View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17117_high_91 (Length: 233)
Name: NF17117_high_91
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17117_high_91 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 37862634 - 37862431
Alignment:
| Q |
17 |
aaaatactagcatgtatagaaactaagatcatcgatgatccatggctagaagtctctcg-tggtaatgatcgtaaaacacaaataaaaacgggtaatgaa |
115 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37862634 |
aaaatactagcatgtatagaaactaagatcatcaatgatccatggctagaagtctctcgatggtaatgatcgtaaaacacaaataaaaacgggtaatgaa |
37862535 |
T |
|
| Q |
116 |
catatattgtcttgtagttctttctcgacgaatattgtttatgtcttagacactcttcaggtgagcataaaagacaatatatgttatatattgacatcat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37862534 |
catatattgtcttgtagttctttctcgacgaatattgtttatgtcttagacactcttcaggtgagcataaaagacaatatatgttatatattgacatcat |
37862435 |
T |
|
| Q |
216 |
aagt |
219 |
Q |
| |
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|||| |
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|
| T |
37862434 |
aagt |
37862431 |
T |
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