View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17112_high_22 (Length: 297)

Name: NF17112_high_22
Description: NF17112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17112_high_22
NF17112_high_22
[»] chr2 (39 HSPs)
chr2 (194-297)||(10445474-10445577)
chr2 (194-297)||(34682364-34682467)
chr2 (194-297)||(8040024-8040127)
chr2 (201-297)||(14699037-14699133)
chr2 (194-297)||(20522184-20522287)
chr2 (194-297)||(21629908-21630010)
chr2 (194-297)||(39482895-39482998)
chr2 (195-297)||(13569293-13569395)
chr2 (194-297)||(16940239-16940342)
chr2 (194-297)||(17010904-17011007)
chr2 (194-297)||(33118100-33118203)
chr2 (195-297)||(8390180-8390282)
chr2 (195-297)||(34388823-34388925)
chr2 (94-183)||(40653878-40653968)
chr2 (94-182)||(18829450-18829539)
chr2 (195-297)||(28259207-28259310)
chr2 (194-297)||(17865167-17865270)
chr2 (194-297)||(33528651-33528754)
chr2 (98-183)||(26591639-26591725)
chr2 (195-297)||(23078500-23078604)
chr2 (194-297)||(31056006-31056111)
chr2 (195-297)||(42039699-42039803)
chr2 (195-297)||(10707282-10707384)
chr2 (195-294)||(36757795-36757896)
chr2 (230-297)||(25398496-25398562)
chr2 (96-183)||(15512088-15512179)
chr2 (252-297)||(25403655-25403700)
chr2 (233-297)||(2838060-2838124)
chr2 (217-297)||(2869723-2869803)
chr2 (196-297)||(3491717-3491817)
chr2 (213-296)||(1345572-1345657)
chr2 (244-297)||(27149324-27149377)
chr2 (210-274)||(38312368-38312433)
chr2 (93-141)||(4554719-4554767)
chr2 (230-294)||(11098960-11099023)
chr2 (230-294)||(14291489-14291552)
chr2 (230-294)||(39812009-39812072)
chr2 (97-141)||(42705530-42705574)
chr2 (230-294)||(44312645-44312708)
[»] chr7 (38 HSPs)
chr7 (194-297)||(9190038-9190141)
chr7 (194-297)||(29159767-29159870)
chr7 (194-297)||(33332480-33332583)
chr7 (194-297)||(20284053-20284156)
chr7 (194-297)||(2647726-2647829)
chr7 (195-297)||(49091626-49091728)
chr7 (194-297)||(2580351-2580457)
chr7 (194-297)||(9185195-9185296)
chr7 (197-297)||(46516340-46516440)
chr7 (194-297)||(4796697-4796800)
chr7 (197-297)||(21983250-21983351)
chr7 (195-297)||(44848714-44848817)
chr7 (194-296)||(21988871-21988972)
chr7 (195-297)||(55912-56014)
chr7 (94-183)||(31252286-31252376)
chr7 (194-297)||(23403043-23403146)
chr7 (218-297)||(28617255-28617334)
chr7 (194-297)||(35960780-35960883)
chr7 (194-297)||(47263641-47263743)
chr7 (95-172)||(13072356-13072433)
chr7 (194-247)||(9235635-9235688)
chr7 (198-297)||(5817300-5817399)
chr7 (94-177)||(20606218-20606302)
chr7 (195-297)||(2479301-2479403)
chr7 (201-274)||(30814564-30814637)
chr7 (230-297)||(21639809-21639875)
chr7 (96-146)||(44832474-44832525)
chr7 (114-183)||(20609531-20609602)
chr7 (196-294)||(18408730-18408827)
chr7 (229-294)||(19992313-19992377)
chr7 (94-178)||(23582561-23582646)
chr7 (229-294)||(24024347-24024411)
chr7 (210-272)||(26417445-26417509)
chr7 (210-274)||(27347945-27348010)
chr7 (210-274)||(47676111-47676176)
chr7 (230-294)||(2057966-2058029)
chr7 (230-294)||(4866731-4866794)
chr7 (112-171)||(32073217-32073277)
[»] scaffold0148 (1 HSPs)
scaffold0148 (194-297)||(10693-10796)
[»] chr8 (35 HSPs)
chr8 (194-297)||(4696626-4696729)
chr8 (194-297)||(26403260-26403363)
chr8 (194-297)||(9765849-9765953)
chr8 (197-297)||(19752424-19752524)
chr8 (197-297)||(23799607-23799707)
chr8 (194-297)||(6127184-6127288)
chr8 (195-297)||(4455991-4456095)
chr8 (195-297)||(19175784-19175888)
chr8 (195-297)||(7412304-7412408)
chr8 (94-183)||(15863105-15863194)
chr8 (197-281)||(5702529-5702613)
chr8 (94-183)||(29351955-29352045)
chr8 (94-183)||(32539961-32540051)
chr8 (230-297)||(31071259-31071326)
chr8 (95-172)||(32750499-32750577)
chr8 (230-297)||(1261984-1262050)
chr8 (194-294)||(6813646-6813747)
chr8 (210-274)||(33352278-33352343)
chr8 (230-294)||(18870595-18870658)
chr8 (230-297)||(26287902-26287968)
chr8 (230-297)||(26301159-26301225)
chr8 (230-297)||(26313153-26313219)
chr8 (117-183)||(40400990-40401057)
chr8 (213-274)||(5689399-5689461)
chr8 (96-172)||(29892052-29892126)
chr8 (94-167)||(379017-379090)
chr8 (210-274)||(15212914-15212979)
chr8 (229-294)||(39784843-39784907)
chr8 (230-294)||(6311298-6311361)
chr8 (230-294)||(7289947-7290010)
chr8 (230-294)||(10689176-10689239)
chr8 (230-294)||(18853201-18853264)
chr8 (230-294)||(25328299-25328362)
chr8 (230-294)||(33037839-33037902)
chr8 (230-294)||(36979378-36979441)
[»] chr4 (40 HSPs)
chr4 (194-297)||(39245958-39246061)
chr4 (195-297)||(38152469-38152571)
chr4 (194-297)||(10047343-10047446)
chr4 (197-297)||(36315259-36315359)
chr4 (197-297)||(36329468-36329568)
chr4 (194-297)||(5269221-5269324)
chr4 (195-297)||(16623323-16623426)
chr4 (194-297)||(24333773-24333876)
chr4 (195-297)||(5396701-5396805)
chr4 (194-297)||(3796549-3796653)
chr4 (197-297)||(5143226-5143326)
chr4 (195-297)||(3777514-3777616)
chr4 (194-272)||(54867148-54867226)
chr4 (197-294)||(5147644-5147741)
chr4 (194-297)||(25862052-25862155)
chr4 (195-297)||(16630710-16630813)
chr4 (92-182)||(13502103-13502193)
chr4 (194-279)||(42599622-42599707)
chr4 (197-297)||(6743445-6743544)
chr4 (195-274)||(8689536-8689617)
chr4 (94-159)||(29134138-29134204)
chr4 (194-297)||(31985664-31985766)
chr4 (117-183)||(20629010-20629077)
chr4 (196-297)||(28468559-28468659)
chr4 (234-297)||(18709164-18709227)
chr4 (234-297)||(22782738-22782801)
chr4 (94-167)||(4038204-4038278)
chr4 (94-167)||(28876814-28876888)
chr4 (251-297)||(39774335-39774381)
chr4 (229-294)||(3814024-3814088)
chr4 (210-274)||(5429807-5429872)
chr4 (229-294)||(5732665-5732729)
chr4 (210-274)||(12739525-12739590)
chr4 (229-294)||(18855727-18855791)
chr4 (210-274)||(26175611-26175676)
chr4 (210-274)||(34570389-34570454)
chr4 (230-294)||(9224428-9224491)
chr4 (230-294)||(24741941-24742004)
chr4 (230-294)||(29760642-29760705)
chr4 (230-294)||(56146732-56146795)
[»] chr3 (44 HSPs)
chr3 (194-297)||(1417510-1417613)
chr3 (197-297)||(21711190-21711290)
chr3 (194-297)||(3716022-3716125)
chr3 (195-297)||(8370506-8370610)
chr3 (197-297)||(6794733-6794833)
chr3 (194-297)||(1736325-1736428)
chr3 (194-297)||(18552903-18553006)
chr3 (194-297)||(36029057-36029160)
chr3 (194-297)||(33386686-33386790)
chr3 (195-297)||(27974972-27975075)
chr3 (195-297)||(30709810-30709914)
chr3 (194-297)||(3328376-3328479)
chr3 (194-297)||(26298952-26299055)
chr3 (194-297)||(37466255-37466358)
chr3 (194-297)||(48438178-48438281)
chr3 (194-297)||(27452922-27453025)
chr3 (194-294)||(4386950-4387051)
chr3 (195-297)||(16264313-16264417)
chr3 (197-297)||(40592802-40592903)
chr3 (194-297)||(25795744-25795848)
chr3 (194-297)||(40844616-40844718)
chr3 (194-297)||(27986466-27986569)
chr3 (195-297)||(39040012-39040116)
chr3 (94-172)||(8257436-8257515)
chr3 (194-297)||(32143285-32143388)
chr3 (210-274)||(29813191-29813256)
chr3 (217-282)||(47923941-47924006)
chr3 (194-281)||(24695200-24695287)
chr3 (94-183)||(3159294-3159384)
chr3 (96-183)||(16094637-16094725)
chr3 (100-158)||(35937825-35937884)
chr3 (210-272)||(5236432-5236495)
chr3 (230-297)||(26928621-26928687)
chr3 (195-297)||(35925446-35925547)
chr3 (98-183)||(219093-219178)
chr3 (229-294)||(18656435-18656499)
chr3 (230-294)||(2671619-2671682)
chr3 (230-294)||(7167245-7167308)
chr3 (230-294)||(8477363-8477426)
chr3 (230-294)||(8739096-8739159)
chr3 (230-294)||(9091334-9091397)
chr3 (230-294)||(22173216-22173279)
chr3 (230-294)||(40372828-40372891)
chr3 (234-282)||(47701669-47701717)
[»] chr1 (27 HSPs)
chr1 (194-297)||(775636-775739)
chr1 (194-297)||(47703966-47704069)
chr1 (194-297)||(19072891-19072995)
chr1 (194-297)||(19120781-19120885)
chr1 (194-297)||(32889402-32889506)
chr1 (194-297)||(13598362-13598465)
chr1 (194-297)||(29651775-29651878)
chr1 (194-297)||(47098854-47098957)
chr1 (195-297)||(9476226-9476328)
chr1 (195-295)||(3281671-3281773)
chr1 (194-297)||(27104402-27104505)
chr1 (195-294)||(26644930-26645031)
chr1 (194-297)||(16124546-16124650)
chr1 (194-297)||(47102871-47102974)
chr1 (194-297)||(13604653-13604757)
chr1 (94-183)||(42412446-42412536)
chr1 (195-297)||(21536599-21536703)
chr1 (195-297)||(37069733-37069837)
chr1 (101-171)||(17744725-17744796)
chr1 (196-297)||(19358873-19358974)
chr1 (230-297)||(24202799-24202865)
chr1 (229-294)||(25445110-25445174)
chr1 (229-294)||(39445500-39445564)
chr1 (229-294)||(44023894-44023958)
chr1 (194-297)||(17345549-17345652)
chr1 (253-297)||(19361462-19361506)
chr1 (253-297)||(19380102-19380146)
[»] chr5 (30 HSPs)
chr5 (195-297)||(17003990-17004092)
chr5 (194-297)||(42127440-42127543)
chr5 (194-297)||(11917002-11917105)
chr5 (194-297)||(31300626-31300729)
chr5 (195-297)||(9353362-9353465)
chr5 (194-282)||(24553551-24553639)
chr5 (194-297)||(28832223-28832326)
chr5 (195-297)||(36932380-36932483)
chr5 (194-297)||(3880264-3880366)
chr5 (194-297)||(15464495-15464599)
chr5 (202-297)||(10281722-10281818)
chr5 (194-297)||(19588710-19588813)
chr5 (195-297)||(12084205-12084309)
chr5 (195-297)||(14520193-14520297)
chr5 (95-171)||(30922425-30922502)
chr5 (96-172)||(8788413-8788491)
chr5 (94-167)||(15959445-15959519)
chr5 (194-294)||(6741815-6741916)
chr5 (194-297)||(33030970-33031075)
chr5 (234-297)||(4410238-4410301)
chr5 (230-297)||(38192174-38192240)
chr5 (230-297)||(38219399-38219465)
chr5 (94-167)||(31501218-31501292)
chr5 (194-255)||(38747152-38747213)
chr5 (194-234)||(11181925-11181965)
chr5 (230-294)||(31180215-31180278)
chr5 (230-294)||(43592280-43592343)
chr5 (230-294)||(43598725-43598788)
chr5 (230-294)||(43604217-43604280)
chr5 (230-294)||(43609709-43609772)
[»] scaffold0006 (3 HSPs)
scaffold0006 (194-297)||(2456-2559)
scaffold0006 (194-297)||(5647-5750)
scaffold0006 (194-297)||(133310-133414)
[»] chr6 (22 HSPs)
chr6 (194-297)||(10077195-10077298)
chr6 (194-297)||(31979477-31979580)
chr6 (194-297)||(31936551-31936654)
chr6 (195-297)||(5757508-5757611)
chr6 (195-297)||(31086503-31086605)
chr6 (194-297)||(4629917-4630021)
chr6 (95-178)||(10231895-10231979)
chr6 (197-297)||(22963667-22963766)
chr6 (197-297)||(23824627-23824726)
chr6 (195-281)||(5017515-5017601)
chr6 (195-297)||(21356000-21356103)
chr6 (194-297)||(5572271-5572374)
chr6 (194-281)||(18232809-18232896)
chr6 (94-184)||(28931602-28931693)
chr6 (94-172)||(23217522-23217600)
chr6 (194-297)||(21801374-21801482)
chr6 (230-294)||(14737597-14737660)
chr6 (100-162)||(11797094-11797157)
chr6 (194-297)||(22708982-22709085)
chr6 (229-294)||(33335963-33336027)
chr6 (230-294)||(14742457-14742520)
chr6 (230-294)||(22010718-22010781)
[»] scaffold0036 (1 HSPs)
scaffold0036 (195-295)||(85648-85748)
[»] scaffold0140 (1 HSPs)
scaffold0140 (194-297)||(8449-8553)
[»] scaffold0495 (1 HSPs)
scaffold0495 (95-178)||(8615-8699)
[»] scaffold0087 (2 HSPs)
scaffold0087 (195-297)||(43991-44094)
scaffold0087 (195-297)||(36862-36966)
[»] scaffold0098 (1 HSPs)
scaffold0098 (195-297)||(45217-45320)
[»] scaffold0188 (2 HSPs)
scaffold0188 (230-297)||(17982-18048)
scaffold0188 (230-297)||(24075-24141)
[»] scaffold0464 (1 HSPs)
scaffold0464 (229-294)||(363-427)
[»] scaffold0355 (1 HSPs)
scaffold0355 (230-294)||(9663-9726)


Alignment Details
Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 10445577 - 10445474
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||| ||||||| ||||||||||    
T  10445577 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcc 10445478  T
Q  294 acta 297  Q
    ||||    
T  10445477 acta 10445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 34682467 - 34682364
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||  ||||||||||| ||||||| ||||||||||    
T  34682467 taaatataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatcc 34682368  T
Q  294 acta 297  Q
    ||||    
T  34682367 acta 34682364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 8040024 - 8040127
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||   |||||||||||| ||||||||||| ||||||| ||||||||||    
T  8040024 taaagataagcaatgaaggagaggaaaaaatacatcaagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatcc 8040123  T
Q  294 acta 297  Q
    ||||    
T  8040124 acta 8040127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 14699133 - 14699037
Alignment:
Q  201 aagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||||||    
T  14699133 aagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccacta 14699037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 20522184 - 20522287
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||   |||||||||    
T  20522184 taaagataagaaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatcc 20522283  T
Q  294 acta 297  Q
    ||||    
T  20522284 acta 20522287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 21629908 - 21630010
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||   |||||||||||| ||||| ||||| ||||||| ||||||||||    
T  21629908 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgacctaatct-ggggagagagcagctctccaatcc 21630006  T
Q  294 acta 297  Q
    ||||    
T  21630007 acta 21630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 39482895 - 39482998
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| | |||| | |||||||||||| ||| ||||||| |||||||  |||||||||    
T  39482895 taaagataaacaatgaaagagaggaacaaacacaccaagattgttgacctagttcggtccaatatgacctaatatgggggagagagcaggcctccaatcc 39482994  T
Q  294 acta 297  Q
    ||||    
T  39482995 acta 39482998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 13569293 - 13569395
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||| |||||||||| ||||| ||||||| ||| |||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||||    
T  13569293 aaagataatcaatgaaagaaaggaataaacacaccaaaattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 13569392  T
Q  295 cta 297  Q
    |||    
T  13569393 cta 13569395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 16940342 - 16940239
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||| || | |||||||||||  ||||||||||| ||| |||  |||||||||    
T  16940342 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatcc 16940243  T
Q  294 acta 297  Q
    ||||    
T  16940242 acta 16940239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 17011007 - 17010904
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||| || | |||||||||||  ||||||||||| ||| |||  |||||||||    
T  17011007 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatcc 17010908  T
Q  294 acta 297  Q
    ||||    
T  17010907 acta 17010904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 33118100 - 33118203
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||   ||||| | |||||||||||| ||| ||||||| |||||||  |||||||||    
T  33118100 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttggctcagttcggtccaatatgacctaatttgggggagagagcagccctccaatcc 33118199  T
Q  294 acta 297  Q
    ||||    
T  33118200 acta 33118203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 8390282 - 8390180
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||| |||||||| | ||||||||||| ||| |||||||| |||||| | ||||| |||||| ||| ||||||| ||||||| |||||||||||    
T  8390282 aaagataagcgatgaaagaaatgaacaaacacaccaaaattgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatcca 8390183  T
Q  295 cta 297  Q
    |||    
T  8390182 cta 8390180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 34388823 - 34388925
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||| ||| |||||| ||||||||||||| | |||||||||| ||| || | |||||||||||| ||||||||||| |||| || |||||||||||    
T  34388823 aaagataaacaaagaaagaaaggaacaaacacaccgagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatcca 34388922  T
Q  295 cta 297  Q
    |||    
T  34388923 cta 34388925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 40653878 - 40653968
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||| | ||||||  ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  40653878 ggaacaaaaatgcaatttcgcacgttttgattgaaaaataaaactaaatcgaaacatctttgaaatgctacgaaattttgcagatcctttt 40653968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 18829450 - 18829539
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatctttt 182  Q
    ||||||||||| ||||||  |||||||| ||| |||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  18829450 ggaacaaaattgcaatttcgcacgttttcgttgaaaaattaaaataaatcgaaacgtctttgaaatgctgcgaaattttgcagatctttt 18829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 28259310 - 28259207
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| || |||||||||| |||  ||||||||| |||||| | |||||||||||| ||| ||||||| ||||||| |||||||||    
T  28259310 aaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatc 28259212  T
Q  293 cacta 297  Q
    |||||    
T  28259211 cacta 28259207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 17865167 - 17865270
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||||||| |||||||| |||| |||||||||||| ||||||   || ||||||||| ||||||||||| ||||||   |||||||||    
T  17865167 taaagataatcaatgaaagaaaggaacaatcacaccaagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatcc 17865266  T
Q  294 acta 297  Q
    ||||    
T  17865267 acta 17865270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 33528754 - 33528651
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||| ||||  | ||||||   |||||||||    
T  33528754 taaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatcc 33528655  T
Q  294 acta 297  Q
    ||||    
T  33528654 acta 33528651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 26591639 - 26591725
Alignment:
Q  98 caaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||| ||||||  |||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||| ||||| ||||    
T  26591639 caaaattgcaatttcgcacgttttggttgaaaaataaaaataaattgaaatatctttgaaatgctacgaaactttgcagatcctttt 26591725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 23078604 - 23078500
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||  |||||||||||| |||  || |||||| |||||| |||||||||||||| ||| ||||||| ||| ||  |||||||||    
T  23078604 aaagataagcaatgaaagaatggaacaaacacaccaaaagaatgttgacccagttcgatccaatatgacctaatatgggggagagaacaactctccaatc 23078505  T
Q  293 cacta 297  Q
    |||||    
T  23078504 cacta 23078500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 31056006 - 31056111
Alignment:
Q  194 taaagataagcaatgaaagaga-ggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||||||||||||| | |||||||||||| ||| ||||||||| | |||| | | |||||||||| ||||| ||||| ||||||| ||||||||    
T  31056006 taaagataagcaatgaaagaaaaggaacaaacacaccaaagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaat 31056105  T
Q  292 ccacta 297  Q
    ||||||    
T  31056106 ccacta 31056111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 42039803 - 42039699
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| |||| ||| |||| |||  ||||||||||| |||| | |||||||||||| |||||| |||| ||||||| |||| ||||    
T  42039803 aaagataagcaatgaaagaaaggagcaagcacaccaaaagattgttgatctagttcggtccaatatgacctaatctgtgggagagagcagctctctaatc 42039704  T
Q  293 cacta 297  Q
    |||||    
T  42039703 cacta 42039699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 10707384 - 10707282
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| |||||| | ||| ||||||| | |||||||||| |||||| | |||||||||||| ||| ||||||| ||| ||  |||||||||||    
T  10707384 aaagataagcaaagaaagaaatgaataaacacaccgagattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatcca 10707285  T
Q  295 cta 297  Q
    |||    
T  10707284 cta 10707282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 36757896 - 36757795
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatc--aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||| ||| || | |||||||||||| ||||||||||  | | ||| |||||||||    
T  36757896 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccaattcggtccaatatgacctaatctgggggggataacagctctccaatc 36757797  T
Q  293 ca 294  Q
    ||    
T  36757796 ca 36757795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 25398496 - 25398562
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  25398496 aagattgttgacccagttc-agccaatatgacctaatctgggggagagagcagctctccaatccacta 25398562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 15512088 - 15512179
Alignment:
Q  96 aacaaaattacaatttaacacgttttggt-taaaaat---aaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||| ||||||  ||||||||||| |||||||   ||||| |||||||||||| ||| |||||||||||| ||||| ||||| ||||    
T  15512088 aacaaaattgcaatttcgcacgttttggtctaaaaattaaaaaaacaaatcgaaacatttttaaaatgctacgaatttttgcagatcctttt 15512179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 25403655 - 25403700
Alignment:
Q  252 ccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  25403655 ccaatatgacctaatctgggggagagagcagctctccaatccacta 25403700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 2838124 - 2838060
Alignment:
Q  233 attgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||| |||||| | |||||||||||| | ||||||||| ||||||  ||||||||||||||    
T  2838124 attgttgacccagttcggtccaatatgacctactctgggggagagagcacatctccaatccacta 2838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 2869803 - 2869723
Alignment:
Q  217 gaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||| |||||| | |||||| | |||||||||||| | ||| ||||| |||| || ||||||||||||||    
T  2869803 gaacaaacacaccaatattgtttacccagttcggtccaatatgacctactctaggggagagagtagctctccaatccacta 2869723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 3491717 - 3491817
Alignment:
Q  196 aagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||| ||||| || ||||||||||| |||  ||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||    
T  3491717 aagataagcaa-gaaag-gaagaacaaacacaccaaaagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcc 3491813  T
Q  294 acta 297  Q
    ||||    
T  3491814 acta 3491817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 1345657 - 1345572
Alignment:
Q  213 agaggaacaaacacatcaaga--ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||| |||||||||| |||||  ||||||| |||||| | |||||||||||| | ||||||||| ||||||  ||||| |||||||    
T  1345657 agagaaacaaacacaccaagaaattgttgacccagttcggtccaatatgacctactctgggggagagagcacctctccgatccact 1345572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 27149377 - 27149324
Alignment:
Q  244 agtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||| |||||||||||| | | ||||||| ||||||| ||||||||||||||    
T  27149377 agtttggtccaatatgacctactatgggggagagagcagctctccaatccacta 27149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 38312433 - 38312368
Alignment:
Q  210 aagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||||  ||||  |||||||||||    
T  38312433 aagagaggaacaaacacatcaaagattgttgacccagttcggtccaacttgacataatctggggga 38312368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 4554767 - 4554719
Alignment:
Q  93 tggaacaaaattacaatttaacacgttttggttaaaaataaaaataaat 141  Q
    |||||||||||| ||||||  ||| |||||||| |||||||||||||||    
T  4554767 tggaacaaaatttcaattttgcactttttggttgaaaataaaaataaat 4554719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 11099023 - 11098960
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  11099023 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 11098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 14291489 - 14291552
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  14291489 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 14291552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 39812072 - 39812009
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  39812072 aagattgttgaaccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 39812009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 42705574 - 42705530
Alignment:
Q  97 acaaaattacaatttaacacgttttggttaaaaataaaaataaat 141  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||    
T  42705574 acaaaattacaattttacacgtttttgttaaaaaacaaaataaat 42705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 44312708 - 44312645
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  44312708 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 44312645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 9e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 9190141 - 9190038
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| | ||||||||| ||||||| ||||||||||    
T  9190141 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatcc 9190042  T
Q  294 acta 297  Q
    ||||    
T  9190041 acta 9190038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 29159767 - 29159870
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| ||||| ||||| ||||||| ||||||||||    
T  29159767 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatcc 29159866  T
Q  294 acta 297  Q
    ||||    
T  29159867 acta 29159870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 33332583 - 33332480
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| |||| ||||||||| ||||||||||| |||||||  |||||||||    
T  33332583 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatcc 33332484  T
Q  294 acta 297  Q
    ||||    
T  33332483 acta 33332480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 20284053 - 20284156
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  20284053 taaagataagaaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 20284152  T
Q  294 acta 297  Q
    ||||    
T  20284153 acta 20284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 2647829 - 2647726
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| || |  ||||||||||| | ||||||||| |||||||  |||||||||    
T  2647829 taaagataagcaatgaaagaaaggaacaaacacatcaagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatcc 2647730  T
Q  294 acta 297  Q
    ||||    
T  2647729 acta 2647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 49091626 - 49091728
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| |||||||||| || |||||||||||| |||||||  |||||||||||| ||||||||| | ||||||  |||||||||||    
T  49091626 aaagataagcaatgaaagaaaggaacaaacgcaccaagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatcca 49091725  T
Q  295 cta 297  Q
    |||    
T  49091726 cta 49091728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 2580351 - 2580457
Alignment:
Q  194 taaagataagcaatgaaa---gagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaa 290  Q
    ||||||||||||||||||   |||||||||||||||| |||||||||||| ||| || | |||||||||||| | ||||||||| ||||||| |||||||    
T  2580351 taaagataagcaatgaaaaaagagaggaacaaacacaccaagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaa 2580450  T
Q  291 tccacta 297  Q
    |||||||    
T  2580451 tccacta 2580457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 9185296 - 9185195
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||| | |||||||| ||| | ||||||||| |||| || ||||||||||    
T  9185296 taaagataagcaatgaaagagaggaacaaacac--caagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatcc 9185199  T
Q  294 acta 297  Q
    ||||    
T  9185198 acta 9185195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 46516440 - 46516340
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||||| |||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||| ||||| |||||||  ||||||||||||    
T  46516440 agataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccact 46516341  T
Q  297 a 297  Q
    |    
T  46516340 a 46516340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 4796800 - 4796697
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||| | |||||| | ||||| |||||| ||||||||||| | |||||  ||| |||||    
T  4796800 taaagataagcaatgagagaaaggaacaaacacaccaagattgttaacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatcc 4796701  T
Q  294 acta 297  Q
    ||||    
T  4796700 acta 4796697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 21983250 - 21983351
Alignment:
Q  197 agataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccac 295  Q
    |||||||||| |||||| | ||||||||  || | |||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||||||||||||    
T  21983250 agataagcaacgaaagaaaaggaacaaatgcaccgagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccac 21983349  T
Q  296 ta 297  Q
    ||    
T  21983350 ta 21983351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 44848817 - 44848714
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||| ||||| |||  ||||||||| |||||| | | |||||||||| || |||||||| ||||||| |||||||||    
T  44848817 aaagataagcaatgaaaga-aggaacatacacaccaaaagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatc 44848719  T
Q  293 cacta 297  Q
    |||||    
T  44848718 cacta 44848714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 21988871 - 21988972
Alignment:
Q  194 taaagataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| | |||||||||||| | |||||||||| |||||| | |||||||||||| ||||||| ||  ||||||  |||||||||    
T  21988871 taaagataagcaatgaaagaaaaggaacaaacacaccgagattgttgacccagttcggtccaatatgacctaatctggagg--agagcaactctccaatc 21988968  T
Q  293 cact 296  Q
    ||||    
T  21988969 cact 21988972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 55912 - 56014
Alignment:
Q  195 aaagataagcaatgaaag-agaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||| ||| | ||||||||||||| ||||||| |||| |||||| | |||||||||||| ||||| ||||| |||||||  |||||||||    
T  55912 aaagataagcaatggaaggaaaggaacaaacacaccaagattattgacccagttcggtccaatatgacctaatct-ggggagagagcagccctccaatcc 56010  T
Q  294 acta 297  Q
    ||||    
T  56011 acta 56014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 31252376 - 31252286
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||||| ||||||| ||||||||| || |||||||||||||||| |||||||| |||||||| || |||| |||| ||||| ||||    
T  31252376 ggaacaaaattgcaatttagcacgttttgattcaaaaataaaaataaattgaaacatcattgaaatgttatgaaactttgcagatcctttt 31252286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 23403146 - 23403043
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||||| ||| || | || ||||||||| |||||| ||||  ||||||  ||||||||     
T  23403146 taaatataagcaatgaaagaaaggaacaaacacactaagattgttgacccaattcggtctaatatgacctaatctgagggagtgagcagccctccaatct 23403047  T
Q  294 acta 297  Q
    ||||    
T  23403046 acta 23403043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 28617334 - 28617255
Alignment:
Q  218 aacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||||| ||| |||||| | |||||| | |||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  28617334 aacaaacacaccaatattgtttacccagttcggtccaatatgacctactctgggggagagagcagctctccaatccacta 28617255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 35960780 - 35960883
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||| ||| || || | ||||||||||| |||||||||||| | |||| | | |||||||||| ||||||||||| |||||||  |||||| ||    
T  35960780 taaagataagaaattaatgaaatgaacaaacacaccaagattgttgaccgagttcggttcaatatgacctaatctgggggagagagcagccctccaaacc 35960879  T
Q  294 acta 297  Q
    ||||    
T  35960880 acta 35960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 47263641 - 47263743
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||||||||||| | || |||||||||| |||  ||||||||| |||||| | |||||||||||| ||| ||||||  ||||||| ||||||||    
T  47263641 taaagataagcaatgaaata-agaaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatatggggg--agagcagctctccaat 47263737  T
Q  292 ccacta 297  Q
    ||||||    
T  47263738 ccacta 47263743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 13072433 - 13072356
Alignment:
Q  95 gaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    ||||||||||| |||||  || ||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  13072433 gaacaaaattataattttgcatgttttggttgaaaaataaaaa-aaatcgaaacatttttaaaatgctacgaaattttg 13072356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 9235688 - 9235635
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtt 247  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| ||||||    
T  9235688 taaagataagcaatgaaagaaatgaacaaacacaccaagattgttgacccagtt 9235635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 5817399 - 5817300
Alignment:
Q  198 gataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||||||| |||| ||||||||||||| | ||||||||| |  ||||| | |||||||||||| | ||| ||||| ||||||| |||||||||||||    
T  5817399 gataagcaatgtaagaaaggaacaaacacaccaaagattgttaactcagttcggtccaatatgacctactct-ggggagagagcagctctccaatccact 5817301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 20606218 - 20606302
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagat 177  Q
    ||||||||||| ||||||  |||||||| ||| |||||||| |||  ||||||||||||||||||  ||||||||||||| ||||    
T  20606218 ggaacaaaattgcaatttcgcacgtttttgttgaaaaataataatcgatcgaaacatctttgaaaacctacgaaattttgcagat 20606302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 2479301 - 2479403
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| || |||||||||| |||  ||||||||| |||||| | | |||||||||| ||||| ||||  ||||||| |||| ||||    
T  2479301 aaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgacccagttcggttcaatatgacctaatctagggg-gagagcagctctcaaatc 2479398  T
Q  293 cacta 297  Q
    |||||    
T  2479399 cacta 2479403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 30814637 - 30814564
Alignment:
Q  201 aagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||||| | |||||  ||||| ||| |||||||    
T  30814637 aagcaatgaaagaaaggaacaaacacaccaaaattgttgacccagttcggtccaacttgacctaatatggggga 30814564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 21639809 - 21639875
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  21639809 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 21639875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 44832474 - 44832525
Alignment:
Q  96 aacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaa 146  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  44832474 aacaaaattgcaatttcgcacgttttggttgaaaaataaaaataaatcgaaa 44832525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 20609531 - 20609602
Alignment:
Q  114 cacgttttggttaaaaataaaaataa---atcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    |||||||| |||||||| ||||||||   ||||||||||||||||||  ||||||||||||| ||||| ||||    
T  20609531 cacgtttttgttaaaaa-aaaaataatcgatcgaaacatctttgaaaacctacgaaattttgcagatcctttt 20609602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 18408730 - 18408827
Alignment:
Q  196 aagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||| |||||| || |||||||||| |||  ||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||    
T  18408730 aagataagcaa-gaaagaaag-aacaaacacaccaaaagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcc 18408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 19992313 - 19992377
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  19992313 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 19992377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 23582561 - 23582646
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatc 178  Q
    ||||||||||| ||||||| || ||||| ||| |||||| ||||||||| ||||  |||||||| |||||| ||| |||| |||||    
T  23582561 ggaacaaaattgcaatttagcaagttttagttgaaaaattaaaataaatagaaatgtctttgaattgctacaaaactttgcagatc 23582646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 24024411 - 24024347
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  24024411 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 24024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 26417509 - 26417445
Alignment:
Q  210 aagagaggaacaaacacatcaag--attgttgatccagtttgatccaatatgaccaaatctgggg 272  Q
    |||||||||||||||||| ||||  |||||||| |||||||| |||||| ||||| || ||||||    
T  26417509 aagagaggaacaaacacaccaagaaattgttgacccagtttggtccaatttgacctaacctgggg 26417445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 27348010 - 27347945
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| ||||||||| |||||| | |||||  ||||| |||||||||||    
T  27348010 aagagaggaacaaacacaccaaagattgttgacccagttcggtccaacttgacctaatctggggga 27347945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 47676111 - 47676176
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| |||||||||||||||| | |||||  ||||| ||| |||||||    
T  47676111 aagagaggaacaaacacaccaaagattgttgatccagttcggtccaacttgacctaatatggggga 47676176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 2057966 - 2058029
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  2057966 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 2058029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 4866731 - 4866794
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  4866731 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 4866794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 32073217 - 32073277
Alignment:
Q  112 aacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaatttt 171  Q
    |||| ||||||||| |||||| ||||| ||| ||||| ||||| |||||||||||||||||    
T  32073217 aacaagttttggttgaaaaattaaaattaattgaaacttctttaaaatgctacgaaatttt 32073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 10693 - 10796
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| |||||| | |||||||||||| ||| ||||||| ||||||| ||||||||||    
T  10693 taaagataagcaatgaaagagaggaacaaacacaccaagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatcc 10792  T
Q  294 acta 297  Q
    ||||    
T  10793 acta 10796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 4696729 - 4696626
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||| |||||||  |||||||||    
T  4696729 taaagataagcaatgaaagaaatgaacaaacacaccaagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatcc 4696630  T
Q  294 acta 297  Q
    ||||    
T  4696629 acta 4696626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 26403363 - 26403260
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||||||||||    
T  26403363 taaagataagcaatgaaaacgaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcc 26403264  T
Q  294 acta 297  Q
    ||||    
T  26403263 acta 26403260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 9765953 - 9765849
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  9765953 taaagataagcaatgaaagaagggaacaaacacaccaatgattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 9765854  T
Q  293 cacta 297  Q
    |||||    
T  9765853 cacta 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 19752524 - 19752424
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| | |||| | |||||||||||| | ||| ||||| ||||||| |||||||||||||    
T  19752524 agataagtaatgaaagagaggaacaaacacaccaagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccact 19752425  T
Q  297 a 297  Q
    |    
T  19752424 a 19752424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 23799707 - 23799607
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||| ||| ||| |||||||  ||||||||||||    
T  23799707 agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccact 23799608  T
Q  297 a 297  Q
    |    
T  23799607 a 23799607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 6127184 - 6127288
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||  ||||| | |||||||||||| ||| ||||| | ||||||| |||||||||    
T  6127184 taaagataagcaatgaaagagatgaacaaacacatcaaatattgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatc 6127283  T
Q  293 cacta 297  Q
    |||||    
T  6127284 cacta 6127288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 4455991 - 4456095
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||| ||| || ||| | ||||||||| || ||||||||||| ||||||| |||||||||    
T  4455991 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgctgacccggttcggtccaatatggcctaatctgggggagagagcagctctccaatc 4456090  T
Q  293 cacta 297  Q
    |||||    
T  4456091 cacta 4456095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 19175888 - 19175784
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| |||||||||||||  ||  ||||||||| | |||| | |||||||||||| ||||||||||| ||||||  |||||||||    
T  19175888 aaagataagcaatgaaagaaaggaacaaacacacaaaaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatc 19175789  T
Q  293 cacta 297  Q
    |||||    
T  19175788 cacta 19175784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 7412304 - 7412408
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaaga---ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||||||||| ||||||||||||| || ||   ||||||| |||||| | |||||||||||| ||| ||||||| ||||||| ||||||||    
T  7412304 aaagataagcaatgaaaga-aggaacaaacacaccatgaaaattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaat 7412402  T
Q  292 ccacta 297  Q
    ||||||    
T  7412403 ccacta 7412408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 15863194 - 15863105
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggttaaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    |||||||||||   |||| ||||||||||||| ||||||||||||||| ||||| ||||| ||||| ||| ||| |||||||||||||||    
T  15863194 ggaacaaaattgttatttcacacgttttggttgaaaataaaaataaattgaaacgtctttaaaatggtaccaaactttgtagatcttttt 15863105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 5702613 - 5702529
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagca 281  Q
    |||||||| ||||| || ||||||||||||| |||||||||||| |||||| | |||||||||||| ||| ||||||| ||||||    
T  5702613 agataagctatgaaggaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatatgggggagagagca 5702529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 29351955 - 29352045
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||||| ||||||  |||||||||||| ||||||||||| ||||  |||| ||||||||||||||||||| |||| |||| |||||    
T  29351955 ggaacaaaattgcaatttcgcacgttttggttgaaaaataaaaacaaattaaaacgtctttgaaatgctacgaaaatttgcagattttttt 29352045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 32540051 - 32539961
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||||| |||||| ||| ||||||||| |||||||||||||||| ||||| |||| ||||||||| |||| |||| ||||| ||||    
T  32540051 ggaacaaaatttcaattttacatgttttggttgaaaaataaaaataaattgaaacgtcttcgaaatgctatgaaactttggagatcctttt 32539961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 31071326 - 31071259
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| | |||| | |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  31071326 aagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacta 31071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 32750499 - 32750577
Alignment:
Q  95 gaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    |||||||||| |||||  |  |||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  32750499 gaacaaaattgcaattgcatgcgttttggttgaaaaataaaaataaaccgaaacgtctttgaaatgctacgaaactttg 32750577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 1262050 - 1261984
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  1262050 aagattgttgacccagttcaa-ccaatatgacctaatctgggggagagagcagctctccaatccacta 1261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 6813646 - 6813747
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||| ||||||||| ||||||||||| | | ||||||||| | |||||| | |||||||| ||| |  || ||||| ||||||| |||||||||    
T  6813646 taaagataagaaatgaaagaaaggaacaaacataccaaagattgttaacccagttcggtccaatataacctacactaggggagagagcagctctccaatc 6813745  T
Q  293 ca 294  Q
    ||    
T  6813746 ca 6813747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 33352343 - 33352278
Alignment:
Q  210 aagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||||  ||||| |||||||||||    
T  33352343 aagagaggaacaaacacatcaaagattgttgacccagttcggtccaacttgacctaatctggggga 33352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 18870658 - 18870595
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  |||||||||| || ||||||||||| ||||||| |||||||||||    
T  18870658 aagattgttgacccagttc-atccaatatggcctaatctgggggagagagcagctctccaatcca 18870595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 26287902 - 26287968
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  26287902 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 26287968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 26301159 - 26301225
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  26301159 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 26301225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 26313153 - 26313219
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  26313153 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 26313219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 40401057 - 40400990
Alignment:
Q  117 gttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||| |||||||||||||||||||||| ||||  ||||| || |||| ||||||||| |||||    
T  40401057 gttttggttgaaaaataaaaataaatcgaaacgtcttcaaaatgatatgaaactttgtagatattttt 40400990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 5689461 - 5689399
Alignment:
Q  213 agaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||| |||||||||||||| ||||||||| |||||| | |||||  |||||||||||||||||    
T  5689461 agagaaacaaacacatcaaagattgttgacccagttcggtccaacttgaccaaatctggggga 5689399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 29892126 - 29892052
Alignment:
Q  96 aacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    ||||||||| ||||||  |||||||||||| |||||||||||  |||  |||||||||||||||||||| ||||||||    
T  29892126 aacaaaattgcaatttcgcacgttttggttgaaaaataaaaa--aatt-aaacatctttgaaatgctacaaaattttg 29892052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 379017 - 379090
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggttaaaaataaaaataaatcgaaacatctttgaaatgctacgaaa 167  Q
    ||||||||| | ||||||  |||||||||||| ||||| ||||||||| |||||  ||| ||||||||| ||||    
T  379017 ggaacaaaaattcaattttgcacgttttggttcaaaattaaaataaattgaaacgacttcgaaatgctatgaaa 379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 15212979 - 15212914
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| ||||||||| |||||| | |||||  ||||| |||||||||||    
T  15212979 aagagaggaacaaacacaccaaagattgttgacccagttcggtccaacttgacctaatctggggga 15212914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 39784907 - 39784843
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  39784907 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 39784843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 6311298 - 6311361
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  6311298 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 6311361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 7290010 - 7289947
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  7290010 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 7289947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 10689239 - 10689176
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  10689239 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 10689176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 18853264 - 18853201
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  18853264 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 18853201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 25328362 - 25328299
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  25328362 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 25328299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 33037902 - 33037839
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  33037902 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 33037839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 36979378 - 36979441
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  36979378 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 36979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 39245958 - 39246061
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  39245958 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 39246057  T
Q  294 acta 297  Q
    ||||    
T  39246058 acta 39246061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 38152571 - 38152469
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||  ||||||||||| ||||||| |||||||||||    
T  38152571 aaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatcca 38152472  T
Q  295 cta 297  Q
    |||    
T  38152471 cta 38152469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 10047343 - 10047446
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  10047343 taaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 10047442  T
Q  294 acta 297  Q
    ||||    
T  10047443 acta 10047446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 36315359 - 36315259
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||||||    
T  36315359 agataaacaatgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccact 36315260  T
Q  297 a 297  Q
    |    
T  36315259 a 36315259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 36329568 - 36329468
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||||||    
T  36329568 agataaacaatgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccact 36329469  T
Q  297 a 297  Q
    |    
T  36329468 a 36329468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 5269324 - 5269221
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||| ||||| ||||||||| ||||||||||||| |||||||||||| | |||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  5269324 taaatataagaaatgaaagaaaggaacaaacacaacaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 5269225  T
Q  294 acta 297  Q
    ||||    
T  5269224 acta 5269221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 16623426 - 16623323
Alignment:
Q  195 aaagataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||| |||||| | | |||||||||| ||||||| ||| ||||||| ||||||||||    
T  16623426 aaagataagcaatgaaagaaaaggaacaaacacaccaagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatcc 16623327  T
Q  294 acta 297  Q
    ||||    
T  16623326 acta 16623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 24333773 - 24333876
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| || |||||||||| |||||||||| |  ||||| | |||||||||||| ||| ||||||| ||||||| ||||||||||    
T  24333773 taaagataagcaatgaaagaaagaaacaaacacaccaagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatcc 24333872  T
Q  294 acta 297  Q
    ||||    
T  24333873 acta 24333876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 5396805 - 5396701
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||| ||||||| |||  ||||||||| |||||| | |||||||||||| ||||||| ||| ||||||| |||||||||    
T  5396805 aaagataagcaatgaaagaaaggaagaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatc 5396706  T
Q  293 cacta 297  Q
    |||||    
T  5396705 cacta 5396701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 3796653 - 3796549
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||   |||||||||||| ||| ||||||| ||||||  |||| ||||    
T  3796653 taaagataagcaatgaaagagaggaacaaacacaccaaagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatc 3796554  T
Q  293 cacta 297  Q
    |||||    
T  3796553 cacta 3796549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 5143226 - 5143326
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||||||||||||| |||||||||||||   |||||||||| | |||| | |||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  5143226 agataagcaatgaaagaaaggaacaaacacactgagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccact 5143325  T
Q  297 a 297  Q
    |    
T  5143326 a 5143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 3777514 - 3777616
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||| |||||| | |||||||| ||| ||||| | ||| |||| || |||||||||||    
T  3777514 aaagataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatcca 3777613  T
Q  295 cta 297  Q
    |||    
T  3777614 cta 3777616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 54867148 - 54867226
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggg 272  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| | |||||||    
T  54867148 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctagtctgggg 54867226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 5147644 - 5147741
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| |||||| | |||||||||||| ||| |||||||  |||||| |||||| ||||    
T  5147644 agataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtcca 5147741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 25862155 - 25862052
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||  ||||| | |||||||||||| ||| ||||| | ||||| |  |||||||||    
T  25862155 taaagataagcaatgaaagaaaggaataaacacaccaagattgttgactcagttcggtccaatatgacctaatatggggaagagagcggccctccaatcc 25862056  T
Q  294 acta 297  Q
    ||||    
T  25862055 acta 25862052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 16630813 - 16630710
Alignment:
Q  195 aaagataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||| | |||| | |||||||||||  ||||||| ||| ||| ||| ||||||||||    
T  16630813 aaagataagcaatgaaagaaaaggaacaaacacaccaaggttgttgacctagttcggtccaatatgacataatctggaggagagaacagctctccaatcc 16630714  T
Q  294 acta 297  Q
    ||||    
T  16630713 acta 16630710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 13502193 - 13502103
Alignment:
Q  92 ttggaacaaaattacaatttaacacgttttggttaaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatctttt 182  Q
    ||||||||||||| ||||||  ||||||||| || ||||  ||| |||||  ||||||||||||||||||| |||| ||||||||||||||    
T  13502193 ttggaacaaaattgcaattttgcacgttttgattgaaaaataaagtaaattaaaacatctttgaaatgctatgaaactttgtagatctttt 13502103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 42599707 - 42599622
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagag 279  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||   |||||||||||  ||| ||||||| ||||    
T  42599707 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcagtccaatatgacataatatgggggagagag 42599622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 6743544 - 6743445
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||| |||| |||| ||||||||||||| |||||| ||||| |||||| | |||||||||||| |||||  |||| |||||||  ||||||||||||    
T  6743544 agataagaaatggaagaaaggaacaaacacaccaagat-gttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccact 6743446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 8689617 - 8689536
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    ||||||||||||||||||| || |||||||||| |||  |||||||||||||||| | |||||||||| | ||| |||||||    
T  8689617 aaagataagcaatgaaagaaagtaacaaacacaccaaaagattgttgatccagttcggtccaatatgatctaatatggggga 8689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 29134204 - 29134138
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatg 159  Q
    ||||||||||| |||||| | ||||||||||| |||||||||||||||| |||||||||| ||||||    
T  29134204 ggaacaaaatttcaattttaaacgttttggttgaaaaataaaaataaattgaaacatcttcgaaatg 29134138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 31985766 - 31985664
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||| ||||| || ||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||| ||||| ||||||| ||||||||    
T  31985766 taaagataagcaa-gaaag-gaagaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatct-ggggagagagcagctctccaat 31985670  T
Q  292 ccacta 297  Q
    ||||||    
T  31985669 ccacta 31985664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 20629077 - 20629010
Alignment:
Q  117 gttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||| ||||||||||||| || |||||||||| ||||||||| |||| |||| ||||||||||    
T  20629077 gttttggttgaaaaataaaaatagatagaaacatcttcgaaatgctatgaaactttgcagatcttttt 20629010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 28468659 - 28468559
Alignment:
Q  196 aagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||| ||||| || ||||||||||| |||  ||||||||| ||||||  | ||||||||||| ||||||| ||| ||||||| ||||||||||    
T  28468659 aagataagcaa-gaaag-gaagaacaaacacaccaaaagattgttgacccagttc-agccaatatgacctaatctggaggagagagcagctctccaatcc 28468563  T
Q  294 acta 297  Q
    ||||    
T  28468562 acta 28468559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 18709164 - 18709227
Alignment:
Q  234 ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||| |||||| | |||||| ||||| | ||||||||| |||||||| |||||||||||||    
T  18709164 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagtcctccaatccacta 18709227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 22782738 - 22782801
Alignment:
Q  234 ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||||||||| | |||||| ||||| | ||||||||| |||||||  |||||||||||||    
T  22782738 ttgttgatccagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 22782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 4038278 - 4038204
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggttaa-aaataaaaataaatcgaaacatctttgaaatgctacgaaa 167  Q
    ||||||||||| |||||  ||| ||||||||| | ||||||||||||||  |||||||||| ||||| |||||||    
T  4038278 ggaacaaaattgcaattccacaagttttggttgagaaataaaaataaattaaaacatctttaaaatgatacgaaa 4038204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 28876888 - 28876814
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaa 167  Q
    ||||||||||| ||||||  |||||||||||| |||||| |||||||||  ||||  ||||||||||||| ||||    
T  28876888 ggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgactttgaaatgctatgaaa 28876814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 39774381 - 39774335
Alignment:
Q  251 tccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  39774381 tccaatatgacctactctgggggatagagcagctctccaatccacta 39774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 3814024 - 3814088
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  3814024 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 3814088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 5429872 - 5429807
Alignment:
Q  210 aagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||||  | ||| |||||||||||    
T  5429872 aagagaggaacaaacacatcaaagattgttgacccagttcggtccaacttaacctaatctggggga 5429807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 5732665 - 5732729
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  5732665 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 5732729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12739525 - 12739590
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| ||||||||| |||||| | |||||  ||||| |||||||||||    
T  12739525 aagagaggaacaaacacaccaaagattgttgacccagttcggtccaacttgacctaatctggggga 12739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 18855727 - 18855791
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  18855727 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 18855791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 26175611 - 26175676
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| ||||||||| |||||| | |||||  ||||| |||||||||||    
T  26175611 aagagaggaacaaacacaccaaagattgttgacccagttcggtccaacttgacctaatctggggga 26175676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 34570389 - 34570454
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||  | ||| |||||||||||    
T  34570389 aagagaggaacaaacacaccaaagattgttgacccagttcgatccaacttaacctaatctggggga 34570454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 9224491 - 9224428
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  9224491 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 9224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 24741941 - 24742004
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  24741941 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 24742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 29760642 - 29760705
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  29760642 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 29760705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 56146795 - 56146732
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||| |||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  56146795 aagattgttggtccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 56146732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 1417613 - 1417510
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||   |||||||||    
T  1417613 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatcc 1417514  T
Q  294 acta 297  Q
    ||||    
T  1417513 acta 1417510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 21711190 - 21711290
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||| ||||||||    
T  21711190 agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccact 21711289  T
Q  297 a 297  Q
    |    
T  21711290 a 21711290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 3716125 - 3716022
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| ||||| || || ||||||| |||||||||     
T  3716125 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatct 3716026  T
Q  294 acta 297  Q
    ||||    
T  3716025 acta 3716022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 8370610 - 8370506
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  8370610 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 8370511  T
Q  293 cacta 297  Q
    |||||    
T  8370510 cacta 8370506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 6794833 - 6794733
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| || ||| | |||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  6794833 agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccggttaggtccaatatgacctaatatgggggagagagcagctctccaatccact 6794734  T
Q  297 a 297  Q
    |    
T  6794733 a 6794733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 1736428 - 1736325
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||| ||||||||||||||| ||||||||||||| ||| |||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  1736428 taaacataagcaatgaaagaaaggaacaaacacaccaatattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 1736329  T
Q  294 acta 297  Q
    ||||    
T  1736328 acta 1736325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 18553006 - 18552903
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||||||| ||||||||| ||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  18553006 taaagataatcaatgaaagaaaggaacaaatacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 18552907  T
Q  294 acta 297  Q
    ||||    
T  18552906 acta 18552903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 36029057 - 36029160
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||| ||||||   |||||||||||| ||||||||||| | ||||| ||||||||||    
T  36029057 taaagataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatcc 36029156  T
Q  294 acta 297  Q
    ||||    
T  36029157 acta 36029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 33386790 - 33386686
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||||||||||||| || |||||||||| |||  |||||||||||||||| | |||||||||||| ||||||||||| ||||||| ||||||||    
T  33386790 taaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaat 33386692  T
Q  292 ccacta 297  Q
    ||||||    
T  33386691 ccacta 33386686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 27975075 - 27974972
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  27975075 aaagataagcaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 27974977  T
Q  293 cacta 297  Q
    |||||    
T  27974976 cacta 27974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 30709914 - 30709810
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| |||||||  ||||||||    
T  30709914 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 30709815  T
Q  293 cacta 297  Q
    |||||    
T  30709814 cacta 30709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 3328479 - 3328376
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||   |||||||||||| ||||| | ||| |||||||  || ||||||    
T  3328479 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcattccaatatgacctaatctagaggagagagcagcccttcaatcc 3328380  T
Q  294 acta 297  Q
    ||||    
T  3328379 acta 3328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 26298952 - 26299055
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| | | |||||||||  ||||||||||| |||||||  ||||||||     
T  26298952 taaagataagcaacgaaagagaggaacaaacacaccaagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatct 26299051  T
Q  294 acta 297  Q
    ||||    
T  26299052 acta 26299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 37466255 - 37466358
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||||||| |||| ||  |||||||||    
T  37466255 taaagataagcaatgaaagaaatgaacaaacacaccaagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatcc 37466354  T
Q  294 acta 297  Q
    ||||    
T  37466355 acta 37466358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 48438178 - 48438281
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    ||||||||| |||||| ||| ||||||||||||| ||||||| |||| | |||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  48438178 taaagataaacaatgacagaaaggaacaaacacaccaagattattgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 48438277  T
Q  294 acta 297  Q
    ||||    
T  48438278 acta 48438281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 27452922 - 27453025
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||| |||||| ||||||||||||| |||  |||||||||||||||| | |||||||||||| |||| |||||| ||||||| ||||||||    
T  27452922 taaagataagcaa-gaaaga-aggaacaaacacaccaaaagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaat 27453019  T
Q  292 ccacta 297  Q
    ||||||    
T  27453020 ccacta 27453025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 4387051 - 4386950
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| | |||||||  | || ||||||| | ||||||||| ||||||| |||||||||    
T  4387051 taaagataagcaatgaaagaaaggaacaaacacatcaaagattgtttacccagtttagttcagtatgacctactctgggggagagagcagctctccaatc 4386952  T
Q  293 ca 294  Q
    ||    
T  4386951 ca 4386950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 16264313 - 16264417
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||| |||||||||| |||||||||||||  ||  ||||||||| | |||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  16264313 aaagataaacaatgaaagaaaggaacaaacacacaaaaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 16264412  T
Q  293 cacta 297  Q
    |||||    
T  16264413 cacta 16264417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 40592903 - 40592802
Alignment:
Q  197 agataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccac 295  Q
    ||||||||||||||||| | |||||||||||| |||||||||||| |||||| | |||||||||||| |||||| |||| |||| || ||||||||| ||    
T  40592903 agataagcaatgaaagaaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgac 40592804  T
Q  296 ta 297  Q
    ||    
T  40592803 ta 40592802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 25795744 - 25795848
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||| ||||||||||||||| | ||||||||||| ||| ||||||||| | |||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  25795744 taaaaataagcaatgaaagaaatgaacaaacacaccaaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 25795843  T
Q  293 cacta 297  Q
     ||||    
T  25795844 tacta 25795848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 40844616 - 40844718
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| | |||| |||||| ||||||||||||| ||||| | |||||||||||| ||||| ||||| |||||||  ||| |||||    
T  40844616 taaagataagcaatgaaagaaatgaacgaacacaccaagattgttgattcagttcggtccaatatgacctaatct-ggggagagagcagccctcaaatcc 40844714  T
Q  294 acta 297  Q
    ||||    
T  40844715 acta 40844718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 27986569 - 27986466
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||| |||||| | ||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||||||||    
T  27986569 taaagataagcaa-gaaaga-atgaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaat 27986472  T
Q  292 ccacta 297  Q
    ||||||    
T  27986471 ccacta 27986466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 39040116 - 39040012
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatc--aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |  ||||||||||| | |||| | |||||||||||| ||||||||| | ||| ||  |||||||||    
T  39040116 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatc 39040017  T
Q  293 cacta 297  Q
    |||||    
T  39040016 cacta 39040012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 8257436 - 8257515
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    ||||||||||| ||||||  |||||||||||| |||||||||||||||| ||||| |||||||||||||| |||| ||||    
T  8257436 ggaacaaaatttcaattttgcacgttttggttgaaaaataaaaataaattgaaacgtctttgaaatgctatgaaactttg 8257515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 32143285 - 32143388
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||| ||||| || ||||||||||| |||  ||||||||| | |||| | |||||||||||| ||||||||||| ||||||| ||||||||    
T  32143285 taaagataagcaa-gaaag-gaagaacaaacacaccaaaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaat 32143382  T
Q  292 ccacta 297  Q
    ||||||    
T  32143383 ccacta 32143388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 29813256 - 29813191
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctggggga 274  Q
    |||||||||||||||||||||| ||||||||| |||||| | ||||| ||||||||||||||||||    
T  29813256 aagagaggaacaaacacatcaaagattgttgacccagttcggtccaacatgaccaaatctggggga 29813191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 47924006 - 47923941
Alignment:
Q  217 gaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcag 282  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||| ||||| ||||| |||||||    
T  47924006 gaacaaacacaccaagattgttgacccagttcgatccaatatgacctaatctaggggagagagcag 47923941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 24695287 - 24695200
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagca 281  Q
    ||||||||| |||||||||| | ||||||||||| |||||||||||| | |||| | |||||||||||| |||||  |||| ||||||    
T  24695287 taaagataaacaatgaaagaaatgaacaaacacaccaagattgttgacctagttcggtccaatatgacctaatctacgggagagagca 24695200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 3159384 - 3159294
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||||| ||||||  ||| |||||||| |||||||||||||||| ||||| ||||  |||||||| |||| |||||||||| ||||    
T  3159384 ggaacaaaatttcaattttgcacattttggttgaaaaataaaaataaattgaaacgtcttcaaaatgctatgaaaatttgtagatcgtttt 3159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 16094725 - 16094637
Alignment:
Q  96 aacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||| | ||||||  ||| |||||||| |||||||||||||||| ||||| ||||||||||||||| ||| |||| ||||| ||||    
T  16094725 aacaaaagtgcaatttcgcacattttggttgaaaaataaaaataaattgaaacttctttgaaatgctacaaaactttgcagatcctttt 16094637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 35937825 - 35937884
Alignment:
Q  100 aaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaat 158  Q
    ||||| |||||| |||| |||||||| |||||||||||||||| ||||||||||||||||    
T  35937825 aaattgcaatttcacacattttggttgaaaaataaaaataaattgaaacatctttgaaat 35937884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 5236432 - 5236495
Alignment:
Q  210 aagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggg 272  Q
    |||||||||||||||||| ||| ||||||||| |||||||| |||||  ||||| |||||||||    
T  5236432 aagagaggaacaaacacaccaaagattgttgacccagtttggtccaaattgacctaatctgggg 5236495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 26928687 - 26928621
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | ||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  26928687 aagattgttgacccagttc-agccaatatgacctaatctgggggagagagcaactctccaatccacta 26928621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 35925446 - 35925547
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatc--aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||| |||||||||||| | ||||||||||| |  ||||||||||| | |||| | |||||||||||| ||| |||| |   | ||||||||||||||    
T  35925446 aaagatgagcaatgaaagaaaagaacaaacacaccaaaagattgttgacctagttcggtccaatatgacctaatttgggag---gggcagttctccaatc 35925542  T
Q  293 cacta 297  Q
    |||||    
T  35925543 cacta 35925547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 219178 - 219093
Alignment:
Q  98 caaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||| ||||||  |||||||||||| ||||||||||| | || ||||||| ||||||||||||| || ||||| ||||| ||||    
T  219178 caaaattgcaatttcgcacgttttggttgaaaaataaaaa-atatggaaacatttttgaaatgctacaaatttttgcagatcctttt 219093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 18656435 - 18656499
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  18656435 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 18656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 2671682 - 2671619
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  2671682 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 2671619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 7167245 - 7167308
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  7167245 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 7167308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 8477363 - 8477426
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  8477363 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 8477426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 8739159 - 8739096
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  8739159 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 8739096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 9091397 - 9091334
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  9091397 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 9091334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 22173279 - 22173216
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  22173279 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 22173216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 40372891 - 40372828
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  40372891 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 40372828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 47701669 - 47701717
Alignment:
Q  234 ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcag 282  Q
    |||||||||||||| |||||||  ||||| ||||||||||| |||||||    
T  47701669 ttgttgatccagttcgatccaaattgacctaatctgggggagagagcag 47701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 775636 - 775739
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| || | |||||||||||| ||||||||||| |||| || ||||||||||    
T  775636 taaagataagcaatgaaagaaaggaacaaacacatcaagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatcc 775735  T
Q  294 acta 297  Q
    ||||    
T  775736 acta 775739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 47704069 - 47703966
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||||||||||    
T  47704069 taaagataagcaatgaaagaaaggaaaaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcc 47703970  T
Q  294 acta 297  Q
    ||||    
T  47703969 acta 47703966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 19072891 - 19072995
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  19072891 taaagataagcaatgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 19072990  T
Q  293 cacta 297  Q
    |||||    
T  19072991 cacta 19072995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 19120781 - 19120885
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  19120781 taaagataagcaatgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 19120880  T
Q  293 cacta 297  Q
    |||||    
T  19120881 cacta 19120885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 32889402 - 32889506
Alignment:
Q  194 taaagataagcaatgaaa-gagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||| | |||||||||||| | ||||||||| ||||||| |||||||||    
T  32889402 taaagataagcaatgaaaagagaggaacaaacacaccaagattgttgatctagttcggtccaatatgacctagtctgggggatagagcagctctccaatc 32889501  T
Q  293 cacta 297  Q
    |||||    
T  32889502 cacta 32889506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 13598362 - 13598465
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  || ||||||    
T  13598362 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatcc 13598461  T
Q  294 acta 297  Q
    ||||    
T  13598462 acta 13598465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 29651775 - 29651878
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  29651775 taaagataagcaatgaaagaaaggaacaaacacaccaagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatcc 29651874  T
Q  294 acta 297  Q
    ||||    
T  29651875 acta 29651878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 47098957 - 47098854
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  47098957 taaagataagcaatcaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatcc 47098858  T
Q  294 acta 297  Q
    ||||    
T  47098857 acta 47098854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 9476226 - 9476328
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||| ||||| ||||||| |||||||||||    
T  9476226 aaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatcca 9476325  T
Q  295 cta 297  Q
    |||    
T  9476326 cta 9476328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 3281671 - 3281773
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| |||||||||||||||||  |||| |||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  3281671 aaagataagcaatgaaagaaaggaacaaacacatcaaaagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 3281770  T
Q  293 cac 295  Q
    |||    
T  3281771 cac 3281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 27104505 - 27104402
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||  ||||| | |||||||| ||| ||||||||||| ||||||| ||||||||||    
T  27104505 taaagataagcaatgaaataaaggaacaaacacaccaagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatcc 27104406  T
Q  294 acta 297  Q
    ||||    
T  27104405 acta 27104402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 26645031 - 26644930
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  26645031 aaagataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 26644932  T
Q  293 ca 294  Q
    ||    
T  26644931 ca 26644930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 16124650 - 16124546
Alignment:
Q  194 taaagataagcaatgaaagaga-ggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||| |||||||| | |||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||||||| |||||||  ||||||||    
T  16124650 taaagataagctatgaaagaaaaggaacaaacacaccaagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatc 16124551  T
Q  293 cacta 297  Q
    |||||    
T  16124550 cacta 16124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 47102974 - 47102871
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||| ||||| ||||||||||||| ||| |||||||| |||||| | |||||||||||| ||||| ||||| |||||||   ||||||||    
T  47102974 taaagataagcaatcaaagaaaggaacaaacacaccaaaattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccatccaatcc 47102875  T
Q  294 acta 297  Q
    ||||    
T  47102874 acta 47102871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 13604757 - 13604653
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||| ||||||||| ||||||||||||| |||  ||||||||| |||||| | | |||||||||| ||| ||||||| ||||||| ||||||||    
T  13604757 taaagataagtaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaat 13604659  T
Q  292 ccacta 297  Q
    ||||||    
T  13604658 ccacta 13604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 42412446 - 42412536
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggttaaaaa-taaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatcttttt 183  Q
    ||||||||||| |||||| ||||||||||||| |||| |||||||||||| |||||||||  |||||||| |||| |||| ||||||||||    
T  42412446 ggaacaaaattgcaattttacacgttttggttgaaaactaaaaataaatcaaaacatcttcaaaatgctatgaaactttgcagatcttttt 42412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 21536703 - 21536599
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||| |||||||| ||||||||||||| |||  ||||||||| |||||| | |  || |||||| ||||||||||| ||||||| |||||||||    
T  21536703 aaagataagcgatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtaaaaaatgacctaatctgggggagagagcagctctccaatc 21536604  T
Q  293 cacta 297  Q
    |||||    
T  21536603 cacta 21536599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 37069733 - 37069837
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||| |||| | ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||  ||||| |||    
T  37069733 aaagataagcaacgaaataaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatc 37069832  T
Q  293 cacta 297  Q
    |||||    
T  37069833 cacta 37069837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 17744725 - 17744796
Alignment:
Q  101 aattacaatttaacacgttttggttaaaa-ataaaaataaatcgaaacatctttgaaatgctacgaaatttt 171  Q
    |||| ||||||  |||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  17744725 aattgcaatttcgcacgttttggctaaaaaataaaaataaatcgaaaaatctttgaaatgctatgaaatttt 17744796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 19358974 - 19358873
Alignment:
Q  196 aagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||  |||| || |||||||||||||||  ||||||||| ||||||   || ||||||||| ||| ||||||| ||||||| ||||||||||    
T  19358974 aagataagcaagaaaag-gaagaacaaacacatcaaaagattgttgacccagttcagtc-aatatgacctaatatgggggagagagcagctctccaatcc 19358877  T
Q  294 acta 297  Q
    ||||    
T  19358876 acta 19358873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 24202865 - 24202799
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  24202865 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 24202799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 25445174 - 25445110
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  25445174 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 25445110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 39445500 - 39445564
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  39445500 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 39445564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 44023958 - 44023894
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  44023958 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 44023894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 17345652 - 17345549
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacat-caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| | ||||||| ||||  |||||| || | |||||| | || ||||||||| | ||| ||||| |||| || |||||||||    
T  17345652 taaagataagcaatgaaagaaatgaacaaaaacataaaagattattaacccagttcggtctaatatgacctactct-ggggaaagaggagctctccaatc 17345554  T
Q  293 cacta 297  Q
    |||||    
T  17345553 cacta 17345549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 19361506 - 19361462
Alignment:
Q  253 caatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  19361506 caatatgacctaatatgggggagagagcagctctccaatccacta 19361462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 19380146 - 19380102
Alignment:
Q  253 caatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    |||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  19380146 caatatgacctaatatgggggagagagcagctctccaatccacta 19380102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 17004092 - 17003990
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||| |||||||    
T  17004092 aaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatcca 17003993  T
Q  295 cta 297  Q
    |||    
T  17003992 cta 17003990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 42127543 - 42127440
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| |||| ||||||||| ||||||||||| |||||||  | |||||||    
T  42127543 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatcc 42127444  T
Q  294 acta 297  Q
    ||||    
T  42127443 acta 42127440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 11917105 - 11917002
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||| ||| ||||||||||||| | |||||||||| |||||| | |||||||||||| ||| ||||||| ||||||| ||||||||||    
T  11917105 taaagataagcaatgagagaaaggaacaaacacaccgagattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatcc 11917006  T
Q  294 acta 297  Q
    ||||    
T  11917005 acta 11917002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 31300729 - 31300626
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| | |||| |||| |||| |  ||||||||||    
T  31300729 taaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctagtctgagggagagagaaactctccaatcc 31300630  T
Q  294 acta 297  Q
    ||||    
T  31300629 acta 31300626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 9353465 - 9353362
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  9353465 aaagataagcaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 9353367  T
Q  293 cacta 297  Q
    |||||    
T  9353366 cacta 9353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 24553639 - 24553551
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcag 282  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||| |||||  |||| |||||||    
T  24553639 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgatccagttcggtccaatatgacctaatctatgggagagagcag 24553551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 28832223 - 28832326
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| |  |||||||||| |||||||||||| || ||| | |||||||||||| ||||||||||| |||||||  |||||||||    
T  28832223 taaagataagcaatgaaagaaacaaacaaacacaccaagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatcc 28832322  T
Q  294 acta 297  Q
    ||||    
T  28832323 acta 28832326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 36932483 - 36932380
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||| | ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  36932483 aaagataagcaatgaaaaa-aggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 36932385  T
Q  293 cacta 297  Q
    |||||    
T  36932384 cacta 36932380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 3880264 - 3880366
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||   |||||||||||| |||||| || | ||||||| ||||||||||    
T  3880264 taaagataagcaatgaaagaaaggaacaa-cacaccaagattgttgattcagttctgtccaatatgacctaatctgaggcagagagcagctctccaatcc 3880362  T
Q  294 acta 297  Q
    ||||    
T  3880363 acta 3880366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 15464495 - 15464599
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||||||||||||| || |||||||||| |||  ||||||||| |||||| | |||||||||| | ||||||||||| ||||||| ||||||||    
T  15464495 taaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaat 15464593  T
Q  292 ccacta 297  Q
    ||||||    
T  15464594 ccacta 15464599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 10281722 - 10281818
Alignment:
Q  202 agcaatgaaagagaggaacaaacacatcaa-gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||| |||||| ||||||||||||| ||| ||||||||| |||||| | ||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  10281722 agcaaagaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccacta 10281818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 19588710 - 19588813
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||| |||||| | |||||||||| | |||||  |||| |||||||  |||||||||    
T  19588710 taaagataagcaatgaaagaaaggaacaaacactcaaagattgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatcc 19588809  T
Q  294 acta 297  Q
    ||||    
T  19588810 acta 19588813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 12084309 - 12084205
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagat--tgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| ||| ||  |||||| |||||| | |||| ||||||| ||| ||||| | ||||||| |||||||||    
T  12084309 aaagataagcaatgaaagaaaggaacaaacacaccaaaatattgttgacccagttcggtccactatgacctaatatggggcagagagcagctctccaatc 12084210  T
Q  293 cacta 297  Q
    |||||    
T  12084209 cacta 12084205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 14520193 - 14520297
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||| ||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||| ||||  ||||||| ||| |||||    
T  14520193 aaagataagcactgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatc 14520292  T
Q  293 cacta 297  Q
    |||||    
T  14520293 cacta 14520297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 30922502 - 30922425
Alignment:
Q  95 gaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaatttt 171  Q
    |||||||||| |||||| ||| ||||||||| |||||||||||||||| ||||||| ||||||||  |||||||||||    
T  30922502 gaacaaaattgcaatttcacatgttttggttgaaaaataaaaataaatagaaacatatttgaaattgtacgaaatttt 30922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 8788413 - 8788491
Alignment:
Q  96 aacaaaattacaatttaacacgttttggtt-aaaaataaa-aataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    ||||||||| | ||||  ||| |||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  8788413 aacaaaattgccattttgcacattttggtttaaaaataaagaaaaaatcgaaacatctttgaaatgttacgaaattttg 8788491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 15959519 - 15959445
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaa 167  Q
    ||||||||||| ||||||  |||||||||||| |||||| |||||||||  ||||| ||||||||||||| ||||    
T  15959519 ggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacaactttgaaatgctatgaaa 15959445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 6741815 - 6741916
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| | ||||||||||| | |||||| || |  ||||| | | |||||||||  | ||||||||| ||||||| |||||||||    
T  6741815 taaagataagcaatgaaagaaatgaacaaacacaccaaagattattaacacagttcggttcaatatgacatactctgggggatagagcagctctccaatc 6741914  T
Q  293 ca 294  Q
    ||    
T  6741915 ca 6741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 33031075 - 33030970
Alignment:
Q  194 taaagataagcaatgaaag-agaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||| ||||||||  | ||||||||||||||| ||||||||| || ||||| | || ||||||||  | ||||||||| ||||||| ||||||||    
T  33031075 taaagataaccaatgaaaataaaggaacaaacacatcaaagattgttaattcagttcggtcaaatatgacatactctgggggagagagcagctctccaat 33030976  T
Q  292 ccacta 297  Q
     |||||    
T  33030975 tcacta 33030970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 4410301 - 4410238
Alignment:
Q  234 ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||| |||||| | |||||| ||||| | ||||||||| ||||||| ||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagctctccaatccacta 4410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 38192174 - 38192240
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  38192174 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 38192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 38219399 - 38219465
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  38219399 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 38219465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 31501292 - 31501218
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaa 167  Q
    ||||||||||| ||||||  |||||||||||| |||||| |||||||||  ||||| ||| ||||||||| ||||    
T  31501292 ggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacaacttcgaaatgctatgaaa 31501218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 38747213 - 38747152
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaa 255  Q
    |||||||||||||| ||||| |||||||||  || ||||||| |||| |||||||| |||||    
T  38747213 taaagataagcaattaaagaaaggaacaaatccaccaagattattgacccagtttggtccaa 38747152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 11181965 - 11181925
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagat 234  Q
    |||||||||||||||||||| | ||||||||||| ||||||    
T  11181965 taaagataagcaatgaaagaaatgaacaaacacaccaagat 11181925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 31180215 - 31180278
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  31180215 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 31180278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 43592280 - 43592343
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  43592280 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 43592343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 43598725 - 43598788
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||| |||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  43598725 aagattgttggtccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 43598788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 43604217 - 43604280
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||| |||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  43604217 aagattgttggtccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 43604280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 43609709 - 43609772
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||| |||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  43609709 aagattgttggtccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 43609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 2456 - 2559
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| | |||||  |||||||||    
T  2456 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatcc 2555  T
Q  294 acta 297  Q
    ||||    
T  2556 acta 2559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 5647 - 5750
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||| |||||||  || ||||||    
T  5647 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatcc 5746  T
Q  294 acta 297  Q
    ||||    
T  5747 acta 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 133414 - 133310
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||| ||||||||| ||||||||||||| |||  ||||||||| |||||| | | |||||||||| ||| ||||||| ||||||| ||||||||    
T  133414 taaagataagtaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttaggttcaatatgacctaatatgggggagagagcagctctccaat 133316  T
Q  292 ccacta 297  Q
    ||||||    
T  133315 ccacta 133310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 10077298 - 10077195
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||| || | |||||||||||| ||||||||||| |||||||  |||||||||    
T  10077298 taaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatcc 10077199  T
Q  294 acta 297  Q
    ||||    
T  10077198 acta 10077195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 31979477 - 31979580
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| |||||| | |||||||||||  ||||||||||| |||||||  |||||||||    
T  31979477 taaagataagcaatgaaatagaggaacaaacacaccaagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatcc 31979576  T
Q  294 acta 297  Q
    ||||    
T  31979577 acta 31979580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 31936551 - 31936654
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| | |||| | |||||||||||| | |||||| || ||||||| ||||||||||    
T  31936551 taaagataagcaatgaaagataggaacaaacacaccaagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatcc 31936650  T
Q  294 acta 297  Q
    ||||    
T  31936651 acta 31936654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 5757611 - 5757508
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| |||||||||    
T  5757611 aaagataagcaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatc 5757513  T
Q  293 cacta 297  Q
    |||||    
T  5757512 cacta 5757508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 31086605 - 31086503
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||   |||||||||| | ||||| ||||| ||||||  |||||||||||    
T  31086605 aaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatcca 31086506  T
Q  295 cta 297  Q
    |||    
T  31086505 cta 31086503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 4629917 - 4630021
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatc-aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  |||||   |||||||||||| ||||| ||| | ||||||| |||||||||    
T  4629917 taaagataagcaatgaaagaaaggaacaaacacatcaaagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatc 4630016  T
Q  293 cacta 297  Q
    |||||    
T  4630017 cacta 4630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 10231895 - 10231979
Alignment:
Q  95 gaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatc 178  Q
    |||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||    
T  10231895 gaacaaaattgcaatttcacacgttttggttgaaaaataaaaagaaatcgaaacatctttgaaatactatgaaattttgcagatc 10231979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 22963667 - 22963766
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||||||| |||||||| ||||||||||||| |||||||||||| |||||| | | |||||||||||||||| ||||| |||||||  ||||||||||||    
T  22963667 agataagctatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatgaccaaatct-ggggagagagcagccctccaatccact 22963765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 23824726 - 23824627
Alignment:
Q  197 agataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccact 296  Q
    |||||||| |||||||| ||||||||||||| |||||||||||| |||||| | | |||||||||||||||| ||||| |||||||  ||||||||||||    
T  23824726 agataagctatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatgaccaaatct-ggggagagagcagccctccaatccact 23824628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 5017601 - 5017515
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagca 281  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | || ||||||||| ||||| ||||| ||||||    
T  5017601 aaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtcaaatatgacctaatctaggggagagagca 5017515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 21356000 - 21356103
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| || |||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||| ||| ||||||| |||||||||    
T  21356000 aaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatc 21356098  T
Q  293 cacta 297  Q
    |||||    
T  21356099 cacta 21356103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 5572374 - 5572271
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcc 293  Q
    |||| ||||||| ||||||| | ||||||||||| |||||||||||| ||| || | |||||||||||| ||||| ||||| |||||||  |||||||||    
T  5572374 taaatataagcagtgaaagaaatgaacaaacacaccaagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatcc 5572275  T
Q  294 acta 297  Q
    ||||    
T  5572274 acta 5572271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 18232809 - 18232896
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagca 281  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||  ||  | | |||||||||||| ||||||||||| ||||||    
T  18232809 taaagataagcgatgaaagagaggaacaaacacaccaagattgttgactcaaatcggtccaatatgacctaatctgggggagagagca 18232896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 28931602 - 28931693
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatctttttg 184  Q
    ||||||||||| ||||||  ||| |||||||| |||||| ||||||||||||||  ||||||||||||||||||| |||| ||||| |||||    
T  28931602 ggaacaaaattgcaatttcgcacattttggttcaaaaattaaaataaatcgaaatgtctttgaaatgctacgaaactttgcagatccttttg 28931693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 23217522 - 23217600
Alignment:
Q  94 ggaacaaaattacaatttaacacgttttggttaaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttg 172  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||  ||||||||| |||||| || |||| ||||    
T  23217522 ggaacaaaatttcaatttttcacgttttggttaaaaataaaaataaattaaaacatcttcgaaatgatatgaaactttg 23217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 21801482 - 21801374
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa-gat-----tgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctc 287  Q
    |||||||||| ||||||||| ||||||||||||| ||| |||     |||||| ||||||   |||||||||||| |||||||||||  |||||| ||||    
T  21801482 taaagataagtaatgaaagaaaggaacaaacacaccaaagataaaagtgttga-ccagttcagtccaatatgacctaatctgggggagcgagcagctctc 21801384  T
Q  288 caatccacta 297  Q
    ||||||||||    
T  21801383 caatccacta 21801374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 14737660 - 14737597
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  14737660 aagattgttgatccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 14737597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 11797094 - 11797157
Alignment:
Q  100 aaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgcta 162  Q
    |||| |||||||  ||||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  11797094 aaataacaatttcgcacgtttcggttgaaaaataaaaataaatcgagacatatttgaaatgcta 11797157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 22708982 - 22709085
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaaga--ttgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    ||||||||||||| ||||| || ||||||||||| ||| |  ||||||| | |||| | | |||||||| | ||||||||||| ||||||| ||||||||    
T  22708982 taaagataagcaa-gaaag-gaagaacaaacacaccaaaaaattgttgacctagttcggttcaatatgatctaatctgggggagagagcagctctccaat 22709079  T
Q  292 ccacta 297  Q
    ||||||    
T  22709080 ccacta 22709085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 33336027 - 33335963
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | ||||| ||||| ||||||||||| ||||||| |||||||||||    
T  33336027 caagattgttgacccagttc-agccaatgtgacctaatctgggggagagagcagctctccaatcca 33335963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 14742520 - 14742457
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | ||||||||||| ||| ||||||| ||||||| |||||||||||    
T  14742520 aagattgttgacccagttc-agccaatatgacctaatttgggggagagagcagctctccaatcca 14742457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 22010781 - 22010718
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  22010781 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 22010718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 85648 - 85748
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||| ||||||   |||||||||||| ||||||||||| ||||| | |||||||||||    
T  85648 aaagataagcaatgaaagaaaagaacaaacacatctagattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatcca 85747  T
Q  295 c 295  Q
    |    
T  85748 c 85748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 8553 - 8449
Alignment:
Q  194 taaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaat 291  Q
    |||||||||||||||||||| || |||||||||| |||  ||||||||| |||||| | |||||||||||| ||||||||||| ||||||| ||||||||    
T  8553 taaagataagcaatgaaaga-agaaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaat 8455  T
Q  292 ccacta 297  Q
    ||||||    
T  8454 ccacta 8449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 8615 - 8699
Alignment:
Q  95 gaacaaaattacaatttaacacgttttggtt-aaaaataaaaataaatcgaaacatctttgaaatgctacgaaattttgtagatc 178  Q
    |||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||    
T  8615 gaacaaaattgcaatttcacacgttttggttgaaaaataaaaagaaatcgaaacatctttgaaatactatgaaattttgcagatc 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 44094 - 43991
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||| | | ||||||||| ||||||| |||||||||    
T  44094 aaagataagcaatgaaaga-aggaacaaacacaccaaaagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatc 43996  T
Q  293 cacta 297  Q
    |||||    
T  43995 cacta 43991  T

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Target: scaffold0087; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 36966 - 36862
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||| ||||| ||||||||||||| |||  ||||||||| |||||| | |||||||||||| ||||| ||| | ||||||| || |||| |    
T  36966 aaagataagcaataaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacc 36867  T
Q  293 cacta 297  Q
    |||||    
T  36866 cacta 36862  T

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Target: scaffold0098 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 45217 - 45320
Alignment:
Q  195 aaagataagcaatgaaagagaggaacaaacacatcaa--gattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatc 292  Q
    ||||||||||||||||||| | ||||||||||| |||  |||||||||  ||||| | | |||||||||| ||||||||||| ||||||| |||||||||    
T  45217 aaagataagcaatgaaaga-atgaacaaacacaccaaaagattgttgactcagttcggttcaatatgacctaatctgggggagagagcagctctccaatc 45315  T
Q  293 cacta 297  Q
    |||||    
T  45316 cacta 45320  T

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Target: scaffold0188 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 18048 - 17982
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  18048 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 17982  T

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Target: scaffold0188; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 24141 - 24075
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatccacta 297  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| ||||||||||||||    
T  24141 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatccacta 24075  T

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Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 363 - 427
Alignment:
Q  229 caagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    |||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  363 caagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 427  T

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Target: scaffold0355 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 9726 - 9663
Alignment:
Q  230 aagattgttgatccagtttgatccaatatgaccaaatctgggggacagagcagttctccaatcca 294  Q
    ||||||||||| ||||||  | |||||||| || ||||||||||| ||||||| |||||||||||    
T  9726 aagattgttgacccagttc-agccaatatggcctaatctgggggagagagcagctctccaatcca 9663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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