104 ----agtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
        |||||  |||||||||  ||| | ||||| |||||||||||||||||| | |||||||||| ||||||||| |||||| ||||||||    
T  7079164 tgttagtggggtgttactcacaacacttttgatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 7079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 238525 - 238690
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| | |||||| | ||| |||  |||||  |||||||| |||||| ||||||||||||||||||| |||||||||      
T  238525 aaaattagattaagtgtattcttgttagtctgattaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtgga-tgttactcaca 238623  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||| || ||  ||||||||||||||||| | |||||| ||| || ||||||||| ||||||||||    
T  238624 acatttttaatactatagtgttaacttcaccaaaaaagttattttcgtgacttcactatagaatttt 238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 22170812 - 22170750
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  22170812 ttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcc 22170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 46931586 - 46931406
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| |||||||   ||||| | |||||  ||||||  | || ||||||||||||      
T  46931586 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgatattatgagggctgaatttttgatgccgttctacaaacagtgggg 46931487  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcac---tagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    | |||||||||||||| ||||||||||||||||||||||||    | |||| ||||||| || ||||||||||||||||||    
T  46931486 tattactcattacatttttgatgttatagtgttaacttcacaaaaaaaaaattcattcttataacttcaccatagaatttt 46931406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 21289816 - 21289661
Alignment:
Q  42 cttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgat-------gt 134  Q
    ||||| |||||||||| |||||||  ||||   |||||||| ||||||  || ||||||||||||||  ||||||||| |||||| || ||       |     
T  21289816 cttgttaatctgatgaattgatgatactatagggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatga 21289717  T
Q  135 tatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  21289716 tatagtgttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 27227486 - 27227657
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||  ||||||| |||||||||| |||||||  |||||| |||||||| ||||||  || |||||||||||||       
T  27227486 caaggtaggataaaattagattaagtgtaatcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtgagg 27227585  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||      | |||||| || ||| ||  ||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  27227586 tg------agtacattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 27227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 39393528 - 39393379
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| || ||||  |||||  || | ||| ||||||  || |||||||||| || | | |||||||  ||| | |||||| ||||||    
T  39393528 tcttgttaatctgatgaatttatgatactatggggattaaacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagt 39393429  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  39393428 gttaacttcattagaaaagtcattctcataacttcaccgtagaattttcc 39393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 4330456 - 4330288
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagt-gga 109  Q
    ||||||| || |||| |||||||||||   |||||| |||||||| | |||||||  ||||||||||||||| ||||||  || |||||||||| | ||     
T  4330456 caaggtaggataaaattagattaagtgcagtcttgttaatctgataaattgatgatactatgatgactgaacttttgatcccactgtacaaacattgggg 4330357  T
Q  110 atgttactcattacattgttgatgttatagtg-ttaacttcactagaaaagtcattctcatgacttcac 177  Q
     ||||||||| |||| | |||||| ||||||| ||| |||||  ||||||||||||||||| |||||||    
T  4330356 gtgttactcactacacttttgatgctatagtgtttatcttcatcagaaaagtcattctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 27763314 - 27763480
Alignment:
Q  13 aggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatg 112  Q
    |||||||| |||| |||||||||||   |||||| || ||||| | |||||||  |||||| | ||| || |||||| ||||| |||||||  |||  ||    
T  27763314 aggtatgataaaattagattaagtgtagtcttgttaacctgataaattgatgatactatgagggctggacttttgatgtcattctacaaactatggg-tg 27763412  T
Q  113 ttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccata 181  Q
    |||||||||||||| |||||||||||||||||||||||| | |||| ||||||| || |||| ||||||    
T  27763413 ttactcattacatttttgatgttatagtgttaacttcac-aaaaaaatcattcttataactttaccata 27763480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 32216198 - 32216090
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| ||||| |||| |||||||  ||| || |||||||| |||||   |||||||||||||||||  ||||||||| |||||| |||||||||||||||    
T  32216198 ttgttaatctaatgaattgatgatactacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgt 32216099  T
Q  143 taacttcac 151  Q
    |||||||||    
T  32216098 taacttcac 32216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 43579290 - 43579242
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 43579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 3535043 - 3534928
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||| || |||||||||    |||||||||  ||| | ||||||||||||||||||||||||||||||| | ||||| |||||||    
T  3535043 gactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaattaattctaatgactt 3534944  T
Q  175 caccatagaattttcc 190  Q
    ||  ||||||||||||    
T  3534943 cataatagaattttcc 3534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 47682525 - 47682673
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa-tgttactcattacattgttgatgttatag 139  Q
    |||||| |||||||||| |||||||  |||||| || ||||| ||||||  || ||||||| |||||| | |||||||||  ||||| || ||| ||  |    
T  47682525 tcttgttaatctgatgaattgatgatactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta--g 47682622  T
Q  140 tgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| | |||||||| |||||||||||||||||| ||||||||    
T  47682623 tgttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttcc 47682673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 27563906 - 27564084
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| ||||| |   |||    ||||||| |||||| ||| | |||||||||||||     
T  27563906 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgataatattatcggaactgaacttttgatgtcactatacaaacagtggag 27564005  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcact-agaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||| || ||| || | |||||||||||||||||||| | |||| ||||| |||| |||||||| |||||||||    
T  27564006 tgttactcactatatttttaaagttatagtgttaacttcactaaaaaaaatcattttcataacttcaccgtagaatttt 27564084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 33725612 - 33725778
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||  |||||| |||||||| ||||||  ||    | ||| |||||  || |||||| |    
T  33725612 aaaattagattaagtgcagtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgccaccaaagaaatagtgggctgctactcaat 33725711  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||| ||||| ||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  33725712 acacttttgatgatatagcgttgacttcactagaaaagtcattctcttgactttaccatagaatttt 33725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 9903066 - 9903215
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||   ||||  || ||||| |||||| ||| ||||||||||| ||  ||||||||| |    
T  9903066 aaaattagattaagtgtagtcttgttaatttgatgaattgatgatagtatgtggattgaacttttgatgtcactgtacaaacagcggggtgttactcact 9903165  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatga 171  Q
    ||| | |||||||||||||||||||||||  | |||||||||| ||||||    
T  9903166 acagttttgatgttatagtgttaacttcatcaaaaaagtcattttcatga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 27267216 - 27267376
Alignment:
Q  27 tagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacatt 126  Q
    |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||| ||| ||  || ||||||||||||||  ||| ||||| ||||||    
T  27267216 tagattaagtgtagtcttgttaatctgatgaattgatgatactatggagactgaacttttaatgccactgtacaaacagtggggtgtcactcactacatt 27267315  T
Q  127 gttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     || ||| ||  ||||||||||||| | |||| ||||||||||||||||| |||| ||||||||    
T  27267316 ttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgacttca-catataattttcc 27267376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 27533011 - 27533155
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||  || ||||| ||||||  || |||||||| |||||  |||||| ||  | | | |||||| ||||||    
T  27533011 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagt 27533110  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaat 185  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||    
T  27533111 gttaacttcaccagaaaagtcattctcataactttatcatagaat 27533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 15168179 - 15168085
Alignment:
Q  96 gtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||  || |||||| |||| | |||||| ||||||||| ||||||| ||||||  ||||||||| ||||||| ||||||||||||    
T  15168179 gtacaaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttcc 15168085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 4150490 - 4150535
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttcc 4150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 42663785 - 42663830
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 42663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 40884977 - 40884841
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| |||| ||  ||||   |||||||| ||||||  ||  |||||||||||||  || |||||| |    
T  40884977 aaaactagattaagtgcaatcttgttaatctgatgaattgaagatactatagggactgaacttttgatgccaccgtacaaacagtggggtgctactcact 40884878  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaa 158  Q
    ||| | |||||||||| ||||| ||||||| ||||||    
T  40884877 acacttttgatgttatggtgttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 47279204 - 47279159
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagatttttcc 47279159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 13876919 - 13876967
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||||||||| |||| ||||||||||||||||||||    
T  13876919 ttaacttcaccataaaagtcattttcataacttcaccatagaattttcc 13876967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 26970310 - 26970261
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||||||||| ||||||||| |||||| ||||||||    
T  26970310 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 26970261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 16132523 - 16132475
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||||||| |||  ||||||||||||||||||||||    
T  16132523 ttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttcc 16132475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 18797481 - 18797304
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||||||||||||||||  |||||| || ||||| |||||| ||||||||||||||||||      
T  18797481 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtgggg 18797382  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| || ||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18797381 tgttactcattacattttttatgt--tagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 18797304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 30055683 - 30055501
Alignment:
Q  9 agcaaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    ||||||||| || |||| |||||||||||   |||||| |||||||||| || ||||  |||||| |||||||| |||||| ||||||||||||||||||    
T  30055683 agcaaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgtcattgtacaaacagtgg 30055584  T
Q  109 aatgttactcattacattgttgatgttatagtgttaacttca-ctagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
      |||||||||||||| | ||||| ||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||    
T  30055583 ggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaattttcc 30055501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 5657520 - 5657667
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| ||| |||||| |||||||  |||||| |||||||| ||||||  || ||||||||||||||  |||||||||  ||| | |||||||||||||||    
T  5657520 ttgttaatatgatgaattgatgatactatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgt 5657619  T
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5657620 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 5657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 7334948 - 7334769
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| || |||||||||||||||  ||||||  ||||||| |||||| ||||||||||||||||||      
T  7334948 caaggtaggataaaattagattaagtgtagtcttgttaagctgatgagttgatgatactatgagaactgaacttttgatgtcattgtacaaacagtgggg 7334849  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||  || ||||||||||||||||||||  | |||||||||||||| ||||||||| |||||||||||    
T  7334848 tgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcattctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 37109996 - 37109847
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||   ||| |||||||||| |||||| ||||||||||||| ||||  |||||||||||||||| || ||||||||||    
T  37109996 tcttgttaatctgatgaattgatgatattataatgactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagt 37109897  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||||||||| | |||||||||||||||||||||||    
T  37109896 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 37109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 27283898 - 27283719
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| ||||||||||    |||||| |||||||| | ||||| |  |||||| |||||||| |||||||||||||||||||| ||||      
T  27283898 caaggtaggataaaattagattaagtatagtcttgttaatctgataaattgataatactatgaggactgaacttttgatttcattgtacaaacggtgggg 27283799  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||| ||||| | || ||||||||||||||||||||    
T  27283798 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttataacttcaccatagaattttcc 27283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 24211895 - 24211717
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| |||||||  |||||| | |||||| ||||||  |||| || ||||||| |      
T  24211895 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgccattctataaacagtaggg 24211796  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  24211795 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 17842623 - 17842772
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||   ||| |||||||| | |||||| ||||||||||||| ||||  |||||||||||||||| || ||||||||||    
T  17842623 tcttgttaatctgatgaattgatgatattataatgactgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagt 17842722  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||||||||| | |||||||||||||||||||||||    
T  17842723 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 17842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 31579071 - 31579255
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgta-----caaacag 105  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||      ||||||    
T  31579071 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcattgtataaattaaacag 31579170  T
Q  106 tggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||  |||||||||||||||| |||||||||||||||||||||||| | |||| | ||||| |||||||||||||||||||||||    
T  31579171 tggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcc 31579255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 38258699 - 38258521
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| || ||||| |||||| ||||||||||||| |||       
T  38258699 caaggtaggataaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacggtgtgg 38258600  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||||||||| || ||||||||||||||||||||| | |||| ||||| | ||||||||||| ||||||||||    
T  38258599 tgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 32821090 - 32821239
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||||| |||| |||||||  ||| || |||||||| ||||||  |||||||||||||||||  ||||||||| |||||| ||||||||||| |    
T  32821090 tcttgttaatctaatgaattgatgatactacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatatt 32821189  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| | |||| ||||| |||||||||||||||||||||||||    
T  32821190 gttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 32821239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 22687393 - 22687228
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   | |||| |||||||||| |||||||  |||||  |||||||| ||||||  || || ||||||||||||     
T  22687393 caaggtaggataaaattagattaagtgtattattgttaatctgatgaattgatgatactatggggactgaacttttgataccactgcacaaacagtggag 22687294  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttca 176  Q
    |||||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  22687293 tgttactcacaacatttttgatgttatagtgttaacttcatcagaaaagtcattctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 12390648 - 12390816
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| ||||| |  |||||  |||  ||| |||||| ||| || ||||||||||| ||||||||||||    
T  12390648 aaaattagattaagtgtagtcttgttaatctgatgaattgataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttactcatt 12390747  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||||||||||||||||||||| | |||||||  ||| |||||||||||||||||||||||    
T  12390748 acacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattttcc 12390816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 21991790 - 21991611
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||||||| ||||||  || ||||||||||||||      
T  21991790 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggggactgaacttttgatgacactgtacaaacagtgggg 21991691  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||   ||| | |||||| ||||||||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  21991690 tgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcattctcatgacttcaccctagaattttcc 21991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 26524363 - 26524513
Alignment:
Q  40 atcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatag 139  Q
    ||||||| ||| |||| | |||||||  |||||| ||||| || ||||||  || || ||||||| |||| ||||| |||  ||||| ||||||||||||    
T  26524363 atcttgttaatatgataaattgatgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatag 26524462  T
Q  140 tgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  26524463 tgttaacatcaccagaaaagtcattctcatgacttcaccatagaattttcc 26524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 33688273 - 33688446
Alignment:
Q  15 gtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgtt 114  Q
    |||||| |||| |||||||||||   |||||| |||||||||| |||||||  ||||   |||||||| ||||||  || || ||||||||| | |||||    
T  33688273 gtatgataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatagagactgaacttttgatgccactggacaaacagtaggatgtt 33688372  T
Q  115 actcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||| ||| | ||||||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  33688373 actcataacacttttgatgttatagtgttaactt-accagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 27421450 - 27421563
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||  ||| | |||||||||||||||||||||||| | |||| ||||| ||| |||||    
T  27421450 gactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgactt 27421549  T
Q  175 caccatagaatttt 188  Q
    ||||||||||||||    
T  27421550 caccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 8861407 - 8861260
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| |||||||| | |||||||  |||||  |||| ||| ||||||  || ||||||||||||||  ||||| |||| ||| | |||||| ||||||||    
T  8861407 ttgttaatctgattaattgatgatactatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgt 8861308  T
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  8861307 taacttcgcgagaaaagtcattctcatgacttcaccatagaattttcc 8861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 31520731 - 31520909
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   |||||| ||| | |||| |||||||  |||||  |||||||| |||||| ||| |||||||||| ||||     
T  31520731 caaggtatgataaaattagattaagtgtagtcttgttaatttaatgaattgatgatactatgg-gactgaacttttgatgtcactgtacaaacaatggag 31520829  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| || ||| |||||| |||||| |||||||||| | |||||||||| ||||||||||| |||| ||||||||    
T  31520830 tgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgacttcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 189
Target Start/End: Original strand, 48928582 - 48928748
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| ||||| |  |||||  |||||||| ||||||  ||  ||||||| |||||  || |||||| |    
T  48928582 aaaattagattaagtgcaatcttgttaatctgatgaattgataatactatgg-gactgaacttttgatggcaccgtacaaatagtggggtgctactcact 48928680  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||    
T  48928681 acacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 23111333 - 23111167
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||||| |||| |||||||  ||| ||||  ||||| ||||||  ||||||||||| |||||  |||||||||      
T  23111333 aaaattagattaagtgtagtcttgttaatctaatgaattgatgatactacgatggttgaacttttgatgccattgtacaaatagtggtgtgttactcaca 23111234  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    | ||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||    
T  23111233 atatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 44413386 - 44413564
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||    ||||| ||| |||||| |||| ||  |||||  ||| |||| |||||||||| |||||||||| |||      
T  44413386 caaggtatgataaaattagattaagtgtagccttgttaatttgatgaattgaagatactatggagaccgaacttttgatttcagtgtacaaacattgggg 44413485  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcact-agaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||| || ||| ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||||||||||    
T  44413486 tgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttaccatagaatttt 44413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 4583043 - 4582894
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| | |||||||| ||| |||  |||||  |||||||| |||||| |||||||||||| |||||  |||||||||  ||||| |||||  ||||||    
T  4583043 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagt 4582944  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     |||||||||| |||||||||||| || ||||||||||||||||||||||    
T  4582943 attaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 10481759 - 10481578
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagt-gga 109  Q
    ||||||| || |||| ||||||||| |   |||||| |||||||||| |||||||  |||| | |||||||  |||||| |||||||||||||||| ||     
T  10481759 caaggtaagataaaattagattaagcgtagtcttgttaatctgatgaattgatgatactataaagactgaatttttgatgtcattgtacaaacagtgggg 10481660  T
Q  110 atgttactcattacattgttgatgttatagtgttaacttcact-agaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     |||||||||||| ||| || |||||||||||||||||||| | | ||||||||||||| | |||| |||||||||||||||    
T  10481659 gtgttactcattatattttttatgttatagtgttaacttcattaaaaaaagtcattctcctaactttaccatagaattttcc 10481578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 29173694 - 29173518
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| | | |||||| |||||||  |||||| |||||||| |||||| |||||||||||||||||||     
T  29173694 caaggtaggataaaattagattaagtgtattcttgttagtttgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggag 29173595  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||  ||| | |||||  || |||||||||||||| |||||||||||||   |||||||| |||||||||||    
T  29173594 tgttactcacaacacttttgatactacagtgttaacttcaccagaaaagtcattcatgtgacttca-catagaatttt 29173518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 15612766 - 15612944
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| || ||||||||   |||||| |||||||||| |||||||   |||   |||||||| ||||||  || | |||||||| |||      
T  15612766 caaggtaggataaaattaaattaagtgtattcttgttaatctgatgaattgatgatattatagggactgaacttttgatgccactctacaaacactgggg 15612865  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  15612866 tgttactcataacact-ttgatgttatagtgttaacttcacaagaaacgttattctcatgacttcaccatagaattttcc 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 37347128 - 37346997
Alignment:
Q  59 ttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaa 158  Q
    |||||||  |||||| |||||||| |||||| ||| |||||||||| |||  |||||||||||| ||| |||||| |||||| |||||||||| | ||||    
T  37347128 ttgatgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaa 37347029  T
Q  159 gtcattctcatgacttcaccatagaattttcc 190  Q
     ||||| |||||||||||||||| ||||||||    
T  37347028 atcattttcatgacttcaccataaaattttcc 37346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 41765096 - 41765264
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||| ||||| || ||||||  ||  |||||||||||||  || |||||| |    
T  41765096 aaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcact 41765195  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||| |||||| || |||| |  |||||||||||||||||||||||||||| |||||||||    
T  41765196 acacttttgatgctatagtattgactttatcagaaaagtcattctcatgacttcaccatggaattttcc 41765264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 6546673 - 6546494
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| |||||||||| |||||||  |||||   | | ||| |||||| | | |||||||| |||||      
T  6546673 caaggtaggataaaattagattaaatgtattcttgttaatctgatgaattgatgatactatggatagtaaacttttgatgttactgtacaaatagtgggg 6546574  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||   ||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  6546573 tgttactcgcaacacttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccatagaattttcc 6546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 43686130 - 43686016
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| ||||||  |||||||||||||||||  |||||||||  ||||| ||||| ||||||||||||||||||   |||||||||| || ||||||    
T  43686130 gactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgactt 43686032  T
Q  175 caccatagaattttcc 190  Q
    ||||||||||||||||    
T  43686031 caccatagaattttcc 43686016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 32432576 - 32432432
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| | |||||||| |||||||  |||||  |||||||| |||||| |||||||||||||| |||  |||||||||  ||||| |||     |||||    
T  32432576 tcttgttagtctgatgaattgatgatactatggagactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttg-----atagt 32432482  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| |||||| ||||| || ||||||||||||||||||||||    
T  32432481 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 32432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 25691669 - 25691729
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25691669 ttgatgttatagtgttaacttcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 48928315 - 48928466
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| ||||| |  |||||  |||||||| ||||||  ||  ||||||| |||||  || |||||| |    
T  48928315 aaaattagattaagtgcaatcttgttaatctgatgaattgataatactatgg-gactgaacttttgatggcaccgtacaaatagtggggtgctactcact 48928413  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    ||| | |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48928414 acacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 34362239 - 34362334
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||  |||||||||  ||| | |||||| ||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||    
T  34362239 tgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcattctcataatttcaccatagaattttcc 34362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 11071328 - 11071182
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| |||||||||| |||||||  ||||||  ||||||| |||||| ||| ||||||||||||||| ||||||||  || ||| |||||| ||||||      
T  11071328 ttgttaatctgatgaattgatgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtac 11071229  T
Q  143 taacttcactagaaaagt-cattctcatgacttcaccatagaatttt 188  Q
    |||||| || | |||| | |||| |||||||||||||||||||||||    
T  11071228 taactttaccaaaaaaatacattttcatgacttcaccatagaatttt 11071182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 10359221 - 10359400
Alignment:
Q  11 caaggtatgagaaaagtagatt-aagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgga 109  Q
    |||||||||| |||| |||||| |||||   ||||||  ||||||||| |||||||  |||| | |||||||| |||||| ||| |||| ||| ||| |     
T  10359221 caaggtatgataaaattagatttaagtgtagtcttgttgatctgatgaattgatgatactatca-gactgaacttttgatgtcactgtataaatagtagg 10359319  T
Q  110 atgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||| | |||||| ||||   |||| || || |||||||||||| |||||||||||||||||||||||||    
T  10359320 atgttactcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgacttcaccatagaattttcc 10359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 12165895 - 12165727
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  ||     |||| ||| ||||||  || ||||||||||||||  |||||||||      
T  12165895 aaaattagattaagtgtattcttgttaatctgatgaattgatgatacttaagggacttaacttttgatgccactgtacaaacagtggggtgttactcaca 12165796  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | | |||| ||||||||||||||||| |||||||||||| | | ||||||||| |||||||||||    
T  12165795 acactttggatgctatagtgttaacttcaccagaaaagtcattttaacgacttcaccgtagaattttcc 12165727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 9355849 - 9356012
Alignment:
Q  27 tagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacatt 126  Q
    |||||||||||   |||||| |||||||||| || | ||   |||||  ||| ||| |||||| ||| ||||||||||||||  | || |||| ||||||    
T  9355849 tagattaagtgtagtcttgttaatctgatgaattaacgataatatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacatt 9355948  T
Q  127 gttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     || ||| ||||||||||| ||||| | ||  ||||||||||||||||||||||| ||||||||    
T  9355949 ttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcaccataaaattttcc 9356012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 38053592 - 38053462
Alignment:
Q  59 ttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttca-ctagaaa 157  Q
    |||||||  ||||||  ||||||| |||||| |||||||||||||||| |  | |||||||||||||| || |||||||||| ||||||||| | | |||    
T  38053592 ttgatgacactatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcaccaaaaaa 38053493  T
Q  158 agtcattctcatgacttcaccatagaatttt 188  Q
    |  |||| ||||||| ||||||| |||||||    
T  38053492 aaacattatcatgacctcaccattgaatttt 38053462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 8299245 - 8299192
Alignment:
Q  135 tatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  8299245 tatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 23402371 - 23402419
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc 23402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 40381988 - 40381940
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcc 40381940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 241024 - 241069
Alignment:
Q  145 acttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | |||||||||| |||||||||||||||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 241069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 26980466 - 26980325
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||   ||||  |||||||| ||||||  || ||||||||| ||||  |||||||||      
T  26980466 aaaattagattaagtgtattcttgttaatttgatgaattgatgatattatggggactgaacttttgatgccactgtacaaaccgtggggtgttactcaca 26980367  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcat 163  Q
    ||| | |||||| |||| |||||||||||| | |||||||||    
T  26980366 acacttttgatgctataatgttaacttcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 22955312 - 22955352
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatag 182  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  22955312 ttaacttcaccagaaaagtcattctcattacttcaccatag 22955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 10675326 - 10675377
Alignment:
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||| ||||| ||||  |||||||||||| ||||||||||||||||||||||    
T  10675326 atagggttaatttcatcagaaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 40552297 - 40552444
Alignment:
Q  43 ttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgt 142  Q
    |||| |||||||||| |||||||   ||||| |||||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  40552297 ttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgt 40552396  T
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| | | ||||||||||||||||||||||||||||||||||||    
T  40552397 taacttctccaaaaaagtcattctcatgacttcaccatagaattttcc 40552444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 51212987 - 51213166
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| || ||||||||   |||||| ||||||||||||||||||  |||||| |||| ||| ||||||  |||||||||||||||||      
T  51212987 caaggtaggataaaattatattaagtgtagtcttgttaatctgatgagttgatgatactatgaggactcaacttttgatgccattgtacaaacagtgggg 51213086  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||| ||||||||||| || |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  51213087 tgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 51213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 48355111 - 48354932
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||| ||||||   |||||| ||||||||||||||||||  ||||||  ||||||| ||||||  ||||||||||||| |||      
T  48355111 caaggtaggataaaattagactaagtgtagtcttgttaatctgatgagttgatgatactatgagaactgaacttttgatgccattgtacaaacaatgggg 48355012  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| || || |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  48355011 tgttactcattacatttttaatattatagtgttaacttcaccataaaaatcattctcatgacttcaccatagaattttcc 48354932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 4761655 - 4761836
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||| |||||||||||||  |||||| |||||||| |||||| ||||||||||||||||| |     
T  4761655 caaggtaggataaaattagattaagtgtagtcttgttaatcagatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaag 4761754  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcac--tagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| ||||| ||||||| ||||||||||   | |||||||| |||||||| ||||||||||||||||||    
T  4761755 tgttactcattacatttttgatattatagtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaattttcc 4761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 3655208 - 3655387
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||||||| ||||      
T  3655208 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtgggg 3655307  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| || |||||||||||||||||| |  | |||||||||| | |||||||||||||| ||||||||    
T  3655308 tgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatttttatgacttcaccataaaattttcc 3655387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 35844485 - 35844317
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||| ||| |||||| ||| |||||||||||||   |||||||||      
T  35844485 aaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcaca 35844386  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35844385 acatttttgttgttatagtgttaacttcaccagaaaagtcattatcatgacttcaccatagaattttcc 35844317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 26941266 - 26941445
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| || ||||  | |||| |||||||| |||||| ||||| ||||||||||||      
T  26941266 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattaatgataccatgaggactgaacttttgatgtcattatacaaacagtgggg 26941365  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| | | ||||| |||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||    
T  26941366 tgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttcc 26941445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 52040928 - 52041108
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagt-gga 109  Q
    ||||||| || |||| |||||||||||  ||||||| |||||||||| |||||||  ||||||||||||||| ||||||  || | |||||||| | ||     
T  52040928 caaggtaggataaaattagattaagtgtaatcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgccactatacaaacatttggg 52041027  T
Q  110 atgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
      |||||||| |||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  52041028 gagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcattctcatgacttcacctcagaattttcc 52041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 20373302 - 20373481
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||| |||||| |||||||  | ||||  ||||||| |||||| ||||||||||||||||||      
T  20373302 caaggtaggataaaattagattaagtgtagtcttgttaatttgatgaattgatgataccatgagaactgaacttttgatgtcattgtacaaacagtgggg 20373401  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| ||||||| ||||||||||||| |||||||||| | |||| ||||||| |||||||||| ||| ||||||||    
T  20373402 tgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttcactataaaattttcc 20373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 37203236 - 37203058
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| ||||| |||| |||||||  |||||| |||||||| ||||||  || ||||||||||||||  |    
T  37203236 aaggtaggataaaattagattaagtgtagtcttgttaatcttatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtggggt 37203137  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| |||| | |||||||||||||||||||||||  | |||| ||||| | |||||||||||||||||||||||    
T  37203136 gttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaattttcc 37203058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 4015600 - 4015451
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||| |||||| |||||||  |||||| |||||||| |||||| ||| | |||||||||| |  |||||||||  ||| | |||||| ||||||    
T  4015600 tcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagt 4015501  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4015500 gttaacttcatcagaaaagtcattctcatgacttcaccatagaattttcc 4015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 46297832 - 46297945
Alignment:
Q  75 gactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    |||||||| |||||   |||||||||||||||||  ||||||||| || ||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  46297832 gactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgactt 46297931  T
Q  175 caccatagaatttt 188  Q
    ||||||||||||||    
T  46297932 caccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 7327489 - 7327668
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| || ||||||||   |||||| |||| ||||| |||||||  |||||  |||||||| |||||| ||| |||||||| | |||| |    
T  7327489 aaggtaggataaaaataaattaagtgtattcttgttaatccgatgaattgatgatactatggggactgaacttttgatgtcactgtacaaataatggagt 7327588  T
Q  112 gttactcattacattgttgatgttatagtgtt-aacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||  ||| | |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  7327589 gttactcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcattctcataacttcaccatagaattttcc 7327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 37157876 - 37157699
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| ||||| || | |||||||  ||||||||||||||| ||||||  || ||||||| ||||||  |    
T  37157876 aaggtaggataaaattagattaagtgtagtcttgttaatcttataaattgatgatactatgatgactgaacttttgatgccactgtacaa-cagtggggt 37157778  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||| |||| | |||||||||||||||||||||||  | ||||| |||| |||||||||||||||||||||||||    
T  37157777 gttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttcatgacttcaccatagaattttcc 37157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 11466994 - 11466815
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||  |||| ||| ||||||  || ||||||||||||||      
T  11466994 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactatggggactaaacttttgatgccactgtacaaacagtgggg 11466895  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| |   ||||||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||    
T  11466894 tgttactcacaacacttgcgatgttatagtcttaacttcatcagaaaagtcattctcaagacttcaccatagaattttcc 11466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 42506079 - 42506214
Alignment:
Q  9 agcaaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    ||||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||||||||||||    
T  42506079 agcaaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgg 42506178  T
Q  109 aatgttactcattacattgttgatgttatagtgtta 144  Q
      | |||||||||||| | |||||||||||||||||    
T  42506179 ggtattactcattacaattttgatgttatagtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 47481651 - 47481513
Alignment:
Q  52 tgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcac 151  Q
    |||||| |||||||  |||||| | || ||| |||||| ||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  47481651 tgatgaattgatgatactatgagggctaaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcac 47481552  T
Q  152 tagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
     | |||  ||||||  |||||||||||||| ||||||||    
T  47481551 caaaaacatcattcctatgacttcaccataaaattttcc 47481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 11357371 - 11357535
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa- 110  Q
    |||||| || |||| |||||||| ||   |||||| |||||||||| |||||||  ||||||||||||||| ||||||   | ||||||||||||||       
T  11357371 aaggtaggataaaattagattaaatgtagtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgcaactgtacaaacagtggggg 11357470  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttc 175  Q
    ||||||||| || | | |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11357471 tgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 29099495 - 29099356
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||| |||||| |||||||  ||| |  |||||||| || ||| ||| ||||||||||||||  |||||||||  ||||| || ||||||||||    
T  29099495 tcttgttaatatgatgaattgatgatactaaggggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagt 29099396  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccat 180  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  29099395 gttaacttcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 22451127 - 22450959
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||  |||||  |||||||| ||||||  ||   |||||||||||   || |||||| |    
T  22451127 aaaattagattaagtgcagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcact 22451028  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  22451027 acacttttgatgctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 22450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 21193776 - 21193597
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||| ||   |||||| |||||||||| || ||||  | |||  |||||||| |||||| ||| | ||||||||||||      
T  21193776 caaggtaggataaaattagattaaatgtattcttgttaatctgatgaattaatgataccatggggactgaacttttgatgtcactctacaaacagtgggg 21193677  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||   | |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  21193676 tgttactcacaacacttttgattcaacagtgttaacttcaccagaaaagtcattctcatgactttaccatagaattttcc 21193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 27480396 - 27480564
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||| |||||| |||||||  |||||  |||||||| |||||| |||  ||||||||| | | ||| ||||||||    
T  27480396 aaaattagattaagtgcagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgtcaccgtacaaacaattggatgctactcatt 27480495  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | | | |||||||||||||||| |||| || | |||  ||||||||||||||||| |||||||||||||    
T  27480496 atacttttgatgttatagtgttgactttaccaaaaatatcattctcatgacttcatcatagaattttcc 27480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 34133066 - 34132926
Alignment:
Q  50 tctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttc 149  Q
    |||||||| |||||||   ||||  |||||||| |||||| ||||||||||||||||||  |||||||||  ||||| |||||  ||||||||||| |||    
T  34133066 tctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttc 34132967  T
Q  150 actagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || | |||||||||| || ||||||||  ||||||||||||    
T  34132966 accaaaaaagtcattttcgtgacttcattatagaattttcc 34132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 43975905 - 43976068
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  || |||| |||||||||| |||||||   ||||| || | ||| |||||| |||| ||||||| |||||| || |||||| |    
T  43975905 aaaattagattaagtgcaattttgttaatctgatgaattgatgatattatgaggattaaacttttgatgtcatcgtacaaatagtggagtgctactcact 43976004  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||| ||||||||| |||||   | ||||||||||||||||||||||||||| ||||||    
T  43976005 acacttttgatgctatagtgttgacttc---aaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 44186507 - 44186686
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   | |||| ||| |||||| |||||||  |||||  |||||||| |||||| ||| |||| |||||| ||      
T  44186507 caaggtaggataaaattagattaagtgtatttttgttaatttgatgaattgatgatactatggggactgaacttttgatgtcactgtataaacagcgggg 44186606  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||| ||||||||||||||||| | |||| ||||||||  ||||||| |||||||||||||    
T  44186607 tgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgacttcatcatagaattttcc 44186686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 24488979 - 24489140
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| | |||||||| |||||||   ||||  |||||||| |||||| ||||||| |||||||||||||||||||||      
T  24488979 aaaattagattaagtgtattcttgttagtctgatgaattgatgataatatggggactgaacttttgatgtcattgtgcaaacagtggaatgttactcaca 24489078  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccataga 183  Q
    ||||| || ||  |||||| |||||||||| | |||| ||||| || |||||||||| ||||    
T  24489079 acatttttaatactatagtcttaacttcacaaaaaaaatcattttcgtgacttcaccgtaga 24489140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 21009808 - 21009990
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||| ||||| |||| || ||||||||   |||||| || ||||||| |||||||   ||||| | |||||| |||||| ||||| |||||| |||||      
T  21009808 caagttatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgataatatgagggctgaacttttgatgtcattctacaaatagtgggg 21009907  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcac---tagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| ||||||||||||||| || |||||    | |||| ||||||| || ||||||||||| ||||||||    
T  21009908 tgttactcattacatttttgatgttatagtgtcaaattcacaaaaaaaaaaatcattcttataacttcaccataaaattttcc 21009990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 40936131 - 40935995
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| | |||||  |||||| |||||||| |||||| ||| |||| ||||| ||   ||||||||   ||| | |||||| ||||||    
T  40936131 tcttgttaatctgatgaatagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagt 40936032  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcac 177  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  40936031 gttaacttcaccagaaaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 45174645 - 45174494
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt--acattgttgatgttata 138  Q
    |||||| |||||||||| |||||||  |||||  |||||||| ||||||   | ||||||||||||| | |||||||||    ||| | |||||||||||    
T  45174645 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcacacaacacttttgatgttata 45174546  T
Q  139 gtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||| | |||||| |||||||  ||||||||||| ||||||||    
T  45174545 gtgttaacttcaccaaaaaagttattctcacaacttcaccataaaattttcc 45174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 53176213 - 53176074
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||  ||||||| |||||||||| |||||||  |||||| |||||||| |||||| | |||||||||||||||||   ||||| |      
T  53176213 aaaattagattaagtgtaatcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgttattgtacaaacagtggaca-ttacttaca 53176115  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtca 162  Q
    ||||| ||||||||||  |||||||||||  ||||||||||    
T  53176114 acatttttgatgttatgatgttaacttcatcagaaaagtca 53176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 39282822 - 39282644
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| | |||||   |||||  ||||||| ||||||  || |||| |||||||||      
T  39282822 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaatggatgataatatgagaactgaacttttgatgccactgtataaacagtgggg 39282723  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    | |||||||  ||| | |||||||||||||||||| || |  |||||| ||||| |||||||||||||||||||||||||    
T  39282722 tattactcac-acagttttgatgttatagtgttaattttatcagaaaaatcattttcatgacttcaccatagaattttcc 39282644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 46994667 - 46994835
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| ||||  ||||||||||||  |||||| |||||||| |||||| ||||||||       ||       
T  46994667 caaggtaggataaaattagattaagtgtagtcttgttaatcatatgagttgatgatactatgaggactgaacttttgatgtcattgta-------tg--- 46994756  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| ||||||||||||| |||||||||| | |||| ||||||| | ||||||||| |||||||||||    
T  46994757 tgttactcattacatt-ttgatgttatagtattaacttcaccaaaaaaatcattcttacgacttcaccgtagaattttcc 46994835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 33698258 - 33698183
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||||| |||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||||    
T  33698258 tgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaattttcc 33698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 32373556 - 32373466
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||||||||||||||  ||||||||  ||| | |||||| |||||||||||||| | | ||||||||||||||||||||||| ||||||||||    
T  32373556 tgtacaaacagtgga--gttactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 40640634 - 40640682
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 40640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 44891585 - 44891498
Alignment:
Q  102 acagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| ||||||||||  ||| | |||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||||||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcc 44891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 54505878 - 54505799
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||||||||||   ||||||| |||| ||||||||    
T  54505878 tgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcattcttgcgacttcatcataaaattttcc 54505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 55343407 - 55343469
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||| |||||||||||||||||  |||||||||||| || ||||||||||||||||||||||    
T  55343407 ttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcc 55343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  136 atagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 53229159 - 53229336
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtg-gaa 110  Q
    |||||| || |||| |||||||| ||   |||||| |||||||||| |||||||   |||||||||||||| ||||||   | |||||||||| || |      
T  53229159 aaggtaggataaaattagattaactgtagtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgcaactgtacaaacattgaggg 53229258  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||| |||| |||| | |||||| ||||||||||| ||||| |||||| | ||| ||||||||||||| || ||||||    
T  53229259 tgttgctcactacacttttgatgctatagtgttaatttcaccagaaaaataattttcatgacttcaccttaaaatttt 53229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 54828708 - 54828883
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   ||||||  || |||||| |||||||  |||||| || ||||  |||||| || ||||  |||| ||||  |    
T  54828708 aaggtaggataaaattagattaagtgtagtcttgttcatatgatgaattgatgatgctatgaagaatgaatttttgatgtcgttgtttaaacggtggggt 54828807  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||||||| || |||||||||||||||||| || | |||| | ||| | |||||||||||||| ||||||    
T  54828808 gttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaatttt 54828883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 33378791 - 33378967
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| ||||| |  |||||  |||||||| |||||| |||  ||||||| | |||      
T  33378791 caaggtaggataaaattagattaagtgcagtcttgttaatctgatgaattgataatactatggggactgaacttttgatgtcaccgtacaaatattgggg 33378890  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |  |||||| |||| | |||||  ||||||||| |||||||   ||||||||||||||| ||||  ||||||||||||||    
T  33378891 tactactcactacacttttgatactatagtgttgacttcac---aaaagtcattctcataactttgccatagaattttcc 33378967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 4556587 - 4556543
Alignment:
Q  143 taacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  4556587 taacttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 29163895 - 29163839
Alignment:
Q  133 gttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    ||||||||||||||||||| |||||| ||||| | |||||||||||||| |||||||    
T  29163895 gttatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattttc 29163839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 45879498 - 45879546
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattttcc 45879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 47930666 - 47930714
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 49359628 - 49359676
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttcc 49359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 53811976 - 53812024
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttcc 53812024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 1089800 - 1089722
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||| |||||| |||||  |||| | ||||||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  1089800 tgttactcactacatttttgatactataatattaactttactagaaaaatcattatcat-acttcaccatagaattttcc 1089722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 32180747 - 32180794
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||    
T  32180747 ttaacttcactagaaaagtcattctcataacttcaccgtacaattttc 32180794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 22446138 - 22446247
Alignment:
Q  78 tgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaa-gtcattctcatgacttca 176  Q
    ||||| ||||||  || |||||||| |||||  ||||||||| || ||| |||||| |||| |||||||||||| | |||| |||||| |||||||||||    
T  22446138 tgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttca 22446236  T
Q  177 ccatagaattt 187  Q
    || ||||||||    
T  22446237 ccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 18272222 - 18272271
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||| ||| ||||||||||||||||||||||||||| || ||||||||    
T  18272222 gttaacgtcattagaaaagtcattctcatgacttcaccgtataattttcc 18272271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 23165838 - 23165883
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  23165838 ttaacttcactaaaaaaatcattatcatgacttcaccatagaattt 23165883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 38392628 - 38392673
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 42204391 - 42204342
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  42204391 gttaacttcatcagaaaagtcattctcacgacttcacgatagaattttcc 42204342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 3362382 - 3362283
Alignment:
Q  52 tgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcac 151  Q
    |||||| |||||||  | |||| || ||||| ||||||  || |||||||| ||||| |||||||||| || |||  ||||| |||||||||||||||||    
T  3362382 tgatgaattgatgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcac 3362283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 19606914 - 19606961
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||| |||||||||||| | || |||||||||||||||||||    
T  19606914 ttaacttcaccagaaaagtcatttttataacttcaccatagaattttc 19606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 43348315 - 43348281
Alignment:
Q  155 aaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||| ||||||||||||||||||||||||||||||    
T  43348315 aaaaatcattctcatgacttcaccatagaattttc 43348281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 2008073 - 2007964
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||  || ||||| ||||||  || ||||||||||||||  |||||||||  ||| | || | | ||||||    
T  2008073 tcttgttaatctgatgaattgatgatgctatggggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagt 2007974  T
Q  141 gttaacttca 150  Q
    ||||||||||    
T  2007973 gttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 24708153 - 24708295
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||| ||||||  |||||   ||||||||| | || | |||||||||  ||    
T  24708153 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtaca--cagtgaggtgttactcactgcagttttgatgttac-gt 24708249  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||| |||  | |||||||||| | || ||||||||||| ||||||    
T  24708250 gttaacatca--aaaaaagtcattttgataacttcaccataaaatttt 24708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 53175751 - 53175714
Alignment:
Q  153 agaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  53175751 agaaaagtcattctcataacttcaccataaaattttcc 53175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 41585413 - 41585449
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  41585413 tgttactcattatatttttgatgttatagtgttaact 41585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 42665541 - 42665589
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| | |||| ||||| |||| ||||||||||||||||||||    
T  42665541 ttaacttcaccaaaaaaatcattatcataacttcaccatagaattttcc 42665589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 8068 - 7889
Alignment:
Q  9 agcaaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtgg 108  Q
    |||||| || || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| |||||||| |||||| ||||||||||||||||||    
T  8068 agcaagttaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgg 7969  T
Q  109 aatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
      |||||||||||||| | |||||||||||||||||||||||  | |||||||||||| || ||||||||||||||||||    
T  7968 ggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 4318839 - 4319007
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| ||||| |||| |||||||  |||||  |  ||||| |||||| ||| ||||||||||||||  ||||||||||     
T  4318839 aaaattagattaagtgtattcttgttaatctaatgaattgatgatactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttactcata 4318938  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  4318939 acacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 4319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 8513382 - 8513233
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| ||| |||||| |||||||   ||||  |||||||| |||||| ||| ||||||||||||||  |||||||||  ||| | ||||| |||||||    
T  8513382 tcttgttaatatgatgaattgatgatattatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagt 8513283  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8513282 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 8513233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 1946013 - 1945833
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| ||  |||||| || ||||  |||||| | |||||| |||||| ||||| ||||||||||||      
T  1946013 caaggtatgataaaattatattaagtgtagtcttgttaacttgatgaattcatgatactatgagggctgaacttttgatgtcattctacaaacagtgggg 1945914  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttca-ctagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||||||||| ||||||||||| |||||||||||    
T  1945913 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaattttcc 1945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 5627570 - 5627391
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| ||||| |  |||||| | |||||| |||||| ||||| |||||| |||||      
T  5627570 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtgggg 5627471  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| ||| || ||||||||||||||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  5627470 tgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccttagaattttcc 5627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 7235040 - 7235218
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| ||||| |  |||||| |||||||| ||||||  ||  |||||||||||||      
T  7235040 caaggtaggataaaattagattaagtgcagtcttgttaatctgatgaattgataatactatga-gactgaacttttgatggcaccgtacaaacagtgggg 7235138  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    || |||||| |||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||    
T  7235139 tgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataacttcaccatagaattttcc 7235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 6089057 - 6088910
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| |||||||||| |||||||  ||||| ||||||||| ||||||  || | ||||||||||||   ||||||||  ||| | |||||  ||||||    
T  6089057 tcttgttaatctgatgaattgatgatactatggtgactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagt 6088958  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  6088957 gttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 7055220 - 7055399
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| |||||||  |||||| | |||||| |||||| ||||| |||||| ||||       
T  7055220 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgtcattctacaaatagtgagg 7055319  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| |||| ||| || ||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||||||||    
T  7055320 tgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttcc 7055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 33893008 - 33893186
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||| |  |||||||| ||| || |||||||||||| |||||      
T  33893008 caaggtaggataaaattagattaagtgtattcttgttaatctgatgaattgatgatactaagg-gactgaacttttaatatcattgtacaaatagtgggg 33893106  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||    
T  33893107 tgttactcacaacacttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccatagaattttcc 33893186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 3879974 - 3880123
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| | |||||||| |||||||  |||||  || ||||| |||||| |||||||||||||||| |  |||||||||  ||| | |||||  |||| |    
T  3879974 tcttgttagtctgatgaattgatgatactatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataat 3880073  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3880074 gttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttcc 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 20768234 - 20768087
Alignment:
Q  40 atcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatag 139  Q
    ||||||| |||||||||| || ||||  |||||| |||||||| ||||||  || |  ||||||| |||| || |||||| |||| | |||||| |||||    
T  20768234 atcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgccacta-acaaacaatgga-tgctactcactacacttttgatgctatag 20768137  T
Q  140 tgttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  20768136 tgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 30353363 - 30353540
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||| |||| |||| |||||||||||   ||||||  || |||||| |||||||  |||||  ||||||||  | |||  || |||||||||||||  |    
T  30353363 caaggcatgataaaattagattaagtgtattcttgtttatatgatgaattgatgatactatggagactgaactatcgatgccactgtacaaacagtgaga 30353462  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    | ||||||   ||| | ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30353463 tattactcgcaacacttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 15491793 - 15491631
Alignment:
Q  12 aaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaat 111  Q
    |||||| || |||| |||||||||||   |||||| |||||||||| |||||||  |||||| | |||||| ||||||  || |||||||| |||||  |    
T  15491793 aaggtaggataaaattagattaagtgcattcttgttaatctgatgaattgatgatactatgagggctgaacttttgatgccactgtacaaatagtggggt 15491694  T
Q  112 gttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 174  Q
    ||||||||  ||| | ||||||||| | |||||||||||| ||||||||||||||||| ||||    
T  15491693 gttactcacaacacttttgatgttacaatgttaacttcacgagaaaagtcattctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 29182331 - 29182165
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||| | |||||||||| |||||||   ||||  |||||||| ||||||  || |||| |||||||||  |||||||||      
T  29182331 aaaattagattaagtgtattcttattaatctgatgaattgatgataatatggagactgaacttttgatgacactgtataaacagtggggtgttactcaca 29182232  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||| | |||||||||||||||||||||||  |  ||| |||||||||||||||||||||| ||||||    
T  29182231 acacttttgatgttatagtgttaacttcatcaataaaatcattctcatgacttcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 6091188 - 6091363
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| |||||||||||   | |||| ||||| |||| |||||||  ||| ||  ||||||| ||||||  ||||||||||||| |||      
T  6091188 caaggtatgataaaattagattaagtgtagttttgttaatctaatgaattgatgatactacgagtactgaacttttgatggcattgtacaaacaatggtg 6091287  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattt 187  Q
    ||||||||| |||||| || |||||| | ||||||||| || | |||| | ||| |||||||||||| |||||||||    
T  6091288 tgttactcactacattttttatgttaca-tgttaactttaccaaaaaaattattttcatgacttcacaatagaattt 6091363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 18498565 - 18498433
Alignment:
Q  59 ttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa-tgttactcattacattgttgatgttatagtgttaacttcactagaaa 157  Q
    |||||||  |||||| |||||||| ||||||  || ||||||||| ||||   |||| |||| |||| | |||||| |||| |||||||||||| || ||    
T  18498565 ttgatgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaa 18498466  T
Q  158 agtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||| ||||| ||||||    
T  18498465 agtcattctcatgacttcactatagatttttcc 18498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 33619002 - 33618834
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcatt 121  Q
    |||| |||||||||||   |||||| |||||||||| |||||||  ||||||  ||||||| ||||||  ||  ||||||| | |||  || |||||| |    
T  33619002 aaaattagattaagtgcagtcttgttaatctgatgaattgatgatactatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcact 33618903  T
Q  122 acattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||| | ||||||  |||||||| ||||||| ||||||||  ||| |||||||||||| |||||||||||    
T  33618902 acacttttgatgcgatagtgttgacttcaccagaaaagtatttcccatgacttcaccgtagaattttcc 33618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 24662189 - 24662238
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24662189 gttaacttcactagaaaagtcattatcatgactttaccatagaattttcc 24662238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 19631797 - 19631749
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcc 19631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 21017147 - 21017294
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| | |||||||| |||||||  |||||  |||||||| ||||||  ||||||||||| | |||  |||||||||  ||||| || ||  || | |    
T  21017147 tcttgttagtctgatgaattgatgatactatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaat 21017246  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    ||||||||||| | |||||||||| || |||||||||| || ||||||    
T  21017247 gttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttt 21017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 11084152 - 11084200
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||| || |||||||| ||| |||||||||||||||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttcc 11084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 3005393 - 3005440
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 189  Q
    |||||||||  | |||||||||||||||||||||| ||||||||||||    
T  3005393 ttaacttcatcaaaaaagtcattctcatgacttcaacatagaattttc 3005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 6614036 - 6614082
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||| |||||||||||||| |||| ||||||||| ||||||    
T  6614036 ttaacttcaccagaaaagtcattcttatgatttcaccatataatttt 6614082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 30338524 - 30338478
Alignment:
Q  142 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||||| ||||||||||||||  |||||| |||||||||||    
T  30338524 ttaacttcactaaaaaagtcattctcacaacttcatcatagaatttt 30338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 283 - 134
Alignment:
Q  41 tcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagt 140  Q
    |||||| | |||||||| |||||||  |||||| |||||||| ||||||  |||||||||||||||||| |||||||||  ||||| || ||  || |||    
T  283 tcttgttagtctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagt 184  T
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  183 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 408435 - 408559
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    ||||||| || |||| |||||||||||   |||||| |||||||||| |||||||  ||| || |||||||| |||||||||||| ||||||| ||        
T  408435 caaggtaggataaaattagattaagtgtagtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatttcattttacaaacggtaagg 408533  T
Q  111 tgttactcattacattgttgatgtta 136  Q
    |||||||||||||||| |||||||||    
T  408534 tgttactcattacatttttgatgtta 408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 94473 - 94547
Alignment:
Q  95 tgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcat 169  Q
    ||||||||||||||  ||||||||| |||| | ||||||||||| |||||||||||  |||||||||||| ||||    
T  94473 tgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 408702 - 408754
Alignment:
Q  138 agtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||||| | |||| ||||| | |||||||||||||||||||||||    
T  408702 agtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttcc 408754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 146022 - 146199
Alignment:
Q  11 caaggtatgagaaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaa 110  Q
    |||||||||| |||| || ||||||||   |||||| || ||||||| |||||||  |||||| | |||||| |||||| ||||| |||||| | |||      
T  146022 caaggtatgataaaattatattaagtgtagtcttgttaacctgatgaattgatgatactatgaaggctgaacttttgatgtcattctacaaataatgggg 146121  T
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||||||||||||||| || |||||||| ||||||||| || | |||| ||||||| ||||||||||| |||||||||    
T  146122 tgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaatttt 146199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 44099 - 43959
Alignment:
Q  48 aatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||| |||||||  |||||| |||||||| ||| ||  |||||||||||||  ||  |||||||||||||||| ||||| |||||| |||||||    
T  44099 aatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaact 44000  T
Q  148 tcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||| | ||||||| |||| | |||||||||||||||||||    
T  43999 tcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 154688 - 154828
Alignment:
Q  48 aatctgatgagttgatgagtctatgatgactgaacgtttgatttcattgtacaaacagtggaatgttactcattacattgttgatgttatagtgttaact 147  Q
    |||||||||| |||||||  |||||| |||||||| ||| ||  |||||||||||||  ||  |||||||||||||||| ||||| |||||| |||||||    
T  154688 aatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaact 154787  T
Q  148 tcactagaaaagtcattctcatgacttcaccatagaatttt 188  Q
    |||| | ||||||| |||| | |||||||||||||||||||    
T  154788 tcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 42427 - 42348
Alignment:
Q  111 tgttactcattacattgttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||  ||| | |||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||    
T  42427 tgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcc 42348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 100883 - 100821
Alignment:
Q  128 ttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  100883 ttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 12077 - 11908
Alignment:
Q  22 aaaagtagattaagtgggatcttgtgaatctgatgagttgatgagtctatgatgactgaacgtttgatttcattg-tacaaacagtggaa-tgttactca 119  Q
    |||| |||||||||||   |||||| |||||||||| |||||||   ||||| |||||||| ||||||  || || |||||||| |||   |||||||||    
T  12077 aaaattagattaagtgtattcttgttaatctgatgaattgatgatattatgaggactgaacttttgataccactgatacaaacaatgggggtgttactca 11978  T
Q  120 ttacattgttgatgttatagtgttaacttcactagaaaagtcatt-ctcatgacttcaccatagaatttt 188  Q
      ||| | || ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  11977 caacacttttaatgttatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 12137 - 12186
Alignment:
Q  141 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 190  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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