View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17117_high_38 (Length: 393)
Name: NF17117_high_38
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17117_high_38 |
 |  |
|
| [»] scaffold0178 (1 HSPs) |
 |  |  |
|
| [»] scaffold0472 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-162; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 16271990 - 16272368
Alignment:
| Q |
1 |
ttatatcaaatttatatgttgttggtgtttgaaaaagataatcatagtttattataatttgaaagttacgtattttacagctataannnnnnnnnnn-ga |
99 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || |
|
|
| T |
16271990 |
ttatatcaaatttatatgttgttgctgtttgaaaaagataatcatagtttattacaatttgaaagttacgtattttacaactataattttttttttttga |
16272089 |
T |
 |
| Q |
100 |
agaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatctcaaagttacaata |
199 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16272090 |
agaatcaaaaataaaatatattaccaaaaaacatgtaattgttgaagcacaagccgtgccataacaatcacgaaaagatcagaatctcaaagttacaata |
16272189 |
T |
 |
| Q |
200 |
aaatcaatcgatgcccatacatacaatttgaaatagtttgcagctgtaattttaatcaaataattttctacaatttgaaagttacaatgtcaatacttat |
299 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
16272190 |
aaatcaatcgatacccatacatacaatttgaaatagtttgcagctataactttaatcaaataatttgctacaatttgaaagttacaatgtcaatagttat |
16272289 |
T |
 |
| Q |
300 |
aattttagtcaaaataaatttgttgtaaaaaataaatttataatttacatactttaacgcaatgaaaatgagcacatac |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
16272290 |
aattttagtcaaaataaatttgttgtaaaaaataaatttataatttacatactttaacacaatgaaaataagcacatac |
16272368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 16272418 - 16272498
Alignment:
| Q |
297 |
tataattttagtcaaaataaatttgttgtaaaaaataaatttataatttacatactttaacgcaatgaaaatgagcacata |
377 |
Q |
| |
|
||||||||||||||||||| | || ||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
16272418 |
tataattttagtcaaaatataatttttgtaaaaactaagtttataatttacatactttaacacaatgaaaatgaggacata |
16272498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 49094374 - 49094446
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
49094374 |
gaagaaacaaaaatgaaatatattactataaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
49094446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 43387843 - 43387914
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43387843 |
aagaaacaaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
43387914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 16918467 - 16918394
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| ||||||||||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
16918467 |
caaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgtcaaaacaatcacaaaaagat |
16918394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 37192556 - 37192505
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc |
185 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
37192556 |
gtaattgttgaagtacaagacgtgccctaacaatcacgaaaagatcaaaatc |
37192505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 25560597 - 25560642
Alignment:
| Q |
133 |
tgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
25560597 |
tgtaattgttgaagcacaagacgtgctataacaatcacggaaagat |
25560642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 15568246 - 15568325
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
|||||| | |||||||| |||||||||| || | |||||||| |||||||||| |||||||||||||||||| ||||| |
|
|
| T |
15568246 |
gaagaaaccaaaatgaattatattaccatgaacaacgtaattgtcgaagcacaaggcgtgccataacaatcacggaaaga |
15568325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 26206971 - 26206892
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||||||||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
26206971 |
aagaaacaaaaatggaatatattactatgaatactgtaattgttgaagcacaagacatgccaaaacaatcacaaaaagat |
26206892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 37298127 - 37298081
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
37298127 |
gtaatagttgaagcacaagaagtgccataacaatcgcgaaaagatca |
37298081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 25618935 - 25619061
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc---tcaaagttac |
195 |
Q |
| |
|
||||| |||||||| |||||||||| | ||| | |||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||| | |||| |
|
|
| T |
25618935 |
aagaaacaaaaatggaatatattactataaacaacgtaattgttgaagcacaagacgtgtcataccaatcacgaaaagatcaaaatcctgtcagaattac |
25619034 |
T |
 |
| Q |
196 |
aataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
| ||| ||||||||| |||||||||| |
|
|
| T |
25619035 |
atcaaagtcaatcgatacccatacata |
25619061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 37254234 - 37254360
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc---tcaaagttac |
195 |
Q |
| |
|
||||| |||||||| |||||||||| | ||| |||||| ||||||| ||| |||||||||||||||||||||||||||| |||| ||||| |||| |
|
|
| T |
37254234 |
aagaaacaaaaatggaatatattactatgaaaaccgtaattattgaagcccaaaacgtgccataacaatcacgaaaagatcaaaatcctgtcaaaattac |
37254333 |
T |
 |
| Q |
196 |
aataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
| ||| ||||||||| |||||||||| |
|
|
| T |
37254334 |
atcaaagtcaatcgatacccatacata |
37254360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 23911301 - 23911374
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||||||||||||||||| ||||| | ||||||||||| |||||||||||||| ||||||||| ||||||| |
|
|
| T |
23911301 |
caaaaatgaaatatattactaaaaacactataattgttgaaacacaagacgtgccaaaacaatcacaaaaagat |
23911374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 18530021 - 18530067
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
18530021 |
gtaattgttgaagcacaaaacgtgtcataacaattacgaaaagatca |
18530067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 14439267 - 14439351
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatctcaaagttacaataaaatcaatcgatgcccata |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||| ||| |||||||||||||| |
|
|
| T |
14439267 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcacaaccccaaaattacatcaaagataatcgatgcccata |
14439351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 11000579 - 11000528
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc |
185 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| ||||||||| |||| |
|
|
| T |
11000579 |
gtaattgttgaagcacaagacgtgtcataacaatcacaaaaagatcacaatc |
11000528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 12645021 - 12645091
Alignment:
| Q |
107 |
aaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
|||||||| |||||||||| || | ||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
12645021 |
aaaatgaattatattaccatgaacaacgtaattgttgaagcacaaggcgtgccataacaatcacggaaaga |
12645091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 20002229 - 20002275
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20002229 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
20002275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 12697288 - 12697360
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
|||||| |||||||| |||||||||| | ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12697288 |
gaagaaacaaaaatggaatatattacgataaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
12697360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 5142933 - 5143021
Alignment:
| Q |
137 |
attgttgaagcacaagacgtgccataacaatcacgaaaagatcagaa---tctcaaagttacaataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||| || | ||||| ||||| ||| ||||||||| |||||||||| |
|
|
| T |
5142933 |
attgttgaagcacaagacgtgccataacaattatgaaaagatcaaaattctgtcaaaattacatcaaagtcaatcgatacccatacata |
5143021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 4548884 - 4548804
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||| |||||||| |||||||||| | || ||||||||||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
4548884 |
gaagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgtcaaaacaatcacaaaaagat |
4548804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 5147353 - 5147393
Alignment:
| Q |
137 |
attgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5147353 |
attgttgaagcacaagacgtgccataacaatcaagaaaaga |
5147393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 8360603 - 8360683
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||| |||||||| |||||||||| | || ||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
8360603 |
gaagaaacaaaaatggaatatattactatgaacattgtaattgttgaagcacaagatgtgccaaaacaatcaccaaaagat |
8360683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 41973615 - 41973687
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
|||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41973615 |
gaagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
41973687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 24506294 - 24506215
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || ||| |||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
24506294 |
aagaaacaaaaatggaatatattactatgaacactgtgattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
24506215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 55726257 - 55726178
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
|||||| | |||||||| |||||||||| || | |||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
55726257 |
gaagaaaccaaaatgaattatattaccatgaacaacataattgttgaagcacaaggcgtgccataacaatcacggaaaga |
55726178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 19468522 - 19468480
Alignment:
| Q |
133 |
tgtaattgttgaagcacaagacgtgccataacaatcacgaaaa |
175 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
19468522 |
tgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaa |
19468480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 2822701 - 2822622
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
|||||| | |||||||||||||||| ||| || ||||||||| |||||||| ||||||| |||||||||||||||| |
|
|
| T |
2822701 |
gaagaaactaaaatgaaatatattaacaagaatatcgtaattgttatagcacaaggcgtgccaaaacaatcacgaaaaga |
2822622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 46145185 - 46145222
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacg |
171 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
46145185 |
gtaattgttgcagcacaagatgtgccataacaatcacg |
46145222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 20823778 - 20823851
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
20823778 |
caaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
20823851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 2169851 - 2169897
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2169851 |
gtaattgttgaagcataagacgtgccataacaatcacgaaaagatca |
2169897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 29733605 - 29733535
Alignment:
| Q |
107 |
aaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
29733605 |
aaaatgaaatatattaccaaaaataccgtaattgttatagcacaagacgtgccaaaacaatcacgaaaaga |
29733535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 43269926 - 43270007
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
||||| |||||||| |||||||||| | || ||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
43269926 |
aagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgtcataacaattacgaaaagatca |
43270007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 28415629 - 28415693
Alignment:
| Q |
107 |
aaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacg |
171 |
Q |
| |
|
|||||||| ||||||||||| || | |||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
28415629 |
aaaatgaattatattaccaagaacaacgtaattgttgcagcacaaggcgtgccataacaatcacg |
28415693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 17698958 - 17699037
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || ||||||||||||||||||| |||||||| ||||||||| ||||||| |
|
|
| T |
17698958 |
aagaaacaaaaatggaatatattactatgaatactgtaattgttgaagcacaaaacgtgccaaaacaatcacaaaaagat |
17699037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 10565589 - 10565519
Alignment:
| Q |
107 |
aaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaaga |
177 |
Q |
| |
|
|||||||| |||||||||| || | ||||||||||||||||||| ||| |||||||||||||| ||||| |
|
|
| T |
10565589 |
aaaatgaattatattaccacgaacaacgtaattgttgaagcacaaggcgttccataacaatcacggaaaga |
10565519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 13199607 - 13199725
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc---tcaaagttacaataaa |
201 |
Q |
| |
|
|||||||||| ||||||| || ||| | ||||||||||||||||||| |||||| ||||||||||| ||||| || ||| ||||| |||||| ||| |
|
|
| T |
13199607 |
caaaaatgaattatattatcataaataacgtaattgttgaagcacaaggcgtgcc-taacaatcacggaaagagcaacatcctgtcaaa-ttacaacaaa |
13199704 |
T |
 |
| Q |
202 |
atcaatcgatgcccatacata |
222 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
13199705 |
gtcaatcgatgctcatacata |
13199725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 25089863 - 25089939
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaa |
174 |
Q |
| |
|
|||||| | |||||||| |||||||| || || |||||||||| |||||||| ||||||| ||||||||||||| |
|
|
| T |
25089863 |
gaagaaactaaaatgaattatattactaagaacactgtaattgttatagcacaaggcgtgccaaaacaatcacgaaa |
25089939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 17579738 - 17579665
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
17579738 |
caaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
17579665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 20883658 - 20883568
Alignment:
| Q |
135 |
taattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaa---tctcaaagttacaataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| || | ||||| ||||| ||| ||||||||| |||||||||| |
|
|
| T |
20883658 |
taattgttgaagcacaagacgtgccatatcaatcacgaaaagatcaaaaccctatcaaaattacatcaaagtcaatcgatacccatacata |
20883568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 14514214 - 14514141
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| ||||||||||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
14514214 |
caaaaatggaatatattactaaaaatactgtaattgttgaagcacaagacgtggcaaaacaatcacaaaaagat |
14514141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 214878 - 214958
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
214878 |
gaagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
214958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 10929968 - 10929889
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
10929968 |
aagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
10929889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 11461925 - 11462017
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacg-aaaagatcagaatc---tcaaagttacaataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||| |||| |||| ||||| ||||| ||| ||||||||| |||||||||| |
|
|
| T |
11461925 |
gtaattgatgaagcacaagacgtgccataacaatcacgaaaaaaatcaaaatcctgtcaaaattacatcaaagtcaatcgatacccatacata |
11462017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 21630739 - 21630694
Alignment:
| Q |
133 |
tgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
21630739 |
tgtaattgttgaagcacaagacatgccaaaacaatcacaaaaagat |
21630694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 34714199 - 34714120
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaaca-tgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| || |||| ||||| ||||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
34714199 |
aagaaacaaaaatggaatatattac-aatgaacactgtaagtgttgaagcacaagacgtggcaaaacaatcaccaaaagat |
34714120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 8300840 - 8300767
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
8300840 |
caaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
8300767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 25858082 - 25858009
Alignment:
| Q |
105 |
caaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
25858082 |
caaaaatgtaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
25858009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 10773961 - 10774011
Alignment:
| Q |
133 |
tgtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaa |
183 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||| |||| |
|
|
| T |
10773961 |
tgtaattgttgaagcacaagacgtgccaaaacaatcaccaaaagattagaa |
10774011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 18359719 - 18359673
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatca |
180 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
18359719 |
gtaattgttgaagcacaagacgtgccataacaattacgaaaatatca |
18359673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 33386038 - 33385959
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
33386038 |
aagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcataagacgtgccaaaacaatcacaaaaagat |
33385959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 27766553 - 27766598
Alignment:
| Q |
133 |
tgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||||||||| ||||||||||||| || ||||||||| ||||||| |
|
|
| T |
27766553 |
tgtaattgttgtagcacaagacgtgtcaaaacaatcacaaaaagat |
27766598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 7031680 - 7031608
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
|||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7031680 |
gaagaaacaaaaatggaatatattactaaaaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
7031608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 11203294 - 11203366
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
|||||| |||||||| |||||||||| | ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11203294 |
gaagaaacaaaaatggaatatattactataaacactgtaattgttgaagcacaagacgtgccacaacaatcac |
11203366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 30696007 - 30695928
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
30696007 |
aagaaacaaaaatggaatatattactatgaacattgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
30695928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 35215000 - 35214949
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc |
185 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||| |||| |
|
|
| T |
35215000 |
gtaattgttgaagcacaagatgtgtcataacaatcacgaaaagatcacaatc |
35214949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 1680749 - 1680661
Alignment:
| Q |
136 |
aattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc---tcaaagttacaataaaatcaatcgatgcccatacata |
222 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
1680749 |
aattgttgaagcacaaggcgtgccataacaatcacagaaagagcaacatcctgtcaaa-ttacaacaaagtcaatcgatgcccatacata |
1680661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 12342891 - 12342820
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcac |
170 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12342891 |
aagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgccaaaacaatcac |
12342820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 29524410 - 29524339
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatca |
169 |
Q |
| |
|
|||||| |||||||| |||||||||| | || |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29524410 |
gaagaaacaaaaatggaatatattactatgaacactgtaattgttgaagcacaagacgtgccacaacaatca |
29524339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 33496024 - 33496103
Alignment:
| Q |
99 |
aagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
||||| |||||||| |||||||||| | || |||||| ||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
33496024 |
aagaaacaaaaatggaatatattactatgaacactgtaatggttgaagcacaagacgtgccaaaacaatcacaaaaagat |
33496103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 19890190 - 19890242
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatct |
186 |
Q |
| |
|
||||||||| |||| ||||||||||||| |||||| |||||||||| ||||| |
|
|
| T |
19890190 |
gtaattgttagagcataagacgtgccatagcaatcatgaaaagatcaaaatct |
19890242 |
T |
 |
Back To:
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Target: scaffold0178 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0178
Description:
Target: scaffold0178; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 16933 - 16882
Alignment:
| Q |
134 |
gtaattgttgaagcacaagacgtgccataacaatcacgaaaagatcagaatc |
185 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
16933 |
gtaattgttgaagcacaagacgtgccgtaacaatcacgaaaagatcaaaatc |
16882 |
T |
 |
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Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0472
Description:
Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 7475 - 7395
Alignment:
| Q |
98 |
gaagaatcaaaaatgaaatatattaccaaaaaacatgtaattgttgaagcacaagacgtgccataacaatcacgaaaagat |
178 |
Q |
| |
|
|||||| |||||||||||||||||| | || |||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
7475 |
gaagaaacaaaaatgaaatatattattatgaacactgtaattgttgaagcacaagacgtgccaaaacaatcacaaaaagat |
7395 |
T |
 |
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