View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17110_high_4 (Length: 264)
Name: NF17110_high_4
Description: NF17110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17110_high_4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 14 - 264
Target Start/End: Complemental strand, 32861334 - 32861084
Alignment:
| Q |
14 |
agaggcccttgaagaagaaaatcgcagagaaagggaacactgaaaatttatatgttggggcggatgacccgaggttaagcagaatatgagtttgggtatc |
113 |
Q |
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| T |
32861334 |
agaggcccttgaagaagaaaatcgcagagaaagggaacactgaaaatttatatgttggggcggatgacccgaggttaagcagaatatgagtttgggtatc |
32861235 |
T |
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| Q |
114 |
atttaattaacgggttaggataggggtccattccggaactatcgggtcggatcaagtccgagtaaaatataaataaagtggagataccgataaacgagtg |
213 |
Q |
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| T |
32861234 |
atttaattaacgggttaggataggggtccattccggaactatcgggtcggatcaagtccgagtaaaatataaataaagtggagataccgataaacgagtg |
32861135 |
T |
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| Q |
214 |
aagtgaagacggaaatggaggaattgaaacaagcactgaagaattgtaatt |
264 |
Q |
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| T |
32861134 |
aagtgaagacggaaatggaggaattgcaacaagcactgaagaattgtaatt |
32861084 |
T |
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